Cucsa.120830 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.120830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Basic helix loop helix (BHLH) family transcription factor
Location	scaffold00998 : 2884232 .. 2884837 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAAACAGGGCAAAAACGAGGACGGAAGCCGAATATGAGTAAAGAAAATGCAATGAATCACGTAGAAGCAGAACGACAGAGAAGGGAGAAACTAAACAATAGATTCTACGCATTACGATCTGTAGTACCAAATGTATCGAGAATGGATAAAGCTTCATTGCTTTCTGATGCGGTTTCGTATATAAATGCATTGAAGGCGAAAGTGGAGGAGATGGAGTTGCAATTGAGAGAGTCGAAGAAATCGAGAGACGAGGGTGGGGATAATCAAAGCACCACAACGACGTCAGAGGAGCTAATGAAGGGGAACAGTGGCGGAGGTGTAACGACGCCAACGATAACGACAACGACAACAACGATGACACGGTTTGATGTGGAGGTGAAAATCATTGGTAGGGATGCAATGGTGAGAGTTCAATCTCAGAATTTGAACTTCCCTTCGGCGATTGTAATGGGTGTATTTCGAGATATGGAGTTTGAAATTCAGCATGCGAGTATAACAAATGTGAATGATATTATGCTTCAAGATGTTTTGATTAAGCTTCCTCATGGTTTCTCTACAGATGAAGCTTTGAAAGCTGCTGTTTTGTCAAGaTTACATTAA

mRNA sequence

ATGAAAAAAACAGGGCAAAAACGAGGACGGAAGCCGAATATGAGTAAAGAAAATGCAATGAATCACGTAGAAGCAGAACGACAGAGAAGGGAGAAACTAAACAATAGATTCTACGCATTACGATCTGTAGTACCAAATGTATCGAGAATGGATAAAGCTTCATTGCTTTCTGATGCGGTTTCGTATATAAATGCATTGAAGGCGAAAGTGGAGGAGATGGAGTTGCAATTGAGAGAGTCGAAGAAATCGAGAGACGAGGGTGGGGATAATCAAAGCACCACAACGACGTCAGAGGAGCTAATGAAGGGGAACAGTGGCGGAGGTGTAACGACGCCAACGATAACGACAACGACAACAACGATGACACGGTTTGATGTGGAGGTGAAAATCATTGGTAGGGATGCAATGGTGAGAGTTCAATCTCAGAATTTGAACTTCCCTTCGGCGATTGTAATGGGTGTATTTCGAGATATGGAGTTTGAAATTCAGCATGCGAGTATAACAAATGTGAATGATATTATGCTTCAAGATGTTTTGATTAAGCTTCCTCATGGTTTCTCTACAGATGAAGCTTTGAAAGCTGCTGTTTTGTCAAGATTACATTAA

Coding sequence (CDS)

ATGAAAAAAACAGGGCAAAAACGAGGACGGAAGCCGAATATGAGTAAAGAAAATGCAATGAATCACGTAGAAGCAGAACGACAGAGAAGGGAGAAACTAAACAATAGATTCTACGCATTACGATCTGTAGTACCAAATGTATCGAGAATGGATAAAGCTTCATTGCTTTCTGATGCGGTTTCGTATATAAATGCATTGAAGGCGAAAGTGGAGGAGATGGAGTTGCAATTGAGAGAGTCGAAGAAATCGAGAGACGAGGGTGGGGATAATCAAAGCACCACAACGACGTCAGAGGAGCTAATGAAGGGGAACAGTGGCGGAGGTGTAACGACGCCAACGATAACGACAACGACAACAACGATGACACGGTTTGATGTGGAGGTGAAAATCATTGGTAGGGATGCAATGGTGAGAGTTCAATCTCAGAATTTGAACTTCCCTTCGGCGATTGTAATGGGTGTATTTCGAGATATGGAGTTTGAAATTCAGCATGCGAGTATAACAAATGTGAATGATATTATGCTTCAAGATGTTTTGATTAAGCTTCCTCATGGTTTCTCTACAGATGAAGCTTTGAAAGCTGCTGTTTTGTCAAGaTTACATTAA

