Cucsa.112000 (gene) Cucumber (Gy14) v1

NameCucsa.112000
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00953 : 656301 .. 658093 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTGGGTGCGTGTGTGTGGGAGGGCTGAGGGTAAGAGTGTATGAAAAACATTAGCAAAAACAAAACAGATCAAAAGAGAAAAAGAGAAGAAAGGAAAAGAAAAGAAAAGAGAAGAAGAAGAAAAAAGAAAAACAAAGAAAAGAAAAGAAAAGAAAAAAGACTGTTAAGAGAGGTTGTTACGGTGAAGGAGAGGAGCGGCGTGTGTTCAAGTGTCGTGCATGCATTTTATGCATCTGTTGCTTTGCATGCACTCTCTTCTCTCTCCATTGCACTGCTAACTGCTAAAAAGCCTTCTCCCCTGATCTCCTTCCATGGCCTCATTTCTCTCTCCCCATTCCTCCCCCTCTCTCACTCTCTTCTCTAAACCTCTTTTATTTTAGGGTTTTCTTTTGCTTGATCTCCACTTCTATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGGTATTTTCCCTTCTATTTCTTCATTTGATTTTCCCACCCCAGTTTCCTTAAATGCATTCCTTTCTTTCCCTTTTCCCTCTACCCATCTTATATATCAAAATTCCTAATATTGCCCTTCCCCCTTTAACTATCTTTTCATTTACCGAAAATTACTCGCATCCTCCTATCCAAAATTTCCAATTAATTAACTAGGTCATTTAGATTTATCAATTGGTGAATATTCGTTATGACTACTTTGAGTTGAGCTTGTACTACTTAATGTCCAATTTGAGTGTGTGAAGCATAAGATGTTCCATCCACATTGACCGATTAGATGAGAGTTTAATTTCAAAGTTTGGATTATGCCTCCACATTCTCTCTGGAAAATGGGTTGCTCAAAGGGCAGGATTGACAAGGAAAGTTTATACATGCATACACATAGAATTTAATTTCCTATTTCTTTTTAATAGTTATAATTAAAGAAAATATTCTCTTTTCTAGTTTCTATTCATTGCTGTCGAGAATTCTATTAAAGAATTTAAGAAGCGTGTATAACAGAGTTTCATACGGTGCAGAGGATTTTTCATTTCCTTTTATTACCACCCATACAGTTTAATCTCTTCATGTGAATCTCGCTATACATATTGAAGCTTAATTTCTCTCAGTTAATACTGATGTTTGTAATTTTGTTAGCTTTAGAGGGCAACATGTTTGTTTTCTTTTATTTTAATTTCTTTTTAAATCACTTTTTTTGTTTTGGGCTACTTTTTTTACCCAGTTTATTTAGTTCCGTAGGCTGTTTAGGCTTTTATTTCATGCTACGAGGGATCTATCTTTACTTTTTTTTTTTTTTTATTCATTGACAAGAAAAGATTTATATATTGTAGTGTTATGCTATATTAAAATTGATGTCACTATCTTCTGTATCTTCTAATCCTTCACTGTCCCTTCATACTGTGCGTGATTTAGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGGTATGCAAATGTGCTGGTAATGACCTTTAGTTTAAATGCCTTCTCTCAGTCTCAATTTATGTGTGTGCAAGTACGTATGTAGGAATCTGTCCATGTCCAATTCTAATTGTGATCTTATATGTGAAACATTTTTTCTATTTCAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGG

mRNA sequence

GTGTGGGTGCGTGTGTGTGGGAGGGCTGAGGGTAAGAGTGTATGAAAAACATTAGCAAAAACAAAACAGATCAAAAGAGAaaaagagaagaaaggaaaagaaaagaaaagagaagaagaagaaaaaagaaaaacaaagaaaagaaaagaaaagaaaaAAGACTGTTAAGAGAGGTTGTTACGGTGAAGGAGAGGAGCGGCGTGTGTTCAAGTGTCGTGCATGCATTTTATGCATCTGTTGCTTTGCATGCACTCTCTTCTCTCTCCATTGCACTGCTAACTGCTAAAAAGCCTTCTCCCCTGATCTCCTTCCATGGCCTCATTTCTCTCTCCCCATTCCTCCCCCTCTCTCACTCTCTTCTCTAAACCTCTTTTATTTTAGGGTTTTCTTTTGCTTGATCTCCACTTCTATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGG

Coding sequence (CDS)

ATGAAAAACATTAGCAAAAACAAAACAGATCAAAAGAGAAAAAGAGAAGAAAGGAAAAGAAAAGAAAAGAGAAGAAGAAGAAAAAAGAAAAACAAAGAAAAGAAAAGAAAAGAAAAAAGACTGTTAAGAGAGGTTGTTACGGTGAAGGAGAGGAGCGGCGTGTGTTCAAGTGTCGTGCATGCATTTTATGCATCTGTTGCTTTGCATGCACTCTCTTCTCTCTCCATTGCACTGCTAACTGCTAAAAAGCCTTCTCCCCTGATCTCCTTCCATGGCCTCATTTCTCTCTCCCCATTCCTCCCCCTCTCTCACTCTCTTCTCTAA

Protein sequence

MKNISKNKTDQKRKREERKRKEKRRRRKKKNKEKKRKEKRLLREVVTVKERSGVCSSVVHAFYASVALHALSSLSIALLTAKKPSPLISFHGLISLSPFLPLSHSLL*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.112000.1Cucsa.112000.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 6..51
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None