Cucsa.126860 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.126860
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionEthylene-responsive transcription factor, putative
Locationscaffold01017 : 682621 .. 683103 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACTCGCGAAGGTCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAAATACGCGACCCTTGGAAGAAAACCCGTGTTTGGTTAGGCACTTTCGATACTCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCCGTTCCCTCCGCGGCTCCAAAGCTAAAACCAACTTCCCTCCTCCCCTCCCTGGTCTCTCCCTCGACCTCAACGTCTCCGGACCTTGGCCCACACCTACCTCTGCACCCCCTTGTTCATCCTCCTCCTCCTCCCCCTCCCCCTCCTCCACTCGTTTTCTCCTCGGCGATTTCCTCCGTCACGGCGTCAGAAACGATATATGTAATCTCAATGTGGATGCCTCTCCGGTTCTTGTGGACTCAAGCGCTTCGGGTTCTTCCACCGCTTCGGCGTCGTTTATTGGTCACGTCCGACGTGGCCTCCCTTTTGATCTCAACGAGCCTCCACCG

mRNA sequence

ATGGCTTCCACTCGCGAAGGTCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAAATACGCGACCCTTGGAAGAAAACCCGTGTTTGGTTAGGCACTTTCGATACTCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCCGTTCCCTCCGCGGCTCCAAAGCTAAAACCAACTTCCCTCCTCCCCTCCCTGGTCTCTCCCTCGACCTCAACGTCTCCGGACCTTGGCCCACACCTACCTCTGCACCCCCTTGTTCAtcctcctcctcctccccctccccctcctccACTCGTTTTCTCCTCGGCGATTTCCTCCGTCACGGCGTCAGAAACGATATATGTAATCTCAATGTGGATGCCTCTCCGGTTCTTGTGGACTCAAGCGCTTCGGGTTCTTCCACCGCTTCGGCGTCGTTTATTGGTCACGTCCGACGTGGCCTCCCTTTTGATCTCAACGAGCCTCCACCG

Coding sequence (CDS)

ATGGCTTCCACTCGCGAAGGTCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAAATACGCGACCCTTGGAAGAAAACCCGTGTTTGGTTAGGCACTTTCGATACTCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCCGTTCCCTCCGCGGCTCCAAAGCTAAAACCAACTTCCCTCCTCCCCTCCCTGGTCTCTCCCTCGACCTCAACGTCTCCGGACCTTGGCCCACACCTACCTCTGCACCCCCTTGTTCATCCTCCTCCTCCTCCCCCTCCCCCTCCTCCACTCGTTTTCTCCTCGGCGATTTCCTCCGTCACGGCGTCAGAAACGATATATGTAATCTCAATGTGGATGCCTCTCCGGTTCTTGTGGACTCAAGCGCTTCGGGTTCTTCCACCGCTTCGGCGTCGTTTATTGGTCACGTCCGACGTGGCCTCCCTTTTGATCTCAACGAGCCTCCACCG

Protein sequence

MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICNLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP
Homology
[Close]
BLAST of Cucsa.126860 vs. Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-36
Identity = 100/193 (51.81%), Postives = 110/193 (56.99%), Query Frame = 1 

Query: 1   MAST---REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLPGLSLDLNVSGPWPTPT----------------SAPPCSSSSSSPSPSS 120
            KAKTNFP P   LSLDLN     P+                  +APP    SS      
Sbjct: 61  IKAKTNFPSP---LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQH 120

Query: 121 TRFLLGDFLRHGVRNDICNLNVDASPVLVDSSASGSSTASASF--IGH-----------V 162
            R     FLR GV ND  +        L  +S+  ++T+S  +  +G            V
Sbjct: 121 HRI----FLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPVTV 180

[Close]
BLAST of Cucsa.126860 vs. Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.2e-26
Identity = 80/191 (41.88%), Postives = 98/191 (51.31%), Query Frame = 1 

Query: 4   TREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTN 63
           ++E  +RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AAR+LRG KAKTN
Sbjct: 23  SKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTN 82

Query: 64  FPPPLPG--------------------LSLDLNVSGPWPTPTSAPPCSSSSSSPSP---- 123
           FP P                          D  +    PT +S      S S P P    
Sbjct: 83  FPLPYAHHHQFNQGHNPNNDPFVDSRFYPQDNPIISQRPTSSSMSSTVESFSGPRPPPAP 142

Query: 124 -SSTRFLLGDFLRH-GVRNDICNLNVDASPVLVD-------SSASGSSTASASFIGHVRR 162
              T      + R   V  D C+ + D+S  +VD       +     + AS+SF    R+
Sbjct: 143 RQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSF----RK 202

[Close]
BLAST of Cucsa.126860 vs. Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 58/75 (77.33%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 5   REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
           +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65  PPPLPGLSLDLNVSG 80
             PLPG S  +N  G
Sbjct: 89  --PLPGESTTVNDGG 101

[Close]
BLAST of Cucsa.126860 vs. Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-24
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 3  STREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NFP-----PPLPGL 72
          NFP     PP P L
Sbjct: 82 NFPIDSSSPPPPNL 95

[Close]
BLAST of Cucsa.126860 vs. Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.6e-24
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 1 

Query: 5  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23 KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 65 PPP 68
          P P
Sbjct: 83 PSP 85

[Close]
BLAST of Cucsa.126860 vs. TrEMBL
Match: A0A0A0LSE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075030 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.6e-89
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120
           KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120

Query: 121 LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 162
           LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP
Sbjct: 121 LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 161

[Close]
BLAST of Cucsa.126860 vs. TrEMBL
Match: A0A067JE07_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21469 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 103/171 (60.23%), Postives = 115/171 (67.25%), Query Frame = 1 

Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MAS+REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG+KA
Sbjct: 1   MASSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKA 60

Query: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120
           KTNFP P   LSLDLN            P  S     S +S RF LG+FL+ GV  +I  
Sbjct: 61  KTNFPAPATALSLDLNA-----------PSDSHHRWSSTASHRFALGEFLQTGVFKEISF 120

Query: 121 LNVDASPVLVDSSASGSSTASA----------SFIGHVRRGLPFDLNEPPP 162
               +  V  +S+ +G   +S           SF+G VRRGLP DLNEPPP
Sbjct: 121 HGESSGSVKNESAVAGGGGSSVTPLPENGGQPSFLGIVRRGLPIDLNEPPP 160

[Close]
BLAST of Cucsa.126860 vs. TrEMBL
Match: B9RBB0_RICCO (Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_1673780 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.1e-45
Identity = 101/169 (59.76%), Postives = 115/169 (68.05%), Query Frame = 1 

Query: 2   ASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 61
           ++TREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG+KAK
Sbjct: 9   STTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAK 68

Query: 62  TNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICNL 121
           TNFP P   LSLDLNV      P+         +S SPS  RF LG+FL+ GV  +    
Sbjct: 69  TNFPAPPTALSLDLNV------PSDHSHHHHRWASASPSGHRFALGEFLQTGVLKEFTFK 128

Query: 122 NVDASPVL---------VDSSASGSSTASASFIGHVRRGLPFDLNEPPP 162
              +S  +         V  +    ++  ASF+G VRRGLP DLNEPPP
Sbjct: 129 GEPSSSQMKNETVVVPGVGGAPLPENSGQASFLGIVRRGLPIDLNEPPP 171

[Close]
BLAST of Cucsa.126860 vs. TrEMBL
Match: A0A022QNG6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015643mg PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-44
Identity = 99/163 (60.74%), Postives = 106/163 (65.03%), Query Frame = 1 

Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG+KA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKA 60

Query: 61  KTNFPPPLPGLSLDLNVSGP--WPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDI 120
           KTNFP    GLSLDLN+     W  P                S R ++ DFL  GV  D+
Sbjct: 61  KTNFPAAPSGLSLDLNLPSDHRWIAP----------------SGRVMIHDFLHTGVLKDV 120

Query: 121 CNLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 162
            +   DA         +      A F G VRRGLP DLNEPPP
Sbjct: 121 SSQGNDAQAAATIGPTAAEINPPAMFFGIVRRGLPIDLNEPPP 147

[Close]
BLAST of Cucsa.126860 vs. TrEMBL
Match: K4B909_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-44
Identity = 104/167 (62.28%), Postives = 116/167 (69.46%), Query Frame = 1 

Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG+KA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKA 60

Query: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAP-----PCSSSSSSPSPSSTRFLLGDFLRHGVR 120
           KTNFPPP P          P P P+SAP        S     SPS  R ++G+FL+ G  
Sbjct: 61  KTNFPPPPP----------PPPQPSSAPLTLDLNLPSDHRWTSPSGRRLMIGEFLQVGPP 120

Query: 121 NDICNLNVDASPVLVDSSASGSST-ASASFIGHVRRGLPFDLNEPPP 162
            ++ NL     PV V + A  +   A+A + G VRRGLP DLNEPPP
Sbjct: 121 PEL-NL-----PVTVAAPAKENDVGAAAMYFGIVRRGLPIDLNEPPP 151

[Close]
BLAST of Cucsa.126860 vs. TAIR10
Match: AT1G28360.1 (AT1G28360.1 ERF domain protein 12)

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-37
Identity = 100/193 (51.81%), Postives = 110/193 (56.99%), Query Frame = 1 

Query: 1   MAST---REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLPGLSLDLNVSGPWPTPT----------------SAPPCSSSSSSPSPSS 120
            KAKTNFP P   LSLDLN     P+                  +APP    SS      
Sbjct: 61  IKAKTNFPSP---LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQH 120

Query: 121 TRFLLGDFLRHGVRNDICNLNVDASPVLVDSSASGSSTASASF--IGH-----------V 162
            R     FLR GV ND  +        L  +S+  ++T+S  +  +G            V
Sbjct: 121 HRI----FLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPVTV 180

[Close]
BLAST of Cucsa.126860 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-26
Identity = 58/75 (77.33%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 5   REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
           +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65  PPPLPGLSLDLNVSG 80
             PLPG S  +N  G
Sbjct: 89  --PLPGESTTVNDGG 101

[Close]
BLAST of Cucsa.126860 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-25
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 3  STREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NFP-----PPLPGL 72
          NFP     PP P L
Sbjct: 82 NFPIDSSSPPPPNL 95

[Close]
BLAST of Cucsa.126860 vs. TAIR10
Match: AT3G15210.1 (AT3G15210.1 ethylene responsive element binding factor 4)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 62/102 (60.78%), Postives = 71/102 (69.61%), Query Frame = 1 

Query: 3   STREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           + +E  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63  NFPPPLPGLSLDLNVSG--PWPTPTSAPPCSSSSSSPSPSST 103
           NFP  L  LS     +G    P+ +S   C+S  +   PS+T
Sbjct: 79  NFPTFLE-LSDQKVPTGFARSPSQSSTLDCASPPTLVVPSAT 119

[Close]
BLAST of Cucsa.126860 vs. TAIR10
Match: AT1G28370.1 (AT1G28370.1 ERF domain protein 11)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 76/167 (45.51%), Postives = 90/167 (53.89%), Query Frame = 1 

Query: 4   TREGH---YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 63
           T EG+   YRGVRKRPWGRYAAEIRDP+KK+RVWLGTFDTPEEAA AYD  A   RG+KA
Sbjct: 12  TNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKA 71

Query: 64  KTNFP---PPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRND 123
           KTNFP        LSL  ++S      +S P  +  S S S                R  
Sbjct: 72  KTNFPCYNINAHCLSLTQSLSQSSTVESSFPNLNLGSDSVSS---------------RFP 131

Query: 124 ICNLNVDASPVLVDS-SASGSSTASASFIGHVRRG--LPFDLNEPPP 162
              + V A  ++ D  S S SS+     + +  R   L  DLN PPP
Sbjct: 132 FPKIQVKAGMMVFDERSESDSSSVVMDVVRYEGRRVVLDLDLNFPPP 163

[Close]
BLAST of Cucsa.126860 vs. NCBI nr
Match: gi|449457761|ref|XP_004146616.1| (PREDICTED: ethylene-responsive transcription factor 12 [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 2.3e-89
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120
           KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120

Query: 121 LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 162
           LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP
Sbjct: 121 LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 161

[Close]
BLAST of Cucsa.126860 vs. NCBI nr
Match: gi|659068110|ref|XP_008442801.1| (PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 2.7e-82
Identity = 154/162 (95.06%), Postives = 156/162 (96.30%), Query Frame = 1 

Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120
           KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS  S SS RFLLGDFLRHGVRND+CN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS--SSSSARFLLGDFLRHGVRNDMCN 120

Query: 121 LNVD-ASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 162
           LNVD ASPVLVD+SAS SSTASASFIGHVRRGLPFDLNEPPP
Sbjct: 121 LNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPP 160

[Close]
BLAST of Cucsa.126860 vs. NCBI nr
Match: gi|802786336|ref|XP_012091650.1| (PREDICTED: ethylene-responsive transcription factor 12 [Jatropha curcas])

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 103/171 (60.23%), Postives = 115/171 (67.25%), Query Frame = 1 

Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MAS+REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG+KA
Sbjct: 1   MASSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKA 60

Query: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120
           KTNFP P   LSLDLN            P  S     S +S RF LG+FL+ GV  +I  
Sbjct: 61  KTNFPAPATALSLDLNA-----------PSDSHHRWSSTASHRFALGEFLQTGVFKEISF 120

Query: 121 LNVDASPVLVDSSASGSSTASA----------SFIGHVRRGLPFDLNEPPP 162
               +  V  +S+ +G   +S           SF+G VRRGLP DLNEPPP
Sbjct: 121 HGESSGSVKNESAVAGGGGSSVTPLPENGGQPSFLGIVRRGLPIDLNEPPP 160

[Close]
BLAST of Cucsa.126860 vs. NCBI nr
Match: gi|1009109495|ref|XP_015890508.1| (PREDICTED: ethylene-responsive transcription factor 12 [Ziziphus jujuba])

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45
Identity = 108/176 (61.36%), Postives = 119/176 (67.61%), Query Frame = 1 

Query: 2   ASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 61
           AS+REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG+KAK
Sbjct: 6   ASSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAK 65

Query: 62  TNFPPPL-PGLSLDLNV-SGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDIC 121
           TNFP P+  GLSLDLN+ SG W                S  S+R +LG+FL+ GV  DI 
Sbjct: 66  TNFPAPVTAGLSLDLNLPSGHW----------------SSHSSRLVLGEFLQTGVLKDIT 125

Query: 122 NLNVDA--SPVLVDSSASGSS------------TASASFIGHVRRGLPFDLNEPPP 162
              VDA  S       A G S             ++ASF+G VRRGLP DLNEPPP
Sbjct: 126 RCGVDAADSSSPTKHEAPGDSHGCVVGCSAPEIPSTASFLGLVRRGLPIDLNEPPP 165

[Close]
BLAST of Cucsa.126860 vs. NCBI nr
Match: gi|1000983453|ref|XP_015584131.1| (PREDICTED: ethylene-responsive transcription factor 12 [Ricinus communis])

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44
Identity = 101/169 (59.76%), Postives = 115/169 (68.05%), Query Frame = 1 

Query: 2   ASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 61
           ++TREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG+KAK
Sbjct: 9   STTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAK 68

Query: 62  TNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICNL 121
           TNFP P   LSLDLNV      P+         +S SPS  RF LG+FL+ GV  +    
Sbjct: 69  TNFPAPPTALSLDLNV------PSDHSHHHHRWASASPSGHRFALGEFLQTGVLKEFTFK 128

Query: 122 NVDASPVL---------VDSSASGSSTASASFIGHVRRGLPFDLNEPPP 162
              +S  +         V  +    ++  ASF+G VRRGLP DLNEPPP
Sbjct: 129 GEPSSSQMKNETVVVPGVGGAPLPENSGQASFLGIVRRGLPIDLNEPPP 171

The following BLAST results are available for this feature:
BLAST of Cucsa.126860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF81_ARATH2.3e-3651.81Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=... [more]
ERF3_TOBAC6.2e-2641.88Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=... [more]
ERF80_ARATH3.1e-2577.33Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 ... [more]
ERF82_ARATH4.4e-2472.97Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 ... [more]
ERF4_TOBAC7.6e-2482.54Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=... [more]
BLAST of Cucsa.126860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSE4_CUCSA1.6e-89100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075030 PE=4 SV=1[more]
A0A067JE07_JATCU1.1e-4560.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21469 PE=4 SV=1[more]
B9RBB0_RICCO7.1e-4559.76Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_1... [more]
A0A022QNG6_ERYGU2.1e-4460.74Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015643mg PE=4 SV=1[more]
K4B909_SOLLC2.1e-4462.28Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cucsa.126860 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28360.11.3e-3751.81 ERF domain protein 12[more]
AT5G44210.11.7e-2677.33 erf domain protein 9[more]
AT1G50640.12.5e-2572.97 ethylene responsive element binding factor 3[more]
AT3G15210.11.2e-2460.78 ethylene responsive element binding factor 4[more]
AT1G28370.12.8e-2445.51 ERF domain protein 11[more]
BLAST of Cucsa.126860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457761|ref|XP_004146616.1|2.3e-89100.00PREDICTED: ethylene-responsive transcription factor 12 [Cucumis sativus][more]
gi|659068110|ref|XP_008442801.1|2.7e-8295.06PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo][more]
gi|802786336|ref|XP_012091650.1|1.6e-4560.23PREDICTED: ethylene-responsive transcription factor 12 [Jatropha curcas][more]
gi|1009109495|ref|XP_015890508.1|3.5e-4561.36PREDICTED: ethylene-responsive transcription factor 12 [Ziziphus jujuba][more]
gi|1000983453|ref|XP_015584131.1|1.0e-4459.76PREDICTED: ethylene-responsive transcription factor 12 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.126860.1Cucsa.126860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 31..47
score: 4.5E-11coord: 9..20
score: 4.5
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 8..65
score: 4.6
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 8..57
score: 2.3
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 8..71
score: 3.3
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 8..65
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 8..66
score: 1.77
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 1..161
score: 3.6
NoneNo IPR availablePANTHERPTHR31677:SF25SUBFAMILY NOT NAMEDcoord: 1..161
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.126860Csa1G075030Cucumber (Chinese Long) v2cgycuB170
Cucsa.126860MELO3C002624Melon (DHL92) v3.5.1cgymeB198
Cucsa.126860CSPI01G12300Wild cucumber (PI 183967)cgycpiB172
Cucsa.126860CmaCh13G006290Cucurbita maxima (Rimu)cgycmaB0336
Cucsa.126860CmaCh18G003860Cucurbita maxima (Rimu)cgycmaB0338
Cucsa.126860CmoCh13G006500Cucurbita moschata (Rifu)cgycmoB0330
Cucsa.126860Lsi01G002980Bottle gourd (USVL1VR-Ls)cgylsiB193
Cucsa.126860Lsi02G007740Bottle gourd (USVL1VR-Ls)cgylsiB194
Cucsa.126860Cp4.1LG04g02810Cucurbita pepo (Zucchini)cgycpeB0329
Cucsa.126860MELO3C002623.2Melon (DHL92) v3.6.1cgymedB197
Cucsa.126860MELO3C007267.2Melon (DHL92) v3.6.1cgymedB199
Cucsa.126860CsaV3_6G050320Cucumber (Chinese Long) v3cgycucB176
Cucsa.126860CsaV3_1G012490Cucumber (Chinese Long) v3cgycucB174
Cucsa.126860Cla97C03G059350Watermelon (97103) v2cgywmbB202
Cucsa.126860Cla97C01G023060Watermelon (97103) v2cgywmbB197
Cucsa.126860Bhi08G001867Wax gourdcgywgoB235
Cucsa.126860Carg21513Silver-seed gourdcarcgyB1068
Cucsa.126860Carg19152Silver-seed gourdcarcgyB0809
Cucsa.126860Carg14612Silver-seed gourdcarcgyB0182
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.126860Cucsa.046390Cucumber (Gy14) v1cgycgyB004
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.126860Cucurbita pepo (Zucchini)cgycpeB0324
Cucsa.126860Cucurbita pepo (Zucchini)cgycpeB0325
Cucsa.126860Cucurbita pepo (Zucchini)cgycpeB0327
Cucsa.126860Cucurbita pepo (Zucchini)cgycpeB0328
Cucsa.126860Cucurbita pepo (Zucchini)cgycpeB0330
Cucsa.126860Silver-seed gourdcarcgyB0625
Cucsa.126860Silver-seed gourdcarcgyB0716
Cucsa.126860Watermelon (97103) v2cgywmbB199
Cucsa.126860Wax gourdcgywgoB230
Cucsa.126860Cucurbita maxima (Rimu)cgycmaB0339
Cucsa.126860Cucurbita maxima (Rimu)cgycmaB0341
Cucsa.126860Cucurbita moschata (Rifu)cgycmoB0329
Cucsa.126860Cucurbita moschata (Rifu)cgycmoB0332
Cucsa.126860Cucurbita moschata (Rifu)cgycmoB0333
Cucsa.126860Cucurbita moschata (Rifu)cgycmoB0334
Cucsa.126860Cucurbita moschata (Rifu)cgycmoB0335
Cucsa.126860Wild cucumber (PI 183967)cgycpiB175
Cucsa.126860Wild cucumber (PI 183967)cgycpiB176
Cucsa.126860Cucumber (Chinese Long) v2cgycuB172
Cucsa.126860Cucumber (Chinese Long) v2cgycuB173
Cucsa.126860Melon (DHL92) v3.5.1cgymeB201
Cucsa.126860Watermelon (Charleston Gray)cgywcgB201
Cucsa.126860Watermelon (Charleston Gray)cgywcgB202
Cucsa.126860Watermelon (Charleston Gray)cgywcgB205
Cucsa.126860Watermelon (97103) v1cgywmB207
Cucsa.126860Watermelon (97103) v1cgywmB208
Cucsa.126860Watermelon (97103) v1cgywmB209