Cucsa.102980 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAACACACAGCGCCCTAATCCGATCGTGATCATCGTTCCCAGTTGGTGTAAGGGTTCCATTCCAACACCTTGCTTTTCAGATGATTACCAACATCATGGGCCCGACACCTAATTCCTGCCCTCGATGCTGATGCCGACTCGAATATACTTTGCTCTGTTCTTCCAAAATTCCCTTTTCTTTTCTCCAACTCTTATCTTGATCCCCCTTTCTTTCTCTTTTCTCTCTATCTAATCTCCTCTCTCACCGCCGTTCTTCCTCTATTTCTTTCTGTTCAGTTATGGATTTCTTTCTTGAACTTGCGCTAACTATTAGTCTTCCTCTTCTTATTTCATTTGTTGTTAGTAAGTTTCTTTCATCCAGGGGGCCTACTGATCAAGAATTGGCTCCGTTTGGTTTTGACTTCGGATTTGGATCGCGAATTCGTAATCTGGAGATTGGTAAACCTAGCGTTGTCGTTGAAGATTTTGTCGGTGAGGATGAGATTGTAGAATGTGAACCGAAACAGGGGAATTTCACCGGAGTACTTGAATCTACAGATGGAACTGAGAGGGAATGTGATGATGAGGTGATTGAGTCTGTGGGGATTTTGGAAGAAAGAGTAGAGAGTAACTTTGATAATACTGGTGGTGATTGCGGAGGAGAAGGTGCAGAGAAGTTAATCGATGAAAGTTCTGTTAGGATGAGGTGTGAGGAAACTGGAATCAATCGGGATGAGGAAGAAGACGTACGCGAGGGCAATGAAGTTGAGGCGTTTGAGAGTGATCGGAGCAAGGAATCCGGTAGAGTAAGCGAGGGACGATCGGTGGAGGAGATTGCCGTCGAGGATGACGATTGGGAGGGAGTTGAAAGAACTGAACTGGAGAAACTATTTGAAGATGCAGTAGGGATTGTGAATTATCGTGAATTCGAAGATCCCAAATTTAGCGGTGAATTGAAGATGCGGCTGAACGGGCTTTACAAGATTGCTATGGAGGGGCCTTGCAGAGAACCGCCGCCAATGGCTTTGAAGATCTCTGCTCGAGCCAAATGGTAAAATCAACTCCTCTTTTGTCTCTCGTTTTCATTTCTCTTCGATTCAATGTTTCTTCTGCTGTCATGATCTTCCTGCAACTCAAATGCTGTTGTTTTCTTGGAATTCGGGAAAATAAGATTTTGAATCCACAAAACTGCTCAAAGTTCTGGAAATTCTATATATTATAACGCACATTGCAACTCTATGATTCTCTTTTGTCTAATAGTTATGAATAAGTAGCTAATAGGTAGAATACAAATCTTTCAAAATAATTGTCAAGTTTGAAGATTTTGACATTTTATGCTATAATTACAAATAATTTTTATTTGCATACAGTTGATTATAAGGAAAAATAAATGGTGGGTTCCAAATATGGTTACTATGTTATATTTGATGCTCATGAATTTGGATGAACTGTATCATTGACTTCATTGTTGTTGAGTTCTTGGTTTCAAAACCTGAAAGTTCGTGAATAGAATGATGATTGAGAGATTGAGATGAAAATGTACGGGTCAAGTTTCATGAATTGAGTACTGTCCTCGTTAGATGTGCATTGCTTTTAATGACTAATGACATAACTAAATCAGGATTTGGTCTAATCTTAACTGATTTAAGAACAAATTGATGAGTCCTGATTTAATGAATGGTTTCTATTTGTTGTACTTGACATCTTAGGCTATTGTTAGCTTTGCTAAATTGGATGCAATCTTTTTAAGGAATGCCTGGAAGCAGCTGGGGAACATGACCCCTGAGATGGCTATGGAAAGCTATTTACACCTTGTTGCTGAGAACATTCCTGGTTGGACGTCCGAAATTACTTCGGTAAGTATTTAGTTTCAATGCGAGCTCACCATTTAGCCCCAAATGATTATCAAACGGAATGTTACTGATTGCACCTCAAACTTGGTTTCTTTTACTCTTCTGATTGCAGGAAAGTAGTGATCAAAATGCTTCTCATTCTTGCAAGTCTGAAAAACTAGCTTCAGAAACGAAACCACTTTAACGAACCGGGGAAAGAACTTCAACCGTGTTACATCGAATATCAATTGGTTTTCGTTTGTATATCAATTGGTTTTCGTTTGTATATCAATTGGTTTTCGTTTGTATATCGATTTTCTACTGGAACTGCAACTGCAGGAAATCTGAATAACTAAAGCCTTGTTTCAACTGCAGGGGATGAAAGTCAGTGATGAGGAAGGTCTATGGAGTCAAAATTCAGTTTGTAAAGTCGTTCTAAGCTTTGGTTCTTTATTGGCCATTTAGCCATTTTCCTATGGTTTGCATTTTAGAGAACCTGGCTATAACATTGTTTATTTTTATCCATGACAATCCGGGGTTCTTGTAAATAGCAATTTGAAGTTGTTTTTCCAAGGTATGAAGCTGTAAATTCAAAAATAATTCCTCTGCCTCTGTAAGTTTGGATTGATTTCTGAAAATAAATTAAATCATTTGATTTTGTTTT TCAAACACACAGCGCCCTAATCCGATCGTGATCATCGTTCCCAGTTGGTGTAAGGGTTCCATTCCAACACCTTGCTTTTCAGATGATTACCAACATCATGGGCCCGACACCTAATTCCTGCCCTCGATGCTGATGCCGACTCGAATATACTTTGCTCTGTTCTTCCAAAAttcccttttcttttctccaactcttatcttgatccccctttctttctcttttctctctatctaatctcctctctcaccgccgttcttcctctatttctttctGTTCAGTTATGGATTTCTTTCTTGAACTTGCGCTAACTATTAGTCTTCCTCTTCTTATTTCATTTGTTGTTAGTAAGTTTCTTTCATCCAGGGGGCCTACTGATCAAGAATTGGCTCCGTTTGGTTTTGACTTCGGATTTGGATCGCGAATTCGTAATCTGGAGATTGGTAAACCTAGCGTTGTCGTTGAAGATTTTGTCGGTGAGGATGAGATTGTAGAATGTGAACCGAAACAGGGGAATTTCACCGGAGTACTTGAATCTACAGATGGAACTGAGAGGGAATGTGATGATGAGGTGATTGAGTCTGTGGGGATTTTGGAAGAAAGAGTAGAGAGTAACTTTGATAATACTGGTGGTGATTGCGGAGGAGAAGGTGCAGAGAAGTTAATCGATGAAAGTTCTGTTAGGATGAGGTGTGAGGAAACTGGAATCAATCGGGATGAGGAAGAAGACGTACGCGAGGGCAATGAAGTTGAGGCGTTTGAGAGTGATCGGAGCAAGGAATCCGGTAGAGTAAGCGAGGGACGATCGGTGGAGGAGATTGCCGTCGAGGATGACGATTGGGAGGGAGTTGAAAGAACTGAACTGGAGAAACTATTTGAAGATGCAGTAGGGATTGTGAATTATCGTGAATTCGAAGATCCCAAATTTAGCGGTGAATTGAAGATGCGGCTGAACGGGCTTTACAAGATTGCTATGGAGGGGCCTTGCAGAGAACCGCCGCCAATGGCTTTGAAGATCTCTGCTCGAGCCAAATGGCTATTGTTAGCTTTGCTAAATTGGATGCAATCTTTTTAAGGAATGCCTGGAAGCAGCTGGGGAACATGACCCCTGAGATGGCTATGGAAAGCTATTTACACCTTGTTGCTGAGAACATTCCTGGTTGGACGTCCGAAATTACTTCGGAAAGTAGTGATCAAAATGCTTCTCATTCTTGCAAGTCTGAAAAACTAGCTTCAGAAACGAAACCACTTTAACGAACCGGGGAAAGAACTTCAACCGTGTTACATCGAATATCAATTGGTTTTCGTTTGTATATCAATTGGTTTTCGTTTGTATATCAATTGGTTTTCGTTTGTATATCGATTTTCTACTGGAACTGCAACTGCAGGAAATCTGAATAACTAAAGCCTTGTTTCAACTGCAGGGGATGAAAGTCAGTGATGAGGAAGGTCTATGGAGTCAAAATTCAGTTTGTAAAGTCGTTCTAAGCTTTGGTTCTTTATTGGCCATTTAGCCATTTTCCTATGGTTTGCATTTTAGAGAACCTGGCTATAACATTGTTTATTTTTATCCATGACAATCCGGGGTTCTTGTAAATAGCAATTTGAAGTTGTTTTTCCAAGGTATGAAGCTGTAAATTCAAAAATAATTCCTCTGCCTCTGTAAGTTTGGATTGATTTCTGAAAATAAATTAAATCATTTGATTTTGTTTT ATGGATTTCTTTCTTGAACTTGCGCTAACTATTAGTCTTCCTCTTCTTATTTCATTTGTTGTTAGTAAGTTTCTTTCATCCAGGGGGCCTACTGATCAAGAATTGGCTCCGTTTGGTTTTGACTTCGGATTTGGATCGCGAATTCGTAATCTGGAGATTGGTAAACCTAGCGTTGTCGTTGAAGATTTTGTCGGTGAGGATGAGATTGTAGAATGTGAACCGAAACAGGGGAATTTCACCGGAGTACTTGAATCTACAGATGGAACTGAGAGGGAATGTGATGATGAGGTGATTGAGTCTGTGGGGATTTTGGAAGAAAGAGTAGAGAGTAACTTTGATAATACTGGTGGTGATTGCGGAGGAGAAGGTGCAGAGAAGTTAATCGATGAAAGTTCTGTTAGGATGAGGTGTGAGGAAACTGGAATCAATCGGGATGAGGAAGAAGACGTACGCGAGGGCAATGAAGTTGAGGCGTTTGAGAGTGATCGGAGCAAGGAATCCGGTAGAGTAAGCGAGGGACGATCGGTGGAGGAGATTGCCGTCGAGGATGACGATTGGGAGGGAGTTGAAAGAACTGAACTGGAGAAACTATTTGAAGATGCAGTAGGGATTGTGAATTATCGTGAATTCGAAGATCCCAAATTTAGCGGTGAATTGAAGATGCGGCTGAACGGGCTTTACAAGATTGCTATGGAGGGGCCTTGCAGAGAACCGCCGCCAATGGCTTTGAAGATCTCTGCTCGAGCCAAATGGCTATTGTTAGCTTTGCTAAATTGGATGCAATCTTTTTAA