Cucsa.079320 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.079320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold00793 : 1936564 .. 1938327 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTTAGTCTCATTAGTAGTGATGGTAAGAATCCTTGGATCTTGGACTCTGGTGCCACAAATCATTTAACCGATTCCTCTGAACACTTTGTGTCCTACATTTTGTGTGCTGGGAATGAGAAGATAAGGATTGTTGATGGCTCCTTGGCTCCCATTGCCGGGTAAGGGTAGATCTCTCTTTTTGACGGGTTCTCATTACACAATGTGTTGTATGTGCCACAAATTTCATATAATCTTCTGTCAATTAGCAAGATTACTTGTGAATTAAATTGCAAAGCAACGATCTTACCTGATTCTATTTCTTTTCAGGATCTGAGCTCAAGGAGGATGATTGGCACTACTCGACACAATAGGGGTCTTTACTTGCTTGATAATGATGCCTTCTCTAGTAGCATTTCTAGGACGAGTCTTTTATCTTCCCAACCCATAGAAACACAATTCAATACAAAGATTACAACCCCTAAGCTAAACAACATTGAGTCTTGTTTTACTCGCAACCCTATAAGCCAACCCGACCTTTTACTCTTATCCATAGTGATATTTGGAGACCATCGAAGGTCACTACGTTCTCTGGGAAATGATGGTTTATGACCTTTATTGATGATCATAGTCATTTTACTTGGGTTTTTCTGATTTTCGACGAATCCGAAGTTACCTCCACATTTGGGGATTTCTATCACACCATAGAAACACAATTCAATACAAAGATTACAATCCTACAGAGTTCTTATCCTCCGAAGGCATTGCCCACTAAAGTTCTCATGTCTACACGCCCCCAACAAAATGGGGTAGCCGAGCACAAAACCTGTCACCTTTTGGAAGTTGCTTGTTCTCTTATGTTGTCTACTTCCGTTCCTTCCTATATTTGGGCCGATATTGTTCTCACTGTAGCTCATCTCCAAATGTCTTCTCGTGTCCTACATCTCTAGACCCCCTTAGAGTGTCTTAAAGAGTTATATCCCTCTACCCGCCTCATTCTAACGTTCTTTTTCGGTTATTCGGGTACACCGCGAATGTTCATAACTATGACCCTAACCCATCTAAGTTTACCTCTCGGGCTCAGACATGTGTTTTTGTTGGTTACCCTTTACATCAACTAGGCTATAAATGCTTTTTTCTGTATTCTCGTAAGAACTTTGTCTTCATGGATGTTACCTTTCTTGGTATGCTGGAGTGTCGTCTTGCTAATACTCCCATTGAATTCAACTATAAACTGGAAAATTTAGATGATGAAGTTTCTAGTTGATAAAGAACAATATTAGTGTCTTGTGGGTAAGTTGATTTACTTGTCCCATACTCGACCAGATATTTCCTTTGCTGTGAGTGCTGTGAACTAGTTCATGCCGGCTCCCTATGAGGAACACATGGAGGCTGTAAACAGAATACTGATATACTTAAAAATGACTTCTAGTAAAGGATTGATGTTCAGAAAGATGGACTGGAAAACTATTAAGGGTTATCTGATTTAGACTGAATAGGGTCTACCGTGATAGGAAATCTACCTCCGATTATTGTATCTTTGTATGGGCAGTCTTGTAACTTGGCGGAGTAAGAAGTAAGGCGTCGTAGCTAGAAGCAGTGCTGAGGTCGAGTAAAGGGCTATGAGTTTGGGGTTATGTGAGGAAATTTGGATCCAAAAAATTGTTTGATTTTCACTAGAATTGTGAGATAACAGTGAAATTATTTTATGATAACAAGGTAGCCATTAGCATCGCCAACCATCCAGCTCAACATGATAGAACTAAACATGTTGAGATTGATTGA

mRNA sequence

tcctttagtctcattagtagtgatggtaagaatccttggatcttggactctggtgccacaaatcatttaaccgattcctctgaacactttgtgtcctacattttgtgtgctgggaatgagaagataaggattgttgatggctccttggctcccattgccggcaagattacttgtgaattaaattgcaaagcaacgatcttacctgattctatttcttttcaggatctgagctcaaggaggatgattggcactactcgacacaataggggtctttacttgcttgataatgatgccttctctagtagcatttctaggacgagtcttttatcttcccaACCCATAGAAACACAATTCAATACAAAGATTACAACCCCTAAgctaaacaacattgagtcttgttttactcgcaaccctataagccaacccgaccttttactcttatccatagtgatatttggagaccatcgaagtcattttacttgggtttttctgattttcgacgaatccgaagttacctccacatttggggatttctatcacaccatagaaacacaattcaatacaaagattacaatcctacagagttcttatcctccgaaggcattgcccactaaagttctcatgtctacacgcccccaacaaaatggggtagccgagcacaaaacctgtcaccttttggaagttgcttgttctcttatgttgtctacttccgttccttcctatatttgggccgatattgttctcactacccccttagagtgtcttaaagagttatatccctctacccgcctcattctaacgttctttttcggttattcgggtacaccgcgaatgttcataactatgaccctaacccatctaagtttacctctcgggctcagacataactttgtcttcatggatgttacctttcttggtatgctggagtgtcgtcttgctaatactcccattgaattcaactataaactggaaaatttagatgatgaattcatgccggctccctatgaggaacacatggaggctgtaaacagaatactgatatacttaaaaatgacttctagtaaaggattgatgttcagaaagatggactggaaaactattaaggtgaaattattttatgataacaaggtagccattagcatcgccaaccatccagctcaacatgatagaactaaacatgttgagattgattga

