Cucsa.088230 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.088230
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	DNA-directed RNA polymerase II, putative
Location	scaffold00888 : 611614 .. 617141 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTTCGAAATCCAAATTCAGATTATCGTAACCACAATCTGATTCCACCCACCAGATTCATGACTAGGAATTGATCCATGATGAATCGAAAATTCTGCAACTGCGCTATCTGTGAGAATTCAAATCAAGCTTCCATTTGCACCGGTTGCGTCAATCTCAGGTATCCACGTTCTTCAATACTCTAATTAACTTCCCTGCTTCATTCCGAGTAGATGCTTGTTGAATTCAACTCATCTTTTTCGTTTCAATTTTCCGCCAGATTGAATGACTACAATTCTTCGTTGAAATCATTGAGAGCTCGGCGAGATGTGTTGTATTCGAGGTTGAGTGATGTGCTTGTGGCAAAGGTTTGGTGGTCTTCATCATTGATTTTCGGTCTCTTTAATTTTCTCCACGTTTGAGGTTTTAACTGTCATGAATGTTCCTTTCTGAAATTCCTCTACCAAATTACCGGGAAAAGAATCTTGGTAGAGTTGCTTTCTAGAAATTGCTGACGATATGGCCGATGCTTCTATTTTTTCAATTATTCTTTTGTTATTTCATCAATTATTACATAGCATTCGATCTTATGTTTTTACTTCGGCTTCGTGTAGTTCCATTTCTTTACTGTTGGTTATTATGTAGGGAATAGTATTATTTATCCATGCAATGTACTTGTGGAGAAAGTGCCCTGGTCCAGAAATTTTAATTTGTTTGATTGTTGCTTCTCAGGGGAAGGCAGACGACCAATTAAACTGGAGAGTGACAAGGAATGAGAAACTTACGAGCTTAAGGGAGAAACTCAGGCGCAGTAGAGAGCAACTCGAGCAAGGTTTTTGAACCTTCAATAGAACATTTGAAATCAATCTATTCCCTTAGATGTTTGCTAAATTATGTTATGTGCAAGTGCTTATCAAATTTAAAAAATTATTTTATTCGATCAGGAAAGGCAGAGATTGAGATGAAATCCTTTGATCTCCAATTGAAATATGCAATGCTTGAATCAGCCCGTTCAGTGGTACTCCTTTTATTTATTTTCTATTTATACTAGTTGTATTACCTTTCCTCCTCTCTATTTAAACATCGAGAATGGTCGTTTGTGGATTTTTTTATGCAGTTGGAAAAACAACGACTCGAACAACTGGAGAAGGCATATCCTGACCTTATTAGCACCAAGAATCTGGGACATGTATGAACTACATTCCCCTTTTAATATGGAATTTATTTtCTAACCTGTCTTTCAAATCTCGTTTCTTTCTAATATATTTTTGCATTAATATACTTGTTACATGTGCCATTTATCTGCACGAACTGTTTAGGCTAAAAAAAAaTAGGGGAATGTTTGAACATATATAAATGTAGACAGTTAAACTTTACTTGGTTGATGCCTGAGAATTATGGTTCCCCACCACCCCCACACCCACATATCAAACTATGCTGAAGAATTCTATTTTTTTTtAGTTGGACCTCTTTCACAGTTAACTCTATGCTTAATGTAAAAATGTTTTATGGAAACAGATGGCAATCACCTCTGAACGCCTTCACAAACAATCTGTGGTCATAAAACAACTATGCAAATTGTTTCCACAACGTCGGGTAAGCTCTTATCTGTATGTTCATTTCACTTCCTGACTGCTTAGTACATGCTACTCACTGCTGTTGGCTTTCTAATGAATCATCTTTTTTCATAGACAACTTGATTATATGTTGCACAAAAATGTATTTGGATCTTTCCCCATGGTTACACTTTAGTATTCTATTATTTCAATATGAAAATAACTTTTTTGAAGCTAGTACAGAAACTATCAGGTCTGCTTACTCAAATCTTTCTCCTTTTCTTTtCTTTTTGTCTCAAGAAGTTTAGCATCTGGTCTAGTATGATGAGCCTTATAGAGTTAAAGCTGCAACACATTTCCTTGCATTAATGCAGTGCTTTGTTTTGGAAGAATCGGAAACGGTTCTTACAGGAAAACTACAATTTGAAACCTCTGTATGGCTATGAATTAAAATTTTCTACTTGCATATGAAATAATACCCTTCTATCTCCCTTCGACACGTACTTGTAGTTAAGTGATGTCAGTTTAAGCCAAGGGCTCAGACCTTTTAATTTTTGGTTGCAAATCTATTTTTACTAACAAAATTAAAAAGGGATAAACTTTTTTtGGAGTAGTATACACAATCAAGCTAAAGAACATGACCATTATGGGTTGGTCTAGTGGTAAAAAGGAGATATTGTATCAATATCTAACTAACAGGTCATGGGTTCAATTCGTGGTGGCCACCTATCTAGGAATTAATTTCCTACGAGTTTCCTTGACACCCAAACGTTGTAGGGTCAGACGAGTTGTTCCGTGAGATTAGTTGAGGTGTGTGTAAGTTGGCCCGAATACTCACGAATATAAAAAAAAAaTTCAAGCTAAAGAACGTGCTCAGTCCATTAAGTTAAGAAAATGTTTCAAAAGGATGAGAGTAGTTTTTTTTTTTtGCTGACAAACGTTTTCCCTAACGTGTCCACATTCAAAATATGATTGTAGGTACTAGTTCGTGGGGAGAAAGAAGTGGGACCCGGTGAACCATTTGATCAAATCTGTAATGTGAGCTTACCAAGAAGTCTGGATCCCCATTCTGTTGAACCATATGAGCTTTCAGCTTCTTTGGGGTATCTTCTTCTTTGTCTGAACTATGATGGTTGGGTTTTGAATATTTGTGGTTTATCTGTACACAACACAGATTTTGTAAGATTATGCTGCCTTGGATTCATTTTATTCTTCCTGTTGGGAATGTGCTGTCTCATTTTCTGTACTCCTTACTCCCAAGTGTTATTGATGAGGGCTTCTTCCTGCATTTTTTtATAATCCAATGTTTTTTtCTCATTTAATTGACGTCTCCTTGATTTAATTGGCAGATATATGGTGCAACTTCTAAATCTTGTTGTTCAATATTTGGCTGCACCTGCTCTTCACACCTCGGGTTTTGCAGTATGTACAGTTCTTAAAAATTTCTATCCTACGATGGCTTGGTTAAAATATTTGACAAAAAAaGAAAGTTGTTGCTTATCAAAGTCACTGAAAATTATTTTATAATTATTTTGTTTTCTAATTATGGAGATGGTTAAAGTTGTGGATTTTATCGATAATCTTGATGGTTTAATTGAACATACAGTGTTGTGGAAAGGATAACTGATAATAATGGCTACAAAACTCCTTTTTGTGTCCCAGAAGATGTAAGGGGTTTAGTAAATTTACGTTGTATGAGATGAAAGGATTTCATCTATAAGTCATTCAAATTTAAATTAATATTTTTTCAGTTTTCATTCTTAGTTGTTATTTTCGGCACATCTTCTTTTAGTAATTTGTTCATTCACCTATGCACATATTGTAGGGTTCTTGTTCACGCATATGGCAAAGGGATTCATATTGGAATGCTTGCCCATCTTCTCGAAGGTAAGTTGATTGAATTTGTAACCTGCATTCCAAAGTCTTATTTGTAACTTTTGGACTGAAAGCAATGAATTTTACAGCAATGAGTATCCAGTCTTTATGCCACGTCAAAGTTATTGTTCAACAAGCGGGGAGAATTCATGGTCTGATAAAAGCTCTAGTAACTTTGGGGTTGCTTCGTTGGAATCAGAGAGGAAACCACAATTAAGTTCACTTGAAAATAGAAGTTTCAATTACTCCTCCGCTTCTCCACATTCTATTGAATCGCACAAGGATTTGCAGAAAGGGATTGCCCTCCTAAAGAAAAGTGTAGCATGTGTTACTGCATATGGCTATAACTCCCTTTCTTTAGACGTTCCGTCTGAAGCTTCAACTTTTGAAGCATTTGCTAAATTATTGGCTACTCTTTCTTCGTCAAAGGAAGTGCGTTCTGTTTTTTCCCTCAAAATGGCTTCTTCCAGGTATTTTCATCAAAATTTCACTTTTGGGGTTTTTtCTGACTTTTAAACTTGCTTGCTTCACTAAGTTTTATTTGTCATACAAGAAATGTAGTCATACGGCCTAACCTGTCTGATACACTTGGTTATATCTTCTGCACTCAAGGTCCACCAAGCACATTCAGAAACCGATCAAATCAACGTGGAATGTGAATTCCATCGCATCCAGCATGCTGTTCGAGAGTGGACATTCACAAATAATGGTATGAATTTGCAACTTGACGTTGAATTTTGTATGTTGCATCAATTAGTTATTTAGGTTCTCCCcCCTATCATCTGTTAAAAAaTTTAGTTATTTTAAATAAATGAATACAATCATAACTTTCTGTCTCCCTACCATTACCCTCATTTAGATTGTATACTTTGAAGTTCGTTAGTTATCATCACAATAAATCCGTCATATTAAAATCAACTGGAAATGCATGCAGATTTCTCCGGTTATTTCTTCTATATTTTCTTGTCTCTTCTTCTCTGGTTATTTCATATTCCTCTTCCCTTGTTATTTTCCAAATTGTTAAATTAATGACACTCCATATATTTAAAATAGAGAGAATGGATAATCTTGAGAGTACTGTCTGCATATCTGCGGCACTTGGTTTTGTTATTATTTTTTTTTttCATTATACATATATTTTTTTTTtGCGTATGAATGCAGAAAACCAATTATGAGAGTAACCTTCCAAGTTCTGCTTCGAGTTATCTTTATGCCACTGAGTTCTCTGATACTGGAAAGAATGATTCCTCTATTGAAGGATGGGACCTCGTAGAGCATCCAACTTTTCCTCCTCCACCTTCCCAAGCCGAAGACATCGAGCATTGGACTCGAGCAATGATCATTGATGCCACCAAACAGTAATTTAATGGGTAACTAAACTAACACTCTTTTCTACTTTTTGTTTTTTTTtAAAGCTGCCACCAAAATCAAAAACACCTAATATTACTTATCTCATGCTGTTTGTTTCTCTTGTACATGCTTTAAATTTTCCTTCTCCAATGCTGTTTCTACTTTGTAGGTTATGTTTTCAAAAATACCCATCTACACGTACAAACACAAGAAAGATTAATCAATCAGTTGTAAATTTCCGAGTTTTGAAGATATATTAGCATATATATATCCTCAGATCGAATATGTCTTGATTTTAGTAGCCTTGCAGTTCAACGTGGATGCAAAAGAAAAaTATTTACGTGCATCTGAGTTTGTGTACCCCACTAGATTGTCCAATTATAACTTGTCACATGATAAACTCTTTTTATTTTATTTTATTTTtAATTTTtGTTGTGAATGGAGGAGAACGCATAAAGATGTGTGCATCTTAGTATTACCCGCTCATTAACCCCTTTGTAATATCATCATTTTTGGACTACTAAATGCATATTTATTTCCCTCTTCTTTTCCGTTTGGTATCACATCAGGTTCATGAAGATAGCGCGAGAAAGAGAAGTAGTCGGAACTACCCAATGCTCGACCAGCTTTCGACATGTAAATAATTATGGAGACTTCATAAGGTGTACATCTCTGAACATATTTAGGTTTAGGATAACTTTTATTATTCCATCATATCCGGATTTATTTAGAATTAGGATAACTTGCAGCTATTTCATCATCTTAGCC