Protein sequence

MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVSYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLIKLPHGFSTDEALKAAVLSRLH*

Homology

[Close]

BLAST of Cucsa.120830 vs. Swiss-Prot
Match: MYC2_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=MYC2 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 4.2e-40
Identity = 91/200 (45.50%), Postives = 130/200 (65.00%), Query Frame = 1


Query: 1   MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 60
           ++K  +KRGRKP   +E  +NHVEAERQRREKLN RFYALR+VVPNVS+MDKASLL DA+
Sbjct: 432 VEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 491

Query: 61  SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT 120
           +YIN LK+KV + E +  + K   +E     +    S       SGG +++   +     
Sbjct: 492 AYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASA------SGGDMSSSCSSIKPVG 551

Query: 121 MTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI 180
           M   ++EVKIIG DAM+RV+S   N P+A +M    D+E E+ HAS++ VND+M+Q   +
Sbjct: 552 M---EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATV 611

Query: 181 KLPHGFSTDEALKAAVLSRL 201
           K+     T E L+A+++S++
Sbjct: 612 KMGFRIYTQEQLRASLISKI 622

[Close]

BLAST of Cucsa.120830 vs. Swiss-Prot
Match: MYC3_ARATH (Transcription factor MYC3 OS=Arabidopsis thaliana GN=MYC3 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.1e-39
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           +K  +KRGRKP   +E  +NHVEAERQRREKLN RFY+LR+VVPNVS+MDKASLL DA+S
Sbjct: 396 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 455

Query: 62  YINALKAKVEEMELQLRESKKSRD----EGGDNQSTTTTSEELMKGNSGGGVTTPTITTT 121
           YIN LK+K+++ E    E +K  D    EG + +   + ++E    N            +
Sbjct: 456 YINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQ----------DS 515

Query: 122 TTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQD 181
           T +    +++VKIIG D M+RVQ    + P A  M   ++++ E+ HAS++ VND+M+Q 
Sbjct: 516 TASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQ 575

Query: 182 VLIKLPHGFSTDEALKAAVLSRL 201
             +K+   F   + LK A+++++
Sbjct: 576 ATVKMGSQFFNHDQLKVALMTKV 588

[Close]

BLAST of Cucsa.120830 vs. Swiss-Prot
Match: MYC4_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=MYC4 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-38
Identity = 84/199 (42.21%), Postives = 124/199 (62.31%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           +K  +KRGRKP   +E  +NHVEAERQRREKLN RFY+LR+VVPNVS+MDKASLL DA+S
Sbjct: 397 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 456

Query: 62  YINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTTM 121
           YI+ LK+K+++ E    E +K  D          +S +  K           +   ++ +
Sbjct: 457 YISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRK----------CLNQESSVL 516

Query: 122 TRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLIK 181
              +V+VKIIG DAM+R+Q    N P A  M   ++++ E+ HAS++ VND+M+Q   +K
Sbjct: 517 IEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVK 576

Query: 182 LPHGFSTDEALKAAVLSRL 201
           + + F T + LK A+  ++
Sbjct: 577 MGNQFFTQDQLKVALTEKV 585

[Close]

BLAST of Cucsa.120830 vs. Swiss-Prot
Match: MYC2_ORYSJ (Transcription factor MYC2 OS=Oryza sativa subsp. japonica GN=MYC2 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-36
Identity = 86/206 (41.75%), Postives = 122/206 (59.22%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           +K  +KRGRKP   +E  +NHVEAERQRREKLN RFYALR+VVPNVS+MDKASLL DA+S
Sbjct: 505 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 564

Query: 62  YINALKAKV-------EEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTI 121
           YIN L+ K+       E ++ Q+   KK RD      S          G   GG     +
Sbjct: 565 YINELRGKLTALETDKETLQSQMESLKKERDARPPAPS---------GGGGDGGARCHAV 624

Query: 122 TTTTTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIM 181
                     ++E KI+G +AM+RVQ    N P+A +M   R+++ ++ HAS++ V D+M
Sbjct: 625 ----------EIEAKILGLEAMIRVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLM 684

Query: 182 LQDVLIKLPHGFSTDEALKAAVLSRL 201
           +Q V +K+     + + L AA+ +R+
Sbjct: 685 IQQVAVKMASRVYSQDQLNAALYTRI 691

[Close]

BLAST of Cucsa.120830 vs. Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36
Identity = 74/189 (39.15%), Postives = 128/189 (67.72%), Query Frame = 1


Query: 20  MNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVSYINALKAKVEEMELQLRE 79
           ++HVEAE+QRREKLN+RFYALR++VP VSRMDKASLLSDAVSYI +LK+K++++E ++++
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307

Query: 80  SKKSRDEGGDNQSTTTT--------SEELMKGNSGGGVTTPTITTTTTTMTRFDVEVKII 139
            K +  +  DN S+ T+        +++  K N G  +               +V+VKI+
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDL---------------EVQVKIV 367

Query: 140 GRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLIKLPHGFSTDEA 199
           G +A++RVQ++N+N P++ +M    +M+  +QHA+ + ++ +M+QDV++ +P G  +++ 
Sbjct: 368 GEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSEDR 421

Query: 200 LKAAVLSRL 201
           L+  ++  L
Sbjct: 428 LRTTLVRTL 421

[Close]

BLAST of Cucsa.120830 vs. TrEMBL
Match: A0A0A0KFN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107910 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.5e-105
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 1


Query: 1   MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 60
           MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV
Sbjct: 231 MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 290

Query: 61  SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT 120
           SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT
Sbjct: 291 SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT 350

Query: 121 MTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI 180
           MTRFDVEVKIIGRDAMVRVQS NLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI
Sbjct: 351 MTRFDVEVKIIGRDAMVRVQSHNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI 410

Query: 181 KLPHGFSTDEALKAAVLSRLH 202
           KLPHGFSTDEALKAAVLSRLH
Sbjct: 411 KLPHGFSTDEALKAAVLSRLH 431

[Close]

BLAST of Cucsa.120830 vs. TrEMBL
Match: W9RDL1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023447 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 115/211 (54.50%), Postives = 156/211 (73.93%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           K+  +KRGRKP + ++  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAVS
Sbjct: 313 KRAPKKRGRKPGLGRDTPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVS 372

Query: 62  YINALKAKVEEMELQL---RESKKSRDEGG-----DNQSTTTTSEELMKGNSGGGVT-TP 121
           YIN LKAK++++E QL   + +KK + E       DNQSTTT+ ++    NS      + 
Sbjct: 373 YINELKAKIDDLESQLQRDQSNKKVKLEAADTMSLDNQSTTTSVDQTKPPNSNSSSNKSN 432

Query: 122 TITTTTTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVND 181
            I + T  +   ++EVKIIG DAM+RVQS+N+N+PSA +MG  RD+EF++ HAS++++ND
Sbjct: 433 NINSVTGNINGLEIEVKIIGTDAMIRVQSENVNYPSARLMGALRDLEFQVHHASVSSIND 492

Query: 182 IMLQDVLIKLPHG---FSTDEALKAAVLSRL 201
           +MLQDV++K+P G     T E LK+A+L RL
Sbjct: 493 LMLQDVVVKIPEGIVLMRTQEGLKSALLRRL 523

[Close]

BLAST of Cucsa.120830 vs. TrEMBL
Match: A0A0D2P785_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G111800 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.0e-53
Identity = 118/205 (57.56%), Postives = 157/205 (76.59%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           K+T +KRGRKP + +E  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAVS
Sbjct: 295 KRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVS 354

Query: 62  YINALKAKVEEMELQL-RESKKSRDE---GGDNQS--TTTTSEELMKGNSGGGVTTPTIT 121
           YI  LKAK++E+E QL RE KK + E     DNQS  TTTTSEE  +       T P+ +
Sbjct: 355 YITDLKAKIDELESQLQRERKKVKVEMVDTMDNQSTTTTTTSEEEQQ------ATRPSYS 414

Query: 122 TTTTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIML 181
           +  T  +  ++EVKI+  DAM+RV S+N+N+P+A +MG  RD+EF++ HAS+++VND+ML
Sbjct: 415 SPGTG-SGIELEVKIMVNDAMIRVHSENVNYPAARLMGALRDLEFQVHHASMSSVNDLML 474

Query: 182 QDVLIKLPHGFSTDEALKAAVLSRL 201
           QD++++LP G  T+E LK+A+L RL
Sbjct: 475 QDIVVRLPDGLRTEEGLKSALLRRL 492

[Close]

BLAST of Cucsa.120830 vs. TrEMBL
Match: A0A061DS37_THECC (Basic helix-loop-helix DNA-binding family protein OS=Theobroma cacao GN=TCM_005064 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.0e-53
Identity = 115/204 (56.37%), Postives = 153/204 (75.00%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           K+T +KRGRKP + +E  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAVS
Sbjct: 301 KRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVS 360

Query: 62  YINALKAKVEEMELQL-RESKKSRDE---GGDNQSTTTTSEELMK-GNSGGGVTTPTITT 121
           YIN LKAK+EE+E QL RE KK + E     DNQSTTT+ ++  +  NS  G        
Sbjct: 361 YINELKAKIEELESQLQRECKKVKVEMVDAMDNQSTTTSVDQAARPSNSSSG-------- 420

Query: 122 TTTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQ 181
            T      + ++KI+G DAM+RVQS+N+N+PSA +M   RD+EF++ HAS++ VN++MLQ
Sbjct: 421 -TAGSGGLEFDIKIMGNDAMIRVQSENVNYPSARLMIALRDLEFQVHHASMSCVNELMLQ 480

Query: 182 DVLIKLPHGFSTDEALKAAVLSRL 201
           D+++++P G  T+E LK+A+L RL
Sbjct: 481 DIVVRVPDGLRTEEGLKSALLRRL 495

[Close]

BLAST of Cucsa.120830 vs. TrEMBL
Match: M5X2D4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004680mg PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-52
Identity = 111/200 (55.50%), Postives = 153/200 (76.50%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           K+T +KRGRKP + ++  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAVS
Sbjct: 302 KRTPKKRGRKPGLGRDTPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVS 361

Query: 62  YINALKAKVEEMELQL-RESKKSRDEGGDN---QSTTTTSEELMKGNSGGGVTTPTITTT 121
           YIN LK KV+E+E Q+ RESKK + E GDN   QSTTT+ E++ K  S           +
Sbjct: 362 YINELKTKVDELESQVQRESKKVKVETGDNLDIQSTTTSVEQIAKPPS-----------S 421

Query: 122 TTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQD 181
           +   +  +VEVKI+G DAM+RVQS+N+N+PSA +M   RD+E +I HAS++ +N++MLQD
Sbjct: 422 SANGSGLEVEVKIVGTDAMIRVQSENVNYPSARLMAALRDLELQIHHASLSCINELMLQD 481

Query: 182 VLIKLPHGFSTDEALKAAVL 198
           +++K+P    ++++LK+A+L
Sbjct: 482 IVLKVPENMRSEDSLKSALL 490

[Close]

BLAST of Cucsa.120830 vs. TAIR10
Match: AT1G32640.1 (AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 91/200 (45.50%), Postives = 130/200 (65.00%), Query Frame = 1


Query: 1   MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 60
           ++K  +KRGRKP   +E  +NHVEAERQRREKLN RFYALR+VVPNVS+MDKASLL DA+
Sbjct: 432 VEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 491

Query: 61  SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT 120
           +YIN LK+KV + E +  + K   +E     +    S       SGG +++   +     
Sbjct: 492 AYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASA------SGGDMSSSCSSIKPVG 551

Query: 121 MTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI 180
           M   ++EVKIIG DAM+RV+S   N P+A +M    D+E E+ HAS++ VND+M+Q   +
Sbjct: 552 M---EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATV 611