Coding sequence (CDS)

TCCTTTAGTCTCATTAGTAGTGATGGTAAGAATCCTTGGATCTTGGACTCTGGTGCCACAAATCATTTAACCGATTCCTCTGAACACTTTGTGTCCTACATTTTGTGTGCTGGGAATGAGAAGATAAGGATTGTTGATGGCTCCTTGGCTCCCATTGCCGGCAAGATTACTTGTGAATTAAATTGCAAAGCAACGATCTTACCTGATTCTATTTCTTTTCAGGATCTGAGCTCAAGGAGGATGATTGGCACTACTCGACACAATAGGGGTCTTTACTTGCTTGATAATGATGCCTTCTCTAGTAGCATTTCTAGGACGAGTCTTTTATCTTCCCAACCCATAGAAACACAATTCAATACAAAGATTACAACCCCTAAGCTAAACAACATTGAGTCTTGTTTTACTCGCAACCCTATAAGCCAACCCGACCTTTTACTCTTATCCATAGTGATATTTGGAGACCATCGAAGTCATTTTACTTGGGTTTTTCTGATTTTCGACGAATCCGAAGTTACCTCCACATTTGGGGATTTCTATCACACCATAGAAACACAATTCAATACAAAGATTACAATCCTACAGAGTTCTTATCCTCCGAAGGCATTGCCCACTAAAGTTCTCATGTCTACACGCCCCCAACAAAATGGGGTAGCCGAGCACAAAACCTGTCACCTTTTGGAAGTTGCTTGTTCTCTTATGTTGTCTACTTCCGTTCCTTCCTATATTTGGGCCGATATTGTTCTCACTACCCCCTTAGAGTGTCTTAAAGAGTTATATCCCTCTACCCGCCTCATTCTAACGTTCTTTTTCGGTTATTCGGGTACACCGCGAATGTTCATAACTATGACCCTAACCCATCTAAGTTTACCTCTCGGGCTCAGACATAACTTTGTCTTCATGGATGTTACCTTTCTTGGTATGCTGGAGTGTCGTCTTGCTAATACTCCCATTGAATTCAACTATAAACTGGAAAATTTAGATGATGAATTCATGCCGGCTCCCTATGAGGAACACATGGAGGCTGTAAACAGAATACTGATATACTTAAAAATGACTTCTAGTAAAGGATTGATGTTCAGAAAGATGGACTGGAAAACTATTAAGGTGAAATTATTTTATGATAACAAGGTAGCCATTAGCATCGCCAACCATCCAGCTCAACATGATAGAACTAAACATGTTGAGATTGATTGA

Protein sequence

SFSLISSDGKNPWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAGKITCELNCKATILPDSISFQDLSSRRMIGTTRHNRGLYLLDNDAFSSSISRTSLLSSQPIETQFNTKITTPKLNNIESCFTRNPISQPDLLLLSIVIFGDHRSHFTWVFLIFDESEVTSTFGDFYHTIETQFNTKITILQSSYPPKALPTKVLMSTRPQQNGVAEHKTCHLLEVACSLMLSTSVPSYIWADIVLTTPLECLKELYPSTRLILTFFFGYSGTPRMFITMTLTHLSLPLGLRHNFVFMDVTFLGMLECRLANTPIEFNYKLENLDDEFMPAPYEEHMEAVNRILIYLKMTSSKGLMFRKMDWKTIKVKLFYDNKVAISIANHPAQHDRTKHVEID*

Homology

[Close]

BLAST of Cucsa.079320 vs. TrEMBL
Match: A5B9Y8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017108 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 114/360 (31.67%), Postives = 165/360 (45.83%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAG----------------- 71
           PWI+DSGA++H+T+SS  F SY  C GN+K++I DG+ +PIAG                 
Sbjct: 280 PWIIDSGASDHMTNSSNMFESYSPCPGNKKVQIADGNFSPIAGKGLIKISEGIDLKFVLH 339

Query: 72  --KITCEL----------NCKATILPDSISFQDLSSRRMIGTTRHNRGLYLLDNDAFSSS 131
             K+TC L          NC          FQD SSR+ IG+ R   GLY  +++  S+ 
Sbjct: 340 VPKLTCNLLFVSKLSRDFNCCVIFYESHCIFQDRSSRKTIGSARMINGLYYFEDNLPSNK 399

Query: 132 ISR-TSLLSSQPIETQ---FNTKITTPKLNNI------------------ESC------- 191
           I++  S +SS  +  Q   ++ K+  P  + +                  ESC       
Sbjct: 400 IAQGLSSISSLFVRDQIMVWHCKLGPPSFSYLKHLFPVLFQKVDPLSFQCESCLLAKSQR 459

Query: 192 --FTRNP--ISQPDLLLLS----------------IVIFGDHRSHFTWVFLIFDESEVTS 251
             +   P   S+P  L  S                 V F D  +   WV+L+ ++SEV  
Sbjct: 460 KTYISKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFIDDHTRLCWVYLMREKSEVER 519

Query: 252 TFGDFYHTIETQFNTKITILQS----SYPPKALPT---------KVLMSTRPQQNGVAEH 265
            F +FY  IE QF TKI+IL+S     Y  K L T         +   S  PQQNG+A+ 
Sbjct: 520 IFKEFYKMIENQFQTKISILRSDNGTKYFNKVLETFSNKKGILHQSSCSDTPQQNGIAQR 579

[Close]

BLAST of Cucsa.079320 vs. TrEMBL
Match: A5B9Y8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017108 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-02
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 1


Query: 342  VNRILIYLKMTSSKGLMFRKMDWKTIKVKLFYDNKVAISIANHPAQHDRTKHVEID 398
            + R+L  LKMT S  +            KL+ DNK AIS+A++P  HDRTKHVE+D
Sbjct: 1320 IRRLLEELKMTCSSPM------------KLYCDNKAAISVAHNPVLHDRTKHVEVD 1363

HSP 2 Score: 37.0 bits (84), Expect = 6.5e+01
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 1


Query: 329  EFMPAPYEEHMEAVNRILIYLKMTSSKGLMFR 361
            +FM  P  EH E V RIL YLK T  +GL+F+
Sbjct: 1220 QFMHVPRPEHFEVVYRILRYLKGTPGRGLLFK 1251

HSP 3 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 103/291 (35.40%), Postives = 140/291 (48.11%), Query Frame = 1


Query: 1   SFSLISSDGKNPWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAG------ 60
           + S I S+   PWI+DSGAT+H+T SS+ F SY  CAGN+KI+I DGSL+ IAG      
Sbjct: 233 ALSSIKSNVHCPWIIDSGATDHMTGSSQIFSSYKPCAGNKKIKIADGSLSAIAGKGSVFI 292

Query: 61  -----------------------KITCELNCKATILPDSISFQDLSSRRMIGTTRHNRGL 120
                                  KIT +  C+A   P    FQ+L+S R IG  R   GL
Sbjct: 293 SPSLTLHNVLHVPNLSCNLLSISKITQDHQCQANFYPSYCEFQELTSGRTIGNAREIGGL 352

Query: 121 YLLDNDAFSSSISRTSLLSSQPIETQFNTKITTPKLNNIESCFTRNPISQPDLLLLSIVI 180
           Y  +N +           S +PI++     I      ++   +     SQ  L     V 
Sbjct: 353 YFFENGS----------ESRKPIQSTCFESI------SVAMMYGGLQESQHFLXKKWFVT 412

Query: 181 FGDHRSHFTWVFLIFDESEVTSTFGDFYHTIETQFNTKITILQS----SYPPKALPTKVL 240
           F D  +  +WV+L+ ++SEV   F  FY  + TQF TKI + +S     Y  KAL    L
Sbjct: 413 FIDDHTRVSWVYLLXEKSEVEEVFKIFYTMVLTQFQTKIQVFRSDNGKEYFNKALGKFFL 472

Query: 241 ---------MSTRPQQNGVAEHKTCHLLEVACSLMLSTSVPSYIWADIVLT 250
                     +  PQQNG+AE K  HLLEVA +L  +T VP Y+W + +LT
Sbjct: 473 EKGIVHXSSCNDTPQQNGIAERKNKHLLEVARALCFTTKVPKYLWGEAILT 507

[Close]

BLAST of Cucsa.079320 vs. TrEMBL
Match: A5AMR4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006313 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.0e-03
Identity = 35/97 (36.08%), Postives = 44/97 (45.36%), Query Frame = 1


Query: 306  GMLECRLANTPIEFNYKLENLDD----------------------------------EFM 365
            GM  CR A+TPI+ N KL +  D                                  +FM
Sbjct: 1003 GMSGCRPADTPIDPNQKLGDTKDGNLVNTTXYQKLVGKLIYLSHTXPDIAFAVSIVSQFM 1062

Query: 366  PAPYEEHMEAVNRILIYLKMTSSKGLMFRKMDWKTIK 369
             + YE H+EAV RIL YLK T  KGL F+K + KTI+
Sbjct: 1063 XSXYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIE 1099

HSP 2 Score: 49.7 bits (117), Expect = 9.7e-03
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 1


Query: 369  VKLFYDNKVAISIANHPAQHDRTKHVEID 398
            +KL+ DNK AISIA++P QHDRTKHVEID
Sbjct: 1165 MKLYCDNKAAISIAHNPXQHDRTKHVEID 1193

HSP 3 Score: 134.0 bits (336), Expect = 3.9e-28
Identity = 91/284 (32.04%), Postives = 142/284 (50.00%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAGK---------------- 71
           PWI+DS A++H+TD+   F +Y  CAGN K++I DG+L+ +AGK                
Sbjct: 120 PWIIDSSASDHMTDAHHLFSTYSPCAGNLKVKIADGTLSRVAGKGSIRISESITLNPVLY 179

Query: 72  ---ITCEL----------NCKATILPDSISFQDLSSRRMIGTTRHNRGLYLLD-NDAFSS 131
              ++C L          NC A  LP    FQDLSS + IG+ +    LY  D  D    
Sbjct: 180 VPNLSCNLLSISQLTKRSNCSAKFLPSHYVFQDLSSGKTIGSAKERESLYYFDETDVLGQ 239

Query: 132 SISRTSLLSSQPIETQ---FNTKITTPKLNNIESCFTRNPISQPDLLLLS-IVIFGDHRS 191
           S S     +S P +++   ++ ++  P  +++       P   P++      V F D  +
Sbjct: 240 SSSTVCNSTSYPKDSELLLWHKRMGHPSFHDL-----WGPSRTPNMTHKKWFVTFIDDHT 299

Query: 192 HFTWVFLIFDESEVTSTFGDFYHTIETQFNTKITILQS----SYPPKALPTKVLMS---- 249
              WV+L+ D++EV S F +F+  I+TQF+TKI IL++     Y   +L T +  +    
Sbjct: 300 RLCWVYLLTDKTEVRSVFMNFHSMIQTQFHTKIQILRTDNGIEYFNHSLSTYLQENGIIH 359

[Close]

BLAST of Cucsa.079320 vs. TrEMBL
Match: A5AX59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015869 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 3.1e-01
Identity = 44/163 (26.99%), Postives = 75/163 (46.01%), Query Frame = 1


Query: 245 DIVLT----TPLECLKELYPSTRLILTFFFGYSGTPRMFITMTLTHLSLPLGLRHNFVFM 304
           DI+LT      +E LK +     L + F     G  + F+ M +      + +      +
Sbjct: 669 DIILTGDDTREVERLKNV-----LAIEFEVKDLGQMQYFLXMEVARSRKGISISQXKYVL 728

Query: 305 DV-TFLGMLECRLANTPIEFNYKLE-NLDDEFMPAPYEEHMEAVNRILIYLKMTSSKGLM 364
           D+ T   ML C+  +TPI+   K+E     +         +EA  R +        +GL 
Sbjct: 729 DLLTXTDMLGCKPNDTPIKARNKMEITWRSKKXSVVARSSVEAEFRAVA---QGMCEGLW 788

Query: 365 FRKMDWKT-----IKVKLFYDNKVAISIANHPAQHDRTKHVEI 397
            +K+  +      + +K + DNK AISI+++P QHD+TKH+E+
Sbjct: 789 LQKLLEELRITIELPIKPYCDNKXAISISHNPVQHDKTKHIEV 823

HSP 2 Score: 131.7 bits (330), Expect = 1.9e-27
Identity = 98/311 (31.51%), Postives = 141/311 (45.34%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAGK---------------- 71
           PWI+DS A++H+ D+   F +Y  CAGN K++I DG+L+PIA K                
Sbjct: 336 PWIIDSSASDHMIDAHHLFSTYSPCAGNLKVKITDGTLSPIASKGSIRISESITLNPVLH 395

Query: 72  ---ITCEL----------NCKATILPDSISFQDLSSRRMIGTTRHNRGLYLLDNDAFSSS 131
              ++C L          NC A  LP    FQDLSS + IG+ + + GLY  D       
Sbjct: 396 VPKLSCNLLSVSQLTKDSNCSAKFLPSHCVFQDLSSGKTIGSAKEHEGLYYFDETDVLGQ 455

Query: 132 ISRTSLLSSQPIETQFNTKITTPKLNNIESCFTRNPISQPDLLLLSIVIFGDHRSHFTWV 191
                L+   P           P +  I++ FT                F D  +   WV
Sbjct: 456 -----LIYGVP---------HVPLIGPIKNGFT----------------FIDDHTRLCWV 515

Query: 192 FLIFDESEVTSTFGDFYHTIETQFNTKITILQ----SSYPPKALPTKVLMS--------- 251
           +L+ D++EV S F +F+  I+TQF TKI IL+    + Y   +L T +  +         
Sbjct: 516 YLLTDKTEVRSVFLNFHSMIQTQFQTKIQILRTDNGTKYFNHSLSTYLQENGIIHQSSCV 575

Query: 252 TRPQQNGVAEHKTCHLLEVACSLMLSTSVPSYIWADIVLT----------------TPLE 265
             PQQNGVAE K  H+LEVA +L+ ++  PS  W D +LT                T L+
Sbjct: 576 DTPQQNGVAEQKNRHILEVARALLFTSHRPSQFWGDSILTATYLINRMPSRVLSFVTSLQ 616

[Close]

BLAST of Cucsa.079320 vs. TrEMBL
Match: A5B8S8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026000 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 6.3e-02
Identity = 35/129 (27.13%), Postives = 58/129 (44.96%), Query Frame = 1


Query: 274  GTPRMFITMTLTHLSLPLGLRHNFVFMDV-TFLGMLECRLANTPIEFNYKLEN----LDD 333
            G  R F+ M +      + +      +D+ T  GML C+ ++TPIE   ++E+    +D 
Sbjct: 997  GQMRYFLGMEVARSRKGINISQRKYVLDLLTETGMLGCKPSDTPIEARNRMESDGKLVDK 1056

Query: 334  E----------------------------FMPAPYEEHMEAVNRILIYLKMTSSKGLMFR 370
            E                            +M +P E H+EAV +IL YLK +  +GL F+
Sbjct: 1057 EKYQRLVGRLIYLSHTRPDIAFAVSVVSQYMHSPKESHLEAVYKILRYLKGSPGRGLFFK 1116

HSP 2 Score: 45.8 bits (107), Expect = 1.4e-01
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 1


Query: 367  IKVKLFYDNKVAISIANHPAQHDRTKHVEID 398
            + +KL+ DNK AISI+ +P QHD TKH+E+D
Sbjct: 1180 LPIKLYCDNKAAISISQNPVQHDITKHIEVD 1210

HSP 3 Score: 122.1 bits (305), Expect = 1.5e-24
Identity = 100/335 (29.85%), Postives = 156/335 (46.57%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAG----KITCELNCKATIL 71
           PWI+D GA++H+T+SS  F SY  C GN+K+RI +G+  PI G    KI+  ++ K+ + 
Sbjct: 241 PWIVDFGASDHMTNSSNMFESYSPCPGNKKVRIANGNFLPIVGKGLIKISEGIDLKSVL- 300

Query: 72  PDSISFQDLSSRRMIGTTRHNRGLYLLDNDAFSSSISR-TSLLSSQPIETQ---FNTKIT 131
              +   D SS + IG+ R   GLY  +++  S+ I++  S +SS  +  Q   ++ ++ 
Sbjct: 301 --HVPKLDQSSGKTIGSARMIDGLYYFEDNLPSNKIAQGLSSISSLFVRDQIMVWHCRLG 360

Query: 132 TPKLNNI------------------ESCF-----TRNPISQPDLLLLSIVIFGDH----- 191
            P  + +                  ESC       +  I +P        +F        
Sbjct: 361 HPSFSYLKHLFPVLFQKVDPLSFQCESCLLAKSQRKTYIPKPYYASKPFYLFHSDVWGPS 420

Query: 192 ---------------RSH--FTWVFLIFDESEVTSTFGDFYHTIETQFNTKITILQS--- 251
                            H    WV+L+ ++S+V   F +FY  IE QF TKI+IL+S   
Sbjct: 421 KVTTISGKKWFVTFINDHTRLCWVYLMREKSKVERIFKEFYRMIENQFQTKISILRSDNG 480

Query: 252 -SYPPKALPT---------KVLMSTRPQQNGVAEHKTCHLLEVACSLMLSTSVPSYIWAD 265
             Y  K L T         +   S   +QNG+AE K  HLLEVA ++M   ++P Y+W D
Sbjct: 481 IEYFNKVLETFSNEKGILHQSSCSDTSEQNGIAECKNKHLLEVARAMMFYMNIPKYLWRD 540

[Close]

BLAST of Cucsa.079320 vs. NCBI nr
Match: gi|147770062|emb|CAN72141.1| (hypothetical protein VITISV_017108 [Vitis vinifera])

HSP 1 Score: 147.9 bits (372), Expect = 3.8e-32
Identity = 114/360 (31.67%), Postives = 165/360 (45.83%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAG----------------- 71
           PWI+DSGA++H+T+SS  F SY  C GN+K++I DG+ +PIAG                 
Sbjct: 280 PWIIDSGASDHMTNSSNMFESYSPCPGNKKVQIADGNFSPIAGKGLIKISEGIDLKFVLH 339

Query: 72  --KITCEL----------NCKATILPDSISFQDLSSRRMIGTTRHNRGLYLLDNDAFSSS 131
             K+TC L          NC          FQD SSR+ IG+ R   GLY  +++  S+ 
Sbjct: 340 VPKLTCNLLFVSKLSRDFNCCVIFYESHCIFQDRSSRKTIGSARMINGLYYFEDNLPSNK 399

Query: 132 ISR-TSLLSSQPIETQ---FNTKITTPKLNNI------------------ESC------- 191
           I++  S +SS  +  Q   ++ K+  P  + +                  ESC       
Sbjct: 400 IAQGLSSISSLFVRDQIMVWHCKLGPPSFSYLKHLFPVLFQKVDPLSFQCESCLLAKSQR 459

Query: 192 --FTRNP--ISQPDLLLLS----------------IVIFGDHRSHFTWVFLIFDESEVTS 251
             +   P   S+P  L  S                 V F D  +   WV+L+ ++SEV  
Sbjct: 460 KTYISKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFIDDHTRLCWVYLMREKSEVER 519

Query: 252 TFGDFYHTIETQFNTKITILQS----SYPPKALPT---------KVLMSTRPQQNGVAEH 265
            F +FY  IE QF TKI+IL+S     Y  K L T         +   S  PQQNG+A+ 
Sbjct: 520 IFKEFYKMIENQFQTKISILRSDNGTKYFNKVLETFSNKKGILHQSSCSDTPQQNGIAQR 579

[Close]

BLAST of Cucsa.079320 vs. NCBI nr
Match: gi|147770062|emb|CAN72141.1| (hypothetical protein VITISV_017108 [Vitis vinifera])

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-02
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 1


Query: 342  VNRILIYLKMTSSKGLMFRKMDWKTIKVKLFYDNKVAISIANHPAQHDRTKHVEID 398
            + R+L  LKMT S  +            KL+ DNK AIS+A++P  HDRTKHVE+D
Sbjct: 1320 IRRLLEELKMTCSSPM------------KLYCDNKAAISVAHNPVLHDRTKHVEVD 1363

HSP 2 Score: 37.0 bits (84), Expect = 9.3e+01
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 1


Query: 329  EFMPAPYEEHMEAVNRILIYLKMTSSKGLMFR 361
            +FM  P  EH E V RIL YLK T  +GL+F+
Sbjct: 1220 QFMHVPRPEHFEVVYRILRYLKGTPGRGLLFK 1251

HSP 3 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 103/291 (35.40%), Postives = 140/291 (48.11%), Query Frame = 1


Query: 1   SFSLISSDGKNPWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAG------ 60
           + S I S+   PWI+DSGAT+H+T SS+ F SY  CAGN+KI+I DGSL+ IAG      
Sbjct: 233 ALSSIKSNVHCPWIIDSGATDHMTGSSQIFSSYKPCAGNKKIKIADGSLSAIAGKGSVFI 292

Query: 61  -----------------------KITCELNCKATILPDSISFQDLSSRRMIGTTRHNRGL 120
                                  KIT +  C+A   P    FQ+L+S R IG  R   GL
Sbjct: 293 SPSLTLHNVLHVPNLSCNLLSISKITQDHQCQANFYPSYCEFQELTSGRTIGNAREIGGL 352

Query: 121 YLLDNDAFSSSISRTSLLSSQPIETQFNTKITTPKLNNIESCFTRNPISQPDLLLLSIVI 180
           Y  +N +           S +PI++     I      ++   +     SQ  L     V 
Sbjct: 353 YFFENGS----------ESRKPIQSTCFESI------SVAMMYGGLQESQHFLXKKWFVT 412

Query: 181 FGDHRSHFTWVFLIFDESEVTSTFGDFYHTIETQFNTKITILQS----SYPPKALPTKVL 240
           F D  +  +WV+L+ ++SEV   F  FY  + TQF TKI + +S     Y  KAL    L
Sbjct: 413 FIDDHTRVSWVYLLXEKSEVEEVFKIFYTMVLTQFQTKIQVFRSDNGKEYFNKALGKFFL 472

Query: 241 ---------MSTRPQQNGVAEHKTCHLLEVACSLMLSTSVPSYIWADIVLT 250
                     +  PQQNG+AE K  HLLEVA +L  +T VP Y+W + +LT
Sbjct: 473 EKGIVHXSSCNDTPQQNGIAERKNKHLLEVARALCFTTKVPKYLWGEAILT 507

[Close]

BLAST of Cucsa.079320 vs. NCBI nr
Match: gi|147819165|emb|CAN62636.1| (hypothetical protein VITISV_006313 [Vitis vinifera])

HSP 1 Score: 52.0 bits (123), Expect = 2.8e-03
Identity = 35/97 (36.08%), Postives = 44/97 (45.36%), Query Frame = 1


Query: 306  GMLECRLANTPIEFNYKLENLDD----------------------------------EFM 365
            GM  CR A+TPI+ N KL +  D                                  +FM
Sbjct: 1003 GMSGCRPADTPIDPNQKLGDTKDGNLVNTTXYQKLVGKLIYLSHTXPDIAFAVSIVSQFM 1062

Query: 366  PAPYEEHMEAVNRILIYLKMTSSKGLMFRKMDWKTIK 369
             + YE H+EAV RIL YLK T  KGL F+K + KTI+
Sbjct: 1063 XSXYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIE 1099

HSP 2 Score: 49.7 bits (117), Expect = 1.4e-02
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 1


Query: 369  VKLFYDNKVAISIANHPAQHDRTKHVEID 398
            +KL+ DNK AISIA++P QHDRTKHVEID
Sbjct: 1165 MKLYCDNKAAISIAHNPXQHDRTKHVEID 1193

HSP 3 Score: 134.0 bits (336), Expect = 5.6e-28
Identity = 91/284 (32.04%), Postives = 142/284 (50.00%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAGK---------------- 71
           PWI+DS A++H+TD+   F +Y  CAGN K++I DG+L+ +AGK                
Sbjct: 120 PWIIDSSASDHMTDAHHLFSTYSPCAGNLKVKIADGTLSRVAGKGSIRISESITLNPVLY 179

Query: 72  ---ITCEL----------NCKATILPDSISFQDLSSRRMIGTTRHNRGLYLLD-NDAFSS 131
              ++C L          NC A  LP    FQDLSS + IG+ +    LY  D  D    
Sbjct: 180 VPNLSCNLLSISQLTKRSNCSAKFLPSHYVFQDLSSGKTIGSAKERESLYYFDETDVLGQ 239

Query: 132 SISRTSLLSSQPIETQ---FNTKITTPKLNNIESCFTRNPISQPDLLLLS-IVIFGDHRS 191
           S S     +S P +++   ++ ++  P  +++       P   P++      V F D  +
Sbjct: 240 SSSTVCNSTSYPKDSELLLWHKRMGHPSFHDL-----WGPSRTPNMTHKKWFVTFIDDHT 299

Query: 192 HFTWVFLIFDESEVTSTFGDFYHTIETQFNTKITILQS----SYPPKALPTKVLMS---- 249
              WV+L+ D++EV S F +F+  I+TQF+TKI IL++     Y   +L T +  +    
Sbjct: 300 RLCWVYLLTDKTEVRSVFMNFHSMIQTQFHTKIQILRTDNGIEYFNHSLSTYLQENGIIH 359

[Close]

BLAST of Cucsa.079320 vs. NCBI nr
Match: gi|147798168|emb|CAN60702.1| (hypothetical protein VITISV_015869 [Vitis vinifera])

HSP 1 Score: 44.7 bits (104), Expect = 4.5e-01
Identity = 44/163 (26.99%), Postives = 75/163 (46.01%), Query Frame = 1


Query: 245 DIVLT----TPLECLKELYPSTRLILTFFFGYSGTPRMFITMTLTHLSLPLGLRHNFVFM 304
           DI+LT      +E LK +     L + F     G  + F+ M +      + +      +
Sbjct: 669 DIILTGDDTREVERLKNV-----LAIEFEVKDLGQMQYFLXMEVARSRKGISISQXKYVL 728

Query: 305 DV-TFLGMLECRLANTPIEFNYKLE-NLDDEFMPAPYEEHMEAVNRILIYLKMTSSKGLM 364
           D+ T   ML C+  +TPI+   K+E     +         +EA  R +        +GL 
Sbjct: 729 DLLTXTDMLGCKPNDTPIKARNKMEITWRSKKXSVVARSSVEAEFRAVA---QGMCEGLW 788

Query: 365 FRKMDWKT-----IKVKLFYDNKVAISIANHPAQHDRTKHVEI 397
            +K+  +      + +K + DNK AISI+++P QHD+TKH+E+
Sbjct: 789 LQKLLEELRITIELPIKPYCDNKXAISISHNPVQHDKTKHIEV 823

HSP 2 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 98/311 (31.51%), Postives = 141/311 (45.34%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAGK---------------- 71
           PWI+DS A++H+ D+   F +Y  CAGN K++I DG+L+PIA K                
Sbjct: 336 PWIIDSSASDHMIDAHHLFSTYSPCAGNLKVKITDGTLSPIASKGSIRISESITLNPVLH 395

Query: 72  ---ITCEL----------NCKATILPDSISFQDLSSRRMIGTTRHNRGLYLLDNDAFSSS 131
              ++C L          NC A  LP    FQDLSS + IG+ + + GLY  D       
Sbjct: 396 VPKLSCNLLSVSQLTKDSNCSAKFLPSHCVFQDLSSGKTIGSAKEHEGLYYFDETDVLGQ 455

Query: 132 ISRTSLLSSQPIETQFNTKITTPKLNNIESCFTRNPISQPDLLLLSIVIFGDHRSHFTWV 191
                L+   P           P +  I++ FT                F D  +   WV
Sbjct: 456 -----LIYGVP---------HVPLIGPIKNGFT----------------FIDDHTRLCWV 515

Query: 192 FLIFDESEVTSTFGDFYHTIETQFNTKITILQ----SSYPPKALPTKVLMS--------- 251
           +L+ D++EV S F +F+  I+TQF TKI IL+    + Y   +L T +  +         
Sbjct: 516 YLLTDKTEVRSVFLNFHSMIQTQFQTKIQILRTDNGTKYFNHSLSTYLQENGIIHQSSCV 575

Query: 252 TRPQQNGVAEHKTCHLLEVACSLMLSTSVPSYIWADIVLT----------------TPLE 265
             PQQNGVAE K  H+LEVA +L+ ++  PS  W D +LT                T L+
Sbjct: 576 DTPQQNGVAEQKNRHILEVARALLFTSHRPSQFWGDSILTATYLINRMPSRVLSFVTSLQ 616

[Close]

BLAST of Cucsa.079320 vs. NCBI nr
Match: gi|147820359|emb|CAN69836.1| (hypothetical protein VITISV_026000 [Vitis vinifera])

HSP 1 Score: 47.0 bits (110), Expect = 9.0e-02
Identity = 35/129 (27.13%), Postives = 58/129 (44.96%), Query Frame = 1


Query: 274  GTPRMFITMTLTHLSLPLGLRHNFVFMDV-TFLGMLECRLANTPIEFNYKLEN----LDD 333
            G  R F+ M +      + +      +D+ T  GML C+ ++TPIE   ++E+    +D 
Sbjct: 997  GQMRYFLGMEVARSRKGINISQRKYVLDLLTETGMLGCKPSDTPIEARNRMESDGKLVDK 1056

Query: 334  E----------------------------FMPAPYEEHMEAVNRILIYLKMTSSKGLMFR 370
            E                            +M +P E H+EAV +IL YLK +  +GL F+
Sbjct: 1057 EKYQRLVGRLIYLSHTRPDIAFAVSVVSQYMHSPKESHLEAVYKILRYLKGSPGRGLFFK 1116

HSP 2 Score: 45.8 bits (107), Expect = 2.0e-01
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 1


Query: 367  IKVKLFYDNKVAISIANHPAQHDRTKHVEID 398
            + +KL+ DNK AISI+ +P QHD TKH+E+D
Sbjct: 1180 LPIKLYCDNKAAISISQNPVQHDITKHIEVD 1210

HSP 3 Score: 122.1 bits (305), Expect = 2.2e-24
Identity = 100/335 (29.85%), Postives = 156/335 (46.57%), Query Frame = 1


Query: 12  PWILDSGATNHLTDSSEHFVSYILCAGNEKIRIVDGSLAPIAG----KITCELNCKATIL 71
           PWI+D GA++H+T+SS  F SY  C GN+K+RI +G+  PI G    KI+  ++ K+ + 
Sbjct: 241 PWIVDFGASDHMTNSSNMFESYSPCPGNKKVRIANGNFLPIVGKGLIKISEGIDLKSVL- 300

Query: 72  PDSISFQDLSSRRMIGTTRHNRGLYLLDNDAFSSSISR-TSLLSSQPIETQ---FNTKIT 131
              +   D SS + IG+ R   GLY  +++  S+ I++  S +SS  +  Q   ++ ++ 
Sbjct: 301 --HVPKLDQSSGKTIGSARMIDGLYYFEDNLPSNKIAQGLSSISSLFVRDQIMVWHCRLG 360

Query: 132 TPKLNNI------------------ESCF-----TRNPISQPDLLLLSIVIFGDH----- 191
            P  + +                  ESC       +  I +P        +F        
Sbjct: 361 HPSFSYLKHLFPVLFQKVDPLSFQCESCLLAKSQRKTYIPKPYYASKPFYLFHSDVWGPS 420

Query: 192 ---------------RSH--FTWVFLIFDESEVTSTFGDFYHTIETQFNTKITILQS--- 251
                            H    WV+L+ ++S+V   F +FY  IE QF TKI+IL+S   
Sbjct: 421 KVTTISGKKWFVTFINDHTRLCWVYLMREKSKVERIFKEFYRMIENQFQTKISILRSDNG 480

Query: 252 -SYPPKALPT---------KVLMSTRPQQNGVAEHKTCHLLEVACSLMLSTSVPSYIWAD 265
             Y  K L T         +   S   +QNG+AE K  HLLEVA ++M   ++P Y+W D
Sbjct: 481 IEYFNKVLETFSNEKGILHQSSCSDTSEQNGIAECKNKHLLEVARAMMFYMNIPKYLWRD 540

The following BLAST results are available for this feature:

BLAST of Cucsa.079320 vs. TrEMBL


Match Name	E-value	Identity	Description
A5B9Y8_VITVI	2.6e-32	31.67	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017108 PE=4 SV=1	[more]
A5B9Y8_VITVI	1.3e-02	46.43	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017108 PE=4 SV=1	[more]
A5AMR4_VITVI	2.0e-03	36.08	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006313 PE=4 SV=1	[more]
A5AX59_VITVI	3.1e-01	26.99	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015869 PE=4 SV=1	[more]
A5B8S8_VITVI	6.3e-02	27.13	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026000 PE=4 SV=1	[more]

BLAST of Cucsa.079320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147770062\|emb\|CAN72141.1\|	3.8e-32	31.67	hypothetical protein VITISV_017108 [Vitis vinifera]	[more]
gi\|147770062\|emb\|CAN72141.1\|	1.8e-02	46.43	hypothetical protein VITISV_017108 [Vitis vinifera]	[more]
gi\|147819165\|emb\|CAN62636.1\|	2.8e-03	36.08	hypothetical protein VITISV_006313 [Vitis vinifera]	[more]
gi\|147798168\|emb\|CAN60702.1\|	4.5e-01	26.99	hypothetical protein VITISV_015869 [Vitis vinifera]	[more]
gi\|147820359\|emb\|CAN69836.1\|	9.0e-02	27.13	hypothetical protein VITISV_026000 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.079320.1	Cucsa.079320.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.079320	CSPI07G12940	Wild cucumber (PI 183967)	cgycpiB079

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.079320	Wax gourd	cgywgoB092
Cucsa.079320	Wax gourd	cgywgoB094
Cucsa.079320	Cucurbita maxima (Rimu)	cgycmaB0133
Cucsa.079320	Cucurbita maxima (Rimu)	cgycmaB0135
Cucsa.079320	Cucurbita maxima (Rimu)	cgycmaB0139
Cucsa.079320	Cucurbita maxima (Rimu)	cgycmaB0142
Cucsa.079320	Cucurbita moschata (Rifu)	cgycmoB0130
Cucsa.079320	Cucurbita moschata (Rifu)	cgycmoB0132
Cucsa.079320	Cucurbita moschata (Rifu)	cgycmoB0135
Cucsa.079320	Cucurbita moschata (Rifu)	cgycmoB0137
Cucsa.079320	Cucumber (Chinese Long) v2	cgycuB076
Cucsa.079320	Melon (DHL92) v3.5.1	cgymeB085
Cucsa.079320	Watermelon (Charleston Gray)	cgywcgB081
Cucsa.079320	Watermelon (97103) v1	cgywmB083
Cucsa.079320	Cucurbita pepo (Zucchini)	cgycpeB0136
Cucsa.079320	Cucurbita pepo (Zucchini)	cgycpeB0137
Cucsa.079320	Cucurbita pepo (Zucchini)	cgycpeB0139
Cucsa.079320	Bottle gourd (USVL1VR-Ls)	cgylsiB081
Cucsa.079320	Melon (DHL92) v3.6.1	cgymedB083
Cucsa.079320	Silver-seed gourd	carcgyB0071
Cucsa.079320	Silver-seed gourd	carcgyB0341
Cucsa.079320	Silver-seed gourd	carcgyB0945
Cucsa.079320	Silver-seed gourd	carcgyB1128
Cucsa.079320	Cucumber (Chinese Long) v3	cgycucB080
Cucsa.079320	Watermelon (97103) v2	cgywmbB078