MDFFLELALTISLPLLISFVVSKFLSSRGPTDQELAPFGFDFGFGSRIRNLEIGKPSVVVEDFVGEDEIVECEPKQGNFTGVLESTDGTERECDDEVIESVGILEERVESNFDNTGGDCGGEGAEKLIDESSVRMRCEETGINRDEEEDVREGNEVEAFESDRSKESGRVSEGRSVEEIAVEDDDWEGVERTELEKLFEDAVGIVNYREFEDPKFSGELKMRLNGLYKIAMEGPCREPPPMALKISARAKWLLLALLNWMQSF*
BLAST of Cucsa.102980 vs. Swiss-Prot
Match: ACBP3_ARATH (Acyl-CoA-binding domain-containing protein 3 OS=Arabidopsis thaliana GN=ACBP3 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 6.3e-27 Identity = 68/134 (50.75%), Postives = 86/134 (64.18%), Query Frame = 1
BLAST of Cucsa.102980 vs. Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2) HSP 1 Score: 112.5 bits (280), Expect = 8.5e-24 Identity = 60/142 (42.25%), Postives = 81/142 (57.04%), Query Frame = 1
BLAST of Cucsa.102980 vs. Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-22 Identity = 64/173 (36.99%), Postives = 90/173 (52.02%), Query Frame = 1
BLAST of Cucsa.102980 vs. Swiss-Prot
Match: ECI2_HUMAN (Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2 PE=1 SV=4) HSP 1 Score: 62.8 bits (151), Expect = 7.8e-09 Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 1
BLAST of Cucsa.102980 vs. Swiss-Prot
Match: ECI2_MOUSE (Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2 PE=1 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-08 Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 1
BLAST of Cucsa.102980 vs. TrEMBL
Match: A0A0A0KFX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G494950 PE=4 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 4.8e-175 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1
BLAST of Cucsa.102980 vs. TrEMBL
Match: A0A061DGU6_THECC (Acyl-CoA-binding-like protein isoform 1 OS=Theobroma cacao GN=TCM_000755 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36 Identity = 111/319 (34.80%), Postives = 161/319 (50.47%), Query Frame = 1
BLAST of Cucsa.102980 vs. TrEMBL
Match: A0A061DGY9_THECC (Acyl-CoA-binding-like protein isoform 2 OS=Theobroma cacao GN=TCM_000755 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36 Identity = 111/319 (34.80%), Postives = 161/319 (50.47%), Query Frame = 1
BLAST of Cucsa.102980 vs. TrEMBL
Match: A0A061DIE5_THECC (F22C12.10, putative isoform 3 OS=Theobroma cacao GN=TCM_000755 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36 Identity = 111/319 (34.80%), Postives = 161/319 (50.47%), Query Frame = 1
