Cucsa.102370 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGGGGAGAAAGTGTACCAAATGAATGATGGCTTGCTTGGATACGTACAAGAACAAGTCAGATCAGAAGGGACAGTTCCCTCCGATGAGCCCAAGACTGTCCTTTTCCAACGACTTCGTCGAATCATCCAATAATCCCTCCCCCACCAGCACCACCAATAATATTCAGGATCCGAAAATCCTTCCAAACATTCCCCCCTCCGACGACTTCGAATTCTCGCCAAATCCCACTAATCACACCGCCATGACCGCCGCCGACCAGCTCTTCTTCAAGGGAAAATTGTTGCCCACTCTCAGAGACGAGCTTCTCATTGACGACGACGACGAAGACTTTGCTCCAGTGCCCCCGAAAGGTGGGCTACCAAAATGGAAGGAGTTTCTGAGCCTGAAGAGATCCGTTGTTGATGGGCGCTGCACGGCCACCGACAACAACAAAAACAACGATGCCAACCAAAGCAAAATCCCCAAATTGGCCCTCTACGATAACTCCTCATCCCATCTTCCCATAACTTCCTAGTTCCTATATCAGATCCACTGC TGTGGGGAGAAAGTGTACCAAATGAATGATGGCTTGCTTGGATACGTACAAGAACAAGTCAGATCAGAAGGGACAGTTCCCTCCGATGAGCCCAAGACTGTCCTTTTCCAACGACTTCGTCGAATCATCCAATAATCCCTCCCCCACCAGCACCACCAATAATATTCAGGATCCGAAAATCCTTCCAAACATTCCCCCCTCCGACGACTTCGAATTCTCGCCAAATCCCACTAATCACACCGCCATGACCGCCGCCGACCAGCTCTTCTTCAAGGGAAAATTGTTGCCCACTCTCAGAGACGAGCTTCTCATTGACGACGACGACGAAGACTTTGCTCCAGTGCCCCCGAAAGGTGGGCTACCAAAATGGAAGGAGTTTCTGAGCCTGAAGAGATCCGTTGTTGATGGGCGCTGCACGGCCACCGACAACAACAAAAACAACGATGCCAACCAAAGCAAAATCCCCAAATTGGCCCTCTACGATAACTCCTCATCCCATCTTCCCATAACTTCCTAGTTCCTATATCAGATCCACTGC ATGATGGCTTGCTTGGATACGTACAAGAACAAGTCAGATCAGAAGGGACAGTTCCCTCCGATGAGCCCAAGACTGTCCTTTTCCAACGACTTCGTCGAATCATCCAATAATCCCTCCCCCACCAGCACCACCAATAATATTCAGGATCCGAAAATCCTTCCAAACATTCCCCCCTCCGACGACTTCGAATTCTCGCCAAATCCCACTAATCACACCGCCATGACCGCCGCCGACCAGCTCTTCTTCAAGGGAAAATTGTTGCCCACTCTCAGAGACGAGCTTCTCATTGACGACGACGACGAAGACTTTGCTCCAGTGCCCCCGAAAGGTGGGCTACCAAAATGGAAGGAGTTTCTGAGCCTGAAGAGATCCGTTGTTGATGGGCGCTGCACGGCCACCGACAACAACAAAAACAACGATGCCAACCAAAGCAAAATCCCCAAATTGGCCCTCTACGATAACTCCTCATCCCATCTTCCCATAACTTCCTAG MMACLDTYKNKSDQKGQFPPMSPRLSFSNDFVESSNNPSPTSTTNNIQDPKILPNIPPSDDFEFSPNPTNHTAMTAADQLFFKGKLLPTLRDELLIDDDDEDFAPVPPKGGLPKWKEFLSLKRSVVDGRCTATDNNKNNDANQSKIPKLALYDNSSSHLPITS*
BLAST of Cucsa.102370 vs. TrEMBL
Match: A0A0A0KIB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490830 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 1.5e-90 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Cucsa.102370 vs. TrEMBL
Match: B9HHH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11160g PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.5e-18 Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 1
BLAST of Cucsa.102370 vs. TrEMBL
Match: K4B6T7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.4e-18 Identity = 70/157 (44.59%), Postives = 91/157 (57.96%), Query Frame = 1
BLAST of Cucsa.102370 vs. TrEMBL
Match: A0A061DN29_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000598 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.8e-18 Identity = 61/139 (43.88%), Postives = 80/139 (57.55%), Query Frame = 1
BLAST of Cucsa.102370 vs. TrEMBL
Match: A0A0D2T270_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G074900 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.9e-17 Identity = 61/160 (38.12%), Postives = 85/160 (53.12%), Query Frame = 1
BLAST of Cucsa.102370 vs. TAIR10
Match: AT5G66800.1 (AT5G66800.1 unknown protein) HSP 1 Score: 75.1 bits (183), Expect = 4.5e-14 Identity = 61/155 (39.35%), Postives = 80/155 (51.61%), Query Frame = 1
BLAST of Cucsa.102370 vs. TAIR10
Match: AT3G50640.1 (AT3G50640.1 unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06 Identity = 46/137 (33.58%), Postives = 63/137 (45.99%), Query Frame = 1
BLAST of Cucsa.102370 vs. NCBI nr
Match: gi|700193315|gb|KGN48519.1| (hypothetical protein Csa_6G490830 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 2.1e-90 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Cucsa.102370 vs. NCBI nr
Match: gi|778722414|ref|XP_011658481.1| (PREDICTED: uncharacterized protein LOC105436025 [Cucumis sativus]) HSP 1 Score: 338.2 bits (866), Expect = 8.1e-90 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1
BLAST of Cucsa.102370 vs. NCBI nr
Match: gi|659081022|ref|XP_008441107.1| (PREDICTED: uncharacterized protein LOC103485334 [Cucumis melo]) HSP 1 Score: 312.8 bits (800), Expect = 3.6e-82 Identity = 153/162 (94.44%), Postives = 154/162 (95.06%), Query Frame = 1
BLAST of Cucsa.102370 vs. NCBI nr
Match: gi|743931818|ref|XP_011010192.1| (PREDICTED: uncharacterized protein LOC105115099 [Populus euphratica]) HSP 1 Score: 102.1 bits (253), Expect = 9.7e-19 Identity = 65/140 (46.43%), Postives = 83/140 (59.29%), Query Frame = 1
BLAST of Cucsa.102370 vs. NCBI nr
Match: gi|698557822|ref|XP_009771132.1| (PREDICTED: uncharacterized protein LOC104221708 [Nicotiana sylvestris]) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18 Identity = 68/160 (42.50%), Postives = 93/160 (58.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |