Cucsa.102310 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGAGGTGAAGGGGAAAGAAGGAGATACAATGGGGGAGGAGAGAGTTTTATTGAAGAAAAGTTGAAAACTCTAAGAACTCTGTGAACTCCCAATCCCAATCCCAATCCCAATCCCAATCCCAATCCCAATCCCACCAAACCTAACCAAACCAAACAATGCCTCTTCAAATTGAGGCAAACCCAATGAATCCAGACAGCGATACTCAAGATCTTCTATTCTTTTCACTCATCTTTCCTACAAACATTTTCATTCTTTAATTTCATTCTTCATTCCATACATACACACATACTTATATATCTTTCTTAATTATTTCTCTTCTTCTCATCCATTTTCTTCACCAAATACATAAGGAATTTGGTTTTCTTGGTGGGTTTCTTCTCTAATTTATATTACTTGTCTCTTCTTCGGTTCTGTTCCACCTTCGCTTTGTTTTGTTTTGTACTCGCTATACGGAAGGATGCGCAACATGGGGAGTTCACCCTCTACCCGAGGAATCGCCGCCATTGTTGGTGTTGGCCCCAAGCTTGGCCGTTCTATCGCTCGCAAGTTCGCCCACGAAGGCTATACCGTCGCTATTCTCGCCAGAGACTTGGGTATTTATTTATTGTACTAACTGTGTAAATTTACGATGTTGAAAATTGGGGATTGGAATTCGTGTCTATTTTTTTGTAATTTCGTTTTCAGGTAGACTATCAAGATTTGCGGATGAGATAGCGAGAGAAGAGAAGTCTCAAGTGTTTGCGATTCGAATAGATTGCTCGGACTCGAGAAGTGTGAGGGAAGCCTTTGAAGGTGTGTTGTCACTGGGATTTGTAGAGGTTTTGATTTACAATGCAAATCAACAAGTTTCAAGACAACCCACAAGATTCACCGATGTTCGTATTGACTCATTTGAGAGATCTCTCGCTGTTTCTTCTGTGGGTGCTTTCCATTGTTCTCAACAGGTACACACGTAACTCTCAGCCGCCGTCAGCCCCTCTTTCCCCCATTTCCATTTCCTTCATTTTCCCAGAAGAATCAAACAAAAATGGGGTTTAGAACTTTGTGTAAAAACAAATTTCAATTTGTTGTAAAATTGTATAGGTTATTCCAGGGATGGTGGAAAGAGGAAGAGGTACGATTCTTTTTACAGGCTGCTCAGCTTCTCTTAATGGCGTTGCTGGTTTCTCTGACCTTTGTAAGTTCTGCAAGTTTTCTGTTTAGATTTACTATCTTTTTTAGTTGTACACAGGACAGAATCTGATTGAGGTGTTATTAAAAAAGTTGAGAGAGGGTATTTTGTAATCAATCAATTTACAAAACCCTGTTCTTAAAATTTTGTTTTGGTTTTGGGATATAGGCTGTGGAAAATTTGCATTAAGAGCATTATCTCAGTGTTTAGCTAGAGAGCTCCAACCCGTTGGAATACACGTCGCTCATATTATTATCGATGGTCTCATTGGCCCACCGAGGTTTAATTTCTTCTTCCTCAACTCTCAACTCGAATGTGATGCTCCAATATTTCCCCCCCTTATTTTCAGGCCATCCAAACAGAATTTCCCAGATTCTCTAAAAACAAAAGGAATTGGTATGATAACGAAACAAATTATGCGTGTTTTATTGCAGGACAAGTTCAATAACATCTCACAGAGGAGGATCATCTTCATCATCGTCATCATCTTCGTCATCATCAGTTGGATCGCATTTACAAAGTGGAATTGGAGATCAAGGGACAATGGACCCAGATGCGTTGGCTCAAACTTATTGGCACTTGCATGTTCAGGACCGGACTGCTTGGACCCAAGAAATTGATCTACGGCCTTCAAATCCCAGATTGTTCTAGCTATTTACACTTGAAAAGAGAGAAGAAGAAGAAAACAGCATCATGATTAAAAAAGGAGAAGTGGCTATTTGTTGTGTGGTTGAAGTGACCCAAGGGGAGACCCACATTTCATTTTCCTTTTTAATATTCTGTCACAAAAACCTCAAGGGCTCACACCCAATCATTTTGCTTCACGGATGTGTCTTTCTGAATCTCCCAC TGGAGAGGTGAAGGGGAAAGAAGGAGATACAATGGGGGAGGAGAGAGTTTTATTGAAGAAAAGTTGAAAACTCTAAGAACTCTGTGAACTcccaatcccaatcccaatcccaatcccaatcccaatcccaatcccaccaaacctaaccaaaccaaacaatgcctcttcaaattgaggcaaacccaatgaatccagacAGCGATACTCAAGATCTTCTATTCTTTTCACTCATCTTTCCTACAAACATTTTCATTCTTTAATTTCATTCTTCATTCCATACATACACACATACTTATATATCTTTCTTAATTATTTCTCTTCTTCTCATCCATTTTCTTCACCAAATACATAAGGAATTTGGTTTTCTTGGTGGGTTTCTTCTCTAATTTATATTACTTGTCTCTTCTTCGGTTCTGTTCCACCTTCGCTTTGTTTTGTTTTGTACTCGCTATACGGAAGGATGCGCAACATGGGGAGTTCACCCTCTACCCGAGGAATCGCCGCCATTGTTGGTGTTGGCCCCAAGCTTGGCCGTTCTATCGCTCGCAAGTTCGCCCACGAAGGCTATACCGTCGCTATTCTCGCCAGAGACTTGGGTAGACTATCAAGATTTGCGGATGAGATAGCGAGAGAAGAGAAGTCTCAAGTGTTTGCGATTCGAATAGATTGCTCGGACTCGAGAAGTGTGAGGGAAGCCTTTGAAGGTGTGTTGTCACTGGGATTTGTAGAGGTTTTGATTTACAATGCAAATCAACAAGTTTCAAGACAACCCACAAGATTCACCGATGTTCGTATTGACTCATTTGAGAGATCTCTCGCTGTTTCTTCTGTGGGTGCTTTCCATTGTTCTCAACAGGTTATTCCAGGGATGGTGGAAAGAGGAAGAGGTACGATTCTTTTTACAGGCTGCTCAGCTTCTCTTAATGGCGTTGCTGGTTTCTCTGACCTTTGTAAGTTCTGCAAGTTTTCTGTTTAGATTTACTATCTTTTTTAGTTGTACACAGGACAGAATCTGATTGAGGTGTTATTAAAAAAGTTGAGAGAGGGTATTTTGTAATCAATCAATTTACAAAACCCTGTTCTTAAAATTTTGTTTTGGTTTTGGGATATAGGCTGTGGAAAATTTGCATTAAGAGCATTATCTCAGTGTTTAGCTAGAGAGCTCCAACCCGTTGGAATACACGTCGCTCATATTATTATCGATGGTCTCATTGGCCCACCGAGGTTTAATTTCTTCTTCCTCAACTCTCAACTCGAATGTGATGCTCCAATATTTCCCCCCCTTATTTTCAGGCCATCCAAACAGAATTTCCCAGATTCTCTAAAAACAAAAGGAATTGGTATGATAACGAAACAAATTATGCGTGTTTTATTGCAGGACAAGTTCAATAACATCTCACAGAGGAGGatcatcttcatcatcgtcatcatcttcgtcatcatcaGTTGGATCGCATTTACAAAGTGGAATTGGAGATCAAGGGACAATGGACCCAGATGCGTTGGCTCAAACTTATTGGCACTTGCATGTTCAGGACCGGACTGCTTGGACCCAAGAAATTGATCTACGGCCTTCAAATCCCAGATTGTTCTAGCTATTTACACTTGAAAAGAGAGAAGAAGAAGAAAACAGCATCATGATTAAAAAAGGAGAAGTGGCTATTTGTTGTGTGGTTGAAGTGACCCAAGGGGAGACCCACATTTCATTTTCCTTTTTAATATTCTGTCACAAAAACCTCAAGGGCTCACACCCAATCATTTTGCTTCACGGATGTGTCTTTCTGAATCTCCCAC ATGCGCAACATGGGGAGTTCACCCTCTACCCGAGGAATCGCCGCCATTGTTGGTGTTGGCCCCAAGCTTGGCCGTTCTATCGCTCGCAAGTTCGCCCACGAAGGCTATACCGTCGCTATTCTCGCCAGAGACTTGGGTAGACTATCAAGATTTGCGGATGAGATAGCGAGAGAAGAGAAGTCTCAAGTGTTTGCGATTCGAATAGATTGCTCGGACTCGAGAAGTGTGAGGGAAGCCTTTGAAGGTGTGTTGTCACTGGGATTTGTAGAGGTTTTGATTTACAATGCAAATCAACAAGTTTCAAGACAACCCACAAGATTCACCGATGTTCGTATTGACTCATTTGAGAGATCTCTCGCTGTTTCTTCTGTGGGTGCTTTCCATTGTTCTCAACAGGTTATTCCAGGGATGGTGGAAAGAGGAAGAGGTACGATTCTTTTTACAGGCTGCTCAGCTTCTCTTAATGGCGTTGCTGGTTTCTCTGACCTTTGTAAGTTCTGCAAGTTTTCTGTTTAG MRNMGSSPSTRGIAAIVGVGPKLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLIYNANQQVSRQPTRFTDVRIDSFERSLAVSSVGAFHCSQQVIPGMVERGRGTILFTGCSASLNGVAGFSDLCKFCKFSV*
BLAST of Cucsa.102310 vs. Swiss-Prot
Match: KDSR_BOVIN (3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12 Identity = 51/181 (28.18%), Postives = 95/181 (52.49%), Query Frame = 1
BLAST of Cucsa.102310 vs. Swiss-Prot
Match: KDSR_MOUSE (3-ketodihydrosphingosine reductase OS=Mus musculus GN=Kdsr PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.5e-11 Identity = 49/181 (27.07%), Postives = 95/181 (52.49%), Query Frame = 1
BLAST of Cucsa.102310 vs. Swiss-Prot
Match: SRLD_ECOLI (Sorbitol-6-phosphate 2-dehydrogenase OS=Escherichia coli (strain K12) GN=srlD PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 7.3e-11 Identity = 55/196 (28.06%), Postives = 92/196 (46.94%), Query Frame = 1
BLAST of Cucsa.102310 vs. Swiss-Prot
Match: KDSR_DICDI (3-ketodihydrosphingosine reductase OS=Dictyostelium discoideum GN=ksrA-1 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.8e-10 Identity = 59/244 (24.18%), Postives = 112/244 (45.90%), Query Frame = 1
BLAST of Cucsa.102310 vs. Swiss-Prot
Match: MKAR_ASPCL (Very-long-chain 3-oxoacyl-CoA reductase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_070510 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.2e-10 Identity = 61/230 (26.52%), Postives = 98/230 (42.61%), Query Frame = 1
