Cucsa.104400 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGCCACTCAAAAACTCTCTTCCTTCAACTGCGAAATCAGAATCATAGAAGCCAAAAACATAGGGTTCAAATCTCCAAAGAATCTCTTCGTAAGATACTATCTTTCTACAGACCCCAACAAAAAAATTCGTCTCAACACAACACAAGTCTCTTCCATCTCCCACTTCGTATGGAACCAATCTTTTTGTTTGGAGTGTTTGGGTTCACAAGAATCTCTCCAAGCCCTCCAACAAGCAACCGTCGTCTTCGAGCTCCGGAGGGCTAAAACCCGAGCTGTTTTCGGGTCATCCTCTCAACTTTTGGGTAGGGCTGAGATTCCTTGGAGTGATGTTTTTGAGTCCCAAAATATGGAAATTGAGAGATGGGTGTCAATGGTTTGTGGTAATAAAAATGGATGTGTTTACAAGCAACCGAAATTGAAGGTGGGGATGAGAGTGAGAGTTCCAGAAGAAATGGAGATGGTGGACAAGAAGATAAAGAGAATTAGGAAGTGGAAGGATGAGTGTGGATGTTGTGAATCATCCAAAGTGGGTGATTTTTGTGGGGATTTTGAGCTCTTTGCCCTTACTGCTGCCATGGAATTCTTGTAG ATGGGCGCCACTCAAAAACTCTCTTCCTTCAACTGCGAAATCAGAATCATAGAAGCCAAAAACATAGGGTTCAAATCTCCAAAGAATCTCTTCGTAAGATACTATCTTTCTACAGACCCCAACAAAAAAATTCGTCTCAACACAACACAAGTCTCTTCCATCTCCCACTTCGTATGGAACCAATCTTTTTGTTTGGAGTGTTTGGGTTCACAAGAATCTCTCCAAGCCCTCCAACAAGCAACCGTCGTCTTCGAGCTCCGGAGGGCTAAAACCCGAGCTGTTTTCGGGTCATCCTCTCAACTTTTGGGTAGGGCTGAGATTCCTTGGAGTGATGTTTTTGAGTCCCAAAATATGGAAATTGAGAGATGGGTGTCAATGGTTTGTGGTAATAAAAATGGATGTGTTTACAAGCAACCGAAATTGAAGGTGGGGATGAGAGTGAGAGTTCCAGAAGAAATGGAGATGGTGGACAAGAAGATAAAGAGAATTAGGAAGTGGAAGGATGAGTGTGGATGTTGTGAATCATCCAAAGTGGGTGATTTTTGTGGGGATTTTGAGCTCTTTGCCCTTACTGCTGCCATGGAATTCTTGTAG ATGGGCGCCACTCAAAAACTCTCTTCCTTCAACTGCGAAATCAGAATCATAGAAGCCAAAAACATAGGGTTCAAATCTCCAAAGAATCTCTTCGTAAGATACTATCTTTCTACAGACCCCAACAAAAAAATTCGTCTCAACACAACACAAGTCTCTTCCATCTCCCACTTCGTATGGAACCAATCTTTTTGTTTGGAGTGTTTGGGTTCACAAGAATCTCTCCAAGCCCTCCAACAAGCAACCGTCGTCTTCGAGCTCCGGAGGGCTAAAACCCGAGCTGTTTTCGGGTCATCCTCTCAACTTTTGGGTAGGGCTGAGATTCCTTGGAGTGATGTTTTTGAGTCCCAAAATATGGAAATTGAGAGATGGGTGTCAATGGTTTGTGGTAATAAAAATGGATGTGTTTACAAGCAACCGAAATTGAAGGTGGGGATGAGAGTGAGAGTTCCAGAAGAAATGGAGATGGTGGACAAGAAGATAAAGAGAATTAGGAAGTGGAAGGATGAGTGTGGATGTTGTGAATCATCCAAAGTGGGTGATTTTTGTGGGGATTTTGAGCTCTTTGCCCTTACTGCTGCCATGGAATTCTTGTAG MGATQKLSSFNCEIRIIEAKNIGFKSPKNLFVRYYLSTDPNKKIRLNTTQVSSISHFVWNQSFCLECLGSQESLQALQQATVVFELRRAKTRAVFGSSSQLLGRAEIPWSDVFESQNMEIERWVSMVCGNKNGCVYKQPKLKVGMRVRVPEEMEMVDKKIKRIRKWKDECGCCESSKVGDFCGDFELFALTAAMEFL*
BLAST of Cucsa.104400 vs. TrEMBL
Match: A0A0A0KK37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500440 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 2.2e-109 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1
BLAST of Cucsa.104400 vs. TrEMBL
Match: A0A061DQB5_THECC (Nitric oxide synthase-interacting protein, putative OS=Theobroma cacao GN=TCM_001124 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.3e-45 Identity = 108/207 (52.17%), Postives = 135/207 (65.22%), Query Frame = 1
BLAST of Cucsa.104400 vs. TrEMBL
Match: B9SZ33_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0212500 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 5.6e-44 Identity = 104/202 (51.49%), Postives = 138/202 (68.32%), Query Frame = 1
BLAST of Cucsa.104400 vs. TrEMBL
Match: B9HFH0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s05510g PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.8e-43 Identity = 96/198 (48.48%), Postives = 137/198 (69.19%), Query Frame = 1
BLAST of Cucsa.104400 vs. TrEMBL
Match: A0A067ENB6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037412mg PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.0e-41 Identity = 101/204 (49.51%), Postives = 138/204 (67.65%), Query Frame = 1
BLAST of Cucsa.104400 vs. TAIR10
Match: AT5G65030.1 (AT5G65030.1 unknown protein) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32 Identity = 84/199 (42.21%), Postives = 119/199 (59.80%), Query Frame = 1
BLAST of Cucsa.104400 vs. TAIR10
Match: AT5G10210.1 (AT5G10210.1 C2 calcium-dependent membrane targeting (InterPro:IPR000008)) HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26 Identity = 76/204 (37.25%), Postives = 111/204 (54.41%), Query Frame = 1
BLAST of Cucsa.104400 vs. NCBI nr
Match: gi|778719160|ref|XP_011657970.1| (PREDICTED: uncharacterized protein LOC105435926 [Cucumis sativus]) HSP 1 Score: 402.9 bits (1034), Expect = 3.2e-109 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1
BLAST of Cucsa.104400 vs. NCBI nr
Match: gi|659081040|ref|XP_008441117.1| (PREDICTED: uncharacterized protein LOC103485345 [Cucumis melo]) HSP 1 Score: 199.9 bits (507), Expect = 4.1e-48 Identity = 99/109 (90.83%), Postives = 99/109 (90.83%), Query Frame = 1
BLAST of Cucsa.104400 vs. NCBI nr
Match: gi|590707319|ref|XP_007047971.1| (Nitric oxide synthase-interacting protein, putative [Theobroma cacao]) HSP 1 Score: 190.3 bits (482), Expect = 3.3e-45 Identity = 108/207 (52.17%), Postives = 135/207 (65.22%), Query Frame = 1
BLAST of Cucsa.104400 vs. NCBI nr
Match: gi|255580866|ref|XP_002531252.1| (PREDICTED: uncharacterized protein LOC8269055 [Ricinus communis]) HSP 1 Score: 185.7 bits (470), Expect = 8.1e-44 Identity = 104/202 (51.49%), Postives = 138/202 (68.32%), Query Frame = 1
BLAST of Cucsa.104400 vs. NCBI nr
Match: gi|743826387|ref|XP_011022787.1| (PREDICTED: uncharacterized protein LOC105124459 [Populus euphratica]) HSP 1 Score: 183.0 bits (463), Expect = 5.2e-43 Identity = 97/198 (48.99%), Postives = 136/198 (68.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|