Cucsa.079360 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.079360
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00793 : 1993200 .. 1993552 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGGTTTCTCAACCCAAGAAGCATTTCGCCGACGACCCAAGCTCTTTATTTCGACCGTCGACGACGCACGAAAGCTTTCGGTCGCTACCCAAGTTGAAACATTTCTCCTTCCGTTGACAACCCACGATTGCAATGTATCCCCACCATTTCAAGATTTTGACGCGTCCTACTATTTTCGTCGGCAACCCACAACTTCACGCGTCTCCACCGTTTACTCCAGTGACCCACAACCATTACCATTTCTGTCGACAACCCACAACCATTACCATTTCTGTCGACAACCCACAACCACGAAGAAGCTCTTTGACCCACGATCATTTTCGTTTCGGCTACCACAATTGTTTCTATTTTGA

mRNA sequence

CTGGTTTCTCAACCCAAGAAGCATTTCGCCGACGACCCAAGCTCTTTATTTCGACCGTCGACGACGCACGAAAGCTTTCGGTCGCTACCCAAGTTGAAACATTTCTCCTTCCGTTGACAACCCACGATTGCAATGTATCCCCACCATTTCAAGATTTTGACGCGTCCTACTATTTTCGTCGGCAACCCACAACTTCACGCGTCTCCACCGTTTACTCCAGTGACCCACAACCATTACCATTTCTGTCGACAACCCACAACCATTACCATTTCTGTCGACAACCCACAACCACGAAGAAGCTCTTTGACCCACGATCATTTTCGTTTCGGCTACCACAATTGTTTCTATTTTGA

Coding sequence (CDS)

CTGGTTTCTCAACCCAAGAAGCATTTCGCCGACGACCCAAGCTCTTTATTTCGACCGTCGACGACGCACGAAAGCTTTCGGTCGCTACCCAAGTTGAAACATTTCTCCTTCCGTTGACAACCCACGATTGCAATGTATCCCCACCATTTCAAGATTTTGACGCGTCCTACTATTTTCGTCGGCAACCCACAACTTCACGCGTCTCCACCGTTTACTCCAGTGACCCACAACCATTACCATTTCTGTCGACAACCCACAACCATTACCATTTCTGTCGACAACCCACAACCACGAAGAAGCTCTTTGACCCACGATCATTTTCGTTTCGGCTACCACAATTGTTTCTATTTTGA

Protein sequence

GFSTQEAFRRRPKLFISTVDDARKLSVATQVETFLLPLTTHDCNVSPPFQDFDASYYFRRQPTTSRVSTVYSSDPQPLPFLSTTHNHYHFCRQPTTTKKLFDPRSFSFRLPQLFLF*
Homology
[Close]
BLAST of Cucsa.079360 vs. TrEMBL
Match: A0A0A0M0F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G502890 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-10
Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 1 

Query: 50 QDFDASYYFRRQPTTSRVSTVYSSDPQPLPFLSTTHNH 88
          QDFD S+ FRRQPT+SRVSTV++SDPQPLPFLSTTHNH
Sbjct: 61 QDFDVSHCFRRQPTSSRVSTVFASDPQPLPFLSTTHNH 98

[Close]
BLAST of Cucsa.079360 vs. NCBI nr
Match: gi|700210605|gb|KGN65701.1| (hypothetical protein Csa_1G502890 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 4.5e-10
Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 1 

Query: 50 QDFDASYYFRRQPTTSRVSTVYSSDPQPLPFLSTTHNH 88
          QDFD S+ FRRQPT+SRVSTV++SDPQPLPFLSTTHNH
Sbjct: 61 QDFDVSHCFRRQPTSSRVSTVFASDPQPLPFLSTTHNH 98

The following BLAST results are available for this feature:
BLAST of Cucsa.079360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0F2_CUCSA3.1e-1084.21Uncharacterized protein OS=Cucumis sativus GN=Csa_1G502890 PE=4 SV=1[more]
BLAST of Cucsa.079360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210605|gb|KGN65701.1|4.5e-1084.21hypothetical protein Csa_1G502890 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.079360.1Cucsa.079360.1mRNA