BLAST of Cucsa.102310 vs. TrEMBL
Match: A0A0A0KFR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490250 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 1.1e-149 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1
BLAST of Cucsa.102310 vs. TrEMBL
Match: A0A061DHS1_THECC (NAD(P)-binding Rossmann-fold superfamily protein OS=Theobroma cacao GN=TCM_000573 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 1.4e-114 Identity = 215/275 (78.18%), Postives = 235/275 (85.45%), Query Frame = 1
BLAST of Cucsa.102310 vs. TrEMBL
Match: A0A0S3R4P4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G344100 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-111 Identity = 207/274 (75.55%), Postives = 231/274 (84.31%), Query Frame = 1
BLAST of Cucsa.102310 vs. TrEMBL
Match: A0A022RZG2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011828mg PE=4 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-111 Identity = 205/271 (75.65%), Postives = 232/271 (85.61%), Query Frame = 1
BLAST of Cucsa.102310 vs. TrEMBL
Match: A0A0B2QY32_GLYSO (3-ketodihydrosphingosine reductase OS=Glycine soja GN=glysoja_035795 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 5.6e-111 Identity = 206/272 (75.74%), Postives = 234/272 (86.03%), Query Frame = 1
BLAST of Cucsa.102310 vs. TAIR10
Match: AT3G50560.1 (AT3G50560.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 367.9 bits (943), Expect = 5.6e-102 Identity = 187/272 (68.75%), Postives = 218/272 (80.15%), Query Frame = 1
BLAST of Cucsa.102310 vs. NCBI nr
Match: gi|449448338|ref|XP_004141923.1| (PREDICTED: 3-ketodihydrosphingosine reductase [Cucumis sativus]) HSP 1 Score: 537.3 bits (1383), Expect = 1.5e-149 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1
BLAST of Cucsa.102310 vs. NCBI nr
Match: gi|659079433|ref|XP_008440254.1| (PREDICTED: estradiol 17-beta-dehydrogenase 12 [Cucumis melo]) HSP 1 Score: 526.6 bits (1355), Expect = 2.7e-146 Identity = 266/272 (97.79%), Postives = 270/272 (99.26%), Query Frame = 1
BLAST of Cucsa.102310 vs. NCBI nr
Match: gi|590704569|ref|XP_007047194.1| (NAD(P)-binding Rossmann-fold superfamily protein [Theobroma cacao]) HSP 1 Score: 420.6 bits (1080), Expect = 2.1e-114 Identity = 215/275 (78.18%), Postives = 235/275 (85.45%), Query Frame = 1
BLAST of Cucsa.102310 vs. NCBI nr
Match: gi|747102077|ref|XP_011099188.1| (PREDICTED: 3-ketodihydrosphingosine reductase isoform X1 [Sesamum indicum]) HSP 1 Score: 417.5 bits (1072), Expect = 1.7e-113 Identity = 209/271 (77.12%), Postives = 235/271 (86.72%), Query Frame = 1
BLAST of Cucsa.102310 vs. NCBI nr
Match: gi|950996730|ref|XP_014505826.1| (PREDICTED: 3-ketodihydrosphingosine reductase-like [Vigna radiata var. radiata]) HSP 1 Score: 411.0 bits (1055), Expect = 1.6e-111 Identity = 207/274 (75.55%), Postives = 231/274 (84.31%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |