Cucsa.124440 (gene) Cucumber (Gy14) v1

NameCucsa.124440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold01001 : 380729 .. 381452 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTGTTCTTGCTAGGTTTTGGTGAAACAAAACAAAACAAAACAAAAAGGTAATCTTCGATATCTTATTAATCTTCATCTCTTATTTCTCAATTTTTAATGAATTACCTCCTTCTCTTTCACAATTTTTATTTTATGGTTTTCTTCTTCTTCTTCCACTGATTCTTATTACTCTCTCCTTTCATAGCATGTAATTGTCCACAATTCCCCTCCCTTCTCTTTCTTTCAATTTAAACAATCTATACTATATCTTACTTTTAATTTCTTTGTATTCTTCCTGAAATCTCATCTTCAATTATCTAATTTTGAAACTATATATATATATTTTTTAGAATTAAAGATAAATCGGTTCTGAACAATAACTTAGTAAAGGTAAAGTTAACAGTGAACGACTTGATTTGGGATCTTTTCTTATAAAATAAATATAACAAACAAAAATTGATATATTTTATTATATGTACAAGGACAAAATTATAAAAaGAAAATTTAGTTTGCTAAATTTTAAAACAAATCTTAGGATTGATGGGGTACGTTGTGATAATTCCACTATGGATGTTGTTGTTCGTTGTGATCGTGGGCCTTACTGTTTACCTATTAGTAAGGGCCCGTAGACGAAGACAAGCAGCCCAACTTCCAGTTTATTATGGGCCTCCAGCTCCCCCACTTGGGGCCCAAGATAAGCCCAACTGATTTATCCAATACAATGCTCGTACTAGTAAGTTGTG

mRNA sequence

GTCTGTTCTTGCTAGGTTTTGGTGaaacaaaacaaaacaaaacaaaaAGGATTGATGGGGTACGTTGTGATAATTCCACTATGGATGTTGTTGTTCGTTGTGATCGTGGGCCTTACTGTTTACCTATTAGTAAGGGCCCGTAGACGAAGACAAGCAGCCCAACTTCCAGTTTATTATGGGCCTCCAGCTCCCCCACTTGGGGCCCAAGATAAGCCCAACTGATTTATCCAATACAATGCTCGTACTAGTAAGTTGTG

Coding sequence (CDS)

ATGGGGTACGTTGTGATAATTCCACTATGGATGTTGTTGTTCGTTGTGATCGTGGGCCTTACTGTTTACCTATTAGTAAGGGCCCGTAGACGAAGACAAGCAGCCCAACTTCCAGTTTATTATGGGCCTCCAGCTCCCCCACTTGGGGCCCAAGATAAGCCCAACTGA

Protein sequence

MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPPLGAQDKPN*
BLAST of Cucsa.124440 vs. TrEMBL
Match: A0A067JYT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16520 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 8.3e-09
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPPLGAQDKP 55
          MGYV+++ L ++LF++IV L  YL+ R   RR+AA+LP YYGPPAPPL  Q  P
Sbjct: 1  MGYVIVVSLPLILFILIVALACYLVGRNLGRREAARLPQYYGPPAPPLQPQSSP 54

BLAST of Cucsa.124440 vs. TrEMBL
Match: W9S7P7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024375 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-08
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPPLGA----QDKPN 56
          MGY+V++ + ++LF++IV L  YLL RAR R QA  +P YYGPPAPP  A    QDKP+
Sbjct: 1  MGYIVVLSVPVILFILIVALAFYLLGRARGRSQAESVPQYYGPPAPPFQAHPPPQDKPS 59

BLAST of Cucsa.124440 vs. TrEMBL
Match: U5G733_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s12890g PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.1e-08
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPP 48
          MGYVVI+ L ++LF++IV L  YLL RAR R +AA++P Y+GPPAPP
Sbjct: 1  MGYVVIVSLPVILFILIVALAFYLLGRARGRSEAARIPQYHGPPAPP 47

BLAST of Cucsa.124440 vs. TrEMBL
Match: V4SSQ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013303mg PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-06
Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPPLGAQ 52
          M Y+V + L  +LF++IV L  YLL R R R QAA++P YYGPPAPP   Q
Sbjct: 1  MVYIVEVSLPFILFILIVALAFYLLGRYRGRSQAARMPQYYGPPAPPYPVQ 51

BLAST of Cucsa.124440 vs. TrEMBL
Match: K4CQH7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 5.0e-06
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYG--PPAPPLGAQDKP 55
          MG+V++I L ++LF++I  L  YL  ++R RR+AA +P YYG  PPAPP G    P
Sbjct: 1  MGFVIVISLPLILFILIAALACYLFGKSRGRREAAMVPPYYGPPPPAPPPGVLSPP 56

BLAST of Cucsa.124440 vs. NCBI nr
Match: gi|643717688|gb|KDP29131.1| (hypothetical protein JCGZ_16520 [Jatropha curcas])

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-08
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPPLGAQDKP 55
          MGYV+++ L ++LF++IV L  YL+ R   RR+AA+LP YYGPPAPPL  Q  P
Sbjct: 1  MGYVIVVSLPLILFILIVALACYLVGRNLGRREAARLPQYYGPPAPPLQPQSSP 54

BLAST of Cucsa.124440 vs. NCBI nr
Match: gi|703141517|ref|XP_010107522.1| (hypothetical protein L484_024375 [Morus notabilis])

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-08
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPPLGA----QDKPN 56
          MGY+V++ + ++LF++IV L  YLL RAR R QA  +P YYGPPAPP  A    QDKP+
Sbjct: 1  MGYIVVLSVPVILFILIVALAFYLLGRARGRSQAESVPQYYGPPAPPFQAHPPPQDKPS 59

BLAST of Cucsa.124440 vs. NCBI nr
Match: gi|566176025|ref|XP_006381443.1| (hypothetical protein POPTR_0006s12890g [Populus trichocarpa])

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-07
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPP 48
          MGYVVI+ L ++LF++IV L  YLL RAR R +AA++P Y+GPPAPP
Sbjct: 1  MGYVVIVSLPVILFILIVALAFYLLGRARGRSEAARIPQYHGPPAPP 47

BLAST of Cucsa.124440 vs. NCBI nr
Match: gi|567872341|ref|XP_006428760.1| (hypothetical protein CICLE_v10013303mg [Citrus clementina])

HSP 1 Score: 58.2 bits (139), Expect = 5.5e-06
Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 1

Query: 1  MGYVVIIPLWMLLFVVIVGLTVYLLVRARRRRQAAQLPVYYGPPAPPLGAQ 52
          M Y+V + L  +LF++IV L  YLL R R R QAA++P YYGPPAPP   Q
Sbjct: 1  MVYIVEVSLPFILFILIVALAFYLLGRYRGRSQAARMPQYYGPPAPPYPVQ 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A067JYT9_JATCU8.3e-0955.56Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16520 PE=4 SV=1[more]
W9S7P7_9ROSA1.8e-0854.24Uncharacterized protein OS=Morus notabilis GN=L484_024375 PE=4 SV=1[more]
U5G733_POPTR9.1e-0861.70Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s12890g PE=4 SV=1[more]
V4SSQ6_9ROSI3.8e-0654.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013303mg PE=4 SV=1[more]
K4CQH7_SOLLC5.0e-0648.21Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|643717688|gb|KDP29131.1|1.2e-0855.56hypothetical protein JCGZ_16520 [Jatropha curcas][more]
gi|703141517|ref|XP_010107522.1|2.6e-0854.24hypothetical protein L484_024375 [Morus notabilis][more]
gi|566176025|ref|XP_006381443.1|1.3e-0761.70hypothetical protein POPTR_0006s12890g [Populus trichocarpa][more]
gi|567872341|ref|XP_006428760.1|5.5e-0654.90hypothetical protein CICLE_v10013303mg [Citrus clementina][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.124440.1Cucsa.124440.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.124440Silver-seed gourdcarcgyB0189
Cucsa.124440Silver-seed gourdcarcgyB0281
Cucsa.124440Silver-seed gourdcarcgyB0292
Cucsa.124440Cucumber (Chinese Long) v3cgycucB170
Cucsa.124440Cucumber (Chinese Long) v3cgycucB171
Cucsa.124440Cucumber (Chinese Long) v3cgycucB172
Cucsa.124440Watermelon (97103) v2cgywmbB192
Cucsa.124440Watermelon (97103) v2cgywmbB194
Cucsa.124440Watermelon (97103) v2cgywmbB195
Cucsa.124440Wax gourdcgywgoB224
Cucsa.124440Wax gourdcgywgoB227
Cucsa.124440Cucumber (Gy14) v1cgycgyB073
Cucsa.124440Cucumber (Gy14) v1cgycgyB074
Cucsa.124440Cucumber (Gy14) v1cgycgyB075
Cucsa.124440Cucurbita maxima (Rimu)cgycmaB0325
Cucsa.124440Cucurbita maxima (Rimu)cgycmaB0328
Cucsa.124440Cucurbita maxima (Rimu)cgycmaB0329
Cucsa.124440Cucurbita maxima (Rimu)cgycmaB0330
Cucsa.124440Cucurbita moschata (Rifu)cgycmoB0320
Cucsa.124440Cucurbita moschata (Rifu)cgycmoB0321
Cucsa.124440Cucurbita moschata (Rifu)cgycmoB0324
Cucsa.124440Cucurbita moschata (Rifu)cgycmoB0325
Cucsa.124440Cucurbita moschata (Rifu)cgycmoB0326
Cucsa.124440Wild cucumber (PI 183967)cgycpiB169
Cucsa.124440Wild cucumber (PI 183967)cgycpiB170
Cucsa.124440Wild cucumber (PI 183967)cgycpiB167
Cucsa.124440Wild cucumber (PI 183967)cgycpiB168
Cucsa.124440Cucumber (Chinese Long) v2cgycuB168
Cucsa.124440Cucumber (Chinese Long) v2cgycuB166
Cucsa.124440Cucumber (Chinese Long) v2cgycuB167
Cucsa.124440Melon (DHL92) v3.5.1cgymeB190
Cucsa.124440Melon (DHL92) v3.5.1cgymeB191
Cucsa.124440Melon (DHL92) v3.5.1cgymeB195
Cucsa.124440Watermelon (Charleston Gray)cgywcgB196
Cucsa.124440Watermelon (Charleston Gray)cgywcgB198
Cucsa.124440Watermelon (Charleston Gray)cgywcgB199
Cucsa.124440Watermelon (97103) v1cgywmB199
Cucsa.124440Watermelon (97103) v1cgywmB200
Cucsa.124440Watermelon (97103) v1cgywmB201
Cucsa.124440Watermelon (97103) v1cgywmB203
Cucsa.124440Cucurbita pepo (Zucchini)cgycpeB0314
Cucsa.124440Cucurbita pepo (Zucchini)cgycpeB0316
Cucsa.124440Cucurbita pepo (Zucchini)cgycpeB0317
Cucsa.124440Cucurbita pepo (Zucchini)cgycpeB0318
Cucsa.124440Cucurbita pepo (Zucchini)cgycpeB0320
Cucsa.124440Bottle gourd (USVL1VR-Ls)cgylsiB190
Cucsa.124440Bottle gourd (USVL1VR-Ls)cgylsiB191
Cucsa.124440Melon (DHL92) v3.6.1cgymedB189
Cucsa.124440Melon (DHL92) v3.6.1cgymedB190
Cucsa.124440Melon (DHL92) v3.6.1cgymedB194