mRNA sequence

GACTTCGAAATCCAAATTCAGATTATCGTAACCACAATCTGATTCCACCCACCAGATTCATGACTAGGAATTGATCCATGATGAATCGAAAATTCTGCAACTGCGCTATCTGTGAGAATTCAAATCAAGCTTCCATTTGCACCGGTTGCGTCAATCTCAGATTGAATGACTACAATTCTTCGTTGAAATCATTGAGAGCTCGGCGAGATGTGTTGTATTCGAGGTTGAGTGATGTGCTTGTGGCAAAGGGGAAGGCAGACGACCAATTAAACTGGAGAGTGACAAGGAATGAGAAACTTACGAGCTTAAGGGAGAAACTCAGGCGCAGTAGAGAGCAACTCGAGCAAGGAAAGGCAGAGATTGAGATGAAATCCTTTGATCTCCAATTGAAATATGCAATGCTTGAATCAGCCCGTTCAGTGTTGGAAAAACAACGACTCGAACAACTGGAGAAGGCATATCCTGACCTTATTAGCACCAAGAATCTGGGACATATGGCAATCACCTCTGAACGCCTTCACAAACAATCTGTGGTCATAAAACAACTATGCAAATTGTTTCCACAACGTCGGGTACTAGTTCGTGGGGAGAAAGAAGTGGGACCCGGTGAACCATTTGATCAAATCTGTAATGTGAGCTTACCAAGAAGTCTGGATCCCCATTCTGTTGAACCATATGAGCTTTCAGCTTCTTTGGGATATATGGTGCAACTTCTAAATCTTGTTGTTCAATATTTGGCTGCACCTGCTCTTCACACCTCGGGTTTTGCAGGTTCTTGTTCACGCATATGGCAAAGGGATTCATATTGGAATGCTTGCCCATCTTCTCGAAGCAATGAGTATCCAGTCTTTATGCCACGTCAAAGTTATTGTTCAACAAGCGGGGAGAATTCATGGTCTGATAAAAGCTCTAGTAACTTTGGGGTTGCTTCGTTGGAATCAGAGAGGAAACCACAATTAAGTTCACTTGAAAATAGAAGTTTCAATTACTCCTCCGCTTCTCCACATTCTATTGAATCGCACAAGGATTTGCAGAAAGGGATTGCCCTCCTAAAGAAAAGTGTAGCATGTGTTACTGCATATGGCTATAACTCCCTTTCTTTAGACGTTCCGTCTGAAGCTTCAACTTTTGAAGCATTTGCTAAATTATTGGCTACTCTTTCTTCGTCAAAGGAAGTGCGTTCTGTTTTTTCCCTCAAAATGGCTTCTTCCAGGTCCACCAAGCACATTCAGAAACCGATCAAATCAACGTGGAATGTGAATTCCATCGCATCCAGCATGCTGTTCGAGAGTGGACATTCACAAATAATGAAAACCAATTATGAGAGTAACCTTCCAAGTTCTGCTTCGAGTTATCTTTATGCCACTGAGTTCTCTGATACTGGAAAGAATGATTCCTCTATTGAAGGATGGGACCTCGTAGAGCATCCAACTTTTCCTCCTCCACCTTCCCAAGCCGAAGACATCGAGCATTGGACTCGAGCAATGATCATTGATGCCACCAAACAGTAATTTAATGGGTTCATGAAGATAGCGCGAGAAAGAGAAGTAGTCGGAACTACCCAATGCTCGACCAGCTTTCGACATGTAAATAATTATGGAGACTTCATAAGGTGTACATCTCTGAACATATTTAGGTTTAGGATAACTTTTATTATTCCATCATATCCGGATTTATTTAGAATTAGGATAACTTGCAGCTATTTCATCATCTTAGCC

Coding sequence (CDS)

ATGATGAATCGAAAATTCTGCAACTGCGCTATCTGTGAGAATTCAAATCAAGCTTCCATTTGCACCGGTTGCGTCAATCTCAGATTGAATGACTACAATTCTTCGTTGAAATCATTGAGAGCTCGGCGAGATGTGTTGTATTCGAGGTTGAGTGATGTGCTTGTGGCAAAGGGGAAGGCAGACGACCAATTAAACTGGAGAGTGACAAGGAATGAGAAACTTACGAGCTTAAGGGAGAAACTCAGGCGCAGTAGAGAGCAACTCGAGCAAGGAAAGGCAGAGATTGAGATGAAATCCTTTGATCTCCAATTGAAATATGCAATGCTTGAATCAGCCCGTTCAGTGTTGGAAAAACAACGACTCGAACAACTGGAGAAGGCATATCCTGACCTTATTAGCACCAAGAATCTGGGACATATGGCAATCACCTCTGAACGCCTTCACAAACAATCTGTGGTCATAAAACAACTATGCAAATTGTTTCCACAACGTCGGGTACTAGTTCGTGGGGAGAAAGAAGTGGGACCCGGTGAACCATTTGATCAAATCTGTAATGTGAGCTTACCAAGAAGTCTGGATCCCCATTCTGTTGAACCATATGAGCTTTCAGCTTCTTTGGGATATATGGTGCAACTTCTAAATCTTGTTGTTCAATATTTGGCTGCACCTGCTCTTCACACCTCGGGTTTTGCAGGTTCTTGTTCACGCATATGGCAAAGGGATTCATATTGGAATGCTTGCCCATCTTCTCGAAGCAATGAGTATCCAGTCTTTATGCCACGTCAAAGTTATTGTTCAACAAGCGGGGAGAATTCATGGTCTGATAAAAGCTCTAGTAACTTTGGGGTTGCTTCGTTGGAATCAGAGAGGAAACCACAATTAAGTTCACTTGAAAATAGAAGTTTCAATTACTCCTCCGCTTCTCCACATTCTATTGAATCGCACAAGGATTTGCAGAAAGGGATTGCCCTCCTAAAGAAAAGTGTAGCATGTGTTACTGCATATGGCTATAACTCCCTTTCTTTAGACGTTCCGTCTGAAGCTTCAACTTTTGAAGCATTTGCTAAATTATTGGCTACTCTTTCTTCGTCAAAGGAAGTGCGTTCTGTTTTTTCCCTCAAAATGGCTTCTTCCAGGTCCACCAAGCACATTCAGAAACCGATCAAATCAACGTGGAATGTGAATTCCATCGCATCCAGCATGCTGTTCGAGAGTGGACATTCACAAATAATGAAAACCAATTATGAGAGTAACCTTCCAAGTTCTGCTTCGAGTTATCTTTATGCCACTGAGTTCTCTGATACTGGAAAGAATGATTCCTCTATTGAAGGATGGGACCTCGTAGAGCATCCAACTTTTCCTCCTCCACCTTCCCAAGCCGAAGACATCGAGCATTGGACTCGAGCAATGATCATTGATGCCACCAAACAGTAA

Protein sequence

MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKADDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQRLEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPFDQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRDSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENRSFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLPSSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ*

Homology

[Close]

BLAST of Cucsa.088230 vs. TrEMBL
Match: A0A0A0LQP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403670 PE=4 SV=1)

HSP 1 Score: 948.7 bits (2451), Expect = 2.7e-273
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1


Query: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60
           MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA
Sbjct: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60

Query: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120
           DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR
Sbjct: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120

Query: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180
           LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF
Sbjct: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180

Query: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240
           DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR
Sbjct: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240

Query: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300
           DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR
Sbjct: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300

Query: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360
           SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT
Sbjct: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360

Query: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP 420
           LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP
Sbjct: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP 420

Query: 421 SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ
Sbjct: 421 SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 477

[Close]

BLAST of Cucsa.088230 vs. TrEMBL
Match: A0A067L031_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06357 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 1.3e-203
Identity = 356/478 (74.48%), Postives = 412/478 (86.19%), Query Frame = 1