BLAST of Cucsa.102980 vs. TrEMBL
Match: M5VZU2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007836mg PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33 Identity = 104/271 (38.38%), Postives = 148/271 (54.61%), Query Frame = 1
BLAST of Cucsa.102980 vs. TAIR10
Match: AT4G24230.6 (AT4G24230.6 acyl-CoA-binding domain 3) HSP 1 Score: 122.9 bits (307), Expect = 3.6e-28 Identity = 68/134 (50.75%), Postives = 86/134 (64.18%), Query Frame = 1
BLAST of Cucsa.102980 vs. TAIR10
Match: AT5G53470.1 (AT5G53470.1 acyl-CoA binding protein 1) HSP 1 Score: 112.5 bits (280), Expect = 4.8e-25 Identity = 60/142 (42.25%), Postives = 81/142 (57.04%), Query Frame = 1
BLAST of Cucsa.102980 vs. TAIR10
Match: AT4G27780.1 (AT4G27780.1 acyl-CoA binding protein 2) HSP 1 Score: 108.2 bits (269), Expect = 9.1e-24 Identity = 64/173 (36.99%), Postives = 90/173 (52.02%), Query Frame = 1
BLAST of Cucsa.102980 vs. TAIR10
Match: AT3G05420.2 (AT3G05420.2 acyl-CoA binding protein 4) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 1
BLAST of Cucsa.102980 vs. NCBI nr
Match: gi|449448258|ref|XP_004141883.1| (PREDICTED: acyl-CoA-binding domain-containing protein 3 [Cucumis sativus]) HSP 1 Score: 621.7 bits (1602), Expect = 6.9e-175 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1
BLAST of Cucsa.102980 vs. NCBI nr
Match: gi|659079623|ref|XP_008440355.1| (PREDICTED: acyl-CoA-binding domain-containing protein 3 [Cucumis melo]) HSP 1 Score: 521.2 bits (1341), Expect = 1.3e-144 Identity = 263/308 (85.39%), Postives = 279/308 (90.58%), Query Frame = 1
BLAST of Cucsa.102980 vs. NCBI nr
Match: gi|590705563|ref|XP_007047473.1| (Acyl-CoA-binding-like protein isoform 2 [Theobroma cacao]) HSP 1 Score: 159.8 bits (403), Expect = 7.4e-36 Identity = 111/319 (34.80%), Postives = 161/319 (50.47%), Query Frame = 1
BLAST of Cucsa.102980 vs. NCBI nr
Match: gi|590705567|ref|XP_007047474.1| (F22C12.10, putative isoform 3 [Theobroma cacao]) HSP 1 Score: 159.8 bits (403), Expect = 7.4e-36 Identity = 111/319 (34.80%), Postives = 161/319 (50.47%), Query Frame = 1
BLAST of Cucsa.102980 vs. NCBI nr
Match: gi|590705559|ref|XP_007047472.1| (Acyl-CoA-binding-like protein isoform 1 [Theobroma cacao]) HSP 1 Score: 159.8 bits (403), Expect = 7.4e-36 Identity = 111/319 (34.80%), Postives = 161/319 (50.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |