Cucsa.100750 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.100750
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Descriptionactin related protein 2
Locationscaffold00927 : 41555 .. 43205 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTAGATTCAGAGCTGTTAGGAACCTTCCTGCTGAATTTCTTCATCAGTTGCCAATGAGCTACTTGAAGGTATATGGAGTTTTAAGAATATGCTACTTGAATGCACCCAATAGTTGTTATAGCTTATTAGTTGAGTTATATCTTATAAGTTGAGTATTGATATATGAGAAGAAAAGTTGGAAATGATTAAAGTTCTTCGGTTCCTATATATTTCAAGTTGCCTTTTGCAAAAGTTTTTCCTTGCAGAATACCATATTATTTGCCCCTAGCCAAGTATTGAGATAGTTATAAGGCAAAAACATTTTTTTTTCTCTGTTACAAGTAACCATTTGCACTAATGACTGGAAATGTGTATTGTTCATTGAATATTGCATCTTCATTTCCACATTTTCTTGTTTCTAATGGCCATTTGTTATGGTTATATCTTTGTATCATGTGGACGCTTGCTACTGAGTATGGTTTTCGAAACTTGTATTACTCTCAACTATTATTGTTGGTGCTCATACTTCAAGTGTGATCTCATTAGTCATCATTTAGATTGGTTAGTTATATAGGCATTTTTTCCCTTTTTTTGTTGTGCTAAAAAAATGTATACTCCACTATACTTAAATTCCCATTTGCCACCTACTTTGAGTTTTATACATTTTTTCCATGGACAAATCATAATGTTGTGCTAAAAGAACCATGAAAAAATGGTTTGTAAAATTTTGCTCACAGACCCACCTTTCAATCCTTCAAAGAACCGTGAAAAAATGGTTTGTGATATTTGATTTTCTTTCAATGTTATTTCAATTTCATTTGCTCAATTTAATGAGTTGGGTCAATTTAATCTTATAGGTAGAGACCATGTTTGAGAAGTACAACTTTTACTGGGGTCTTCATTCAAATCCAAGTAGTTTTAACTTTATATTGCTTAAGGTGCTTATAAAAATGAATTGAAAGTCAAAATTGTGCTTAGTTATTTTTCTGAACTTGTCATCTTTCTCAATTTTTTTCTTATAGTTTTCATCTAATTTTTTACTTAATTTTTCTTTTTGTGCTGGCAGGTTTACTGGCTGGATTAGTCATTGACTCTGGTGATGGTGTCACTCATGTGGTAAAAAATTTACATACTTGTCAAGAGGAGATTTAAAGGTATAGTTCTTAAGGGTTTTTTTTTTTTCTCTCTTTTTCATTTTATTTCTTTTTTAGCTTTCTAATCAATCAATGAGTTTTTGTTGATGGGGTTAATTCTCTCCAGCTTTCAGATTATGTCTAGATATTGTGTTTCTAAAAGGTGAGATTGTTGAGCTACTTTTACCCATTGTAGTTTCAATCTAGCTAGAATAAAGGATTTGGATATTGATCTTCAAAACTAATTTCACTTCAGGTTTTTTATTGTTTATTTGTCATTAGATTATGGTGTTCTATTCTTCAATGTTGCTCTGTTTTGTAGGTTTAATCATGCTCTAAGGTCAGTTGCAAATATTATACAAACTTCACATATATGGCTCTGTTTTGTTGTTTAATTTGCTCTTCTTTTATAGACAAGATATCTTCATTTTTTGAACTGGCCTGTCAAATGGGGGTGTCAGGATCTCCAGTCTTTTATATTTGTATTTGAGAGACATAAAAGGTGCATTGTTGGATCTCATCCCACCTCGTGGTTGA

mRNA sequence

ATGTAGATTCAGAGCTGTTAGGAACCTTCCTGCTGAATTTCTTCATCAGTTGCCAATGAGCTACTTGAAGGTATATGgagttttaagaatatgctacttgaatgcacccaatagttttgccttttgcaaaagtttttccttgcagaataccatattatttgcccctagccaaaaccatgaaaaaatggtttgtaaaattttgctcacagacccacctttcaatccttcaaagaaccgtgaaaaaatgagaccatgtttgagaagtacaacttttactggggtcttcattcaaatccaagtagttttaactttatattgcttaagttttcatctaattttttacttaatttttctttttgtgctggcaggtttactggctggattagtcattgactctggtgatggtgtcactcatgtgatatcttcattttttgaactggcctgtcaaatgggggtagacataaaaggtgcattgttggatctcatcccacctcgtggttga

