Cucsa.108550 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAGAAAATGGAAGAAAGGATTGAAACAGTGGAACAAGAACTCCAACGATTATCGATAATGGAAGAGAACTTGTTGTTGATCTCGAAAAGTATTCAAGAAATTAATATACAAACCGATAAACAGCAACAACAGCAACAGATGATCATGAAGTACATCGAAGGTATAATACGTGATGATAATGCAGCAGGAAAGAGAACCGAAAGTGTTGTGAGCCAAACGAAAGGGATCGAAACGATCGCTTCGGGAACATCAGACGGGACGAAGGACGGAAGGAGTGATGAGGAAAAACCGGCAGATCGGAGTAAGTTTAAGAAGGTGGAAATGACAGCCTTCAATGGAACTGATCTCTGCTCCTGGCTATTTCAAGCATATCGCTATTTCAAAATTCATGAGTTGTCAGATTCAGAGAAGCTAACGGGTGGCAGTTATTAGTTTTGATGGACCCGCTCTGGACTGGTACCGATCAAATGATGAATTAAAATGGTTTAAAAGATGGGAAGATCTAAAACAGAGGAAGTTAGTCCAATTTCGGACAATTCAAGATGGAACCTTGGTAGGCCGATTTTTAAAGATCAAACAGGAATCGACGGTGGAGTAATATAGGAATCAATTCAATAAATACTTAGCACCGGTGGCCTTCCTTCAGACGGTAGTATTAGAGGAGACCTTTATAAATGGGCTAAGCCCATGGTTGAAATCGAAAGTGGAGACTTTGGAGCCCAGATGATGAAGATGGCCTTGAAGATTGAAAACAGAGAGATGGTCCGAAAGGAATGTGGGTTGAGTAGCGCTTTAAGCGGGAACCAACAATTCAAATACAATAGTGCGAAAATACCCTCTACCACAACAACCCTTCAAAAACAATCAGAAGAAGTTCGGCCAATGAGGACAATAACTCTCAAAGGAGTGACACAGACGAAAAACGAAAGGACGGCCCTGCGAAACGCCTTTCCAATGCCGAATTTCAATCAAGAAGGGAGAAGGGATTGTGCTTCTAGTGCGATTAGAAGTATCATGTGGGACATAGATGTAAGATGAAAGAGCAAAAGGAGTTACGAATGCTGATGGTAAGAGAAAATGGTGAAGAGTTAGAGATTATTGAGGAAGAGTTTTTTtCTGCCGAAACAGAGGACAAGACCGTGGAAATAGGCAACGTGGAAAATCTGAATATTGAGTTGGCCATTAATTCCTTTGTAGGACTAAATAATCTGAGAACCATGAAAGTAAAACGAAAGATAAAAGAGACTAAAGTAGTGGTGCTCATTGACTGTGGAGCCACTCATAATTTTATTGCAGAAAACTTGATGTCCACCCTTAGTTTACCAATGAAGAAAACCTCCCATTATGGAGTGATTCTTGGGTCGAGAGCGGCAGTTAAAGGCAAGGGAATTTGCAGCCATGTAGAGGTTATGGTGGGGAATGGAAAATCGTGGACAGCTTCTTACCATTGGAGTTAGGGGGAGTAGATGTAATATTGAGAATGCAATGGCTACACTCTTTAAGGGTGACTGAATTTGACTAGAGGAACTTAGTAATGACATTCCAACATCACGGGAAGAAAGTAGTGGTAAAGGGGGGTCCGAGTCTCACAAATACCAGGGTAAGTTTGAAGTCTATGATGAAAACATGGGGAGCAGATGACCAAGGATATCTGGTGGAATATCGAGTCATGGAAGGCAACCTGTTCGTGAAGGGGCTGTATGATGAAGAAGAATTAACTGTGGACAACATGATTCCTCCTTTGCCAAGTAAATTCAGTGATGTATTCGATTGGTCAGAAGAACTACCCCTAAAAAGGGATATTAAGCACCACATATACATCAAGAAAGGAGTAGATCCAGTGAATGTCAGACCCTACCGTTATGCTCATCACCAAAAGGAAGAAATGGAGAGGTTAATGGATGAGATGCTGAAGACAGGAATCATTAGACCAAGCACTAGTCCCTATTCCAGGTCGGTCCTATTAGTTAAAAAGAAGGATGGAAGGTGGAGATTTTGCGTGGACTGTGGAGCCTTGAACAATGTGACCATCCAGGATAAGTTTCCAATTCTGGTGGTTGATGAGCTATTCGACGAGCTAAATGCAGCCAACATGTTTTCCAAGATCGATCTAAAGGTTGGTTATCATCAGATCAGAATGCACCCAAGAGCGTGGAGAAGACAGCTTTTCGCACACATGAGGAGCATTATAAGTTCTTGGTCATGCCATTTGGACTAACCAATGCTCCATCTACATTTCAAGCCTTGATGAATCACATTTTAAGCCGTATATGAAACAATTTGTGCTGGTTTTTTTTtATGACATTTTGGTATACGGTAGGGGAGTGGAAGAACATGTACAGCACTTGGAAGTAGTCTTGGAGATTCTAAGGAAGAATGAACTGTATGCTAATATAGCCAAGTGCAGTTTTGCGGAGGGAAGGATAGGATACTTGGGGCACTTCATATTTAAGAAAGGCATTAAGGTTGACAATGAGGAAATAAGAGCAATTAAGGAATGGCTGACTCCCGTAAGTGTCTGAGGTTTTTTGGGACTCACTGGCTACTATAGGAAGTTTGTGCAGAACTATGGTAGCATGGCAGCCCCTTTGACACAACTCTTAGAAACAGGAGCTTATCATTGGAATGAAAAAGCAAGTGTGGCATTTGAGAAACTTAAAACAACAATGATGACCTTACCCGTGCTAGCTATGCCAGATTTTAACCTCCCATTTGAAATAGAAATCGATGCTTCAGGGTTCAGT atggccaagaaaatggaagaaaggattgaaacagtggaacaagaactccaacgattatcgataatggaagagaacttgttgttgatctcgaaaagtattcaagaaattaatatacaaaccgataaacagcaacaacagcaacagatgatcatgaagtacatcgaaggtataatacgtgatgataatgcagcaggaaagagaaccgaaagtgttgtgagccaaacgaaagggatcgaaacgatcgcttcgggaacatcagaCGGGACGAAGGACGGAAGGAGTGATGAGGAAAAACCGGCAGATCGGAGTaagtttaagaaggtggaaatgacagccttcaatggaactgatctctgctcctggctatttcaagcatatcgctatttcaaaattcatgagttgtcagattcagagaagctaacggacggtagtattagaggagacctttataaatgggctaagcccatggttgaaatcgaaagtggagactttggagcccagatgatgaagatggccttgaagattgaaaacagagagatggtccgaaaggaatgtgggttgagtagcgctttaagcgggaaccaacaattcaaatacaatagtgcgaaaataccctctaccacaacaacccttcaaaaacaatcagaagaaaagtatcatgtgggacatagatgtaagatgaaagagcaaaaggagttacgaatgctgatggtaagagaaaatggtgaagagttagagattattgaggaagagtttttttctgccgaaacagaggacaagaccgtggaaataggcaacgtggaaaatctgaatattgagttggccattaattcctttgtaggactaaataatctgagaaccatgaaagtaaaacgaaagataaaagagactaaagtagtggtgctcattgactgtggagccactcataattttattgcagaaaacttgatgtccacccttagtttaccaatgaagaaaacctcccattatggagtgattcttgggtcgagagcggcagttaaaggcaagggaatttgcagccatgtagaggttatgttagggggagtagatgtaatattgagaatgcaatggctacactctttaagggggctgtatgatgaagaagaattaactgtggacaacatgattcctcctttgccaagtaaattcagtgatgtattcgattggtcagaagaactacccctaaaaagggatattaagcaccacatatacatcaagaaaggagtagatccagtgaatgtcagaccctaccgttatgctcatcaccaaaaggaagaaatggagaggttaatggatgagatgctgaagacaggaatcattagaccaagcactagtccctattccaggtcggtcctattagttaaaaagaaggatggaaggtggagattttgcgtggactgtggagccttgaacaatgtgaccatccaggataagtttccaattctggtggttgatgagctattcgacgagctaaatgcagccaacatgttttccaagatcgatctaaagccgtatatgaaacaatttgtgctggtttttttttatgacattttggtatacggtaggggagtggaagaacatgtacagcacttggaagtagtcttggagattctaaggaagaatgaactgtatgctaatatagccaagtgcagttttgcggagggaaggataggatacttggggcacttcatatttaagaaaggcattaaggttgacaatgaggaaataagagcaattaaggaatggctgactcccaactatggtagcatggcagcccctttgacacaactcttagaaacaggagcttatcattggaatgaaaaagcaagtgtggcatttgagaaacttaaaacaacaatgatgaccttacccgtgctagctatgccagattttaacctcccatttgaaatagaaatcgatgcttcagggttcagt ATGGCCAAGAAAATGGAAGAAAGGATTGAAACAGTGGAACAAGAACTCCAACGATTATCGATAATGGAAGAGAACTTGTTGTTGATCTCGAAAAGTATTCAAGAAATTAATATACAAACCGATAAACAGCAACAACAGCAACAGATGATCATGAAGTACATCGAAGGTATAATACGTGATGATAATGCAGCAGGAAAGAGAACCGAAAGTGTTGTGAGCCAAACGAAAGGGATCGAAACGATCGCTTCGGGAACATCAGACGGGACGAAGGACGGAAGGAGTGATGAGGAAAAACCGGCAGATCGGAGTAAGTTTAAGAAGGTGGAAATGACAGCCTTCAATGGAACTGATCTCTGCTCCTGGCTATTTCAAGCATATCGCTATTTCAAAATTCATGAGTTGTCAGATTCAGAGAAGCTAACGGACGGTAGTATTAGAGGAGACCTTTATAAATGGGCTAAGCCCATGGTTGAAATCGAAAGTGGAGACTTTGGAGCCCAGATGATGAAGATGGCCTTGAAGATTGAAAACAGAGAGATGGTCCGAAAGGAATGTGGGTTGAGTAGCGCTTTAAGCGGGAACCAACAATTCAAATACAATAGTGCGAAAATACCCTCTACCACAACAACCCTTCAAAAACAATCAGAAGAAAAGTATCATGTGGGACATAGATGTAAGATGAAAGAGCAAAAGGAGTTACGAATGCTGATGGTAAGAGAAAATGGTGAAGAGTTAGAGATTATTGAGGAAGAGTTTTTTtCTGCCGAAACAGAGGACAAGACCGTGGAAATAGGCAACGTGGAAAATCTGAATATTGAGTTGGCCATTAATTCCTTTGTAGGACTAAATAATCTGAGAACCATGAAAGTAAAACGAAAGATAAAAGAGACTAAAGTAGTGGTGCTCATTGACTGTGGAGCCACTCATAATTTTATTGCAGAAAACTTGATGTCCACCCTTAGTTTACCAATGAAGAAAACCTCCCATTATGGAGTGATTCTTGGGTCGAGAGCGGCAGTTAAAGGCAAGGGAATTTGCAGCCATGTAGAGGTTATGTTAGGGGGAGTAGATGTAATATTGAGAATGCAATGGCTACACTCTTTAAGGGGGCTGTATGATGAAGAAGAATTAACTGTGGACAACATGATTCCTCCTTTGCCAAGTAAATTCAGTGATGTATTCGATTGGTCAGAAGAACTACCCCTAAAAAGGGATATTAAGCACCACATATACATCAAGAAAGGAGTAGATCCAGTGAATGTCAGACCCTACCGTTATGCTCATCACCAAAAGGAAGAAATGGAGAGGTTAATGGATGAGATGCTGAAGACAGGAATCATTAGACCAAGCACTAGTCCCTATTCCAGGTCGGTCCTATTAGTTAAAAAGAAGGATGGAAGGTGGAGATTTTGCGTGGACTGTGGAGCCTTGAACAATGTGACCATCCAGGATAAGTTTCCAATTCTGGTGGTTGATGAGCTATTCGACGAGCTAAATGCAGCCAACATGTTTTCCAAGATCGATCTAAAGCCGTATATGAAACAATTTGTGCTGGTTTTTTTTtATGACATTTTGGTATACGGTAGGGGAGTGGAAGAACATGTACAGCACTTGGAAGTAGTCTTGGAGATTCTAAGGAAGAATGAACTGTATGCTAATATAGCCAAGTGCAGTTTTGCGGAGGGAAGGATAGGATACTTGGGGCACTTCATATTTAAGAAAGGCATTAAGGTTGACAATGAGGAAATAAGAGCAATTAAGGAATGGCTGACTCCCAACTATGGTAGCATGGCAGCCCCTTTGACACAACTCTTAGAAACAGGAGCTTATCATTGGAATGAAAAAGCAAGTGTGGCATTTGAGAAACTTAAAACAACAATGATGACCTTACCCGTGCTAGCTATGCCAGATTTTAACCTCCCATTTGAAATAGAAATCGATGCTTCAGGGTTCAGT MAKKMEERIETVEQELQRLSIMEENLLLISKSIQEINIQTDKQQQQQQMIMKYIEGIIRDDNAAGKRTESVVSQTKGIETIASGTSDGTKDGRSDEEKPADRSKFKKVEMTAFNGTDLCSWLFQAYRYFKIHELSDSEKLTDGSIRGDLYKWAKPMVEIESGDFGAQMMKMALKIENREMVRKECGLSSALSGNQQFKYNSAKIPSTTTTLQKQSEEKYHVGHRCKMKEQKELRMLMVRENGEELEIIEEEFFSAETEDKTVEIGNVENLNIELAINSFVGLNNLRTMKVKRKIKETKVVVLIDCGATHNFIAENLMSTLSLPMKKTSHYGVILGSRAAVKGKGICSHVEVMLGGVDVILRMQWLHSLRGLYDEEELTVDNMIPPLPSKFSDVFDWSEELPLKRDIKHHIYIKKGVDPVNVRPYRYAHHQKEEMERLMDEMLKTGIIRPSTSPYSRSVLLVKKKDGRWRFCVDCGALNNVTIQDKFPILVVDELFDELNAANMFSKIDLKPYMKQFVLVFFYDILVYGRGVEEHVQHLEVVLEILRKNELYANIAKCSFAEGRIGYLGHFIFKKGIKVDNEEIRAIKEWLTPNYGSMAAPLTQLLETGAYHWNEKASVAFEKLKTTMMTLPVLAMPDFNLPFEIEIDASGFS
BLAST of Cucsa.108550 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2) HSP 1 Score: 114.0 bits (284), Expect = 6.2e-24 Identity = 92/340 (27.06%), Postives = 136/340 (40.00%), Query Frame = 1
BLAST of Cucsa.108550 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3) HSP 1 Score: 112.5 bits (280), Expect = 1.8e-23 Identity = 91/340 (26.76%), Postives = 136/340 (40.00%), Query Frame = 1
BLAST of Cucsa.108550 vs. Swiss-Prot
Match: M860_ARATH (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana GN=AtMg00860 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.6e-16 Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = 1
BLAST of Cucsa.108550 vs. Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 9.9e-14 Identity = 50/164 (30.49%), Postives = 80/164 (48.78%), Query Frame = 1
HSP 2 Score: 67.0 bits (162), Expect = 8.6e-10 Identity = 46/151 (30.46%), Postives = 75/151 (49.67%), Query Frame = 1
BLAST of Cucsa.108550 vs. Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.1e-12 Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 1
BLAST of Cucsa.108550 vs. TrEMBL
Match: E5GB27_CUCME (Ty3-gypsy retroelement transposase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66 Identity = 150/297 (50.51%), Postives = 189/297 (63.64%), Query Frame = 1
BLAST of Cucsa.108550 vs. TrEMBL
Match: E5GB27_CUCME (Ty3-gypsy retroelement transposase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.6e-15 Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 1
HSP 2 Score: 253.4 bits (646), Expect = 7.3e-64 Identity = 163/429 (38.00%), Postives = 224/429 (52.21%), Query Frame = 1
BLAST of Cucsa.108550 vs. TrEMBL
Match: A0A087HDE5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G336600 PE=4 SV=1) HSP 1 Score: 34.3 bits (77), Expect = 6.9e+02 Identity = 17/56 (30.36%), Postives = 32/56 (57.14%), Query Frame = 1
HSP 2 Score: 239.6 bits (610), Expect = 1.1e-59 Identity = 170/498 (34.14%), Postives = 247/498 (49.60%), Query Frame = 1
BLAST of Cucsa.108550 vs. TrEMBL
Match: Q7X7Y2_ORYSJ (OSJNBa0065J03.2 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0065J03.2 PE=4 SV=2) HSP 1 Score: 238.0 bits (606), Expect = 3.2e-59 Identity = 145/409 (35.45%), Postives = 224/409 (54.77%), Query Frame = 1
BLAST of Cucsa.108550 vs. TrEMBL
Match: A0A151RXK4_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_031072 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 1.3e-57 Identity = 130/304 (42.76%), Postives = 175/304 (57.57%), Query Frame = 1
BLAST of Cucsa.108550 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein) HSP 1 Score: 89.4 bits (220), Expect = 9.2e-18 Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = 1
BLAST of Cucsa.108550 vs. TAIR10
Match: AT3G30770.1 (AT3G30770.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 51.2 bits (121), Expect = 2.8e-06 Identity = 24/61 (39.34%), Postives = 38/61 (62.30%), Query Frame = 1
BLAST of Cucsa.108550 vs. TAIR10
Match: AT3G29750.1 (AT3G29750.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 50.4 bits (119), Expect = 4.7e-06 Identity = 42/141 (29.79%), Postives = 61/141 (43.26%), Query Frame = 1
BLAST of Cucsa.108550 vs. NCBI nr
Match: gi|659115474|ref|XP_008457576.1| (PREDICTED: uncharacterized protein LOC103497241 [Cucumis melo]) HSP 1 Score: 381.7 bits (979), Expect = 2.5e-102 Identity = 224/461 (48.59%), Postives = 277/461 (60.09%), Query Frame = 1
BLAST of Cucsa.108550 vs. NCBI nr
Match: gi|727651125|ref|XP_010496259.1| (PREDICTED: uncharacterized protein LOC104773362 [Camelina sativa]) HSP 1 Score: 289.7 bits (740), Expect = 1.3e-74 Identity = 159/383 (41.51%), Postives = 237/383 (61.88%), Query Frame = 1
BLAST of Cucsa.108550 vs. NCBI nr
Match: gi|1000942925|ref|XP_015582108.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107262210 [Ricinus communis]) HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66 Identity = 174/534 (32.58%), Postives = 271/534 (50.75%), Query Frame = 1
BLAST of Cucsa.108550 vs. NCBI nr
Match: gi|307135777|gb|ADN33669.1| (ty3-gypsy retroelement transposase [Cucumis melo subsp. melo]) HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66 Identity = 150/297 (50.51%), Postives = 189/297 (63.64%), Query Frame = 1
BLAST of Cucsa.108550 vs. NCBI nr
Match: gi|307135777|gb|ADN33669.1| (ty3-gypsy retroelement transposase [Cucumis melo subsp. melo]) HSP 1 Score: 91.7 bits (226), Expect = 5.2e-15 Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 1
HSP 2 Score: 259.2 bits (661), Expect = 1.9e-65 Identity = 132/299 (44.15%), Postives = 184/299 (61.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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