Query: 2   MNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKAD 61
           MN+K   CAICENSN+ASIC  CVN RLN+YN  LKSL++RRD LYSRLS+VLVAKGKAD
Sbjct: 1   MNKKSSCCAICENSNRASICAVCVNYRLNEYNVLLKSLKSRRDFLYSRLSEVLVAKGKAD 60

Query: 62  DQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQRL 121
           DQLNWRV +NEKL SLREKLRRS+EQL QGKA++E  S DL +KY +LESA S LEK R+
Sbjct: 61  DQLNWRVLQNEKLASLREKLRRSKEQLIQGKAKVERMSNDLNVKYGVLESAHSALEKNRV 120

Query: 122 EQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPFD 181
           EQ+EK +P+LI T++LGHMAITSE LHKQSV++KQ+CKLFPQRR+++ GE++ G    +D
Sbjct: 121 EQIEKFFPNLICTQSLGHMAITSELLHKQSVIVKQMCKLFPQRRLIIEGERKDGSNGQYD 180

Query: 182 QICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRD 241
           QICN  LPR LDPHSV   EL+ASLGYMVQLLNLVV  LA PALH SGFAGSCSRIWQRD
Sbjct: 181 QICNARLPRGLDPHSVPSEELAASLGYMVQLLNLVVHNLAVPALHNSGFAGSCSRIWQRD 240

Query: 242 SYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENRS 301
           SYWNACPSSRSNEYP+F+PRQ+YCS+SGENSW+D+SSSNFGVAS+ESER+ +L S  + S
Sbjct: 241 SYWNACPSSRSNEYPLFIPRQNYCSSSGENSWTDRSSSNFGVASMESERRARLDSSRSSS 300

Query: 302 FNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLATL 361
           F+YSSASPHS+E+HKDLQKGI+LLKKSVACVTAYGYN L LDVPSEASTFEAFAKLLATL
Sbjct: 301 FSYSSASPHSVETHKDLQKGISLLKKSVACVTAYGYNLLCLDVPSEASTFEAFAKLLATL 360

Query: 362 SSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNS-IASSMLFESGHS-QIMKTNYESNL 421
           SSSKEVRSVFSLKMA SRS K +QK  KS WNVNS I+SS L ES H+  + K   ++NL
Sbjct: 361 SSSKEVRSVFSLKMACSRSCKQVQKLNKSVWNVNSTISSSTLLESAHALHLTKNISDNNL 420

Query: 422 PSSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           P+SA+S+LYATE SD G+N+S I+GWDLVEHPTFPPPPSQAEDIEHWTRAM IDAT++
Sbjct: 421 PNSATSFLYATEISDAGRNESLIDGWDLVEHPTFPPPPSQAEDIEHWTRAMFIDATRK 478

[Close]

BLAST of Cucsa.088230 vs. TrEMBL
Match: A0A067GM93_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011723mg PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 3.3e-199
Identity = 350/478 (73.22%), Postives = 408/478 (85.36%), Query Frame = 1


Query: 2   MNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKAD 61
           MN+K  NCAICENSN+ASIC  CVN RL++ N+ LKSL++RRD LY RLS+VLVAKGKAD
Sbjct: 1   MNKKASNCAICENSNRASICAACVNYRLSECNTLLKSLKSRRDALYMRLSEVLVAKGKAD 60

Query: 62  DQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQRL 121
           DQLNWRV +NEKLT+LREKLRRS+EQL QGK +IE  S+DL+++YA+L+SARS++EK R 
Sbjct: 61  DQLNWRVLQNEKLTNLREKLRRSKEQLSQGKLKIEKSSYDLKVRYAILDSARSMMEKNRA 120

Query: 122 EQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPFD 181
           EQLEK YP++I T++LGHMAI SE LHKQSVVIKQ+CKLFPQRRV + GE+  G    +D
Sbjct: 121 EQLEKFYPNIICTQSLGHMAIVSELLHKQSVVIKQICKLFPQRRVNIDGERRDGSSGQYD 180

Query: 182 QICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRD 241
           QIC   LP+ LDPHSV   EL+ASLGYMVQLLNLVV  LA P LH SGFAGSCSRIWQRD
Sbjct: 181 QICGARLPKGLDPHSVPSEELAASLGYMVQLLNLVVLNLAVPVLHNSGFAGSCSRIWQRD 240

Query: 242 SYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENRS 301
           SYW+A PSSRSNEYP+F+PRQ+YCSTSGENSW+D+SSSNFGVAS+ESER+PQL S  + S
Sbjct: 241 SYWDARPSSRSNEYPLFIPRQNYCSTSGENSWTDRSSSNFGVASMESERRPQLDSSRSAS 300

Query: 302 FNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLATL 361
           FNY+SAS HS+E+HKDLQKGI+LLKKSVAC+TAY YNSL LDVP+EASTFEAFAKLLATL
Sbjct: 301 FNYTSASTHSVETHKDLQKGISLLKKSVACLTAYCYNSLCLDVPAEASTFEAFAKLLATL 360

Query: 362 SSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNS-IASSMLFESGHS-QIMKTNYESNL 421
           S SKEVRSVFSLKMA SRS K +QK  +S WN+NS I+S+ L ES H   I K   ++NL
Sbjct: 361 SLSKEVRSVFSLKMACSRSCKQVQKLNRSVWNMNSAISSTTLLESAHMFPITKNLSDNNL 420

Query: 422 PSSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           PSSA+S+LYATE SD GKN+S I+GWDLVEHPTFPPPPSQ ED+EHWTRAMIIDATK+
Sbjct: 421 PSSAASFLYATEMSDIGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMIIDATKK 478

[Close]

BLAST of Cucsa.088230 vs. TrEMBL
Match: V4T2F6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001001mg PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 1.3e-198
Identity = 350/478 (73.22%), Postives = 407/478 (85.15%), Query Frame = 1


Query: 2   MNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKAD 61
           MN+K  NCAICENSN+ASIC  CVN RL++ N+ LKSL++RRD LY RLS+VLVAKGKAD
Sbjct: 1   MNKKASNCAICENSNRASICAACVNYRLSECNTLLKSLKSRRDALYMRLSEVLVAKGKAD 60

Query: 62  DQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQRL 121
           DQLNWRV +NEKLT+LREKLRRS+EQL QGK +IE  S+DL+ +YA+L+SARS++EK R 
Sbjct: 61  DQLNWRVLQNEKLTNLREKLRRSKEQLSQGKLKIEKSSYDLKGRYAILDSARSMMEKNRA 120

Query: 122 EQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPFD 181
           EQLEK YP++I T++LGHMAI SE LHKQSVVIKQ+CKLFPQRRV + GE+  G    +D
Sbjct: 121 EQLEKFYPNIICTQSLGHMAIVSELLHKQSVVIKQICKLFPQRRVNIDGERRDGSSGQYD 180

Query: 182 QICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRD 241
           QIC   LP+ LDPHSV   EL+ASLGYMVQLLNLVV  LA P LH SGFAGSCSRIWQRD
Sbjct: 181 QICGARLPKGLDPHSVPSEELAASLGYMVQLLNLVVLNLAVPVLHNSGFAGSCSRIWQRD 240

Query: 242 SYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENRS 301
           SYW+A PSSRSNEYP+F+PRQ+YCSTSGENSW+D+SSSNFGVAS+ESER+PQL S  + S
Sbjct: 241 SYWDARPSSRSNEYPLFIPRQNYCSTSGENSWTDRSSSNFGVASMESERRPQLDSSRSAS 300

Query: 302 FNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLATL 361
           FNY+SAS HS+E+HKDLQKGI+LLKKSVAC+TAY YNSL LDVP+EASTFEAFAKLLATL
Sbjct: 301 FNYTSASTHSVETHKDLQKGISLLKKSVACLTAYCYNSLCLDVPAEASTFEAFAKLLATL 360

Query: 362 SSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNS-IASSMLFESGHS-QIMKTNYESNL 421
           S SKEVRSVFSLKMA SRS K +QK  +S WN+NS I+S+ L ES H   I K   ++NL
Sbjct: 361 SLSKEVRSVFSLKMACSRSCKQVQKLNRSVWNMNSAISSTTLLESAHMFPITKNLSDNNL 420

Query: 422 PSSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           PSSA+S+LYATE SD GKN+S I+GWDLVEHPTFPPPPSQ ED+EHWTRAMIIDATK+
Sbjct: 421 PSSAASFLYATEMSDIGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMIIDATKK 478

[Close]

BLAST of Cucsa.088230 vs. TrEMBL
Match: M5XYK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005050mg PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 4.8e-198
Identity = 352/479 (73.49%), Postives = 406/479 (84.76%), Query Frame = 1


Query: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60
           MMNRK  NCAICE+SN AS+C  CVN RL +YNSSLK+L++RRD LYSRL++ LVAKGKA
Sbjct: 1   MMNRKSSNCAICESSNLASVCAICVNYRLTEYNSSLKALKSRRDSLYSRLTEALVAKGKA 60

Query: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120
           DDQLNWRV +NEKL  LREKLR ++EQL QGKA+IE  S+DL++K  +LESA +VLEK R
Sbjct: 61  DDQLNWRVLQNEKLVRLREKLRCNKEQLVQGKAKIEKTSYDLKVKSGVLESALAVLEKNR 120

Query: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180
            EQLEK YP+ I T+NLGHMAITSERLHKQSVVIKQ+CKLFPQRRV V  +++   G  +
Sbjct: 121 AEQLEKFYPNFICTQNLGHMAITSERLHKQSVVIKQICKLFPQRRVTVDAKRKDASGGQY 180

Query: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240
           DQICN  LPR LDPHSV   EL+ASLGYMVQLLNLVVQ LAAPALH SGFAGSCSRIWQR
Sbjct: 181 DQICNACLPRGLDPHSVPSEELAASLGYMVQLLNLVVQNLAAPALHNSGFAGSCSRIWQR 240

Query: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300
           DSYW+A PSSRSNEYP+F+PRQ+YCSTSGENSWSD+SSSNFGVAS++SERKP L S  + 
Sbjct: 241 DSYWDARPSSRSNEYPLFIPRQNYCSTSGENSWSDRSSSNFGVASIDSERKPHLDSSGSS 300

Query: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360
           SFNY+SAS HS+E+HKDLQ+GI+LLKKSVAC+TAY YNSL LDVPSEASTFEAFAKLLAT
Sbjct: 301 SFNYTSASQHSVETHKDLQRGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLAT 360

Query: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNS-IASSMLFESGHSQIMKTN-YESN 420
           LSSSKEV SVFSLKMA SRS K +Q+  KS WNVNS I+S+ L +S H+  M  N YE N
Sbjct: 361 LSSSKEVHSVFSLKMACSRSCKQVQQLNKSVWNVNSAISSTTLLDSAHAMTMTKNLYEYN 420

Query: 421 LPSSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           LP+ A+S L +TE SD+GKN+S +EGWDLVEHPTFPPPPSQ+EDIEHWTRAM IDA ++
Sbjct: 421 LPTYATSSLCSTELSDSGKNESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFIDAKRK 479

[Close]

BLAST of Cucsa.088230 vs. TAIR10
Match: AT4G08540.1 (AT4G08540.1 DNA-directed RNA polymerase II protein)

HSP 1 Score: 618.6 bits (1594), Expect = 3.2e-177
Identity = 314/477 (65.83%), Postives = 382/477 (80.08%), Query Frame = 1


Query: 2   MNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKAD 61
           M ++  NCAIC+N+N+  ICT CVN RL +YN+ LKSL+ RRD L SR +++L +KGKAD
Sbjct: 1   MTKRSSNCAICDNTNRPCICTACVNHRLIEYNTLLKSLKTRRDSLLSRFNELLESKGKAD 60

Query: 62  DQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQRL 121
           DQ NWR+ +NEK++ L++KL+ ++E + QGK +IE  S DL++KY +L+SARS LEK R+
Sbjct: 61  DQKNWRLIQNEKISKLKKKLKSNKELVTQGKVKIERGSSDLKVKYGVLDSARSTLEKTRV 120

Query: 122 EQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPFD 181
           EQ+EK +P+LI T++LGHMAI+SERLHKQSVV+KQ+CKLFP RRV   GE + G    +D
Sbjct: 121 EQVEKYFPNLICTQSLGHMAISSERLHKQSVVVKQICKLFPLRRVSFDGESQNGSVRQYD 180

Query: 182 QICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRD 241
            ICN  LP  LDPHS+   EL+ SLGYMVQLLNLVV  LAAPALH+SGFAGSCSRIWQRD
Sbjct: 181 VICNSRLPSGLDPHSIPSEELAVSLGYMVQLLNLVVHNLAAPALHSSGFAGSCSRIWQRD 240

Query: 242 SYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERK-PQLSSLENR 301
           SYW+   S+RSNEYP+F+PR++YCSTS ENSW+DK+SSNFGVAS+ES+RK P+L S  + 
Sbjct: 241 SYWDGRTSTRSNEYPLFIPRRNYCSTSVENSWTDKNSSNFGVASMESDRKEPRLDSPGSN 300

Query: 302 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 361
           SF YSSASPHSIESH+DLQKGIALLKKSVAC+TAY YNSL L+VP EASTFEAFAKLLAT
Sbjct: 301 SFKYSSASPHSIESHRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLLAT 360

Query: 362 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP 421
           LSSSKEVRSVFSLKMASSRS K  Q+  KS WN +S+ SS L ES H     T+Y  + P
Sbjct: 361 LSSSKEVRSVFSLKMASSRSGKQAQQLNKSIWNAHSVISSSLLESAHLP-RNTSYNQD-P 420

Query: 422 SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           +S +SYL ATE S    ND  + GWDLVEHP +PPPPSQ+ED+EHWTRAM IDA K+
Sbjct: 421 NSPASYLSATELSTRKNND--MNGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKKK 473

[Close]

BLAST of Cucsa.088230 vs. TAIR10
Match: AT1G77890.1 (AT1G77890.1 DNA-directed RNA polymerase II protein)

HSP 1 Score: 416.4 bits (1069), Expect = 2.4e-116
Identity = 228/450 (50.67%), Postives = 301/450 (66.89%), Query Frame = 1


Query: 5   KFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKADDQL 64
           K   CA+C  S + SIC  CVN  LN+Y   L SL++ R+V Y RLS +LV K KA  Q 
Sbjct: 3   KSTKCAVCYKSFRPSICVDCVNRGLNEYKVKLDSLKSLREVSYFRLSGLLVTKEKAISQR 62

Query: 65  NWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQRLEQL 124
            W+  +NEKL  LREKL+   E+L+Q K      S +L+ +Y ++ES    LE+ R+ QL
Sbjct: 63  CWKELQNEKLAKLREKLQLQVEKLQQSKNTFRSLSRNLKERYGIIESTNVALEESRVHQL 122

Query: 125 EKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPFDQIC 184
           E  Y D I    L ++ +TSERL+KQ++V+KQ+CKLFP  RV V G+ + G    +DQIC
Sbjct: 123 ENHYSDTIGNHYLVYIDLTSERLYKQALVMKQICKLFPLSRVTVEGQNKDGSSVQYDQIC 182

Query: 185 NVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRDSYW 244
           N  LP+ L+P SV P EL+ASLGYMVQLLNLVV  L+ PALH  GFAGSCSRIW+RDSYW
Sbjct: 183 NALLPQGLNPLSVPPKELAASLGYMVQLLNLVVHKLSVPALHNLGFAGSCSRIWERDSYW 242

Query: 245 NACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESER--KPQLSSLENRSF 304
           N+ PSS SN YP+F+P   + S   ++SW+ + ++NFGV SL+S+   +     L+    
Sbjct: 243 NSYPSSPSNGYPLFVPIHDHYSFEEKSSWTGRDTTNFGVTSLKSDGSIEEDYHDLDLDVV 302

Query: 305 NYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLATLS 364
           + SSASPHS+E+ ++LQ+GIA LK+SVA +T YGY SLSL+VPS  STFE FAKLLATLS
Sbjct: 303 SLSSASPHSVETFRNLQQGIAHLKQSVAHLTVYGYRSLSLEVPSGTSTFETFAKLLATLS 362

Query: 365 SSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYE-SNLPS 424
           S KEV+S  SL ++SS   +H  +P KS WN+NS +SS L  S H+Q    N    N+P+
Sbjct: 363 SLKEVQSGLSLGLSSSNKQRH--EPNKSVWNLNSSSSSTLLNSSHTQPTTWNSSYYNVPN 422

Query: 425 SASSYLYATEFSDTGKNDSSIEGWDLVEHP 452
              SY+   EF D  K+ +SI  W+LVE+P
Sbjct: 423 RDPSYM--VEFPDVKKDKNSIGEWNLVEYP 448

[Close]

BLAST of Cucsa.088230 vs. NCBI nr
Match: gi|778673030|ref|XP_004138644.2| (PREDICTED: uncharacterized protein LOC101217421 [Cucumis sativus])

HSP 1 Score: 948.7 bits (2451), Expect = 3.8e-273
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1


Query: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60
           MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA
Sbjct: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60

Query: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120
           DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR
Sbjct: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120

Query: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180
           LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF
Sbjct: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180

Query: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240
           DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR
Sbjct: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240

Query: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300
           DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR
Sbjct: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300

Query: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360
           SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT
Sbjct: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360

Query: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP 420
           LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP
Sbjct: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP 420

Query: 421 SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ
Sbjct: 421 SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 477

[Close]

BLAST of Cucsa.088230 vs. NCBI nr
Match: gi|659081262|ref|XP_008441239.1| (PREDICTED: uncharacterized protein DDB_G0271670 isoform X1 [Cucumis melo])

HSP 1 Score: 929.5 bits (2401), Expect = 2.4e-267
Identity = 464/477 (97.27%), Postives = 471/477 (98.74%), Query Frame = 1


Query: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60
           MMNRKFCNCAICENSNQASICTGCVNLRLNDYN+SLKSLRARRD+LYSRLSDVLVAKGKA
Sbjct: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNASLKSLRARRDILYSRLSDVLVAKGKA 60

Query: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120
           DDQLNWRVTRNEKLT LREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR
Sbjct: 61  DDQLNWRVTRNEKLTRLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120

Query: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180
           +EQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRG+KEVGPGEPF
Sbjct: 121 VEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGDKEVGPGEPF 180

Query: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240
           DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALH SGFAGSCSRIWQR
Sbjct: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHNSGFAGSCSRIWQR 240

Query: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300
           DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKP LSSLENR
Sbjct: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPHLSSLENR 300

Query: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360
           SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT
Sbjct: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360

Query: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP 420
           LSSSKEVRSVFSLKM SSRSTKHIQKPIKSTWNVNSI+SSMLFESGHSQIMKTNYESNLP
Sbjct: 361 LSSSKEVRSVFSLKMNSSRSTKHIQKPIKSTWNVNSISSSMLFESGHSQIMKTNYESNLP 420

Query: 421 SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           SSASSYLYATEFSD GKNDS+IEGWDLVEHPTFPPPPSQAEDIEHWTRAM IDATK+
Sbjct: 421 SSASSYLYATEFSDAGKNDSTIEGWDLVEHPTFPPPPSQAEDIEHWTRAMFIDATKR 477

[Close]

BLAST of Cucsa.088230 vs. NCBI nr
Match: gi|659081264|ref|XP_008441240.1| (PREDICTED: uncharacterized protein DDB_G0271670 isoform X2 [Cucumis melo])

HSP 1 Score: 929.5 bits (2401), Expect = 2.4e-267
Identity = 464/477 (97.27%), Postives = 471/477 (98.74%), Query Frame = 1


Query: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60
           MMNRKFCNCAICENSNQASICTGCVNLRLNDYN+SLKSLRARRD+LYSRLSDVLVAKGKA
Sbjct: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNASLKSLRARRDILYSRLSDVLVAKGKA 60

Query: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120
           DDQLNWRVTRNEKLT LREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR
Sbjct: 61  DDQLNWRVTRNEKLTRLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120

Query: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180
           +EQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRG+KEVGPGEPF
Sbjct: 121 VEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGDKEVGPGEPF 180

Query: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240
           DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALH SGFAGSCSRIWQR
Sbjct: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHNSGFAGSCSRIWQR 240

Query: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300
           DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKP LSSLENR
Sbjct: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPHLSSLENR 300

Query: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360
           SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT
Sbjct: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360

Query: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNSIASSMLFESGHSQIMKTNYESNLP 420
           LSSSKEVRSVFSLKM SSRSTKHIQKPIKSTWNVNSI+SSMLFESGHSQIMKTNYESNLP
Sbjct: 361 LSSSKEVRSVFSLKMNSSRSTKHIQKPIKSTWNVNSISSSMLFESGHSQIMKTNYESNLP 420

Query: 421 SSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           SSASSYLYATEFSD GKNDS+IEGWDLVEHPTFPPPPSQAEDIEHWTRAM IDATK+
Sbjct: 421 SSASSYLYATEFSDAGKNDSTIEGWDLVEHPTFPPPPSQAEDIEHWTRAMFIDATKR 477

[Close]

BLAST of Cucsa.088230 vs. NCBI nr
Match: gi|802599810|ref|XP_012072607.1| (PREDICTED: uncharacterized protein LOC105634369 isoform X1 [Jatropha curcas])

HSP 1 Score: 717.2 bits (1850), Expect = 1.9e-203
Identity = 356/478 (74.48%), Postives = 412/478 (86.19%), Query Frame = 1


Query: 2   MNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKAD 61
           MN+K   CAICENSN+ASIC  CVN RLN+YN  LKSL++RRD LYSRLS+VLVAKGKAD
Sbjct: 1   MNKKSSCCAICENSNRASICAVCVNYRLNEYNVLLKSLKSRRDFLYSRLSEVLVAKGKAD 60

Query: 62  DQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQRL 121
           DQLNWRV +NEKL SLREKLRRS+EQL QGKA++E  S DL +KY +LESA S LEK R+
Sbjct: 61  DQLNWRVLQNEKLASLREKLRRSKEQLIQGKAKVERMSNDLNVKYGVLESAHSALEKNRV 120

Query: 122 EQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPFD 181
           EQ+EK +P+LI T++LGHMAITSE LHKQSV++KQ+CKLFPQRR+++ GE++ G    +D
Sbjct: 121 EQIEKFFPNLICTQSLGHMAITSELLHKQSVIVKQMCKLFPQRRLIIEGERKDGSNGQYD 180

Query: 182 QICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQRD 241
           QICN  LPR LDPHSV   EL+ASLGYMVQLLNLVV  LA PALH SGFAGSCSRIWQRD
Sbjct: 181 QICNARLPRGLDPHSVPSEELAASLGYMVQLLNLVVHNLAVPALHNSGFAGSCSRIWQRD 240

Query: 242 SYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENRS 301
           SYWNACPSSRSNEYP+F+PRQ+YCS+SGENSW+D+SSSNFGVAS+ESER+ +L S  + S
Sbjct: 241 SYWNACPSSRSNEYPLFIPRQNYCSSSGENSWTDRSSSNFGVASMESERRARLDSSRSSS 300

Query: 302 FNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLATL 361
           F+YSSASPHS+E+HKDLQKGI+LLKKSVACVTAYGYN L LDVPSEASTFEAFAKLLATL
Sbjct: 301 FSYSSASPHSVETHKDLQKGISLLKKSVACVTAYGYNLLCLDVPSEASTFEAFAKLLATL 360

Query: 362 SSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNS-IASSMLFESGHS-QIMKTNYESNL 421
           SSSKEVRSVFSLKMA SRS K +QK  KS WNVNS I+SS L ES H+  + K   ++NL
Sbjct: 361 SSSKEVRSVFSLKMACSRSCKQVQKLNKSVWNVNSTISSSTLLESAHALHLTKNISDNNL 420

Query: 422 PSSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           P+SA+S+LYATE SD G+N+S I+GWDLVEHPTFPPPPSQAEDIEHWTRAM IDAT++
Sbjct: 421 PNSATSFLYATEISDAGRNESLIDGWDLVEHPTFPPPPSQAEDIEHWTRAMFIDATRK 478

[Close]

BLAST of Cucsa.088230 vs. NCBI nr
Match: gi|470129520|ref|XP_004300664.1| (PREDICTED: uncharacterized protein LOC101292418 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 706.8 bits (1823), Expect = 2.5e-200
Identity = 355/479 (74.11%), Postives = 411/479 (85.80%), Query Frame = 1


Query: 1   MMNRKFCNCAICENSNQASICTGCVNLRLNDYNSSLKSLRARRDVLYSRLSDVLVAKGKA 60
           M N+K  NCAICENSN ASIC  CVN RLNDYN+SLK+L++RRD+LYSRLSD LVAKGKA
Sbjct: 1   MTNKKSSNCAICENSNLASICAVCVNYRLNDYNNSLKALKSRRDLLYSRLSDALVAKGKA 60

Query: 61  DDQLNWRVTRNEKLTSLREKLRRSREQLEQGKAEIEMKSFDLQLKYAMLESARSVLEKQR 120
           DDQLNWR+ ++EKL  LREKLRR++EQL QGKA+IE  S+DL++KY +LESA S+LEK R
Sbjct: 61  DDQLNWRILQDEKLVRLREKLRRNKEQLVQGKAKIEKTSYDLKVKYGVLESALSMLEKNR 120

Query: 121 LEQLEKAYPDLISTKNLGHMAITSERLHKQSVVIKQLCKLFPQRRVLVRGEKEVGPGEPF 180
            EQLEK YP+LI T++LGHMAITSERLHKQSVVIKQ+CKLFPQRRV V  +++ G G  +
Sbjct: 121 AEQLEKFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVTVDAKRKEGSGGQY 180

Query: 181 DQICNVSLPRSLDPHSVEPYELSASLGYMVQLLNLVVQYLAAPALHTSGFAGSCSRIWQR 240
           DQICN SLPR LDPHSV   EL+ASLGYMVQLLNLVVQ L APALH SGFAGSCSRIWQR
Sbjct: 181 DQICNASLPRGLDPHSVPSEELAASLGYMVQLLNLVVQNLGAPALHNSGFAGSCSRIWQR 240

Query: 241 DSYWNACPSSRSNEYPVFMPRQSYCSTSGENSWSDKSSSNFGVASLESERKPQLSSLENR 300
           DSYW+A PSSRSNEYP+F+PRQ+YCSTSGENSWSD+SSSNFGVAS+ESERKP+L S  + 
Sbjct: 241 DSYWDARPSSRSNEYPLFIPRQNYCSTSGENSWSDRSSSNFGVASIESERKPRLDSSGSS 300

Query: 301 SFNYSSASPHSIESHKDLQKGIALLKKSVACVTAYGYNSLSLDVPSEASTFEAFAKLLAT 360
           SFNYSSAS HS+E+HKDLQ+GI+LLKKSVAC+TAY YNSL LDVPSEASTFEAFAKLL+T
Sbjct: 301 SFNYSSASQHSVETHKDLQRGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLST 360

Query: 361 LSSSKEVRSVFSLKMASSRSTKHIQKPIKSTWNVNS-IASSMLFESGHSQIMKTN-YESN 420
           LSSSKEV SVFSLKMA SRS K +Q+  KS WNVNS I+S+ L +S H+  M  N YE+N
Sbjct: 361 LSSSKEVHSVFSLKMACSRSCKQVQQLNKSVWNVNSAISSTTLLDSAHTMTMTKNFYENN 420

Query: 421 LPSSASSYLYATEFSDTGKNDSSIEGWDLVEHPTFPPPPSQAEDIEHWTRAMIIDATKQ 478
           +P+ A+S+L +TE SD GKN+ +IEGWDLVEHPT  PPPSQ+EDIEHWTRAM ID TK+
Sbjct: 421 IPNYATSFLSSTEMSDVGKNECTIEGWDLVEHPTL-PPPSQSEDIEHWTRAMFIDVTKR 478

The following BLAST results are available for this feature:

BLAST of Cucsa.088230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQP7_CUCSA	2.7e-273	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403670 PE=4 SV=1	[more]
A0A067L031_JATCU	1.3e-203	74.48	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06357 PE=4 SV=1	[more]
A0A067GM93_CITSI	3.3e-199	73.22	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011723mg PE=4 SV=1	[more]
V4T2F6_9ROSI	1.3e-198	73.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001001mg PE=4 SV=1	[more]
M5XYK5_PRUPE	4.8e-198	73.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005050mg PE=4 SV=1	[more]

BLAST of Cucsa.088230 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08540.1	3.2e-177	65.83	DNA-directed RNA polymerase II protein	[more]
AT1G77890.1	2.4e-116	50.67	DNA-directed RNA polymerase II protein	[more]

BLAST of Cucsa.088230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778673030\|ref\|XP_004138644.2\|	3.8e-273	100.00	PREDICTED: uncharacterized protein LOC101217421 [Cucumis sativus]	[more]
gi\|659081262\|ref\|XP_008441239.1\|	2.4e-267	97.27	PREDICTED: uncharacterized protein DDB_G0271670 isoform X1 [Cucumis melo]	[more]
gi\|659081264\|ref\|XP_008441240.1\|	2.4e-267	97.27	PREDICTED: uncharacterized protein DDB_G0271670 isoform X2 [Cucumis melo]	[more]
gi\|802599810\|ref\|XP_012072607.1\|	1.9e-203	74.48	PREDICTED: uncharacterized protein LOC105634369 isoform X1 [Jatropha curcas]	[more]
gi\|470129520\|ref\|XP_004300664.1\|	2.5e-200	74.11	PREDICTED: uncharacterized protein LOC101292418 isoform X1 [Fragaria vesca subsp...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018791	UV_resistance/autophagy_Atg14

Vocabulary: **Biological Process**
Term	Definition
GO:0010508	positive regulation of autophagy

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010508	positive regulation of autophagy
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003899	DNA-directed RNA polymerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.088230.1	Cucsa.088230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018791	UV radiation resistance protein/autophagy-related protein 14	PFAM	PF10186	Atg14	coord: 9..367 score: 1.3
None	No IPR available	unknown	Coil	Coil	coord: 71..98 scor
None	No IPR available	PANTHER	PTHR21297	DNA-DIRECTED RNA POLYMERASE II	coord: 3..468 score: 1.6E
None	No IPR available	PANTHER	PTHR21297:SF1	DNA-DIRECTED RNA POLYMERASE II PROTEIN	coord: 3..468 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.088230	Cla011899	Watermelon (97103) v1	cgywmB101
Cucsa.088230	Csa2G403670	Cucumber (Chinese Long) v2	cgycuB090
Cucsa.088230	MELO3C008130	Melon (DHL92) v3.5.1	cgymeB100
Cucsa.088230	ClCG11G008030	Watermelon (Charleston Gray)	cgywcgB097
Cucsa.088230	CSPI02G25050	Wild cucumber (PI 183967)	cgycpiB093
Cucsa.088230	CmaCh15G000420	Cucurbita maxima (Rimu)	cgycmaB0168
Cucsa.088230	CmaCh04G030030	Cucurbita maxima (Rimu)	cgycmaB0171
Cucsa.088230	CmoCh04G031230	Cucurbita moschata (Rifu)	cgycmoB0166
Cucsa.088230	Lsi03G004500	Bottle gourd (USVL1VR-Ls)	cgylsiB098
Cucsa.088230	Cp4.1LG13g11560	Cucurbita pepo (Zucchini)	cgycpeB0162
Cucsa.088230	Cp4.1LG01g26060	Cucurbita pepo (Zucchini)	cgycpeB0164
Cucsa.088230	MELO3C008130.2	Melon (DHL92) v3.6.1	cgymedB099
Cucsa.088230	CsaV3_2G033570	Cucumber (Chinese Long) v3	cgycucB092
Cucsa.088230	Cla97C11G215480	Watermelon (97103) v2	cgywmbB097
Cucsa.088230	Bhi04G002046	Wax gourd	cgywgoB111
Cucsa.088230	Carg06076	Silver-seed gourd	carcgyB0016
Cucsa.088230	Carg22856	Silver-seed gourd	carcgyB1196

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.088230	Cucurbita moschata (Rifu)	cgycmoB0163