BLAST of Cucsa.088400 vs. Swiss-Prot
Match:
PUS3_ARATH (RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 PE=2 SV=1)
HSP 1 Score: 655.2 bits (1689), Expect = 5.4e-187
Identity = 321/473 (67.86%), Postives = 389/473 (82.24%), Query Frame = 1
Query: 8 HLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKN 67
+L + R YSR++PPP + +IRV+NN+A LG PK+GP RQL+SLPPFPG+PLPGKN
Sbjct: 12 YLTVLIRRYSRVAPPPSS----VIRVTNNVAHLGPPKQGPLPRQLISLPPFPGHPLPGKN 71
Query: 68 QVGVSGEST----HVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECP--QLGGLDEKGNL 127
G G+ HVTAI WVKYYF+EI D IQ+HF KGLVQ+E + +++
Sbjct: 72 -AGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGA 131
Query: 128 KPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDS 187
PMRKI+ E+M+ G +I LPVS+AEM++++R+DTIPSGTLYPNADEI YLQRLV++KDS
Sbjct: 132 IPMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDS 191
Query: 188 AIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKE 247
AIIVLNKPPKLPVKG +P+HNSMDALA AALS+ D+GP+LVHRLDRE+SG+L+MGRTKE
Sbjct: 192 AIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKE 251
Query: 248 SVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDG 307
S+D+L +FS+ + +CKAW +AC A YQ+YWALVIG P+E+EG+ISAPLSKVLLDDG
Sbjct: 252 SIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDG 311
Query: 308 KTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPI 367
KT+RV+LA + EASQ+AITEY+VLGP INGCSW+EL P TSRKHQLR+HCAEALGTPI
Sbjct: 312 KTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPI 371
Query: 368 VGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELV 427
VGDYKYGWFVH+RWKQMP+VD+EP +G+PYKLRRPEGLDVQKGSVLSKVPLLHLHCRE+V
Sbjct: 372 VGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMV 431
Query: 428 LPNIAKFLNVFYGKGPNRPVSS---FDSDLLRFVARMPSHMRISWNLMSSYLV 472
LPNIAKFL+V + P+ + DLLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 432 LPNIAKFLHVM-NQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 478
BLAST of Cucsa.088400 vs. Swiss-Prot
Match:
PUS3_ORYSJ (RNA pseudouridine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0520100 PE=2 SV=1)
HSP 1 Score: 586.6 bits (1511), Expect = 2.3e-166
Identity = 294/475 (61.89%), Postives = 362/475 (76.21%), Query Frame = 1
Query: 6 RRHLLLATRCYSRISPPPPAYAKPII-RVS-NNIAQLGSPKEGPKARQLLSLPPFPGY-- 65
RR + A R SR++PP PA A P++ RV +N+A+LG PK GP+ RQLLSLPPFPG
Sbjct: 5 RRRVGAAVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGD 64
Query: 66 --PLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECP--QLGGLDE 125
PLPG+ + VTA+ WVK+Y ++ +Q+HF K LV EC ++
Sbjct: 65 GDPLPGRK----AAAPRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETI 124
Query: 126 KGNLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVK 185
K ++KI+ ++ME G RIHLPVSVAE ++ +R++TIP+ TL+PN DEI+YL+RLV
Sbjct: 125 KSQKHHLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVI 184
Query: 186 YKDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMG 245
+KDSAI+VLNKPPK+P+KG LPVHNSMD LA AALSY ++GPKLVHRLDRESSG+LL G
Sbjct: 185 HKDSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFG 244
Query: 246 RTKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVL 305
RTKES L WLF+++ AK + W AC A Q+YWALVIG P+EREG+ISAPLSKVL
Sbjct: 245 RTKESFTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVL 304
Query: 306 LDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEAL 365
LDDGK ERVILA+ + I+ +QEA+T YRV+GPTI+GCSWIEL P T RKHQLR+HCAEAL
Sbjct: 305 LDDGKAERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEAL 364
Query: 366 GTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHC 425
GTPIVGDYKYGWFVH+RWKQ P+ D EP +G PYKLRRPEGL++QKGSVLSKVPLLHLHC
Sbjct: 365 GTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHC 424
Query: 426 RELVLPNIAKFLNVFYGKGPN-RPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
RE+V+PNIAKFL+ N P S +LLRF+A MP+HM+ISWN+MSSYLV
Sbjct: 425 REMVIPNIAKFLSSNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 475
BLAST of Cucsa.088400 vs. Swiss-Prot
Match:
PUS4_ARATH (RNA pseudouridine synthase 4, mitochondrial OS=Arabidopsis thaliana GN=At3g19440 PE=2 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 5.0e-68
Identity = 160/425 (37.65%), Postives = 241/425 (56.71%), Query Frame = 1
Query: 53 LSLPPFPGYP---------LPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKG 112
L+LPPF L + V S +++ TA+RW+ ++ + +Q FR
Sbjct: 56 LTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLR 115
Query: 113 LVQVECPQLGGLDEKGNLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLY 172
V+ E DE + ++++ + E + G RI+LP+SV + +
Sbjct: 116 QVRREMSMSVDGDELQRSQ-LKRVAAKESLNVGDRIYLPLSVDND--TPQTPPAKKESFQ 175
Query: 173 PNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLV 232
+ +E K++ LV YKD AIIVLNKP L V+G + S+D LA + L +D + P+LV
Sbjct: 176 CSDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLV 235
Query: 233 HRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPR 292
HRLDR+ SG+L++ RT+ + L +F + + ++ + +KY ALVIGCP
Sbjct: 236 HRLDRDCSGLLVLARTQTAATVLHSIFRE-KTTGASAYGVKKNVKSLKRKYMALVIGCPP 295
Query: 293 EREGVISAPLSKVLLDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRT 352
+ G ISAPL KV++DDGK+ER+ + + + ++Q AITEYRV+ + +G +W+EL P T
Sbjct: 296 RQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLT 355
Query: 353 SRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQK 412
RKHQLR+HCAE LGTPIVGDYKYGW H+ + + P + P GLD+
Sbjct: 356 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVSSENNPTK----QSSSPFGLDLDG 415
Query: 413 GSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISW 469
G V SK P LHLH +++ LPNI++ L + +S DS L+F A +PSHM++S+
Sbjct: 416 GDVSSKQPHLHLHSKQIDLPNISQLLEKMQ-VSSDSDISDLDS--LKFDAPLPSHMQLSF 469
BLAST of Cucsa.088400 vs. Swiss-Prot
Match:
PUS4_ORYSJ (RNA pseudouridine synthase 4, mitochondrial OS=Oryza sativa subsp. japonica GN=Os09g0103500 PE=2 SV=1)
HSP 1 Score: 174.5 bits (441), Expect = 2.8e-42
Identity = 111/305 (36.39%), Postives = 168/305 (55.08%), Query Frame = 1
Query: 53 LSLPPFPGYPLPGKNQV-----GVSGESTH-VTAIRWVKYYFDEIQDSQIQSHFRKGLVQ 112
L LPPF + G G+ TAI+WV+ ++ S +Q FR V+
Sbjct: 53 LQLPPFAPLDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQKLFRLRKVK 112
Query: 113 --VECPQLGGLDEKGNLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYP 172
V ++ D +R++ + + + G + LPV++ E VA + +
Sbjct: 113 KNVVTAEISSADASAEQHRLRRVSAKDQLMPGDILFLPVNLKESSVAEKTKK------FD 172
Query: 173 NADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVH 232
N +EI +L+ L YKD AIIV+NKPP +PV+G + + NS+D LA + + + P+LVH
Sbjct: 173 NRNEINFLRGLEIYKDEAIIVVNKPPGMPVQGGVGIKNSIDVLA-SMFEENSSEAPRLVH 232
Query: 233 RLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQ-KYWALVIGCPR 292
RLDR+ SGIL++GR + S L +F + T A + Q KY ALVIG PR
Sbjct: 233 RLDRDCSGILVLGRNQLSTSMLHAIFR-----EKTADALADGTQHVLQRKYVALVIGTPR 292
Query: 293 EREGVISAPLSKVLLDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRT 349
+G++SAPL+K+LL DGK+ER+ + ++ + Q+A+TEYRV+ G +W+EL PRT
Sbjct: 293 HPKGLLSAPLAKILLQDGKSERLTIRASSNAASVQDALTEYRVIESCPQGYTWLELFPRT 345
BLAST of Cucsa.088400 vs. Swiss-Prot
Match:
RUSD4_XENTR (RNA pseudouridylate synthase domain-containing protein 4 OS=Xenopus tropicalis GN=rpusd4 PE=2 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 6.9e-25
Identity = 101/313 (32.27%), Postives = 145/313 (46.33%), Query Frame = 1
Query: 136 GARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRL---VKYKDSAIIVLNKPPKL 195
GAR+ AE KV + T NA I YL+ L V +D ++++NKP L
Sbjct: 11 GARMLAERIRAERKV---LEGAARETSRKNAPTIVYLRELKSQVVREDPELVLVNKPHGL 70
Query: 196 PVKGTLPVHNSMDALADAALSYDYD---DGPKLVHRLDRESSGILLMGRTKESVDHLQWL 255
PV G V S+ +L A + + + KL HRLDR+++G L++ RT E+ + +Q
Sbjct: 71 PVHGGPTVERSVASLLPALAKHHFGWKAEPLKLCHRLDRDTTGALILARTTEAAERVQ-- 130
Query: 256 FSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKV------------- 315
+A E ++ YWAL +G P REG++ P+ +
Sbjct: 131 -----------QALRE--REVHRVYWALCLGTPSPREGILDIPIMEKETSGPQKHYKMAL 190
