Cucsa.111250 (gene) Cucumber (Gy14) v1

NameCucsa.111250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00953 : 109310 .. 109805 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACCCAAAAAGCATAATATAGGCATGGGAATGGGGAGAAGAAGATCATCATATGAAAGGCTAAGAAGTGAAAACATTGGTGAATTAGTTGATGAACAAAGCAAGATGAAGATCAAGACCAATCCAACTATAATACTTGGAGGAAGAAGAAGAAGCAGTAATAATCTTGTAGAGTTATGGAAGAAAATGGAAGGAAAAGCAAAATTAGGATTGCCATTGAAGAGGTTTATAGCTACTTATGAAGCAATGATGCTTTGTTTTGCCCACAAGTTTGTGTTTCCTCAACAATGGTAAATCCTTTCATTTTTATTCTTTGTTTTGTGTGTTTAATAGGGTTAATGTTATAAGCTTAGTTGTTATATCATCTCCAAAATCTCCTTGGGTTCTTTGTTGTTCAATCATCTATTGTTCTACCAAATATAAAGATGGATAATTTTTTGCACTCAAATGTGCTAATATATATATATTTGCTTCGGTTGCATGTTTCAAGAATATA

mRNA sequence

AGACCCAAAAAGCATAATATAGGCATGGGAATGGGGAGAAGAAGATCATCATATGAAAGGCTAAGAAGTGAAAACATTGGTGAATTAGTTGATGAACAAAGCAAGATGAAGATCAAGACCAATCCAACTATAATACTTGGAGGAAGAAGAAGAAGCAGTAATAATCTTGTAGAGTTATGGAAGAAAATGGAAGGAAAAGCAAAATTAGGATTGCCATTGAAGAGGTTTATAGCTACTTATGAAGCAATGATGCTTTGTTTTGCCCACAAGTTTGTGTTTCCTCAACAATGGTAAATCCTTTCATTTTTATTCTTTGTTTTGTGTGTTTAATAGGGTTAATGTTATAAGCTTAGTTGTTATATCATCTCCAAAATCTCCTTGGGTTCTTTGTTGTTCAATCATCTATTGTTCTACCAAATATAAAGATGGATAATTTTTTGCACTCAAATGTGCTAATATATATATATTTGCTTCGGTTGCATGTTTCAAGAatata

Coding sequence (CDS)

ATGGGAATGGGGAGAAGAAGATCATCATATGAAAGGCTAAGAAGTGAAAACATTGGTGAATTAGTTGATGAACAAAGCAAGATGAAGATCAAGACCAATCCAACTATAATACTTGGAGGAAGAAGAAGAAGCAGTAATAATCTTGTAGAGTTATGGAAGAAAATGGAAGGAAAAGCAAAATTAGGATTGCCATTGAAGAGGTTTATAGCTACTTATGAAGCAATGATGCTTTGTTTTGCCCACAAGTTTGTGTTTCCTCAACAATGGTAA

Protein sequence

MGMGRRRSSYERLRSENIGELVDEQSKMKIKTNPTIILGGRRRSSNNLVELWKKMEGKAKLGLPLKRFIATYEAMMLCFAHKFVFPQQW*
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.111250.1Cucsa.111250.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.111250CSPI01G04030Wild cucumber (PI 183967)cgycpiB137
Cucsa.111250MELO3C029745.2Melon (DHL92) v3.6.1cgymedB159
Cucsa.111250Bhi01G002679Wax gourdcgywgoB175
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.111250Melon (DHL92) v3.6.1cgymedB154
Cucsa.111250Melon (DHL92) v3.6.1cgymedB157
Cucsa.111250Silver-seed gourdcarcgyB0449
Cucsa.111250Silver-seed gourdcarcgyB0668
Cucsa.111250Silver-seed gourdcarcgyB0897
Cucsa.111250Cucumber (Chinese Long) v3cgycucB143
Cucsa.111250Cucumber (Chinese Long) v3cgycucB145
Cucsa.111250Cucumber (Chinese Long) v3cgycucB150
Cucsa.111250Watermelon (97103) v2cgywmbB157
Cucsa.111250Watermelon (97103) v2cgywmbB160
Cucsa.111250Wax gourdcgywgoB178
Cucsa.111250Wax gourdcgywgoB185
Cucsa.111250Cucumber (Gy14) v1cgycgyB059
Cucsa.111250Cucumber (Gy14) v1cgycgyB065
Cucsa.111250Cucurbita maxima (Rimu)cgycmaB0256
Cucsa.111250Cucurbita maxima (Rimu)cgycmaB0259
Cucsa.111250Cucurbita maxima (Rimu)cgycmaB0265
Cucsa.111250Cucurbita maxima (Rimu)cgycmaB0267
Cucsa.111250Cucurbita moschata (Rifu)cgycmoB0255
Cucsa.111250Cucurbita moschata (Rifu)cgycmoB0258
Cucsa.111250Cucurbita moschata (Rifu)cgycmoB0263
Cucsa.111250Wild cucumber (PI 183967)cgycpiB139
Cucsa.111250Wild cucumber (PI 183967)cgycpiB144
Cucsa.111250Cucumber (Chinese Long) v2cgycuB137
Cucsa.111250Cucumber (Chinese Long) v2cgycuB139
Cucsa.111250Cucumber (Chinese Long) v2cgycuB144
Cucsa.111250Melon (DHL92) v3.5.1cgymeB154
Cucsa.111250Melon (DHL92) v3.5.1cgymeB157
Cucsa.111250Melon (DHL92) v3.5.1cgymeB160
Cucsa.111250Watermelon (Charleston Gray)cgywcgB161
Cucsa.111250Watermelon (Charleston Gray)cgywcgB165
Cucsa.111250Watermelon (97103) v1cgywmB164
Cucsa.111250Watermelon (97103) v1cgywmB167
Cucsa.111250Cucurbita pepo (Zucchini)cgycpeB0264
Cucsa.111250Cucurbita pepo (Zucchini)cgycpeB0250
Cucsa.111250Cucurbita pepo (Zucchini)cgycpeB0253
Cucsa.111250Cucurbita pepo (Zucchini)cgycpeB0258
Cucsa.111250Bottle gourd (USVL1VR-Ls)cgylsiB149
Cucsa.111250Bottle gourd (USVL1VR-Ls)cgylsiB155
Cucsa.111250Bottle gourd (USVL1VR-Ls)cgylsiB156