Cucsa.125520 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTTCATTGCAGAATGGATTCGGCCTCCAAATTCCTTCGTAGTTTAGCTAATGCCACCAACAAAAaCACCGTTATCAACGTCTGTTTAGTCGTTTCCTTCGCCGCACTGACCGCAAGGTCAATCAAGCAGGAGAGACAAATTGAAGCTCTGGAAACCGAGAAAAATTCACTTCTCAATTCCAATAAAGCGTTGAAGAAAACCATGTGGGATTGGAAGCAACAGCTATTCGCCGAAGCCTCAACCGAATCTGCTTTAGTCCCTCTTGCCAGGATCAAAGCTATCTATGGCGAAGCTCCCATTTCCCCTTCCGGTAATATACGCCATGCTTCTCTCTGTTCTGTTCTTTATGTTTTTTtACTTTCTGTTGTTGGAAAAGTTAGTGTTTAGTTGAATGTGTCGAAATGTCAGTGATTCGTGTTAGAAATTGAGTGTCTGAAAATGATGGGTCGTTCCAAGCATTTCAAATTCCTTATTCGTACTTTACAAATTGTTGGGTTTCGTTGCTACTTCAACTATATCATCATTGACCTGATTTTTCTTATCATCCATTTCTGAACTTCAATGTTCTTATGATTAAGTACCATGTTCTTGGTTTTCATGGATTCTAATCTCTCAGAACTATTAGCCAGAACCCAGGAAACAAATAAGGTATGAGATTATGAATCTAAAAAGAATAGTTTTCATCGCACCATTATATGAAAAAAAGTGTGTTTGAGAAGTGAATGTTCTACTATGGGATGCTGGAATTGAAGACTAAAGTTAAGATTGATAAGGTCAACAGAACCTCCACCTATCTTCTACCTTGGCTATAAACTCGAACTACCCAAATGGTCTCGTACTAATTAAGATAATTGTTCTCACTTATGTACTAATGATTGTACTCATGTTTGCCCTAAAGATAATCGATAAAGAAGGAACCATACCCAGCCAAGCCTAAAGCCACTGAGCAATTCTCTACCTTCATCCTTTCCTACATTTCAATTTACGAATCACCTTGACAACTTTCACCcTGATAGACCATGCTGATCATTCCTGTTCTCTGCCTATTAAGTTAACGTTCCTGCCCAGCTGATGCAAAGGTTTTCATTATGGGGATAGTATATGCTGTATTAAACTTTACCGGGAAAGCACTGCTATAGTACTACGATTTTATATGAGAAAGAGACGCTTGAAAAGCTTATATGCGAAAGGAAGCAATTTCTCTTATTGGAAGCTTAAGAAAGGCACTCCAATTGAAGTTGATTGTGATGGCAGAATAGTCATAGATGATAGGAGGAGTTGGAAGGGGAAGCTAAAAGACCATTGAACTTTTCCAATTCTTGAACGTCTTCCCCATATTTCTCCCTATTATTAGAATCTGTTAATTTCTTTCTTTCTAGCCACCAGCCACTATACCTAATCCTGGACTGCATTTTGCTTTAGGATCTCTCTCCTTTCGTAGTTGGTTCAGCACAGAAGCTGCATCTAACTATCCTTGGTCCGTAAATAAAAAaCCGAGAAAATGATGATGTAGAGGAAAACTAGTAAAAGGCTTTGTGTCTTCTTTGGATTCCTACATAGTATGCACCAACTTAACTTGGTTGCAAGATCAGCAATTGTCATCTTCAAATTGGATTTTTGTATCTCCATTGTGTTTAGGTCAAGACACACAAACCAACAATATCTCTCGATTTTTATAAATTGGTTACCTTTCCAATTTGATAGTGATAAGTTTCTAGGTAGTGAGGAAACCAGTCTGCTATCTAGCTGTCATTGATCAACAGAAATGCGTTGCTTTCGTCAACCTTATGATAATATTACCCTGTTGACGATGACTCTAGTATGTATTTCGTAACTTTTGGGGAGTTATGAAGATCTTTGCTCGAGAATTGGTACTAAAATGTCTGCTTGTAGTACAAACGGATTGTAATTTCAGATAGATTGGAAGATAAACAGCACGAGTAGATTTTTTtAAAAAAAaGATTCAAATGCATGTTTGATGCAAAACTTTtACCCTTTTTCCTGGCAGAGTTCTTGCATAACAATGTTGGGAATCTATTAAACGATTGCCTATAAATTAATAACTGTAATGTAATGTGAGAGTTTTAAGTCTCGATTCAGATTATGTCAAATCCTATCCATATTATTTCATTCTCCCATGCATATTATTTAGTTATTGAACACATGAATCAAATACTCTTGTGGATAGTCTTTTTTCAAGTTTGATTACAAAAAGAAGTGTTTGTTTAGAAAGAGTTTTAAGTGTCTAAAAAGTCATTTTGAATATGTTCAAGTCTATTATTGTACAGGCTAGCTTTTACAGATTTATCCATTGATCCCTTTTTTATGGACCATACAGGAGCAGTAAATGCCACAACCGAAGATGCAACTTCACGAAGCTCCAAACTTATGGTTTAATGTTAGCTTCACTCAAGTTTTCCAGGTTTTGTTTCCTTTGTTCACAAATTGGCTGAAGAATCGAACTCCATTAAGATTTGCATATTTCTATGCTCAATGCTAAAAAAAGTAGTGCAGAATATAAGGAATTAGATTTTtCCTTTTTCAGGCACGTATTATCAACTTCAAAGTCAGATATCTTATTCCCTACTCTCACATTTTCAGAAGGAAAAAaGAAAaGAAATCTTTTAGTTTGCCATTAAATGCTCTAG GCTTCATTGCAGAATGGATTCGGCCTCCAAATTCCTTCGTAGTTTAGCTAATGCCACCAACAAAAACACCGTTATCAACGTCTGTTTAGTCGTTTCCTTCGCCGCACTGACCGCAAGGTCAATCAAGCAGGAGAGACAAATTGAAGCTCTGGAAACCGAGAAAAATTCACTTCTCAATTCCAATAAAGCGTTGAAGAAAACCATGTGGGATTGGAAGCAACAGCTATTCGCCGAAGCCTCAACCGAATCTGCTTTAGTCCCTCTTGCCAGGATCAAAGCTATCTATGGCGAAGCTCCCATTTCCCCTTCCGGAGCAGTAAATGCCACAACCGAAGATGCAACTTCACGAAGCTCCAAACTTATGGTTTAATGTTAGCTTCACTCAAGTTTTCCAGGTTTTGTTTCCTTTGTTCACAAATTGGCTGAAGAATCGAACTCCATTAAGATTTGCATATTTCTATGCTCAATGCTAAAAAAAGTAGTGCAGAATATAAGGAATTAGATTTTTCCTTTTTCAGGCACGTATTATCAACTTCAAAGTCAGATATCTTATTCCCTACTCTCACATTTTCAGAAGGAAAAAAGAAAAGAAATCTTTTAGTTTGCCATTAAATGCTCTAG ATGGATTCGGCCTCCAAATTCCTTCGTAGTTTAGCTAATGCCACCAACAAAAaCACCGTTATCAACGTCTGTTTAGTCGTTTCCTTCGCCGCACTGACCGCAAGGTCAATCAAGCAGGAGAGACAAATTGAAGCTCTGGAAACCGAGAAAAATTCACTTCTCAATTCCAATAAAGCGTTGAAGAAAACCATGTGGGATTGGAAGCAACAGCTATTCGCCGAAGCCTCAACCGAATCTGCTTTAGTCCCTCTTGCCAGGATCAAAGCTATCTATGGCGAAGCTCCCATTTCCCCTTCCGGAGCAGTAAATGCCACAACCGAAGATGCAACTTCACGAAGCTCCAAACTTATGGTTTAA MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPSGAVNATTEDATSRSSKLMV*
BLAST of Cucsa.125520 vs. TrEMBL
Match: A0A0A0L380_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G364020 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 9.5e-47 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1
BLAST of Cucsa.125520 vs. TrEMBL
Match: B9RJ81_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1032120 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.3e-31 Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 1
BLAST of Cucsa.125520 vs. TrEMBL
Match: A0A067GZE9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033431mg PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 5.6e-31 Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 1
BLAST of Cucsa.125520 vs. TrEMBL
Match: A0A067GPS0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033431mg PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 5.6e-31 Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 1
BLAST of Cucsa.125520 vs. TrEMBL
Match: E9JFW5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12086 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.8e-30 Identity = 70/118 (59.32%), Postives = 90/118 (76.27%), Query Frame = 1
BLAST of Cucsa.125520 vs. TAIR10
Match: AT1G48200.1 (AT1G48200.1 unknown protein) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-24 Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 1
BLAST of Cucsa.125520 vs. NCBI nr
Match: gi|449468077|ref|XP_004151748.1| (PREDICTED: uncharacterized protein LOC101219754 [Cucumis sativus]) HSP 1 Score: 225.7 bits (574), Expect = 4.2e-56 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1
BLAST of Cucsa.125520 vs. NCBI nr
Match: gi|659086865|ref|XP_008444149.1| (PREDICTED: uncharacterized protein LOC103487583 [Cucumis melo]) HSP 1 Score: 204.1 bits (518), Expect = 1.3e-49 Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 1
BLAST of Cucsa.125520 vs. NCBI nr
Match: gi|700199413|gb|KGN54571.1| (hypothetical protein Csa_4G364020 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1
BLAST of Cucsa.125520 vs. NCBI nr
Match: gi|1000977483|ref|XP_015571458.1| (PREDICTED: uncharacterized protein LOC8274113 [Ricinus communis]) HSP 1 Score: 147.1 bits (370), Expect = 1.9e-32 Identity = 75/118 (63.56%), Postives = 94/118 (79.66%), Query Frame = 1
BLAST of Cucsa.125520 vs. NCBI nr
Match: gi|223546886|gb|EEF48383.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 142.1 bits (357), Expect = 6.2e-31 Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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