Cucsa.079650 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAGGAAAATAGAAGAGAGGATGGACTTGGTGGAACAGCAACTTCAGAGGCTTCCAATTATGGATGAGAATTTGTCGTTGATGGCAACAAACATTAAGGAAATAAATACTCAAATTAATAAGCAGCAGCAGCAACAACAGATAATTCTGAAGTACATCGAAGGAATTATGAGTGAAAATTCGGCGGCTGGAAAGATGACAGAGGGCATGACAAGCCAAACGAAGAGCAGCGCCGTAGGGATAACCACCGTAACTGACGAATCCAAGAGGATTAAGACGTCTGAGGATGAAAAACCGATGGACCGAAGCAAATTTAAGAAAGTGGAGATGCCGATATTCAATAGAACCAATACCGATTCATGGTTATTCCGAGCAGATAGGTATATCAAAGTTCATGAACTGACTGATTCGGAGAAACTCATAGTGGCCGTTATCAGTTTTGGCGGGCCTGCCTTGGATTGGTATCATTCAAATGACGAGTAAGAAGCGTTCACGAGTTGGGAGAACATGAAATAGAGGATGTTGGTCCGATTCCAAACAATTCGAGATGGGTCGCTGGTGGGAAGATTTTTACCCATTAAGCAAGAAACAACCGTAGAAGAATACCAAAACAGGTTTGACCGACTGTTGGCCTCAATAGCTTTTCTGCAAACAGTAGTATTGGAGGAGACGTTTATGAATGGGCTTAGCCCATGATTGAAGACTGAAGTCGAGACACTGGAACTGGTGGCGTTGGCCCAGATGATGAAATAAGCACTGAAAATTAAGAAACGAGAAATGGTGAGACGAGAATGTGGACTGAGTAGTGCGTATGGAGGAAAACAACAATTCAAATTACCATTGGCAAAACACACAGCACCACCAATAACTAACGTCACACAATCGGTGGGATGTTGGCCGATGAGGACTATAACATTGAAAGGAGTCACTGCGGGGGAGAATCGACGAGAAGGCCCAACAAAGAGATTGTCTGATGCTGAGTTCCAATCACGGAGGGAGAAGGGGTTATGCTTTAGATGTGAGGAGAAATACCACGTCGGACATCGATGCAAAGCTAAAGAACAAAAGGAACTCCGAACGATAGTGGTAAAGGAGAACAGGGAGGAATTGGAGATTGTTGAGGAAGATTATTACGAAGCAGAGGCAGAATTTAAAAACACTGAAGTTGAGAACGTGAAGAATTTGAATATTGAATTGTCCCTTAATTCAGTAGTTGGGTTGACTAGCCTGGGAATAATGAAGGTGAGAGGAAAAATAAACGGAGTAGATGTGATATTCCTCATTGACTGTGGAGTGACACATAATTTCATTTCTGATAAATTAGTTAACTCACTGAATTTTCCAACCAAGGAAACATCTAATTATGGTGTGATCCTGGGTTCAGACACTGCTGTGAAGGGGAAGGGAATTTATGGGAGAGTTGATGTATTATTGGGAGAATGGAAGATCATTGACAGTTTTCTACCCTTGGAACTAGGAGGGGTTGACGTGCTTCTATGTATGCAGTGACTTCATTCCTTAGGAGTCATAGAGGTTGATTGGCAAAACCTAGTATTGTCTTTTCAGCATGAAGGAAGGAGAGTCCTAATTAAGGGTGACCTAGCTTAACCAAGAAGAGAGTTAGCTTGAAGAATATGATGAAGACATGGGAAGTGGATGATCAAGGGTTCTTGGTAGAATGTAGAGCTCTAGAAGGAAGGACAACGGTGGAGGAGTGGTATGACGAAGAAGTAGTGCCACCTGTGGAGAACACTATTTCTTCCCTGCTTAACCAATTTGAAGATATGTTTGAATAGCCGGAAAAATTTCCACCACCAAGGGAGATTGGGCATCACATTTATCTGAAGAAAAAGGAACAAATCCGGTAAACGTTCAACCATACCGGTATGCACACCACCAGAAAGAGGAAATGGAAAAGTTAGTGGATGAGATGCTGCAGTCAAGGATCATAAGACCTAGTACTAGTCCCTACTCCAGTCCTGTATTACCGGTCAAGAAGAAAGATGGGAGTTGGCATTTCTGTGTTGACTATCGAGCTTTAAATAATGTAACTATTTTGGATAAATTCCCAATTCTGGTGATAGAGGAGTTATTTGGTGAACTAAATAGGGCTAACATGTTCTCCAAGATAGATCTGAAAGCCAACTATCATCAAATAAGAATGCAACCAAGAGATATAGAGAAGACTTACCGAAATCTGCAGGATGGGAA atggctaggaaaatagaagagaggatggacttggtggaacagcaacttcagaggcttccaattatggatgagaatttgtcgttgatggcaacaaacattaaggaaataaatactcaaattaataagcagcagcagcaacaacagataattctgaagtacatcgaaggaattatgagtgaaaattcggcggctggaaagatgacagagggcatgacaagccaaacgaagagcAGCGCCGTAGGGATAACCACCGTAACTGACGAATCCAAGAGGATTAAGACGTCTGAGGATGAAAAACCGATGGACCGAagcaaatttaagaaagtggagatgccgatattcaatagaaccaataccgattcatggttattccgagcagataggtatatcaaagttcatgaactgactgattcggagaaactcatagtggccgttatcagttttggcgggcctgccttggattggtatcattcaaatgacgagatgttggtccgattccaaacaattcgagatgggtcgctggtgggaagatttttacccattaagcaagaaacaaccgtagaagaataccaaaacagtgcgtatggaggaaaacaacaattcaaattaccattggcaaaacacacagcaccaccaataactaacgtcacacaatcggtgggatgttggccgatgaggactataacattgaaaggagtcactgcgggggagaatcgacgagaaggcccaacaaagagattgtctgatgctgagttccaatcacggagggagaaggggttatgctttagatgtgaggagaaataccacgtcggacatcgatgcaaagctaaagaacaaaaggaactccgaacgatagtggtaaaggagaacagggaggaattggagattgttgaggaagattattacgaagcagaggcagaatttaaaaacactgaagttgagaacgtgaagaatttgaatattgaattgtcccttaattcagtagttgggttgactagcctgggaataatgaaggtgagaggaaaaataaacggagtagatgtgatattcctcattgactgtggagtgacacataatttcatttctgataaattagttaactcactgaattttccaaccaaggaaacatctaattatggtgtgatcctgggttcagacactgctgtgaaggggaagggaatttatgggagagttgatgtattattgggagaatggaagatcattgacagttttctacccttggaactaggaggggttgacgtgcttctatccggaaaaatttccaccaccaagggagattgggcatcacatttatctgaagaaaaaggaacaaatccggtaaacgttcaaccataccggtatgcacaccaccagaaagaggaaatggaaaagttagtggatgagatgctgcagtcaaggatcataagacctagtactagtccctactccagtcctgtattaccggtcaagaagaaagatgggagttggcatttctgtgttgactatcgagctttaaataatgtaactattttggataaattcccaattctggtgatagaggagttatttggtgaactaaatagggctaacatgttctccaagatagatctgaaagccaactatcatcaaataagaatgcaaccaagagatatagagaagacttaccgaaatctgcaggatgggaa ATGGCTAGGAAAATAGAAGAGAGGATGGACTTGGTGGAACAGCAACTTCAGAGGCTTCCAATTATGGATGAGAATTTGTCGTTGATGGCAACAAACATTAAGGAAATAAATACTCAAATTAATAAGCAGCAGCAGCAACAACAGATAATTCTGAAGTACATCGAAGGAATTATGAGTGAAAATTCGGCGGCTGGAAAGATGACAGAGGGCATGACAAGCCAAACGAAGAGCAGCGCCGTAGGGATAACCACCGTAACTGACGAATCCAAGAGGATTAAGACGTCTGAGGATGAAAAACCGATGGACCGAAGCAAATTTAAGAAAGTGGAGATGCCGATATTCAATAGAACCAATACCGATTCATGGTTATTCCGAGCAGATAGGTATATCAAAGTTCATGAACTGACTGATTCGGAGAAACTCATAGTGGCCGTTATCAGTTTTGGCGGGCCTGCCTTGGATTGGTATCATTCAAATGACGAGATGTTGGTCCGATTCCAAACAATTCGAGATGGGTCGCTGGTGGGAAGATTTTTACCCATTAAGCAAGAAACAACCGTAGAAGAATACCAAAACAGTGCGTATGGAGGAAAACAACAATTCAAATTACCATTGGCAAAACACACAGCACCACCAATAACTAACGTCACACAATCGGTGGGATGTTGGCCGATGAGGACTATAACATTGAAAGGAGTCACTGCGGGGGAGAATCGACGAGAAGGCCCAACAAAGAGATTGTCTGATGCTGAGTTCCAATCACGGAGGGAGAAGGGGTTATGCTTTAGATGTGAGGAGAAATACCACGTCGGACATCGATGCAAAGCTAAAGAACAAAAGGAACTCCGAACGATAGTGGTAAAGGAGAACAGGGAGGAATTGGAGATTGTTGAGGAAGATTATTACGAAGCAGAGGCAGAATTTAAAAACACTGAAGTTGAGAACGTGAAGAATTTGAATATTGAATTGTCCCTTAATTCAGTAGTTGGGTTGACTAGCCTGGGAATAATGAAGGTGAGAGGAAAAATAAACGGAGTAGATGTGATATTCCTCATTGACTGTGGAGTGACACATAATTTCATTTCTGATAAATTAGTTAACTCACTGAATTTTCCAACCAAGGAAACATCTAATTATGGTGTGATCCTGGGTTCAGACACTGCTGTGAAGGGGAAGGGAATTTATGGGAGAGTTGATGTATTATTGGGAGAATGGAAGATCATTGACAGTTTTCTACCCTTGGAACTAGGAGGGGTTGACGTGCTTCTATCCGGAAAAATTTCCACCACCAAGGGAGATTGGGCATCACATTTATCTGAAGAAAAAGGAACAAATCCGGTAAACGTTCAACCATACCGGTATGCACACCACCAGAAAGAGGAAATGGAAAAGTTAGTGGATGAGATGCTGCAGTCAAGGATCATAAGACCTAGTACTAGTCCCTACTCCAGTCCTGTATTACCGGTCAAGAAGAAAGATGGGAGTTGGCATTTCTGTGTTGACTATCGAGCTTTAAATAATGTAACTATTTTGGATAAATTCCCAATTCTGGTGATAGAGGAGTTATTTGGTGAACTAAATAGGGCTAACATGTTCTCCAAGATAGATCTGAAAGCCAACTATCATCAAATAAGAATGCAACCAAGAGATATAGAGAAGACTTACCGAAATCTGCAGGATGGGAA MARKIEERMDLVEQQLQRLPIMDENLSLMATNIKEINTQINKQQQQQQIILKYIEGIMSENSAAGKMTEGMTSQTKSSAVGITTVTDESKRIKTSEDEKPMDRSKFKKVEMPIFNRTNTDSWLFRADRYIKVHELTDSEKLIVAVISFGGPALDWYHSNDEMLVRFQTIRDGSLVGRFLPIKQETTVEEYQNSAYGGKQQFKLPLAKHTAPPITNVTQSVGCWPMRTITLKGVTAGENRREGPTKRLSDAEFQSRREKGLCFRCEEKYHVGHRCKAKEQKELRTIVVKENREELEIVEEDYYEAEAEFKNTEVENVKNLNIELSLNSVVGLTSLGIMKVRGKINGVDVIFLIDCGVTHNFISDKLVNSLNFPTKETSNYGVILGSDTAVKGKGIYGRVDVLLGEWKIIDSFLPLELGGVDVLLSGKISTTKGDWASHLSEEKGTNPVNVQPYRYAHHQKEEMEKLVDEMLQSRIIRPSTSPYSSPVLPVKKKDGSWHFCVDYRALNNVTILDKFPILVIEELFGELNRANMFSKIDLKANYHQIRMQPRDIEKTYRNLQDGX
BLAST of Cucsa.079650 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3) HSP 1 Score: 104.4 bits (259), Expect = 4.2e-21 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1
BLAST of Cucsa.079650 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2) HSP 1 Score: 104.4 bits (259), Expect = 4.2e-21 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1
BLAST of Cucsa.079650 vs. Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.4e-16 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1
BLAST of Cucsa.079650 vs. Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.8e-16 Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1
BLAST of Cucsa.079650 vs. Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.6e-15 Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 1
BLAST of Cucsa.079650 vs. TrEMBL
Match: G9FIF5_BETVU (Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.6e-54 Identity = 142/360 (39.44%), Postives = 198/360 (55.00%), Query Frame = 1
BLAST of Cucsa.079650 vs. TrEMBL
Match: G9FIF5_BETVU (Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.5e-04 Identity = 31/101 (30.69%), Postives = 52/101 (51.49%), Query Frame = 1
HSP 2 Score: 209.1 bits (531), Expect = 1.4e-50 Identity = 129/329 (39.21%), Postives = 190/329 (57.75%), Query Frame = 1
BLAST of Cucsa.079650 vs. TrEMBL
Match: A0A087HBU4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G264600 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 9.7e-49 Identity = 121/343 (35.28%), Postives = 182/343 (53.06%), Query Frame = 1
BLAST of Cucsa.079650 vs. TrEMBL
Match: A5BCT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003157 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.1e-47 Identity = 126/331 (38.07%), Postives = 192/331 (58.01%), Query Frame = 1
BLAST of Cucsa.079650 vs. TrEMBL
Match: E5GBA8_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 4.5e-46 Identity = 120/274 (43.80%), Postives = 156/274 (56.93%), Query Frame = 1
BLAST of Cucsa.079650 vs. TAIR10
Match: AT3G30770.1 (AT3G30770.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-07 Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 1
BLAST of Cucsa.079650 vs. TAIR10
Match: ATMG00850.1 (ATMG00850.1 DNA/RNA polymerases superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 3.1e-06 Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 1
BLAST of Cucsa.079650 vs. NCBI nr
Match: gi|659115474|ref|XP_008457576.1| (PREDICTED: uncharacterized protein LOC103497241 [Cucumis melo]) HSP 1 Score: 315.1 bits (806), Expect = 2.5e-82 Identity = 163/274 (59.49%), Postives = 198/274 (72.26%), Query Frame = 1
BLAST of Cucsa.079650 vs. NCBI nr
Match: gi|659119521|ref|XP_008459701.1| (PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo]) HSP 1 Score: 244.2 bits (622), Expect = 5.4e-61 Identity = 142/308 (46.10%), Postives = 188/308 (61.04%), Query Frame = 1
BLAST of Cucsa.079650 vs. NCBI nr
Match: gi|659119521|ref|XP_008459701.1| (PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo]) HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30 Identity = 89/223 (39.91%), Postives = 132/223 (59.19%), Query Frame = 1
HSP 2 Score: 241.1 bits (614), Expect = 4.6e-60 Identity = 129/205 (62.93%), Postives = 151/205 (73.66%), Query Frame = 1
BLAST of Cucsa.079650 vs. NCBI nr
Match: gi|747104585|ref|XP_011100536.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105178703 [Sesamum indicum]) HSP 1 Score: 235.7 bits (600), Expect = 1.9e-58 Identity = 181/572 (31.64%), Postives = 282/572 (49.30%), Query Frame = 1
BLAST of Cucsa.079650 vs. NCBI nr
Match: gi|359372828|gb|AEV42261.1| (hypothetical protein [Beta vulgaris]) HSP 1 Score: 221.5 bits (563), Expect = 3.8e-54 Identity = 142/360 (39.44%), Postives = 198/360 (55.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|