Cucsa.113190 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGTGAATTTTATGATGGTTTCCTGGCAAAGCCGCCATGTGCAGTATACGGTAGAGTATATGAATTGTCGCGGAAGATTCCTCCCATTCTTCAAGTGAAGCTAGTTAGTCGTTCTGATATTTGGAATGATCTATTTCATGATGAATGTCCGGATCTTGCTGATGTTGCCTTGTACTTCTTTCCGTGCAATATTGAAAGGTTTGTTATGAGTTTGGATTTAGTGGATACAATTCCACTTATTGTATAGCCATGTAAAAACAATTGTCGATTTAAGTGTAGGTCCAGAAAGAACAACTCTTGCCTATTTGAACTCATGGAGAGAGAAGATTTATTGATAAGAAGTCTTGTTGACGGTGCAGAGATGGTTCTATTTACATGTAGACAGCTGGATCGCCTCTCACAGTGTAAATGCTTTTACATTCGTTATTTTCCTGACATTCTTTAGTGTATGTAACCATTGACATCCCGAAGAGATGCAATTGGCTCGCATTTGATATTCTAAAGTTGGTTCATTGATTTTTAATTAATAACATTGGGTTTACTTGTGCTAGCTTTATGACATGTGTGCAGCTCTTTTTGCAGATATTATCAACATGTTTAATGCCGAATACCTCATTTTCGGAGTCTTCCGTGAAATTAAAGACTACCAGTCTCCTTTTCCTGTGTCACAGTATGGTCCTGCAGTTCCTTCAGTAGAATCTAATTCCAAAGTTCACCTACGGGAGTTCACGTCAAAGAAAACTGGAAAGCACGATGATGACAATGCCGTTAAAAGGGAAATTGACATCGAGGGTGGAAAGTCTTCAGCTGCAAAGGATGTAGACTCTACCATTCAACGATTACTCTTAGAATTTGGGTCACAAAAACCTAAAGATTCCGATGACATTACGTCAAACATGAATGCTCAGAAAAGAGACGAGGTAGAAAAATCTCACACTCGCTGCCGAACTGAGCCTTTTCCTCTTGATTTGTTTACATTTTCTCGTCGCCGTTCAATAAAAaGAAAAAAAAaaGGATGAGCTAACCGAATGTTTCTTTAGTTTGTGTACGATGATGATACTAGAATCCTTCAACATCTAATCATTCTCTTTTCATTATTTTGCAAACCATATGACAGGAACGTACTCCAATCGCATCGACCGACTCCTACTCTCTGTCCGCGTCAAAAGTAAAGACCGAACATTCATCAGATACGAAGGCAGAAGGAAGTGA ATGGCTGGTGAATTTTATGATGGTTTCCTGGCAAAGCCGCCATGTGCAGTATACGGTAGAGTATATGAATTGTCGCGGAAGATTCCTCCCATTCTTCAAGTGAAGCTAGTTAGTCGTTCTGATATTTGGAATGATCTATTTCATGATGAATGTCCGGATCTTGCTGATGTTGCCTTGTACTTCTTTCCGTGCAATATTGAAAGGTCCAGAAAGAACAACTCTTGCCTATTTGAACTCATGGAGAGAGAAGATTTATTGATAAGAAGTCTTGTTGACGGTGCAGAGATGGTTCTATTTACATGTAGACAGCTGGATCGCCTCTCACAGTTGTATGTAACCATTGACATCCCGAAGAGATGCAATTGGCTCGCATTTGATATTCTAAAGGAAATTGACATCGAGGGTGGAAAGTCTTCAGCTGCAAAGGATGTAGACTCTACCATTCAACGATTACTCTTAGAATTTGGGTCACAAAAACCTAAAGATTCCGATGACATTACGTCAAACATGAATGCTCAGAAAAGAGACGAGGTAGAAAAATCTCACACTCGCTGCCGAACTGAGCCTTTTCCTCTTGATTTGTTTACATTTTCTCGTCGCCACCGAACATTCATCAGATACGAAGGCAGAAGGAAGTGA ATGGCTGGTGAATTTTATGATGGTTTCCTGGCAAAGCCGCCATGTGCAGTATACGGTAGAGTATATGAATTGTCGCGGAAGATTCCTCCCATTCTTCAAGTGAAGCTAGTTAGTCGTTCTGATATTTGGAATGATCTATTTCATGATGAATGTCCGGATCTTGCTGATGTTGCCTTGTACTTCTTTCCGTGCAATATTGAAAGGTCCAGAAAGAACAACTCTTGCCTATTTGAACTCATGGAGAGAGAAGATTTATTGATAAGAAGTCTTGTTGACGGTGCAGAGATGGTTCTATTTACATGTAGACAGCTGGATCGCCTCTCACAGTTGTATGTAACCATTGACATCCCGAAGAGATGCAATTGGCTCGCATTTGATATTCTAAAGGAAATTGACATCGAGGGTGGAAAGTCTTCAGCTGCAAAGGATGTAGACTCTACCATTCAACGATTACTCTTAGAATTTGGGTCACAAAAACCTAAAGATTCCGATGACATTACGTCAAACATGAATGCTCAGAAAAGAGACGAGGTAGAAAAATCTCACACTCGCTGCCGAACTGAGCCTTTTCCTCTTGATTTGTTTACATTTTCTCGTCGCCACCGAACATTCATCAGATACGAAGGCAGAAGGAAGTGA MAGEFYDGFLAKPPCAVYGRVYELSRKIPPILQVKLVSRSDIWNDLFHDECPDLADVALYFFPCNIERSRKNNSCLFELMEREDLLIRSLVDGAEMVLFTCRQLDRLSQLYVTIDIPKRCNWLAFDILKEIDIEGGKSSAAKDVDSTIQRLLLEFGSQKPKDSDDITSNMNAQKRDEVEKSHTRCRTEPFPLDLFTFSRRHRTFIRYEGRRK*
BLAST of Cucsa.113190 vs. TrEMBL
Match: A0A0A0LSU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039150 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73 Identity = 157/254 (61.81%), Postives = 171/254 (67.32%), Query Frame = 1
BLAST of Cucsa.113190 vs. TrEMBL
Match: U5FP97_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s03960g PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 4.4e-26 Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 1
BLAST of Cucsa.113190 vs. TrEMBL
Match: A0A067FRE8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041691mg PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24 Identity = 58/108 (53.70%), Postives = 80/108 (74.07%), Query Frame = 1
BLAST of Cucsa.113190 vs. TrEMBL
Match: A0A061FXR5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014255 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19 Identity = 49/103 (47.57%), Postives = 74/103 (71.84%), Query Frame = 1
BLAST of Cucsa.113190 vs. TrEMBL
Match: B9RLP2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1469880 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.0e-19 Identity = 67/197 (34.01%), Postives = 106/197 (53.81%), Query Frame = 1
BLAST of Cucsa.113190 vs. TAIR10
Match: AT5G61120.1 (AT5G61120.1 BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61090.1)) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12 Identity = 44/132 (33.33%), Postives = 74/132 (56.06%), Query Frame = 1
BLAST of Cucsa.113190 vs. NCBI nr
Match: gi|778657038|ref|XP_011650165.1| (PREDICTED: uncharacterized protein LOC101223019 [Cucumis sativus]) HSP 1 Score: 283.9 bits (725), Expect = 2.3e-73 Identity = 157/254 (61.81%), Postives = 171/254 (67.32%), Query Frame = 1
BLAST of Cucsa.113190 vs. NCBI nr
Match: gi|700208953|gb|KGN64049.1| (hypothetical protein Csa_1G039150 [Cucumis sativus]) HSP 1 Score: 283.9 bits (725), Expect = 2.3e-73 Identity = 157/254 (61.81%), Postives = 171/254 (67.32%), Query Frame = 1
BLAST of Cucsa.113190 vs. NCBI nr
Match: gi|659066548|ref|XP_008449671.1| (PREDICTED: uncharacterized protein LOC103491456 [Cucumis melo]) HSP 1 Score: 226.9 bits (577), Expect = 3.4e-56 Identity = 120/171 (70.18%), Postives = 131/171 (76.61%), Query Frame = 1
BLAST of Cucsa.113190 vs. NCBI nr
Match: gi|659066548|ref|XP_008449671.1| (PREDICTED: uncharacterized protein LOC103491456 [Cucumis melo]) HSP 1 Score: 83.6 bits (205), Expect = 4.7e-13 Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 1
HSP 2 Score: 126.3 bits (316), Expect = 6.3e-26 Identity = 60/106 (56.60%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of Cucsa.113190 vs. NCBI nr
Match: gi|566202359|ref|XP_006375053.1| (hypothetical protein POPTR_0014s03960g, partial [Populus trichocarpa]) HSP 1 Score: 126.3 bits (316), Expect = 6.3e-26 Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |