Cucsa.118300 (gene) Cucumber (Gy14) v1

NameCucsa.118300
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00998 : 101409 .. 102096 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTCTCTTTCTATGCCCCGAAGTTGTATCTCTCTTTCGATCAAATTCATATGTTCCCCATAAAAAATGCTTGTTTTCTCACAATTTACTGGTGTTAGTTTTCATCTTTCCCATGTAAACATTTAAATTCTTAGCCAAATTTCAAATTCCAAATTCCAAATTCAAGTTCTCAAAAATAGGTTCAGATTTTGAATACAGTCCAAACACAAGTAGGAAACCAATTGGTAGAAGTAGTGTGAATAATCCATTAAGTAAATAGTTATCAGCCGGAGCCTTAGAAAATATGTCGGGGAACAGGTAATTAACAACCACAACATTTAGGAAGGAACTCAATGATACTGTGGGCAACAATTCAGTTCAATTCAAGGCTCTTCCACACACATCGGAGTGTTAAGAAACCAAAGATCTATAACACTCCGAAGCTTATTCAGACCTCAACACAACAGAAAAGGAAAATGACGAATAAAGATAAAGATTGTTCCAGAAATATTAGGAGATGCGCAATCATCCATAAGATACAGAAATTGGGTTGACATAAAAACACCCATTTAAAAAGAAATGTAACACATCAATTCATCAATCACCAAATGAGTTCAGAATGAATCAGTGTAAGAGTGAGCTAGAAAAATAGCAGATTGGATCATTAGAGTAGAATTAAAGCAGGAACAGGAAGAAAAAAAAaCTCGA

mRNA sequence

GTTCTCTCTTTCTATGCCCCGAAGTTGTATCTCTCTTTCGATCAAATTCATATGTTCCCCAtaaaaaatgcttgttttctcacaatttactggtgttagttttcatctttcccatgtaaacatttaaattcttagccaaatttcaaattccaaattccaaattcaagttctcaaaaataggttcagattttgaatacagtccaaacacaagtaggaaaccaattggtagaagtagtgtgaataatccattaagtaaatagttatcaGCCGGAGCCTTAGAAAATATGTCGGGGAACAGGTAATTAACAACCACAACATTTAGGAAGGAACTCAATGATACTGTGGGCAACAATTCAGTTCAATTCAAGGCTCTTCCACACACATCGGAGTGTTAAGAAACCAAAGATCTATAACACTCCGAAGCTTATTCAGACCTCAACACAACAGAAAAGGAAAATGACGAATAAAGATAAAGATTGTTCCAGAAATATTAGGAGATGCGCAATCATCCATAAGATACAGAAATTGGGTTGACATAAAAACACCCATTTAAAAAGAAATGTAACACATCAATTCATCAATCACCAAATGAGTTCAGAATGAATCAGTGTAAGAGTGAGCTAGAAAAATAGCAGATTGGATCATTAGAGTAGAATTAAAGCAGGAACAGGAAGAAAAAAAAACTCGA

Coding sequence (CDS)

ATGATACTGTGGGCAACAATTCAGTTCAATTCAAGGCTCTTCCACACACATCGGAGTGTTAAGAAACCAAAGATCTATAACACTCCGAAGCTTATTCAGACCTCAACACAACAGAAAAGGAAAATGACGAATAAAGATAAAGATTGTTCCAGAAATATTAGGAGATGCGCAATCATCCATAAGATACAGAAATTGGGTTGA

Protein sequence

MILWATIQFNSRLFHTHRSVKKPKIYNTPKLIQTSTQQKRKMTNKDKDCSRNIRRCAIIHKIQKLG*
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.118300.1Cucsa.118300.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.118300MELO3C035131.2Melon (DHL92) v3.6.1cgymedB173
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.118300Cucumber (Chinese Long) v3cgycucB159
Cucsa.118300Cucumber (Chinese Long) v3cgycucB161
Cucsa.118300Watermelon (97103) v2cgywmbB174
Cucsa.118300Watermelon (97103) v2cgywmbB184
Cucsa.118300Wax gourdcgywgoB209
Cucsa.118300Wax gourdcgywgoB213
Cucsa.118300Cucumber (Gy14) v1cgycgyB071
Cucsa.118300Cucurbita maxima (Rimu)cgycmaB0292
Cucsa.118300Cucurbita maxima (Rimu)cgycmaB0298
Cucsa.118300Cucurbita maxima (Rimu)cgycmaB0299
Cucsa.118300Cucurbita maxima (Rimu)cgycmaB0312
Cucsa.118300Cucurbita moschata (Rifu)cgycmoB0289
Cucsa.118300Cucurbita moschata (Rifu)cgycmoB0295
Cucsa.118300Cucurbita moschata (Rifu)cgycmoB0296
Cucsa.118300Cucurbita moschata (Rifu)cgycmoB0309
Cucsa.118300Wild cucumber (PI 183967)cgycpiB156
Cucsa.118300Wild cucumber (PI 183967)cgycpiB158
Cucsa.118300Cucumber (Chinese Long) v2cgycuB155
Cucsa.118300Cucumber (Chinese Long) v2cgycuB157
Cucsa.118300Melon (DHL92) v3.5.1cgymeB180
Cucsa.118300Melon (DHL92) v3.5.1cgymeB182
Cucsa.118300Watermelon (Charleston Gray)cgywcgB178
Cucsa.118300Watermelon (Charleston Gray)cgywcgB179
Cucsa.118300Watermelon (97103) v1cgywmB181
Cucsa.118300Watermelon (97103) v1cgywmB182
Cucsa.118300Cucurbita pepo (Zucchini)cgycpeB0288
Cucsa.118300Cucurbita pepo (Zucchini)cgycpeB0290
Cucsa.118300Cucurbita pepo (Zucchini)cgycpeB0297
Cucsa.118300Cucurbita pepo (Zucchini)cgycpeB0302
Cucsa.118300Bottle gourd (USVL1VR-Ls)cgylsiB176
Cucsa.118300Bottle gourd (USVL1VR-Ls)cgylsiB180
Cucsa.118300Melon (DHL92) v3.6.1cgymedB179
Cucsa.118300Silver-seed gourdcarcgyB0031
Cucsa.118300Silver-seed gourdcarcgyB0391
Cucsa.118300Silver-seed gourdcarcgyB0451
Cucsa.118300Silver-seed gourdcarcgyB0610