Query: 181 KLPHGFSTDEALKAAVLSRL 201
           K+     T E L+A+++S++
Sbjct: 612 KMGFRIYTQEQLRASLISKI 622

[Close]

BLAST of Cucsa.120830 vs. TAIR10
Match: AT5G46760.1 (AT5G46760.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 162.2 bits (409), Expect = 3.4e-40
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           +K  +KRGRKP   +E  +NHVEAERQRREKLN RFY+LR+VVPNVS+MDKASLL DA+S
Sbjct: 396 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 455

Query: 62  YINALKAKVEEMELQLRESKKSRD----EGGDNQSTTTTSEELMKGNSGGGVTTPTITTT 121
           YIN LK+K+++ E    E +K  D    EG + +   + ++E    N            +
Sbjct: 456 YINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQ----------DS 515

Query: 122 TTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQD 181
           T +    +++VKIIG D M+RVQ    + P A  M   ++++ E+ HAS++ VND+M+Q 
Sbjct: 516 TASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQ 575

Query: 182 VLIKLPHGFSTDEALKAAVLSRL 201
             +K+   F   + LK A+++++
Sbjct: 576 ATVKMGSQFFNHDQLKVALMTKV 588

[Close]

BLAST of Cucsa.120830 vs. TAIR10
Match: AT4G17880.1 (AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 161.0 bits (406), Expect = 7.7e-40
Identity = 84/199 (42.21%), Postives = 124/199 (62.31%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           +K  +KRGRKP   +E  +NHVEAERQRREKLN RFY+LR+VVPNVS+MDKASLL DA+S
Sbjct: 397 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 456

Query: 62  YINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTTM 121
           YI+ LK+K+++ E    E +K  D          +S +  K           +   ++ +
Sbjct: 457 YISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRK----------CLNQESSVL 516

Query: 122 TRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLIK 181
              +V+VKIIG DAM+R+Q    N P A  M   ++++ E+ HAS++ VND+M+Q   +K
Sbjct: 517 IEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVK 576

Query: 182 LPHGFSTDEALKAAVLSRL 201
           + + F T + LK A+  ++
Sbjct: 577 MGNQFFTQDQLKVALTEKV 585

[Close]

BLAST of Cucsa.120830 vs. TAIR10
Match: AT4G00870.1 (AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 74/189 (39.15%), Postives = 128/189 (67.72%), Query Frame = 1


Query: 20  MNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVSYINALKAKVEEMELQLRE 79
           ++HVEAE+QRREKLN+RFYALR++VP VSRMDKASLLSDAVSYI +LK+K++++E ++++
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307

Query: 80  SKKSRDEGGDNQSTTTT--------SEELMKGNSGGGVTTPTITTTTTTMTRFDVEVKII 139
            K +  +  DN S+ T+        +++  K N G  +               +V+VKI+
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDL---------------EVQVKIV 367

Query: 140 GRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLIKLPHGFSTDEA 199
           G +A++RVQ++N+N P++ +M    +M+  +QHA+ + ++ +M+QDV++ +P G  +++ 
Sbjct: 368 GEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSEDR 421

Query: 200 LKAAVLSRL 201
           L+  ++  L
Sbjct: 428 LRTTLVRTL 421

[Close]

BLAST of Cucsa.120830 vs. TAIR10
Match: AT5G46830.1 (AT5G46830.1 NACL-inducible gene 1)

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-35
Identity = 85/201 (42.29%), Postives = 121/201 (60.20%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           KK G+KRGRKP   ++  +NHVEAER RREKLN+RFYALR+VVPNVS+MDK SLL DAV 
Sbjct: 324 KKKGKKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVC 383

Query: 62  YINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTTM 121
           YIN LK+K E +EL+    +   +E              +K  +G     P++       
Sbjct: 384 YINELKSKAENVELEKHAIEIQFNE--------------LKEIAGQRNAIPSVCKYEEKA 443

Query: 122 TR-FDVEVKII-GRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVL 181
           +    +EVKI+   DAMVRV+S+  + P A +M    D+E E+ HASI+ +ND+M+Q   
Sbjct: 444 SEMMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQAN 503

Query: 182 IKLPHGFSTDEALKAAVLSRL 201
           +K+       E L+  ++S++
Sbjct: 504 VKMGLRIYKQEELRDLLMSKI 510

[Close]

BLAST of Cucsa.120830 vs. NCBI nr
Match: gi|449445714|ref|XP_004140617.1| (PREDICTED: transcription factor MYC2-like [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 6.4e-105
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 1


Query: 1   MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 60
           MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV
Sbjct: 231 MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 290

Query: 61  SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT 120
           SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT
Sbjct: 291 SYINALKAKVEEMELQLRESKKSRDEGGDNQSTTTTSEELMKGNSGGGVTTPTITTTTTT 350

Query: 121 MTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI 180
           MTRFDVEVKIIGRDAMVRVQS NLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI
Sbjct: 351 MTRFDVEVKIIGRDAMVRVQSHNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQDVLI 410

Query: 181 KLPHGFSTDEALKAAVLSRLH 202
           KLPHGFSTDEALKAAVLSRLH
Sbjct: 411 KLPHGFSTDEALKAAVLSRLH 431

[Close]

BLAST of Cucsa.120830 vs. NCBI nr
Match: gi|470141822|ref|XP_004306627.1| (PREDICTED: transcription factor MYC2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54
Identity = 117/204 (57.35%), Postives = 151/204 (74.02%), Query Frame = 1


Query: 1   MKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 60
           +K+T +KRGRKP M ++  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAV
Sbjct: 289 LKRTPKKRGRKPGMGRDTPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAV 348

Query: 61  SYINALKAKVEEMELQL-RESKKSRDEGG---DNQSTTTTSEELMKGNSGGGVTTPTITT 120
           SYIN LKAKV+E+E QL RESKK + E     DNQSTTTT+             TP    
Sbjct: 349 SYINELKAKVDELESQLQRESKKVKVEMADNLDNQSTTTTASV-----EQTQTVTPDNNN 408

Query: 121 TTTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQ 180
                +  ++EVKI+G DAM+RVQS+N+N+PSA +M   RD+EF+I HAS++++ND+MLQ
Sbjct: 409 NNNNGSGLEIEVKIVGTDAMIRVQSENVNYPSARLMTAMRDLEFQIHHASLSSINDLMLQ 468

Query: 181 DVLIKLPHGFSTDEALKAAVLSRL 201
           D+++K+P     +E LKAA+L  L
Sbjct: 469 DIVVKVPDNMKNEEGLKAALLGIL 487

[Close]

BLAST of Cucsa.120830 vs. NCBI nr
Match: gi|703114528|ref|XP_010100678.1| (hypothetical protein L484_023447 [Morus notabilis])

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-54
Identity = 115/211 (54.50%), Postives = 156/211 (73.93%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           K+  +KRGRKP + ++  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAVS
Sbjct: 313 KRAPKKRGRKPGLGRDTPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVS 372

Query: 62  YINALKAKVEEMELQL---RESKKSRDEGG-----DNQSTTTTSEELMKGNSGGGVT-TP 121
           YIN LKAK++++E QL   + +KK + E       DNQSTTT+ ++    NS      + 
Sbjct: 373 YINELKAKIDDLESQLQRDQSNKKVKLEAADTMSLDNQSTTTSVDQTKPPNSNSSSNKSN 432

Query: 122 TITTTTTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVND 181
            I + T  +   ++EVKIIG DAM+RVQS+N+N+PSA +MG  RD+EF++ HAS++++ND
Sbjct: 433 NINSVTGNINGLEIEVKIIGTDAMIRVQSENVNYPSARLMGALRDLEFQVHHASVSSIND 492

Query: 182 IMLQDVLIKLPHG---FSTDEALKAAVLSRL 201
           +MLQDV++K+P G     T E LK+A+L RL
Sbjct: 493 LMLQDVVVKIPEGIVLMRTQEGLKSALLRRL 523

[Close]

BLAST of Cucsa.120830 vs. NCBI nr
Match: gi|657957697|ref|XP_008370350.1| (PREDICTED: transcription factor MYC2 [Malus domestica])

HSP 1 Score: 219.9 bits (559), Expect = 3.9e-54
Identity = 117/203 (57.64%), Postives = 153/203 (75.37%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           K+T +KRGRKP + ++  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAVS
Sbjct: 302 KRTPKKRGRKPGLGRDTPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVS 361

Query: 62  YINALKAKVEEMELQL-RESKKSRDEGG---DNQSTTTTSEELMKGNSGGGVTTPTITTT 121
           YIN LK KV+E+E Q+ RESKK + E G   DNQSTTT+ E+    NS           +
Sbjct: 362 YINELKXKVDELESQVQRESKKVKVETGDNLDNQSTTTSVEQTRPPNS-----------S 421

Query: 122 TTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQD 181
            +  T F+ EVKI+G DAM+RVQS N+N+PSA +M   RD+EFEI HAS++ +N++MLQD
Sbjct: 422 ASGSTGFETEVKIVGSDAMIRVQSANVNYPSARLMAALRDLEFEIHHASLSCMNELMLQD 481

Query: 182 VLIKLPHGFSTDEALKAAVLSRL 201
           V++K+P    ++E++KAA+L  L
Sbjct: 482 VVVKVPBNMRSEESIKAALLKIL 493

[Close]

BLAST of Cucsa.120830 vs. NCBI nr
Match: gi|694400749|ref|XP_009375455.1| (PREDICTED: transcription factor MYC2-like [Pyrus x bretschneideri])

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53
Identity = 116/203 (57.14%), Postives = 154/203 (75.86%), Query Frame = 1


Query: 2   KKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVS 61
           K+T +KRGRKP + ++  +NHVEAERQRREKLN+RFYALR+VVPNVSRMDKASLLSDAVS
Sbjct: 302 KRTPKKRGRKPGLGRDTPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVS 361

Query: 62  YINALKAKVEEMELQL-RESKKSRDEGG---DNQSTTTTSEELMKGNSGGGVTTPTITTT 121
           YIN LK+KV+E+E Q+ RESKK + E G   DNQSTTT+ E+    NS           +
Sbjct: 362 YINELKSKVDELESQVQRESKKVKVETGDNLDNQSTTTSVEQTRPPNS-----------S 421

Query: 122 TTTMTRFDVEVKIIGRDAMVRVQSQNLNFPSAIVMGVFRDMEFEIQHASITNVNDIMLQD 181
            +  T  ++EVKI+G DAM+RVQS N+N+PSA +M   RD+EFEI HAS++ +N++MLQD
Sbjct: 422 ASGSTGLEMEVKIVGSDAMIRVQSANVNYPSARLMAALRDLEFEIHHASLSCMNELMLQD 481

Query: 182 VLIKLPHGFSTDEALKAAVLSRL 201
           V++K+P    ++E++KAA+L  L
Sbjct: 482 VVVKVPDNMRSEESIKAALLKIL 493

The following BLAST results are available for this feature:

BLAST of Cucsa.120830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYC2_ARATH	4.2e-40	45.50	Transcription factor MYC2 OS=Arabidopsis thaliana GN=MYC2 PE=1 SV=2	[more]
MYC3_ARATH	6.1e-39	41.87	Transcription factor MYC3 OS=Arabidopsis thaliana GN=MYC3 PE=1 SV=1	[more]
MYC4_ARATH	1.4e-38	42.21	Transcription factor MYC4 OS=Arabidopsis thaliana GN=MYC4 PE=1 SV=1	[more]
MYC2_ORYSJ	2.2e-36	41.75	Transcription factor MYC2 OS=Oryza sativa subsp. japonica GN=MYC2 PE=1 SV=1	[more]
BH014_ARATH	3.7e-36	39.15	Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1	[more]

BLAST of Cucsa.120830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFN7_CUCSA	4.5e-105	99.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107910 PE=4 SV=1	[more]
W9RDL1_9ROSA	2.1e-54	54.50	Uncharacterized protein OS=Morus notabilis GN=L484_023447 PE=4 SV=1	[more]
A0A0D2P785_GOSRA	4.0e-53	57.56	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G111800 PE=4 SV=1	[more]
A0A061DS37_THECC	4.0e-53	56.37	Basic helix-loop-helix DNA-binding family protein OS=Theobroma cacao GN=TCM_0050...	[more]
M5X2D4_PRUPE	1.5e-52	55.50	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004680mg PE=4 SV=1	[more]

BLAST of Cucsa.120830 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32640.1	2.4e-41	45.50	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G46760.1	3.4e-40	41.87	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT4G17880.1	7.7e-40	42.21	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT4G00870.1	2.1e-37	39.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G46830.1	3.3e-35	42.29	NACL-inducible gene 1	[more]

BLAST of Cucsa.120830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445714\|ref\|XP_004140617.1\|	6.4e-105	99.50	PREDICTED: transcription factor MYC2-like [Cucumis sativus]	[more]
gi\|470141822\|ref\|XP_004306627.1\|	1.0e-54	57.35	PREDICTED: transcription factor MYC2 [Fragaria vesca subsp. vesca]	[more]
gi\|703114528\|ref\|XP_010100678.1\|	3.0e-54	54.50	hypothetical protein L484_023447 [Morus notabilis]	[more]
gi\|657957697\|ref\|XP_008370350.1\|	3.9e-54	57.64	PREDICTED: transcription factor MYC2 [Malus domestica]	[more]
gi\|694400749\|ref\|XP_009375455.1\|	1.1e-53	57.14	PREDICTED: transcription factor MYC2-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.120830.1	Cucsa.120830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 21..83 score: 3.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 20..66 score: 6.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 23..72 score: 2.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 17..66 score: 1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 15..81 score: 7.72
None	No IPR available	unknown	Coil	Coil	coord: 63..83 score: -coord: 16..36 scor
None	No IPR available	PANTHER	PTHR11514	MYC	coord: 1..200 score: 4.8
None	No IPR available	PANTHER	PTHR11514:SF40	TRANSCRIPTION FACTOR BHLH14	coord: 1..200 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.120830	Cla006692	Watermelon (97103) v1	cgywmB190
Cucsa.120830	Csa6G107910	Cucumber (Chinese Long) v2	cgycuB155
Cucsa.120830	MELO3C022250	Melon (DHL92) v3.5.1	cgymeB176
Cucsa.120830	ClCG06G002770	Watermelon (Charleston Gray)	cgywcgB188
Cucsa.120830	CSPI06G08560	Wild cucumber (PI 183967)	cgycpiB156
Cucsa.120830	CmaCh17G005040	Cucurbita maxima (Rimu)	cgycmaB0295
Cucsa.120830	Lsi09G016530	Bottle gourd (USVL1VR-Ls)	cgylsiB169
Cucsa.120830	Cp4.1LG12g04380	Cucurbita pepo (Zucchini)	cgycpeB0286
Cucsa.120830	MELO3C022250.2	Melon (DHL92) v3.6.1	cgymedB174
Cucsa.120830	CsaV3_6G008940	Cucumber (Chinese Long) v3	cgycucB159
Cucsa.120830	Cla97C06G112130	Watermelon (97103) v2	cgywmbB183
Cucsa.120830	Bhi12G001943	Wax gourd	cgywgoB205

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.120830	Cucurbita maxima (Rimu)	cgycmaB0314
Cucsa.120830	Cucurbita moschata (Rifu)	cgycmoB0292
Cucsa.120830	Cucurbita moschata (Rifu)	cgycmoB0311
Cucsa.120830	Cucurbita pepo (Zucchini)	cgycpeB0296
Cucsa.120830	Bottle gourd (USVL1VR-Ls)	cgylsiB171
Cucsa.120830	Silver-seed gourd	carcgyB0095
Cucsa.120830	Silver-seed gourd	carcgyB1018