Query: 316 -----LLDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRI 375
+ ++G ERV + A EA+T YR LG +G S +EL P T KHQLR+
Sbjct: 191 SPRFRVSEEGAVERVRVPRSA-----HEAVTRYRTLGAA-SGASLVELHPITGVKHQLRV 250
Query: 376 HCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVP 425
H A L PI+GD+KY + R Q P P + R GL V + LS
Sbjct: 251 HLALGLNCPILGDHKYSHW-GRLAPQKP----------PDSVLRALGLTVPQARTLS--- 284
BLAST of Cucsa.088400 vs. TrEMBL
Match:
A0A0A0LQ04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402020 PE=4 SV=1)
HSP 1 Score: 962.6 bits (2487), Expect = 1.8e-277
Identity = 470/471 (99.79%), Postives = 471/471 (100.00%), Query Frame = 1
Query: 1 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG
Sbjct: 73 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 132
Query: 61 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 120
YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN
Sbjct: 133 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 192
Query: 121 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 193 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 252
Query: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240
SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK
Sbjct: 253 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 312
Query: 241 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300
ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD
Sbjct: 313 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 372
Query: 301 GKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
GKTERV+LANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 373 GKTERVVLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 432
Query: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 433 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 492
Query: 421 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV
Sbjct: 493 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 543
BLAST of Cucsa.088400 vs. TrEMBL
Match:
B9SLG9_RICCO (Ribosomal pseudouridine synthase, putative OS=Ricinus communis GN=RCOM_0686660 PE=4 SV=1)
HSP 1 Score: 721.8 bits (1862), Expect = 5.2e-205
Identity = 348/466 (74.68%), Postives = 393/466 (84.33%), Query Frame = 1
Query: 7 RHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGK 66
R ++ R YSRI+PPPPAYA P+IRVSNN+A LGSPK+GPK RQLLSLPPFPG PLPG+
Sbjct: 8 RRVVSQGRSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFPGLPLPGR 67
Query: 67 NQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLKPMRK 126
N + ++HVTAI WVKYYFDEI DS IQSHF KGL +ECP G E G +RK
Sbjct: 68 NSM-----ASHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEYGGQMSLRK 127
Query: 127 IRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVL 186
I+ +IME GAR+H+ VSVAE ++++RFDTIPSGTLYPNADEI+YLQRLVKYKDSAIIVL
Sbjct: 128 IKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVL 187
Query: 187 NKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHL 246
NKPP+LPVKG LP+HNSMDALA AALSYDYD+GPKLV RLDRESSG+LLMGRTKES+DHL
Sbjct: 188 NKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHL 247
Query: 247 QWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERV 306
QWLFS++ + CKAW +AC ATYQ+YWALVIG P+E+EG+I APLSKVLL+DGKTERV
Sbjct: 248 QWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERV 307
Query: 307 ILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYK 366
+LA + +EASQEA+TEYRVLGP INGCSWIEL P TSRKHQLR+HCAEALGTPIVGDYK
Sbjct: 308 VLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYK 367
Query: 367 YGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 426
YGW VH+RWKQMPRVD+EP SG+PYKLRRP GLDVQKGSVLSKVPLLHLHCRE VLPNIA
Sbjct: 368 YGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIA 427
Query: 427 KFLNVFYGKGPN-RPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
KFL V K N P DLLRFVA MP+HM+ISWNLMSSYLV
Sbjct: 428 KFLAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468
BLAST of Cucsa.088400 vs. TrEMBL
Match:
D7SS16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0054g00780 PE=4 SV=1)
HSP 1 Score: 717.2 bits (1850), Expect = 1.3e-203
Identity = 348/470 (74.04%), Postives = 403/470 (85.74%), Query Frame = 1
Query: 9 LLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQ 68
L R YSRI+PP PA A P+IRVSNN+AQLGSPKEGPK RQLLSLPPFP +PLPGK+
Sbjct: 12 LFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSL 71
Query: 69 VGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQL--GGLDEKGNLKPMRK 128
V VSG THVTAI W+KYYFDEI S +QSHF KGLV +E L L+++G +KP+RK
Sbjct: 72 VNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRK 131
Query: 129 IRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRL--VKYKDSAII 188
I+ E+ME G RI++PVSVAE ++++RFDTIPSGTL+PNADEI+YLQRL +K++D AI+
Sbjct: 132 IKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQDPAIL 191
Query: 189 VLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVD 248
VLNKPPK+P+KG LPVHNSMDALA AAL++DY++GPKLVHRLDRESSG+LLMGRTKESV
Sbjct: 192 VLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVA 251
Query: 249 HLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTE 308
HL WLFS+I AK KAW++AC AT Q+YWALVIG P+++EGVI APLSKVLLDDGKTE
Sbjct: 252 HLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTE 311
Query: 309 RVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGD 368
RVILAN++ +EASQEAITEYRVLGP INGCSWIELCPRTSRKHQLR+HCAEALGTPIVGD
Sbjct: 312 RVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGD 371
Query: 369 YKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPN 428
YKYGWFVHRRWKQMPRVD+EP +G+PYK+RRPEGLDVQKGSVLSKVPLLHLHCREL+LPN
Sbjct: 372 YKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPN 431
Query: 429 IAKFLNVFYGKGPNR---PVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
IAKFL + K N+ P S D+LRFVA MP+HM+ISWNLMSSYLV
Sbjct: 432 IAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481
BLAST of Cucsa.088400 vs. TrEMBL
Match:
A0A067JP47_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21770 PE=4 SV=1)
HSP 1 Score: 716.5 bits (1848), Expect = 2.2e-203
Identity = 346/466 (74.25%), Postives = 396/466 (84.98%), Query Frame = 1
Query: 7 RHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGK 66
+ +L R YSRI+ PPPAYA+P+IRVSNN+A LGSPK+GPK RQLLSLPPFPG PLPGK
Sbjct: 8 KRVLSKVRSYSRIAAPPPAYAQPVIRVSNNVAYLGSPKDGPKPRQLLSLPPFPGLPLPGK 67
Query: 67 NQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLKPMRK 126
V ++ VTAI WVKYYFDEI DS IQSHF +GLVQ+EC Q GG MRK
Sbjct: 68 TSV-----ASRVTAISWVKYYFDEIPDSVIQSHFNRGLVQMECMQHGGETF------MRK 127
Query: 127 IRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVL 186
I+ ++ME GAR+ +PVSVAE ++++RFDTIPSGTLYPNADEI+YLQRLVKYKDSAIIVL
Sbjct: 128 IKPSDVMEVGARVLIPVSVAETRISKRFDTIPSGTLYPNADEIEYLQRLVKYKDSAIIVL 187
Query: 187 NKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHL 246
NKPPKLP+KG LPVHNSMDALA AAL+YDYD+GPKLV RLDRESSG++LMGRTKESVDHL
Sbjct: 188 NKPPKLPIKGNLPVHNSMDALAAAALTYDYDEGPKLVQRLDRESSGLILMGRTKESVDHL 247
Query: 247 QWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERV 306
QW+FS+ + + CK W +AC AT Q+YWAL+IG P+E+EG+I APLSKVLL+DGKTER+
Sbjct: 248 QWMFSDQKKSNSYCKDWNDACQATCQRYWALIIGSPKEKEGLIRAPLSKVLLNDGKTERI 307
Query: 307 ILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYK 366
+LA + EASQEA+TEYRVLGPTINGCSW+ELCP TSRKHQLR+HCAEALGTPIVGDYK
Sbjct: 308 VLAQNSGFEASQEALTEYRVLGPTINGCSWVELCPLTSRKHQLRVHCAEALGTPIVGDYK 367
Query: 367 YGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 426
YGWF+HRRWKQMPRVD+EP SG+PYKLRRPEG+DVQKGSVLSKVPLLHLHCRELVLPNIA
Sbjct: 368 YGWFMHRRWKQMPRVDIEPFSGKPYKLRRPEGIDVQKGSVLSKVPLLHLHCRELVLPNIA 427
Query: 427 KFLNVFYGKGPN-RPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
KFL+V K N P S DLLRFVA MP+HM+ISWNLMSSYLV
Sbjct: 428 KFLDVLNQKSKNIHPALSAKPDLLRFVASMPTHMKISWNLMSSYLV 462
BLAST of Cucsa.088400 vs. TrEMBL
Match:
A0A061GAV8_THECC (Pseudouridine synthase family protein OS=Theobroma cacao GN=TCM_027759 PE=4 SV=1)
HSP 1 Score: 707.6 bits (1825), Expect = 1.0e-200
Identity = 345/475 (72.63%), Postives = 395/475 (83.16%), Query Frame = 1
Query: 1 MQRS-MRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFP 60
MQ+S + L R YSR++PPPPAYA P++RVSN++A LG+PK+GPK RQLLSLPPFP
Sbjct: 1 MQKSRLGWQFLSLVRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFP 60
Query: 61 GYPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGG--LDE 120
GYPLPGKN G + VTAI W+KYYFDEI DS IQSHF KGLVQ+E G ++
Sbjct: 61 GYPLPGKNP----GGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIER 120
Query: 121 KGNLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVK 180
G +KP+RKI+ E+ME G R+ +PVS+AE ++++RFD IPSGTLYPN DEI YLQRLVK
Sbjct: 121 DGLMKPLRKIKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVK 180
Query: 181 YKDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMG 240
YKD AI+VLNKPPKLPVKG+LPVHNSMDALA AALSYD+D+GPKLVHRLDRESSG+LLMG
Sbjct: 181 YKDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMG 240
Query: 241 RTKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVL 300
RTKESV HL WLF+++ K +CKAW +AC+ YQ++WALVIG P+E+EG+I APLSK+L
Sbjct: 241 RTKESVAHLHWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKIL 300
Query: 301 LDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEAL 360
LDDGKTERVILA +EASQEAITEYRVLGP INGCSWIEL P TSRKHQLR+HCAEAL
Sbjct: 301 LDDGKTERVILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEAL 360
Query: 361 GTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHC 420
GTPIVGDYKYGWFVHRRWKQMPRVD+EP +G+PYKLRRPEGLDVQKGSVLSKVPLLHLHC
Sbjct: 361 GTPIVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHC 420
Query: 421 RELVLPNIAKFLNVFYGKGPNRPVS-SFDSDLLRFVARMPSHMRISWNLMSSYLV 472
RELVLPNIAKFL V P + S DLLRFVA MP HM+ISWNLMSSYLV
Sbjct: 421 RELVLPNIAKFLPVLNKNTETLPPALSMKPDLLRFVATMPKHMKISWNLMSSYLV 471
BLAST of Cucsa.088400 vs. TAIR10
Match:
AT1G78910.1 (AT1G78910.1 Pseudouridine synthase family protein)
HSP 1 Score: 655.2 bits (1689), Expect = 3.0e-188
Identity = 321/473 (67.86%), Postives = 389/473 (82.24%), Query Frame = 1
Query: 8 HLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKN 67
+L + R YSR++PPP + +IRV+NN+A LG PK+GP RQL+SLPPFPG+PLPGKN
Sbjct: 12 YLTVLIRRYSRVAPPPSS----VIRVTNNVAHLGPPKQGPLPRQLISLPPFPGHPLPGKN 71
Query: 68 QVGVSGEST----HVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECP--QLGGLDEKGNL 127
G G+ HVTAI WVKYYF+EI D IQ+HF KGLVQ+E + +++
Sbjct: 72 -AGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGA 131
Query: 128 KPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDS 187
PMRKI+ E+M+ G +I LPVS+AEM++++R+DTIPSGTLYPNADEI YLQRLV++KDS
Sbjct: 132 IPMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDS 191
Query: 188 AIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKE 247
AIIVLNKPPKLPVKG +P+HNSMDALA AALS+ D+GP+LVHRLDRE+SG+L+MGRTKE
Sbjct: 192 AIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKE 251
Query: 248 SVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDG 307
S+D+L +FS+ + +CKAW +AC A YQ+YWALVIG P+E+EG+ISAPLSKVLLDDG
Sbjct: 252 SIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDG 311
Query: 308 KTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPI 367
KT+RV+LA + EASQ+AITEY+VLGP INGCSW+EL P TSRKHQLR+HCAEALGTPI
Sbjct: 312 KTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPI 371
Query: 368 VGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELV 427
VGDYKYGWFVH+RWKQMP+VD+EP +G+PYKLRRPEGLDVQKGSVLSKVPLLHLHCRE+V
Sbjct: 372 VGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMV 431
Query: 428 LPNIAKFLNVFYGKGPNRPVSS---FDSDLLRFVARMPSHMRISWNLMSSYLV 472
LPNIAKFL+V + P+ + DLLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 432 LPNIAKFLHVM-NQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 478
BLAST of Cucsa.088400 vs. TAIR10
Match:
AT3G19440.1 (AT3G19440.1 Pseudouridine synthase family protein)
HSP 1 Score: 260.0 bits (663), Expect = 2.8e-69
Identity = 160/425 (37.65%), Postives = 241/425 (56.71%), Query Frame = 1
Query: 53 LSLPPFPGYP---------LPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKG 112
L+LPPF L + V S +++ TA+RW+ ++ + +Q FR
Sbjct: 56 LTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLR 115
Query: 113 LVQVECPQLGGLDEKGNLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLY 172
V+ E DE + ++++ + E + G RI+LP+SV + +
Sbjct: 116 QVRREMSMSVDGDELQRSQ-LKRVAAKESLNVGDRIYLPLSVDND--TPQTPPAKKESFQ 175
Query: 173 PNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLV 232
+ +E K++ LV YKD AIIVLNKP L V+G + S+D LA + L +D + P+LV
Sbjct: 176 CSDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLV 235
Query: 233 HRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPR 292
HRLDR+ SG+L++ RT+ + L +F + + ++ + +KY ALVIGCP
Sbjct: 236 HRLDRDCSGLLVLARTQTAATVLHSIFRE-KTTGASAYGVKKNVKSLKRKYMALVIGCPP 295
Query: 293 EREGVISAPLSKVLLDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRT 352
+ G ISAPL KV++DDGK+ER+ + + + ++Q AITEYRV+ + +G +W+EL P T
Sbjct: 296 RQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLT 355
Query: 353 SRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQK 412
RKHQLR+HCAE LGTPIVGDYKYGW H+ + + P + P GLD+
Sbjct: 356 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVSSENNPTK----QSSSPFGLDLDG 415
Query: 413 GSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISW 469
G V SK P LHLH +++ LPNI++ L + +S DS L+F A +PSHM++S+
Sbjct: 416 GDVSSKQPHLHLHSKQIDLPNISQLLEKMQ-VSSDSDISDLDS--LKFDAPLPSHMQLSF 469
BLAST of Cucsa.088400 vs. TAIR10
Match:
AT1G76050.2 (AT1G76050.2 Pseudouridine synthase family protein)
HSP 1 Score: 52.4 bits (124), Expect = 9.0e-07
Identity = 58/243 (23.87%), Postives = 98/243 (40.33%), Query Frame = 1
Query: 162 LYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPVK-------GTLP---VHNSMDALADAA 221
L P E + + + Y+D ++V+NKP + V GTL +H+ D +
Sbjct: 136 LQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPCVDYS 195
Query: 222 LSYDYDDG-----------------------PKLVHRLDRESSGILLMGRTKESVDHLQW 281
S + DD P +VHRLD+ ++G+L++ + + S HL
Sbjct: 196 NSEEDDDSDEETFSDDEEMTTSPSSYAASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAE 255
Query: 282 LFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVIL 341
F + + Y +L G P +G I P+ + D +
Sbjct: 256 QFK---------------LHTIERVYVSLTTGVPSPPQGRIEIPIGR----DSSNRIRMA 315
Query: 342 ANKASIEA--SQEAITEYRVLGPTINGCS-WIELCPRTSRKHQLRIHCAEALGTPIVGDY 369
A + ++ A + Y+V+ G S +E T R HQ+R H A+ +G P++GD
Sbjct: 316 AIPGGVRGGRARHAASRYKVIETFAGGGSALVEWRLETGRTHQIRAH-AKYMGVPLLGDE 358
BLAST of Cucsa.088400 vs. NCBI nr
Match:
gi|778672934|ref|XP_011649894.1| (PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1 [Cucumis sativus])
HSP 1 Score: 962.6 bits (2487), Expect = 2.5e-277
Identity = 470/471 (99.79%), Postives = 471/471 (100.00%), Query Frame = 1
Query: 1 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG
Sbjct: 1 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
Query: 61 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 120
YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN
Sbjct: 61 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 120
Query: 121 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
Query: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240
SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK
Sbjct: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240
Query: 241 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300
ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD
Sbjct: 241 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300
Query: 301 GKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
GKTERV+LANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
Query: 421 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV
Sbjct: 421 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471
BLAST of Cucsa.088400 vs. NCBI nr
Match:
gi|700207975|gb|KGN63094.1| (hypothetical protein Csa_2G402020 [Cucumis sativus])
HSP 1 Score: 962.6 bits (2487), Expect = 2.5e-277
Identity = 470/471 (99.79%), Postives = 471/471 (100.00%), Query Frame = 1
Query: 1 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG
Sbjct: 73 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 132
Query: 61 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 120
YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN
Sbjct: 133 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 192
Query: 121 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 193 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 252
Query: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240
SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK
Sbjct: 253 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 312
Query: 241 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300
ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD
Sbjct: 313 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 372
Query: 301 GKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
GKTERV+LANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 373 GKTERVVLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 432
Query: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 433 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 492
Query: 421 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV
Sbjct: 493 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 543
BLAST of Cucsa.088400 vs. NCBI nr
Match:
gi|659081205|ref|XP_008441208.1| (PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Cucumis melo])
HSP 1 Score: 917.1 bits (2369), Expect = 1.2e-263
Identity = 453/473 (95.77%), Postives = 460/473 (97.25%), Query Frame = 1
Query: 1 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
MQRS+RRHLLLATR YSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG
Sbjct: 1 MQRSIRRHLLLATRYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
Query: 61 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 120
+PLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQS FRKGLVQVECPQLGG DE GN
Sbjct: 61 HPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSLFRKGLVQVECPQLGGFDENGN 120
Query: 121 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
LKPMRKIRSGEIME GARIHLPVSVAEMKV+RRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSGEIMEIGARIHLPVSVAEMKVSRRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
Query: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240
SAIIVLNKPPKLPVKGTLPVHNSMDALA AALSYDYD GPKLVHRLDRESSGILLMGRTK
Sbjct: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALAAAALSYDYDYGPKLVHRLDRESSGILLMGRTK 240
Query: 241 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300
ESVDHLQWLFSNIRN KFTCKAWEEACNATYQKYWALVIG PREREG+ISAPLSKVLLDD
Sbjct: 241 ESVDHLQWLFSNIRNGKFTCKAWEEACNATYQKYWALVIGRPREREGLISAPLSKVLLDD 300
Query: 301 GKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
GKTERV+LANKAS+EASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKASLEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
Query: 421 VLPNIAKFLNVFYGKGP--NRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
VLPNIAKFLNVFY KGP +RPVSSFD DLLRFVARMPSHMRISWNLMSSYLV
Sbjct: 421 VLPNIAKFLNVFYDKGPISHRPVSSFDFDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Cucsa.088400 vs. NCBI nr
Match:
gi|778672937|ref|XP_011649895.1| (PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2 [Cucumis sativus])
HSP 1 Score: 892.9 bits (2306), Expect = 2.4e-256
Identity = 443/471 (94.06%), Postives = 444/471 (94.27%), Query Frame = 1
Query: 1 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG
Sbjct: 1 MQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
Query: 61 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 120
YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN
Sbjct: 61 YPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGN 120
Query: 121 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
Query: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240
SAIIVLNKPPKLPVK VHRLDRESSGILLMGRTK
Sbjct: 181 SAIIVLNKPPKLPVK---------------------------VHRLDRESSGILLMGRTK 240
Query: 241 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300
ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD
Sbjct: 241 ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300
Query: 301 GKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
GKTERV+LANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
Query: 421 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 472
VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV
Sbjct: 421 VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 444
BLAST of Cucsa.088400 vs. NCBI nr
Match:
gi|1009156134|ref|XP_015896084.1| (PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Ziziphus jujuba])
HSP 1 Score: 726.1 bits (1873), Expect = 4.0e-206
Identity = 347/469 (73.99%), Postives = 400/469 (85.29%), Query Frame = 1
Query: 6 RRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPG 65
+R + L+ R YSRISPPPP KP+IRVSNN+A+LG PKEGPK RQLLSLPPFPG+PLPG
Sbjct: 7 KRPIWLSIRKYSRISPPPPVNVKPVIRVSNNVARLGCPKEGPKPRQLLSLPPFPGFPLPG 66
Query: 66 KNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGG--LDEKGNLKP 125
KN V V G S HVTAI WVKYYF ++D IQSHF KGLV EC +G ++++G +KP
Sbjct: 67 KNMVTVPGRSPHVTAISWVKYYFYGVKDDVIQSHFNKGLVHRECSNMGESIVEKEGQMKP 126
Query: 126 MRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAI 185
MR+++ E+M+ G R+H+PVSVAE +++RRFDTIPSGTLYPNADEIKYLQRLVKY+D AI
Sbjct: 127 MREVKPSEVMKVGDRVHVPVSVAESRISRRFDTIPSGTLYPNADEIKYLQRLVKYRDWAI 186
Query: 186 IVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESV 245
IVLNKPP+LPVKG LP+HNSMDALA AALSY Y++GPKLVHRLDRESSG+++MGRTKES+
Sbjct: 187 IVLNKPPRLPVKGHLPIHNSMDALAAAALSYGYNEGPKLVHRLDRESSGLIIMGRTKESI 246
Query: 246 DHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKT 305
DHL WLFSN + KAW +AC ATYQKYWALVIG P+E+EG+I APLSKVLLDDGKT
Sbjct: 247 DHLNWLFSNYKEVNTPHKAWNDACEATYQKYWALVIGSPKEKEGLICAPLSKVLLDDGKT 306
Query: 306 ERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVG 365
ERVILA+++ E SQ+AITEYRVLGP INGCSW+EL P TSRKHQLR+HCAEALGTPIVG
Sbjct: 307 ERVILAHQSGFEPSQKAITEYRVLGPMINGCSWVELHPHTSRKHQLRVHCAEALGTPIVG 366
Query: 366 DYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLP 425
DYKYGWFVHRRWKQMPRVD+E +G+PYKLRRP+GLDVQKGSVLSKVPLLHLHCRELVLP
Sbjct: 367 DYKYGWFVHRRWKQMPRVDIEATTGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLP 426
Query: 426 NIAKFLNVFYGKGPNRPVS-SFDSDLLRFVARMPSHMRISWNLMSSYLV 472
NIAKFL VF GK + S + D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 427 NIAKFLKVFNGKSEYQSTEVSLERDVLRFVASMPSHMKISWNLMSSYLV 475
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PUS3_ARATH | 5.4e-187 | 67.86 | RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910... | [more] |
PUS3_ORYSJ | 2.3e-166 | 61.89 | RNA pseudouridine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica GN=O... | [more] |
PUS4_ARATH | 5.0e-68 | 37.65 | RNA pseudouridine synthase 4, mitochondrial OS=Arabidopsis thaliana GN=At3g19440... | [more] |
PUS4_ORYSJ | 2.8e-42 | 36.39 | RNA pseudouridine synthase 4, mitochondrial OS=Oryza sativa subsp. japonica GN=O... | [more] |
RUSD4_XENTR | 6.9e-25 | 32.27 | RNA pseudouridylate synthase domain-containing protein 4 OS=Xenopus tropicalis G... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LQ04_CUCSA | 1.8e-277 | 99.79 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402020 PE=4 SV=1 | [more] |
B9SLG9_RICCO | 5.2e-205 | 74.68 | Ribosomal pseudouridine synthase, putative OS=Ricinus communis GN=RCOM_0686660 P... | [more] |
D7SS16_VITVI | 1.3e-203 | 74.04 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0054g00780 PE=4 SV=... | [more] |
A0A067JP47_JATCU | 2.2e-203 | 74.25 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21770 PE=4 SV=1 | [more] |
A0A061GAV8_THECC | 1.0e-200 | 72.63 | Pseudouridine synthase family protein OS=Theobroma cacao GN=TCM_027759 PE=4 SV=1 | [more] |