Coding sequence (CDS)

ATGTAGATTCAGAGCTGTTAGGAACCTTCCTGCTGAATTTCTTCATCAGTTGCCAATGAGCTACTTGAAGGTATATGGAGTTTTAAGAATATGCTACTTGAATGCACCCAATAGTTTTGCCTTTTGCAAAAGTTTTTCCTTGCAGAATACCATATTATTTGCCCCTAGCCAAAACCATGAAAAAATGGTTTGTAAAATTTTGCTCACAGACCCACCTTTCAATCCTTCAAAGAACCGTGAAAAAATGAGACCATGTTTGAGAAGTACAACTTTTACTGGGGTCTTCATTCAAATCCAAGTAGTTTTAACTTTATATTGCTTAAGTTTTCATCTAATTTTTTACTTAATTTTTCTTTTTGTGCTGGCAGGTTTACTGGCTGGATTAGTCATTGACTCTGGTGATGGTGTCACTCATGTGATATCTTCATTTTTTGAACTGGCCTGTCAAATGGGGGTAGACATAAAAGGTGCATTGTTGGATCTCATCCCACCTCGTGGTTGA

Protein sequence

CRFRAVRNLPAEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTDPPFNPSKNREKMRPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLVIDSGDGVTHVISSFFELACQMGVDIKGALLDLIPPRG*
Homology
[Close]
BLAST of Cucsa.100750 vs. Swiss-Prot
Match: ARP2_ARATH (Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 58/112 (51.79%), Postives = 62/112 (55.36%), Query Frame = 1 

Query: 64  CKILLTDPPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLA 123
           CKILLTDPP NPSKNREKM         F GVFIQIQ VLTLY                 
Sbjct: 102 CKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYA---------------Q 161

Query: 124 GLLAGLVIDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           GLL GLVIDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 162 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. Swiss-Prot
Match: ARP2_ORYSI (Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=3 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 62/165 (37.58%), Postives = 81/165 (49.09%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           A+  HQL +SY    G+++     + +        +  + +   PS+      CKILLTD
Sbjct: 60  ADLRHQLDVSYPVTNGIVQ-----SWDDMGHIWDHAFYSELKVDPSE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NP KNREKM         F GVFIQ+Q VL+LY                 GLL GLV
Sbjct: 120 PPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      S+  +  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. Swiss-Prot
Match: ARP2_ORYSJ (Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 62/165 (37.58%), Postives = 81/165 (49.09%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           A+  HQL +SY    G+++     + +        +  + +   PS+      CKILLTD
Sbjct: 60  ADLRHQLDVSYPVTNGIVQ-----SWDDMGHIWDHAFYSELKVDPSE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NP KNREKM         F GVFIQ+Q VL+LY                 GLL GLV
Sbjct: 120 PPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      S+  +  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. Swiss-Prot
Match: ARP2B_DANRE (Actin-related protein 2-B OS=Danio rerio GN=actr2b PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.2e-13
Identity = 44/89 (49.44%), Postives = 53/89 (59.55%), Query Frame = 1 

Query: 53  FAPSQ-NHEKMVCKILLTDPPFNPSKNREKMRPCLRST-TFTGVFIQIQVVLTLYCLSFH 112
           F P + N     CKILLT+PP NP+KNREK+   +  T  FTGV+I IQ VLTLY     
Sbjct: 93  FGPEKLNINSRDCKILLTEPPMNPTKNREKIIEVMFETYQFTGVYIAIQAVLTLYA---- 152

Query: 113 LIFYLIFLFVLAGLLAGLVIDSGDGVTHV 140
                       GLL G+V+DSGDGVTH+
Sbjct: 153 -----------QGLLTGVVVDSGDGVTHI 166

[Close]
BLAST of Cucsa.100750 vs. Swiss-Prot
Match: ARP2A_DANRE (Actin-related protein 2-A OS=Danio rerio GN=actr2a PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = 1 

Query: 53  FAPSQ-NHEKMVCKILLTDPPFNPSKNREKMRPCLRST-TFTGVFIQIQVVLTLYCLSFH 112
           F P + N +   CKILLT+PP NP+KNREK+   +  T  F+GV+I IQ VLTLY     
Sbjct: 93  FGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEVMFETYQFSGVYIAIQAVLTLYA---- 152

Query: 113 LIFYLIFLFVLAGLLAGLVIDSGDGVTHV 140
                       GLL G+V+DSGDGVTH+
Sbjct: 153 -----------QGLLTGVVVDSGDGVTHI 166

[Close]
BLAST of Cucsa.100750 vs. TrEMBL
Match: M0U825_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.3e-16
Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AEF HQL +SY    G+++       +        +  + +   PS+      CKILLTD
Sbjct: 60  AEFRHQLDISYPVNNGIVQNW-----DDMGHVWDHAFYSELKIDPSE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPSKNREKM         F+GVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSKNREKMIETMFEKYNFSGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. TrEMBL
Match: W9SL04_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010807 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15
Identity = 69/165 (41.82%), Postives = 82/165 (49.70%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AEF HQL +SY    G+++       +        +  N +   P++      CKILLTD
Sbjct: 60  AEFRHQLDISYPVNNGIVQNW-----DDMGHVWDHAFFNELKIDPTE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPSKNREKM         F GVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSKNREKMVETMFEKYNFAGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. TrEMBL
Match: W1PF76_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00016p00217220 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15
Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AE  HQL +SY    G+++       +   +    +  N +   P++      CKILLTD
Sbjct: 60  AELRHQLDISYPVNNGIVQNW-----DDMGYVWDHAFFNELKIDPTE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPS+NREKM        +FTGVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSRNREKMIETMFEKYSFTGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLLRRG 198

[Close]
BLAST of Cucsa.100750 vs. TrEMBL
Match: A0A0D2PXM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G275200 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-15
Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           A+  HQL +SY    G+++    N  + +      +  N +   PS+      CKILLTD
Sbjct: 60  ADLRHQLDISYPVNNGIVQ----NWDDMYNIW-DHAFYNELKINPSE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPSKNREKM         F GVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSKNREKMVETMFEKYNFAGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGFSFPHLTKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. TrEMBL
Match: A0A0D2QWS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G275200 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-15
Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           A+  HQL +SY    G+++    N  + +      +  N +   PS+      CKILLTD
Sbjct: 60  ADLRHQLDISYPVNNGIVQ----NWDDMYNIW-DHAFYNELKINPSE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPSKNREKM         F GVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSKNREKMVETMFEKYNFAGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGFSFPHLTKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. TAIR10
Match: AT3G27000.1 (AT3G27000.1 actin related protein 2)

HSP 1 Score: 87.4 bits (215), Expect = 8.9e-18
Identity = 58/112 (51.79%), Postives = 62/112 (55.36%), Query Frame = 1 

Query: 64  CKILLTDPPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLA 123
           CKILLTDPP NPSKNREKM         F GVFIQIQ VLTLY                 
Sbjct: 102 CKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYA---------------Q 161

Query: 124 GLLAGLVIDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           GLL GLVIDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 162 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. TAIR10
Match: AT2G37620.1 (AT2G37620.1 actin 1)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1 

Query: 66  ILLTDPPFNPSKNREKMRPCLRST-TFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGL 125
           ILLT+ P NP  NREKM   +  T     +++ IQ VL+LY                +G 
Sbjct: 105 ILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA---------------SGR 164

Query: 126 LAGLVIDSGDGVTHVISSFFELACQ--------MGVDIKGALLDLIPPRG 167
             G+V+DSGDGV+H +  +   A           G D+  AL+ ++  RG
Sbjct: 165 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG 199

[Close]
BLAST of Cucsa.100750 vs. TAIR10
Match: AT3G53750.1 (AT3G53750.1 actin 3)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1 

Query: 66  ILLTDPPFNPSKNREKMRPCLRST-TFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGL 125
           ILLT+ P NP  NREKM   +  T     +++ IQ VL+LY                +G 
Sbjct: 105 ILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA---------------SGR 164

Query: 126 LAGLVIDSGDGVTHVISSFFELACQ--------MGVDIKGALLDLIPPRG 167
             G+V+DSGDGV+H +  +   A           G D+  AL+ ++  RG
Sbjct: 165 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG 199

[Close]
BLAST of Cucsa.100750 vs. TAIR10
Match: AT2G42100.1 (AT2G42100.1 Actin-like ATPase superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 1 

