Cucsa.088070 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.088070
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	50S ribosomal protein-related, putative
Location	scaffold00888 : 494041 .. 494736 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTCAATTtCTtATTCCAATTTTCtGTTTCACACAACACAAATACACACCAACGAATCTCTCAAATCTCCATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATCCATCTCCGTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGACTCTCAAGATCTCGACGACCACGACCACGACCACGACGACAACCACAATTTGATTCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGAAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGCCGCTTGAGGATAGGCTCTCCGATAGAAGAATCGAAGAACAGGAAGCATTCCTAACATCGACCAACACTAACGCCGCTGGAATCAGTTCTCCATCTACCACTCGCCGCTCTCTTAGACCTGTATCGGCGACATTCCGGTACAGATTTCTCAGGCGAGCTTGGCGGCCAGTGCTCGTTGCCATCCCCGAGTAGAAGATTCTCCTCTCCGGTAAAATCTGTACGAAGAAATTCCATAATTTTTGCCTTAATAATTATCATTATTATTATTTTTtAAAATTTTCATAACATTTTTTCCCTAATAAATTCCGACGAGTCGTCTA

mRNA sequence

TTTCCTCAATTTCTTATTCCAATTTTCTGTTTCACACAACACAAATACACACCAACGAATCTCTCAAATCTCCATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATCCATCTCCGTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGACTCTCAAGATCTCGACGACCACGACCACGACCACGACGACAACCACAATTTGATTCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGAAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGCCGCTTGAGGATAGGCTCTCCGATAGAAGAATCGAAGAACAGGAAGCATTCCTAACATCGACCAACACTAACGCCGCTGGAATCAGTTCTCCATCTACCACTCGCCGCTCTCTTAGACCTGTATCGGCGACATTCCGGTACAGATTTCTCAGGCGAGCTTGGCGGCCAGTGCTCGTTGCCATCCCCGAGTAGAAGATTCTCCTCTCCGGTAAAATCTGTACGAAGAAATTCCATAATTTTTGCCttaataattatcattattattattttttaaaattttCATAACATTTTTTCCCTAATAAATTCCGACGAGTCGTCTA

Coding sequence (CDS)

ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATCCATCTCCGTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGACTCTCAAGATCTCGACGACCACGACCACGACCACGACGACAACCACAATTTGATTCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGAAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGCCGCTTGAGGATAGGCTCTCCGATAGAAGAATCGAAGAACAGGAAGCATTCCTAACATCGACCAACACTAACGCCGCTGGAATCAGTTCTCCATCTACCACTCGCCGCTCTCTTAGACCTGTATCGGCGACATTCCGGTACAGATTTCTCAGGCGAGCTTGGCGGCCAGTGCTCGTTGCCATCCCCGAGTAG

Protein sequence

MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE*

Homology

[Close]

BLAST of Cucsa.088070 vs. TrEMBL
Match: A0A0A0LQR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404840 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 9.0e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120
           SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT
Sbjct: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120

Query: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
           STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 164

[Close]

BLAST of Cucsa.088070 vs. TrEMBL
Match: W9S8X5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027070 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.6e-37
Identity = 104/177 (58.76%), Postives = 124/177 (70.06%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATL KFKLLA+QCAVAGSPTRSP+ASP+IHL  RRRKTLRMLLNR + RR P ++ S++
Sbjct: 1   MATLQKFKLLATQCAVAGSPTRSPSASPVIHL--RRRKTLRMLLNRPE-RRLPRREASSE 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRR------IEE 120
            +D+D+   D  D+    PEK+ K+ R R+KLKDLFVSS PPLEDR+SD R       EE
Sbjct: 61  VKDIDE---DGGDDR---PEKS-KDARVRQKLKDLFVSS-PPLEDRVSDNRGEREDEEEE 120

Query: 121 QEAFLTSTNTNAAGIS---SPSTTRR----SLRPVSATFRYRFLRRAWRPVLVAIPE 165
           +   L  T +   G S      T RR    SLRPV+A FRYR LRRAWRPVLV+IPE
Sbjct: 121 ERGLLPPTGSVIGGFSVGGGGLTARRRGTGSLRPVTAGFRYRLLRRAWRPVLVSIPE 166

[Close]

BLAST of Cucsa.088070 vs. TrEMBL
Match: A0A067F7D4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032103mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.8e-34
Identity = 92/164 (56.10%), Postives = 108/164 (65.85%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATL K KLLA+QCAVAGSPTRSP ASP+IHLRRR  KTLRMLLNR   RRFP QDN   
Sbjct: 1   MATLQKVKLLATQCAVAGSPTRSPTASPVIHLRRR--KTLRMLLNR---RRFPRQDNDDL 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120
            +++ D           +PE   K++RA  KLKDLFVSSPP  E         +++  L 
Sbjct: 61  GREVADE----------LPEIKNKKIRA--KLKDLFVSSPPFEERDSESSGSGDRQGLLP 120

Query: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
            T T  +G ++   +  SLRPVSATFRYR LRRAWRP+LV IPE
Sbjct: 121 VTGTVGSGSATRRGSAGSLRPVSATFRYRLLRRAWRPMLVTIPE 147

[Close]

BLAST of Cucsa.088070 vs. TrEMBL
Match: A0A061EGK7_THECC (50S ribosomal protein-related, putative OS=Theobroma cacao GN=TCM_019384 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-32
Identity = 94/171 (54.97%), Postives = 113/171 (66.08%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNR---TDRRRF--PFQ 60
           MATLHKFKLLA+QCAVAGSP RSP  SP++HL  RRRKTLRMLLNR   T+RRRF     
Sbjct: 1   MATLHKFKLLATQCAVAGSPGRSPTTSPVVHL--RRRKTLRMLLNRSSATERRRFHRRHD 60

Query: 61  DNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRI--E 120
           DN+ D             N     +KN    ++RRKLK+LFV+S PP E+R S+ +   E
Sbjct: 61  DNNFDPPP-PPPPPPPSTNSTADSKKNSNGKKSRRKLKELFVAS-PPFEERESNNKSCEE 120

Query: 121 EQEAFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
           E E  L  T ++  G SS S+   SLRPV+A+FRYR LRRAWRP+LV IPE
Sbjct: 121 ETEDLLPVTVSSGDGFSSRSS--GSLRPVTASFRYRLLRRAWRPMLVTIPE 165

[Close]

BLAST of Cucsa.088070 vs. TrEMBL
Match: A0A067D4J1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032080mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-32
Identity = 90/164 (54.88%), Postives = 107/164 (65.24%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATL K KLLA+QCAVAGSPTRSP ASP+IHLRRR  KTLRMLLNR   RRF  QD+   
Sbjct: 1   MATLQKVKLLATQCAVAGSPTRSPTASPVIHLRRR--KTLRMLLNR---RRFTRQDDDNL 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120
            +++ D           +PE   K++RA  KLKDLFVSSPP  E         +++  L 
Sbjct: 61  DREVADE----------LPEIKNKKIRA--KLKDLFVSSPPFEERDSESSGSGDRQGLLP 120

Query: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
            T T  +G ++   +  SLRPVSATFRYR LRRAWRP+LV IPE
Sbjct: 121 VTGTVGSGSATRRGSAGSLRPVSATFRYRLLRRAWRPMLVTIPE 147

[Close]

BLAST of Cucsa.088070 vs. TAIR10
Match: AT1G66890.1 (AT1G66890.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 98.2 bits (243), Expect = 5.0e-21
Identity = 76/177 (42.94%), Postives = 96/177 (54.24%), Query Frame = 1


Query: 3   TLHKFKLLASQCA-VAGSPTRSPNASPLIHLRRRRRKTLRMLLNRT-DRRRFPFQDNSAD 62
           +L KFKLLA+ C+ VA SPTRSP    +IHLRRR  KTLR+LL R+ DR R P   N+ D
Sbjct: 2   SLQKFKLLATHCSTVAESPTRSP----VIHLRRR--KTLRLLLTRSSDRWRLPEIQNNVD 61

Query: 63  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLE-------DRLSDRRIE 122
                D                  ++R+ RKL DLFVSSPP  E       D+ +   +E
Sbjct: 62  ESKKTD---------------KRGKIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVE 121

Query: 123 EQEAFLTSTNTNAAGISSPSTTRR-----SLRPVSA-TFRYRFLRRAWRPVLVAIPE 165
            +     +  +N AG     T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Sbjct: 122 MERDVPVNGVSNNAGFGEEITARRVGFNGSVRPMSSVTLRCRLLRRSWRPVLVTIPE 157

[Close]

BLAST of Cucsa.088070 vs. TAIR10
Match: AT5G16200.1 (AT5G16200.1 50S ribosomal protein-related)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = 1


Query: 1   MATLHKFKLLAS----QCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRT-DRRRFPFQ 60
           ++ LHKFKL A+    + + AGSPT SP  SP+ +LRRR  KTLRML +++ D RR   +
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNLRRR--KTLRMLFDKSSDSRRRNLR 62

Query: 61  DNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP-PPLEDRLSDRRIEE 120
               +S + D +  +         +K       RRKL++L V+SP PP + R     I E
Sbjct: 63  QILEESPESDGNSGN---------KKRGNHRATRRKLRELLVTSPSPPYKGREDIDGIGE 122

Query: 121 QEAFLTSTNTNAAGISSPSTTRRSLRPVSA-TFRYRFLRRAWRPVLVAIPE 165
           + + ++  N  + G     T RR     S  +FR R LR+ WRPVLV+IPE
Sbjct: 123 ERSEISPLNVTSNGDGRELTARRFGSSGSVQSFRLRILRKPWRPVLVSIPE 162

[Close]

BLAST of Cucsa.088070 vs. TAIR10
Match: AT1G68430.1 (AT1G68430.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 3.5e-14
Identity = 65/169 (38.46%), Postives = 81/169 (47.93%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAG-SPTRSPN--ASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDN 60
           MATL +FK L +QC VA  SPTRSP+   SPL+ L RR++ TL+MLL+     R      
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQL-RRKKTTLKMLLSLASPSR------ 60

Query: 61  SADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRI--EEQ 120
             + Q L  H H              K+V A RKLKDLFVSS    E++  D R   + +
Sbjct: 61  -REQQPLIHHHH--------------KDV-AGRKLKDLFVSSSSAEEEQEEDERPKGKTK 120

Query: 121 EAFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
           E  L +        S          PV   F  R L+RAWRP L  I E
Sbjct: 121 EEVLAAMAAKLNAASRLQCESADAAPVWFGFSKRLLQRAWRPKLGTIHE 146

[Close]

BLAST of Cucsa.088070 vs. NCBI nr
Match: gi|449441728|ref|XP_004138634.1| (PREDICTED: uncharacterized protein LOC101215025 [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-87
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120
           SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT
Sbjct: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120

Query: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
           STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 164

[Close]

BLAST of Cucsa.088070 vs. NCBI nr
Match: gi|659081303|ref|XP_008441261.1| (PREDICTED: uncharacterized protein LOC103485443 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 2.0e-80
Identity = 156/164 (95.12%), Postives = 157/164 (95.73%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120
           SQDLDD D   DDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQE F+T
Sbjct: 61  SQDLDDDDD--DDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEEFVT 120

Query: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
           S NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 SANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 162

[Close]

BLAST of Cucsa.088070 vs. NCBI nr
Match: gi|1009126000|ref|XP_015879913.1| (PREDICTED: uncharacterized protein LOC107415973 [Ziziphus jujuba])

HSP 1 Score: 180.3 bits (456), Expect = 2.8e-42
Identity = 103/172 (59.88%), Postives = 121/172 (70.35%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATL KFKLLA+QCAVAGSPTRSP+ASP+IHL  RRRKTLRMLL+R +RRR   +D +++
Sbjct: 1   MATLQKFKLLATQCAVAGSPTRSPSASPVIHL--RRRKTLRMLLSRPERRRLSRRDTASE 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120
            +D D    D DD+    PEK  KEVR R KLKDLFVSSPPP++D+   R+ EEQ   L 
Sbjct: 61  IRDFDGEGGDGDDDDEDPPEK-RKEVRVRHKLKDLFVSSPPPIDDK-RGRQEEEQRGLLL 120

Query: 121 STN--------TNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
             N         +  G S+     RSLRPV+ATFRYRFLRRAWRPVLV IPE
Sbjct: 121 PQNGGVGGGFGGSGGGFSTRRGGVRSLRPVTATFRYRFLRRAWRPVLVTIPE 168

[Close]

BLAST of Cucsa.088070 vs. NCBI nr
Match: gi|658034223|ref|XP_008352633.1| (PREDICTED: uncharacterized protein LOC103416150 [Malus domestica])

HSP 1 Score: 165.6 bits (418), Expect = 7.2e-38
Identity = 97/172 (56.40%), Postives = 118/172 (68.60%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATL KFKLLA+QCAVAGSPTRSP+ASP+IHL  RRRKTLRM L R DRRR P Q NS++
Sbjct: 1   MATLQKFKLLATQCAVAGSPTRSPSASPVIHL--RRRKTLRMFLTRQDRRRLPRQTNSSE 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRI------EE 120
           S  +D  + + D      P+K+++  R RRKLKDLFVSS PP EDR+SDRR        E
Sbjct: 61  SPPIDGDNRNGDS-----PQKSKEVARVRRKLKDLFVSS-PPFEDRISDRRSGGIGDEGE 120

Query: 121 QEAFLTSTNT--NAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 165
               L++T +   A  I +      SLRP++A+FR R L+RAWRPVLV IPE
Sbjct: 121 GRGLLSATGSGDGAGEIPTQRGAGLSLRPITASFRNRLLKRAWRPVLVTIPE 164

[Close]

BLAST of Cucsa.088070 vs. NCBI nr
Match: gi|703146736|ref|XP_010108876.1| (hypothetical protein L484_027070 [Morus notabilis])

HSP 1 Score: 162.2 bits (409), Expect = 8.0e-37
Identity = 104/177 (58.76%), Postives = 124/177 (70.06%), Query Frame = 1


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATL KFKLLA+QCAVAGSPTRSP+ASP+IHL  RRRKTLRMLLNR + RR P ++ S++
Sbjct: 1   MATLQKFKLLATQCAVAGSPTRSPSASPVIHL--RRRKTLRMLLNRPE-RRLPRREASSE 60

Query: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRR------IEE 120
            +D+D+   D  D+    PEK+ K+ R R+KLKDLFVSS PPLEDR+SD R       EE
Sbjct: 61  VKDIDE---DGGDDR---PEKS-KDARVRQKLKDLFVSS-PPLEDRVSDNRGEREDEEEE 120

Query: 121 QEAFLTSTNTNAAGIS---SPSTTRR----SLRPVSATFRYRFLRRAWRPVLVAIPE 165
           +   L  T +   G S      T RR    SLRPV+A FRYR LRRAWRPVLV+IPE
Sbjct: 121 ERGLLPPTGSVIGGFSVGGGGLTARRRGTGSLRPVTAGFRYRLLRRAWRPVLVSIPE 166

The following BLAST results are available for this feature:

BLAST of Cucsa.088070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQR3_CUCSA	9.0e-88	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404840 PE=4 SV=1	[more]
W9S8X5_9ROSA	5.6e-37	58.76	Uncharacterized protein OS=Morus notabilis GN=L484_027070 PE=4 SV=1	[more]
A0A067F7D4_CITSI	9.8e-34	56.10	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032103mg PE=4 SV=1	[more]
A0A061EGK7_THECC	3.2e-32	54.97	50S ribosomal protein-related, putative OS=Theobroma cacao GN=TCM_019384 PE=4 SV...	[more]
A0A067D4J1_CITSI	3.2e-32	54.88	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032080mg PE=4 SV=1	[more]

BLAST of Cucsa.088070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66890.1	5.0e-21	42.94	FUNCTIONS IN: molecular_function unknown	[more]
AT5G16200.1	1.8e-18	38.01	50S ribosomal protein-related	[more]
AT1G68430.1	3.5e-14	38.46	unknown protein	[more]

BLAST of Cucsa.088070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441728\|ref\|XP_004138634.1\|	1.3e-87	100.00	PREDICTED: uncharacterized protein LOC101215025 [Cucumis sativus]	[more]
gi\|659081303\|ref\|XP_008441261.1\|	2.0e-80	95.12	PREDICTED: uncharacterized protein LOC103485443 [Cucumis melo]	[more]
gi\|1009126000\|ref\|XP_015879913.1\|	2.8e-42	59.88	PREDICTED: uncharacterized protein LOC107415973 [Ziziphus jujuba]	[more]
gi\|658034223\|ref\|XP_008352633.1\|	7.2e-38	56.40	PREDICTED: uncharacterized protein LOC103416150 [Malus domestica]	[more]
gi\|703146736\|ref\|XP_010108876.1\|	8.0e-37	58.76	hypothetical protein L484_027070 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.088070.1	Cucsa.088070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34542	FAMILY NOT NAMED	coord: 2..164 score: 7.9
None	No IPR available	PANTHER	PTHR34542:SF1	50S RIBOSOMAL PROTEIN RELATED PROTEIN	coord: 2..164 score: 7.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.088070	Cla011873	Watermelon (97103) v1	cgywmB101
Cucsa.088070	Csa2G404840	Cucumber (Chinese Long) v2	cgycuB090
Cucsa.088070	MELO3C008147	Melon (DHL92) v3.5.1	cgymeB100
Cucsa.088070	ClCG11G007810	Watermelon (Charleston Gray)	cgywcgB097
Cucsa.088070	CSPI02G25270	Wild cucumber (PI 183967)	cgycpiB093
Cucsa.088070	CmaCh15G000520	Cucurbita maxima (Rimu)	cgycmaB0168
Cucsa.088070	CmoCh04G031140	Cucurbita moschata (Rifu)	cgycmoB0166
Cucsa.088070	CmoCh15G000530	Cucurbita moschata (Rifu)	cgycmoB0163
Cucsa.088070	Lsi03G004330	Bottle gourd (USVL1VR-Ls)	cgylsiB098
Cucsa.088070	Cp4.1LG13g11330	Cucurbita pepo (Zucchini)	cgycpeB0162
Cucsa.088070	MELO3C008147.2	Melon (DHL92) v3.6.1	cgymedB099
Cucsa.088070	CsaV3_2G033780	Cucumber (Chinese Long) v3	cgycucB092
Cucsa.088070	Cla97C11G215680	Watermelon (97103) v2	cgywmbB097
Cucsa.088070	Bhi04G002026	Wax gourd	cgywgoB111
Cucsa.088070	Carg22845	Silver-seed gourd	carcgyB1196

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.088070	Silver-seed gourd	carcgyB0016
Cucsa.088070	Cucurbita maxima (Rimu)	cgycmaB0171
Cucsa.088070	Cucurbita pepo (Zucchini)	cgycpeB0164