Cucsa.126640 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.126640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTransmembrane and coiled-coil domain-containing protein 5B
Locationscaffold01017 : 525315 .. 527206 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTTACGGTTTGTAGCGATCTTAAAGGAATAGTGTCGGCGTTGAATCAGATCAAAGAGAGAGCTCATAAGGACGACCTGAAGAAGAATGAAGAGACGATCTCAAGGTAATTTGAGTGGTTTTGTTCGATCGGTACTTTTATTGACTCGAGTCTGGAGCTGCTGAAATTTTGTGTTCTTGTATATTTATTTCCGATTCTCGAATTTCTTTGTACGGCTGCTCATTTATACCTTCGTTTTTCTTCTTCTGGTAGAATTGACCTGGCCTTACTCGTAGTTTGGTTTTATGATTTGTTTGATGTGATTCATTATAAACTTGAAATGATAGCCTGTTCAAACTTAGTTTACTGGATCAGACTTGCTTCGTCTCACCGTGTCTGTCAAACATTTTACCGTTTTCCAACTTCAATCCATGCCGCTTTTTATTGACTGAGGAGTTCATTTATTTTCTGAGCCGATACTCTTCTTGTCTCGCACTAGAACAATGTTTTAAATGTTAATTTCATGTTACTGACAGTGTAGCGACTGAGATGAGAACAATGATTGAGGAGGTGAAATCTAAACTTGAGAAGGACAGGTAGATTTTAGAACTATACAGAGTTCTGATGTTGCTTGCTTCAATTTTTGGTTATTAGTTATAAACGAATGAATGCAATTTAATTCCTCCAACCAATATCAGGCAAAATTTTGCAAAAGCTCTATCGAAAAGCTCAAAAGAGGTTGGTGGATAACCACGACTTGAATTAGAGGCCAAGCGCAAATTTGAAGTCATTATATTTCGTTTCTAGTTACATTTCATTAATGCATTTTCCATATGTTGTGTTAAAATCAATACGGCTTCTTTATAGTGTGAAAACTGTTTGAAGGACGAGACTGCAAAATTCCAAGCACTTTACGAGAAATTCACAAAAGAGAAAGCTACACATCTTCAGGCCATAAAAGGTAACATCCACTTCGAGTATTATTGTCAGAAATGTGCATTATTTAATATTTACTACTGCTCTGACTAATTTTCATTTTATTTATAAAATATCAACTGGAGCAAGACCTTTATCATGAGTAAATCCTTACCATGCTTTATAATTTTCCAAGATCGCATTCACGAAGTTAGGTTTCATTCCATAGCATAGAAGAATCCTCAATCTTTGAGAGACATCATAGTGGTGAGTGGCAATTGAAGCTTTGACCATGGAATTAGGTCCTCAACTACAATATGTGTGTTCCATCGATACTAGTAGCTTTGCCTTTTGGAATCCTTACTAAATGTGTATGATATATTGGTATTGAAGAACCTTTCACTAGTTGGTTGAAAATTTCAAGTTAATTTCATTTAACTACTACCAATCTATCAGATATTCTGGTATATTCACTATGGGCCTATGATCTCAAACCCTTGGGAGCTCTAAGAAAAGCCACCTCTTTCTTCTTCAAGGCGGTTCTTTAAACATATTTTCCTAAATCAAGATACTGTTTGGCTTTGGCAGATACCATTTCAAAATTTGAAGAGGAGAAAGAAAGGCTGTTCGCGAAATATGAACAACTGAGTAAGCAAGAAGTCATTGATCAATCAGATCGAAACGTTTTATGATGATTATTATCCAATTCCCTTCGTCTTTGTAACAGGAAAGAGAGAAAGGAGCTTGATATCTGAACAAGAGAAAGCTTGTGCTGAAAAGATTGCTCAATTGGAAGAGTCTTTGAAAAGGAAAAaGCAGGTATAGTACGACTTGTAATTCATAAAATCAGAACTCAACCAAACGCCTTCCACCTTTATGCTAATGGAAATAGGATTTGGAACATAGGATGACAAGACTTTCAGCCTTTTGAGGAAGACTCTTGGTTCATTTCTTGATACTGGCTCAGATGAGGACTTCCCAGCTGATGATTGA

mRNA sequence

ATGATGTTTACGGTTTGTAGCGATCTTAAAGGAATAGTGTCGGCGTTGAATCAGATCAAAGAGAGAGCTCATAAGGACGACCTGAAGAAGAATGAAGAGACGATCTCAAGTGTAGCGACTGAGATGAGAACAATGATTGAGGAGGTGAAATCTAAACTTGAGAAGGACAGGCAAAATTTTGCAAAAGCTCTATCGAAAAGCTCAAAAGAGTGTGAAAACTGTTTGAAGGACGAGACTGCAAAATTCCAAGCACTTTACGAGAAATTCACAAAAGAGAAAGCTACACATCTTCAGGCCATAAAAGATACCATTTCAAAATTTGAAGAGGAGAAAGAAAGGCTGTTCGCGAAATATGAACAACTGAGAAAGAGAGAAAGGAGCTTGATATCTGAACAAGAGAAAGCTTGTGCTGAAAAGATTGCTCAATTGGAAGAGTCTTTGAAAAGGAAAAAGCAGGATGACAAGACTTTCAGCCTTTTGAGGAAGACTCTTGGTTCATTTCTTGATACTGGCTCAGATGAGGACTTCCCAGCTGATGATTGA

Coding sequence (CDS)

ATGATGTTTACGGTTTGTAGCGATCTTAAAGGAATAGTGTCGGCGTTGAATCAGATCAAAGAGAGAGCTCATAAGGACGACCTGAAGAAGAATGAAGAGACGATCTCAAGTGTAGCGACTGAGATGAGAACAATGATTGAGGAGGTGAAATCTAAACTTGAGAAGGACAGGCAAAATTTTGCAAAAGCTCTATCGAAAAGCTCAAAAGAGTGTGAAAACTGTTTGAAGGACGAGACTGCAAAATTCCAAGCACTTTACGAGAAATTCACAAAAGAGAAAGCTACACATCTTCAGGCCATAAAAGATACCATTTCAAAATTTGAAGAGGAGAAAGAAAGGCTGTTCGCGAAATATGAACAACTGAGAAAGAGAGAAAGGAGCTTGATATCTGAACAAGAGAAAGCTTGTGCTGAAAAGATTGCTCAATTGGAAGAGTCTTTGAAAAGGAAAAaGCAGGATGACAAGACTTTCAGCCTTTTGAGGAAGACTCTTGGTTCATTTCTTGATACTGGCTCAGATGAGGACTTCCCAGCTGATGATTGA

Protein sequence

MMFTVCSDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD*
Homology
[Close]
BLAST of Cucsa.126640 vs. Swiss-Prot
Match: M6B_STRPY (M protein, serotype 6 OS=Streptococcus pyogenes GN=emm6 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-08
Identity = 43/164 (26.22%), Postives = 80/164 (48.78%), Query Frame = 1 

Query: 10  KGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSK 69
           KG+   L++ +E A      K  E   ++ T  +T+ E VK K+ K++++  + +    K
Sbjct: 138 KGLTKKLSEAEEEA----ANKERENKEAIGTLKKTLDETVKDKIAKEQES-KETIGTLKK 197

Query: 70  ECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLI 129
             +  +KD+ AK Q   E     K T  + +KD I+K +E KE +    + L +  +  I
Sbjct: 198 TLDETVKDKIAKEQESKETIGTLKKTLDETVKDKIAKEQESKETIGTLKKILDETVKDKI 257

Query: 130 SEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSD 174
           + ++K+  + I  L++ L +K + +K     RK L   LD   +
Sbjct: 258 AREQKS-KQDIGALKQELAKKDEGNKVSEASRKGLRRDLDASRE 295


HSP 2 Score: 38.9 bits (89), Expect = 7.0e-02
Identity = 28/127 (22.05%), Postives = 59/127 (46.46%), Query Frame = 1 

Query: 27  DLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQALY 86
           +LK  E  +++    +   + E + +     +   +A+    K  +  +KD+ AK Q   
Sbjct: 125 ELKAEENRLTTENKGLTKKLSEAEEEAANKERENKEAIGTLKKTLDETVKDKIAKEQESK 184

Query: 87  EKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLEES 146
           E     K T  + +KD I+K +E KE +    + L +  +  I++++++  E I  L++ 
Sbjct: 185 ETIGTLKKTLDETVKDKIAKEQESKETIGTLKKTLDETVKDKIAKEQES-KETIGTLKKI 244

Query: 147 LKRKKQD 154
           L    +D
Sbjct: 245 LDETVKD 250

[Close]
BLAST of Cucsa.126640 vs. TrEMBL
Match: A0A0A0LRW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073820 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.4e-89
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

Query: 8   DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 67
           DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS
Sbjct: 44  DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 103

Query: 68  SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 127
           SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS
Sbjct: 104 SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 163

Query: 128 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 164 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]
BLAST of Cucsa.126640 vs. TrEMBL
Match: A0A067JN68_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21435 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.8e-71
Identity = 133/174 (76.44%), Postives = 160/174 (91.95%), Query Frame = 1 

Query: 7   SDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSK 66
           SD+KGI+SAL QIKE+A KDD KKNEETISSVA+++R+MI+E+KSK+EKDRQ+FAKALSK
Sbjct: 36  SDIKGIMSALQQIKEKAQKDDQKKNEETISSVASDIRSMIDELKSKIEKDRQSFAKALSK 95

Query: 67  SSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRER 126
           SSKECENCLK+E+ KF+ +YEKF KEK  HLQA+KDTISK+EE+K+RLF +YEQLRK+E+
Sbjct: 96  SSKECENCLKNESTKFKEIYEKFCKEKEAHLQALKDTISKYEEDKDRLFVRYEQLRKKEK 155

Query: 127 SLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           ++ISEQEK CA+KIA+LEESLKRKKQDDKTFS+LRKTLGSFL   SDEDFP DD
Sbjct: 156 NMISEQEKTCADKIARLEESLKRKKQDDKTFSILRKTLGSFLGNASDEDFPPDD 209

[Close]
BLAST of Cucsa.126640 vs. TrEMBL
Match: B9RZ89_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0936350 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.2e-70
Identity = 130/174 (74.71%), Postives = 162/174 (93.10%), Query Frame = 1 

Query: 7   SDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSK 66
           SD+KGI+SAL+QI+E+  KD  KKNEETISS+++E+R+M++++KSK+EKDRQ+FAKALSK
Sbjct: 38  SDIKGIMSALHQIREKTQKDGQKKNEETISSLSSEIRSMMDQLKSKVEKDRQSFAKALSK 97

Query: 67  SSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRER 126
           SSKECENCLK+ETAKFQ +Y+KF KEKA HLQA++DTISKFEE+KE+LF +YEQL+K+ER
Sbjct: 98  SSKECENCLKNETAKFQEIYDKFCKEKAAHLQALQDTISKFEEDKEKLFLRYEQLKKKER 157

Query: 127 SLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           ++I+EQEKACAEKIA LEESLK+KKQDDKTFS+LRKTLGSFL+  SDEDFP DD
Sbjct: 158 NIIAEQEKACAEKIANLEESLKKKKQDDKTFSILRKTLGSFLENASDEDFPPDD 211

[Close]
BLAST of Cucsa.126640 vs. TrEMBL
Match: A0A0D2T1I5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G027600 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.0e-68
Identity = 131/174 (75.29%), Postives = 155/174 (89.08%), Query Frame = 1 

Query: 7   SDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSK 66
           +DLKGI+SAL  IKE+A KD  KKNEETISSVA E+R+ ++++KSK EK+RQ FAKAL+K
Sbjct: 38  NDLKGIMSALQLIKEKAQKDGKKKNEETISSVAAEIRSKLDDLKSKFEKERQTFAKALTK 97

Query: 67  SSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRER 126
           SSKECENCLK ETAKFQ +YEKF KEK  HLQ++KDTIS+FEE+KERLF +YEQLRK+E+
Sbjct: 98  SSKECENCLKSETAKFQEVYEKFCKEKTIHLQSLKDTISRFEEDKERLFVRYEQLRKKEK 157

Query: 127 SLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           SLISEQEK  A+KIAQLEESLK+KKQDD+TFS+LRKTLGSFLD GSDEDFP +D
Sbjct: 158 SLISEQEKFYADKIAQLEESLKKKKQDDRTFSILRKTLGSFLDNGSDEDFPPED 211

[Close]
BLAST of Cucsa.126640 vs. TrEMBL
Match: A0A067GKH4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039181mg PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 6.7e-68
Identity = 131/174 (75.29%), Postives = 155/174 (89.08%), Query Frame = 1 

Query: 7   SDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSK 66
           SDLKGI+SAL QI+E+A +D  KKNEETISSVATE+R+ I+E++SK+EKDRQ+FAKALSK
Sbjct: 33  SDLKGIMSALQQIREKAQRDGQKKNEETISSVATEIRSKIDELRSKIEKDRQSFAKALSK 92

Query: 67  SSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRER 126
           SSKECE+CLK+ETAKFQ +YEKF KE+A HLQ +KDTISKFEE+KERLF +YEQLRK+E+
Sbjct: 93  SSKECESCLKNETAKFQDVYEKFCKERAAHLQVLKDTISKFEEDKERLFMRYEQLRKKEK 152

Query: 127 SLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           SLISEQEK CA+KIA LE SLK+KK DDKTFS+LRKT+GSFL   SDEDF  DD
Sbjct: 153 SLISEQEKYCADKIANLESSLKKKKHDDKTFSILRKTIGSFLGNASDEDFLPDD 206

[Close]
BLAST of Cucsa.126640 vs. TAIR10
Match: AT2G33793.1 (AT2G33793.1 unknown protein)

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-66
Identity = 122/177 (68.93%), Postives = 155/177 (87.57%), Query Frame = 1 

Query: 5   VCSDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKAL 64
           V SD KGI+SAL Q +E+AH+D  KK EE+ISSV+TE+++ I+E+KSKLEK+RQNF+KAL
Sbjct: 36  VSSDFKGIMSALQQFREKAHEDGRKKKEESISSVSTEVKSKIDELKSKLEKERQNFSKAL 95

Query: 65  SKSSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKR 124
           SKSSKECEN LKDE AKF+ L++KF K+KA HLQ +KDTISKFEE+KERL+ +YEQLRK+
Sbjct: 96  SKSSKECENILKDEAAKFEELHKKFVKDKADHLQGLKDTISKFEEDKERLYMRYEQLRKK 155

Query: 125 ERSLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDT-GSDEDFPADD 181
           E+++I+EQEK C EK+AQLEESLK+KK+ DKTFS+LRKTLGSFL+   SDE+FP D+
Sbjct: 156 EKTMITEQEKFCTEKLAQLEESLKKKKRGDKTFSILRKTLGSFLENEASDEEFPPDE 212

[Close]
BLAST of Cucsa.126640 vs. TAIR10
Match: AT2G46980.2 (AT2G46980.2 unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.9e-08
Identity = 34/135 (25.19%), Postives = 63/135 (46.67%), Query Frame = 1 

Query: 15  ALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENC 74
           AL   + +      KK+ E I+SV+ E+   +E +KS +  +    +       K  E  
Sbjct: 636 ALQNFERKLKSAAEKKSSEIIASVSEEIHLELENIKSHIITEAGKTSNLAKTKRKHAETR 695

Query: 75  LKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEK 134
           L+++  K + ++EKF  + + HL+  K TI + E  +  L    ++ R   + LI+  E 
Sbjct: 696 LQEQEEKMRMIHEKFKDDVSHHLEDFKSTIEELEANQSELKGSIKKQRTSHQKLIAHFEG 755

Query: 135 ACAEKIAQLEESLKR 150
               K   L+++ KR
Sbjct: 756 GIETK---LDDATKR 767

[Close]
BLAST of Cucsa.126640 vs. TAIR10
Match: AT5G56360.1 (AT5G56360.1 calmodulin-binding protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07
Identity = 51/173 (29.48%), Postives = 78/173 (45.09%), Query Frame = 1 

Query: 11  GIVSALNQIKE--RAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSS 70
           G VS  N   E  +A +++LKK  ET +      R  IE+ K  LEKD     K      
Sbjct: 125 GHVSCQNTCWEAGKAARENLKKKIETYNQGLVIRRQEIEQAKVGLEKDAAELKK------ 184

Query: 71  KECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSL 130
                 LK E        +K  K     L+  K+ I K EE KERL  + E+  K+E  L
Sbjct: 185 ------LKSE--------QKILKGLVDQLKDRKEQIEKVEE-KERLQKEKEEKEKKEAEL 244

Query: 131 ISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLD-TGSDEDFPADD 181
            ++Q K  AE+     E ++    D+ T ++ +    +  D  G+ +D+P+D+
Sbjct: 245 AAQQGKGDAEEKTDDSEKVEESSHDEGTPAVSQHDETTHHDEIGNYKDYPSDE 276

[Close]
BLAST of Cucsa.126640 vs. NCBI nr
Match: gi|449457729|ref|XP_004146600.1| (PREDICTED: DNA ligase 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 3.4e-89
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

Query: 8   DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 67
           DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS
Sbjct: 44  DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 103

Query: 68  SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 127
           SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS
Sbjct: 104 SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 163

Query: 128 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 164 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]
BLAST of Cucsa.126640 vs. NCBI nr
Match: gi|659068054|ref|XP_008442500.1| (PREDICTED: DNA ligase 1 isoform X1 [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 3.4e-89
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

Query: 8   DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 67
           DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS
Sbjct: 44  DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 103

Query: 68  SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 127
           SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS
Sbjct: 104 SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 163

Query: 128 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 164 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]
BLAST of Cucsa.126640 vs. NCBI nr
Match: gi|778658735|ref|XP_011653172.1| (PREDICTED: DNA ligase 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 8.1e-83
Identity = 167/173 (96.53%), Postives = 167/173 (96.53%), Query Frame = 1 

Query: 8   DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 67
           DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS
Sbjct: 44  DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 103

Query: 68  SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 127
           SKE      DETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS
Sbjct: 104 SKE------DETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 163

Query: 128 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 164 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 210

[Close]
BLAST of Cucsa.126640 vs. NCBI nr
Match: gi|659068056|ref|XP_008442507.1| (PREDICTED: glucosidase 2 subunit beta isoform X2 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 8.1e-83
Identity = 167/173 (96.53%), Postives = 167/173 (96.53%), Query Frame = 1 

Query: 8   DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 67
           DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS
Sbjct: 44  DLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKS 103

Query: 68  SKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 127
           SKE      DETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS
Sbjct: 104 SKE------DETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERS 163

Query: 128 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 164 LISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 210

[Close]
BLAST of Cucsa.126640 vs. NCBI nr
Match: gi|802784758|ref|XP_012091598.1| (PREDICTED: uncharacterized protein LOC105649537 [Jatropha curcas])

HSP 1 Score: 275.8 bits (704), Expect = 5.4e-71
Identity = 133/174 (76.44%), Postives = 160/174 (91.95%), Query Frame = 1 

Query: 7   SDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSK 66
           SD+KGI+SAL QIKE+A KDD KKNEETISSVA+++R+MI+E+KSK+EKDRQ+FAKALSK
Sbjct: 36  SDIKGIMSALQQIKEKAQKDDQKKNEETISSVASDIRSMIDELKSKIEKDRQSFAKALSK 95

Query: 67  SSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRER 126
           SSKECENCLK+E+ KF+ +YEKF KEK  HLQA+KDTISK+EE+K+RLF +YEQLRK+E+
Sbjct: 96  SSKECENCLKNESTKFKEIYEKFCKEKEAHLQALKDTISKYEEDKDRLFVRYEQLRKKEK 155

Query: 127 SLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 181
           ++ISEQEK CA+KIA+LEESLKRKKQDDKTFS+LRKTLGSFL   SDEDFP DD
Sbjct: 156 NMISEQEKTCADKIARLEESLKRKKQDDKTFSILRKTLGSFLGNASDEDFPPDD 209

The following BLAST results are available for this feature:
BLAST of Cucsa.126640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
M6B_STRPY6.5e-0826.22M protein, serotype 6 OS=Streptococcus pyogenes GN=emm6 PE=1 SV=1[more]
BLAST of Cucsa.126640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRW7_CUCSA2.4e-89100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073820 PE=4 SV=1[more]
A0A067JN68_JATCU3.8e-7176.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21435 PE=4 SV=1[more]
B9RZ89_RICCO3.2e-7074.71Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0936350 PE=4 SV=1[more]
A0A0D2T1I5_GOSRA3.0e-6875.29Uncharacterized protein OS=Gossypium raimondii GN=B456_011G027600 PE=4 SV=1[more]
A0A067GKH4_CITSI6.7e-6875.29Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039181mg PE=4 SV=1[more]
BLAST of Cucsa.126640 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33793.11.1e-6668.93 unknown protein[more]
AT2G46980.26.9e-0825.19 unknown protein[more]
AT5G56360.15.9e-0729.48 calmodulin-binding protein[more]
BLAST of Cucsa.126640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457729|ref|XP_004146600.1|3.4e-89100.00PREDICTED: DNA ligase 1 isoform X1 [Cucumis sativus][more]
gi|659068054|ref|XP_008442500.1|3.4e-89100.00PREDICTED: DNA ligase 1 isoform X1 [Cucumis melo][more]
gi|778658735|ref|XP_011653172.1|8.1e-8396.53PREDICTED: DNA ligase 1 isoform X2 [Cucumis sativus][more]
gi|659068056|ref|XP_008442507.1|8.1e-8396.53PREDICTED: glucosidase 2 subunit beta isoform X2 [Cucumis melo][more]
gi|802784758|ref|XP_012091598.1|5.4e-7176.44PREDICTED: uncharacterized protein LOC105649537 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.126640.1Cucsa.126640.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 39..66
score: -coord: 133..153
score: -coord: 97..131
scor
NoneNo IPR availablePANTHERPTHR35295FAMILY NOT NAMEDcoord: 1..180
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.126640Cla019502Watermelon (97103) v1cgywmB205
Cucsa.126640Csa1G073820Cucumber (Chinese Long) v2cgycuB170
Cucsa.126640MELO3C002599Melon (DHL92) v3.5.1cgymeB198
Cucsa.126640ClCG03G006010Watermelon (Charleston Gray)cgywcgB203
Cucsa.126640CSPI01G12080Wild cucumber (PI 183967)cgycpiB172
Cucsa.126640CmaCh13G006480Cucurbita maxima (Rimu)cgycmaB0336
Cucsa.126640CmoCh13G006660Cucurbita moschata (Rifu)cgycmoB0330
Cucsa.126640Lsi02G007480Bottle gourd (USVL1VR-Ls)cgylsiB194
Cucsa.126640Cp4.1LG20g04220Cucurbita pepo (Zucchini)cgycpeB0328
Cucsa.126640MELO3C002599.2Melon (DHL92) v3.6.1cgymedB197
Cucsa.126640CsaV3_1G012270Cucumber (Chinese Long) v3cgycucB174
Cucsa.126640Cla97C03G057320Watermelon (97103) v2cgywmbB200
Cucsa.126640Bhi08G001279Wax gourdcgywgoB233
Cucsa.126640Carg21496Silver-seed gourdcarcgyB1068
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.126640Wax gourdcgywgoB230
Cucsa.126640Cucumber (Gy14) v1cgycgyB004
Cucsa.126640Cucumber (Gy14) v1cgycgyB076
Cucsa.126640Cucurbita maxima (Rimu)cgycmaB0335
Cucsa.126640Cucurbita maxima (Rimu)cgycmaB0338
Cucsa.126640Cucurbita maxima (Rimu)cgycmaB0341
Cucsa.126640Cucurbita moschata (Rifu)cgycmoB0329
Cucsa.126640Cucurbita moschata (Rifu)cgycmoB0332
Cucsa.126640Cucurbita moschata (Rifu)cgycmoB0333
Cucsa.126640Wild cucumber (PI 183967)cgycpiB175
Cucsa.126640Wild cucumber (PI 183967)cgycpiB176
Cucsa.126640Cucumber (Chinese Long) v2cgycuB172
Cucsa.126640Cucumber (Chinese Long) v2cgycuB173
Cucsa.126640Melon (DHL92) v3.5.1cgymeB199
Cucsa.126640Melon (DHL92) v3.5.1cgymeB201
Cucsa.126640Watermelon (Charleston Gray)cgywcgB201
Cucsa.126640Watermelon (Charleston Gray)cgywcgB202
Cucsa.126640Watermelon (97103) v1cgywmB208
Cucsa.126640Watermelon (97103) v1cgywmB209
Cucsa.126640Cucurbita pepo (Zucchini)cgycpeB0324
Cucsa.126640Cucurbita pepo (Zucchini)cgycpeB0327
Cucsa.126640Cucurbita pepo (Zucchini)cgycpeB0329
Cucsa.126640Cucurbita pepo (Zucchini)cgycpeB0330
Cucsa.126640Bottle gourd (USVL1VR-Ls)cgylsiB193
Cucsa.126640Melon (DHL92) v3.6.1cgymedB199
Cucsa.126640Silver-seed gourdcarcgyB0182
Cucsa.126640Silver-seed gourdcarcgyB0716
Cucsa.126640Silver-seed gourdcarcgyB0809
Cucsa.126640Cucumber (Chinese Long) v3cgycucB176
Cucsa.126640Cucumber (Chinese Long) v3cgycucB177
Cucsa.126640Watermelon (97103) v2cgywmbB197
Cucsa.126640Watermelon (97103) v2cgywmbB199