Query: 66  ILLTDPPFNPSKNREKMRPCL-RSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGL 125
           ILLT+ P NP  NREKM   +  S  F  ++I IQ VL+LY                +G 
Sbjct: 106 ILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYS---------------SGR 165

Query: 126 LAGLVIDSGDGVTHVI 141
             G+V+DSGDGV+H +
Sbjct: 166 TTGIVLDSGDGVSHTV 166

[Close]
BLAST of Cucsa.100750 vs. TAIR10
Match: AT5G09810.1 (AT5G09810.1 actin 7)

HSP 1 Score: 52.4 bits (124), Expect = 3.2e-07
Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 1 

Query: 66  ILLTDPPFNPSKNREKMRPCLRST-TFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGL 125
           +LLT+ P NP  NREKM   +  T     +++ IQ VL+LY                +G 
Sbjct: 105 VLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA---------------SGR 164

Query: 126 LAGLVIDSGDGVTHVISSFFELACQ--------MGVDIKGALLDLIPPRG 167
             G+V+DSGDGV+H +  +   A           G D+  +L+ ++  RG
Sbjct: 165 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERG 199

[Close]
BLAST of Cucsa.100750 vs. NCBI nr
Match: gi|729411138|ref|XP_010556296.1| (PREDICTED: LOW QUALITY PROTEIN: actin-related protein 2 [Tarenaya hassleriana])

HSP 1 Score: 92.4 bits (228), Expect = 7.9e-16
Identity = 70/165 (42.42%), Postives = 81/165 (49.09%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AEF HQL +SY    G+++       +        +  N +   PS       CKILLTD
Sbjct: 65  AEFRHQLDISYPVHNGIVQNW-----DDMGHIWDHAFNNELKINPSD------CKILLTD 124

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPSKNREKM         F GVFIQIQ VLTLY                 GLL GLV
Sbjct: 125 PPLNPSKNREKMVETMFEKYNFAGVFIQIQAVLTLYA---------------QGLLTGLV 184

Query: 131 IDSGDGVTHVIS-----SFFELACQM---GVDIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M   G  I   L+DL+  RG
Sbjct: 185 IDSGDGVTHVVPVVDGYSFPHLTKRMNIAGRHITSYLVDLLSRRG 203

[Close]
BLAST of Cucsa.100750 vs. NCBI nr
Match: gi|695078387|ref|XP_009386576.1| (PREDICTED: actin-related protein 2 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15
Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AEF HQL +SY    G+++       +        +  + +   PS+      CKILLTD
Sbjct: 60  AEFRHQLDISYPVNNGIVQNW-----DDMGHVWDHAFYSELKIDPSE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPSKNREKM         F+GVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSKNREKMIETMFEKYNFSGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. NCBI nr
Match: gi|703160039|ref|XP_010112402.1| (hypothetical protein L484_010807 [Morus notabilis])

HSP 1 Score: 91.3 bits (225), Expect = 1.8e-15
Identity = 69/165 (41.82%), Postives = 82/165 (49.70%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AEF HQL +SY    G+++       +        +  N +   P++      CKILLTD
Sbjct: 60  AEFRHQLDISYPVNNGIVQNW-----DDMGHVWDHAFFNELKIDPTE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPSKNREKM         F GVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSKNREKMVETMFEKYNFAGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRG 198

[Close]
BLAST of Cucsa.100750 vs. NCBI nr
Match: gi|548847077|gb|ERN06281.1| (hypothetical protein AMTR_s00016p00217220 [Amborella trichopoda])

HSP 1 Score: 90.9 bits (224), Expect = 2.3e-15
Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AE  HQL +SY    G+++       +   +    +  N +   P++      CKILLTD
Sbjct: 60  AELRHQLDISYPVNNGIVQNW-----DDMGYVWDHAFFNELKIDPTE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPS+NREKM        +FTGVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSRNREKMIETMFEKYSFTGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLLRRG 198

[Close]
BLAST of Cucsa.100750 vs. NCBI nr
Match: gi|769811666|ref|XP_011623448.1| (PREDICTED: actin-related protein 2 isoform X2 [Amborella trichopoda])

HSP 1 Score: 90.9 bits (224), Expect = 2.3e-15
Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 1 

Query: 11  AEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTD 70
           AE  HQL +SY    G+++       +   +    +  N +   P++      CKILLTD
Sbjct: 60  AELRHQLDISYPVNNGIVQNW-----DDMGYVWDHAFFNELKIDPTE------CKILLTD 119

Query: 71  PPFNPSKNREKM-RPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLV 130
           PP NPS+NREKM        +FTGVFIQIQ VLTLY                 GLL GLV
Sbjct: 120 PPLNPSRNREKMIETMFEKYSFTGVFIQIQAVLTLYA---------------QGLLTGLV 179

Query: 131 IDSGDGVTHVIS-----SFFELACQMGV---DIKGALLDLIPPRG 167
           IDSGDGVTHV+      SF  L  +M V    I   L+DL+  RG
Sbjct: 180 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLLRRG 198

The following BLAST results are available for this feature:
BLAST of Cucsa.100750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARP2_ARATH1.6e-1651.79Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1[more]
ARP2_ORYSI3.0e-1537.58Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=3 SV=2[more]
ARP2_ORYSJ3.0e-1537.58Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2 PE=3 SV=1[more]
ARP2B_DANRE6.2e-1349.44Actin-related protein 2-B OS=Danio rerio GN=actr2b PE=2 SV=1[more]
ARP2A_DANRE1.1e-1248.31Actin-related protein 2-A OS=Danio rerio GN=actr2a PE=2 SV=1[more]
BLAST of Cucsa.100750 vs. TrEMBL
Match NameE-valueIdentityDescription
M0U825_MUSAM9.3e-1641.82Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1[more]
W9SL04_9ROSA1.2e-1541.82Uncharacterized protein OS=Morus notabilis GN=L484_010807 PE=3 SV=1[more]
W1PF76_AMBTC1.6e-1541.21Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00016p00217220 PE=3 SV=... [more]
A0A0D2PXM4_GOSRA4.6e-1541.82Uncharacterized protein OS=Gossypium raimondii GN=B456_001G275200 PE=3 SV=1[more]
A0A0D2QWS2_GOSRA4.6e-1541.82Uncharacterized protein OS=Gossypium raimondii GN=B456_001G275200 PE=3 SV=1[more]
BLAST of Cucsa.100750 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27000.18.9e-1851.79 actin related protein 2[more]
AT2G37620.11.4e-0732.73 actin 1[more]
AT3G53750.11.4e-0732.73 actin 3[more]
AT2G42100.11.9e-0740.79 Actin-like ATPase superfamily protein[more]
AT5G09810.13.2e-0730.91 actin 7[more]
BLAST of Cucsa.100750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|729411138|ref|XP_010556296.1|7.9e-1642.42PREDICTED: LOW QUALITY PROTEIN: actin-related protein 2 [Tarenaya hassleriana][more]
gi|695078387|ref|XP_009386576.1|1.3e-1541.82PREDICTED: actin-related protein 2 [Musa acuminata subsp. malaccensis][more]
gi|703160039|ref|XP_010112402.1|1.8e-1541.82hypothetical protein L484_010807 [Morus notabilis][more]
gi|548847077|gb|ERN06281.1|2.3e-1541.21hypothetical protein AMTR_s00016p00217220 [Amborella trichopoda][more]
gi|769811666|ref|XP_011623448.1|2.3e-1541.21PREDICTED: actin-related protein 2 isoform X2 [Amborella trichopoda][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR027306Arp2
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0007015actin filament organization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0007015 actin filament organization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.100750.1Cucsa.100750.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPANTHERPTHR11937ACTINcoord: 123..140
score: 9.6E-22coord: 53..107
score: 9.6
IPR004000Actin familyPFAMPF00022Actincoord: 59..140
score: 1.
IPR027306Actin-related protein 2PANTHERPTHR11937:SF149ACTIN-RELATED PROTEIN 2-A-RELATEDcoord: 123..140
score: 9.6E-22coord: 53..107
score: 9.6
NoneNo IPR availableGENE3DG3DSA:3.30.420.40coord: 64..141
score: 1.

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.100750Melon (DHL92) v3.5.1cgymeB132
Cucsa.100750Watermelon (Charleston Gray)cgywcgB134
Cucsa.100750Watermelon (97103) v1cgywmB137
Cucsa.100750Melon (DHL92) v3.6.1cgymedB132
Cucsa.100750Cucumber (Chinese Long) v3cgycucB126
Cucsa.100750Watermelon (97103) v2cgywmbB127