Cucsa.074560 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAGCATGGTTAAGGAGGCTAAAGCTCAAGCAAAAGTTAGGGTTGGAATTGAAACCCTATGGAAAGCTTTGGTAAAAGACTTGAGATTTATCATTCCAAAGCTCATGCCTAACACTGTTGAAAAAATTGAGCTCATTCATGGAAACGGTGGCCTTGGCTCAGTCTTCCTCTTCCATCTTGGCCGTGGTCAGTTCTTTTGTTTTCTTCCATGTTGTTACCATTATGTTTTAGCTTTCTTTATTTTCATTGGCAATCATTTGACCCTACCATAATTTGATGGGTTAAACCCATATGGTGAATGGAATCCTTGTGTCAAACTAATATGGTGAATTCATATATATGTATAGACATATATATTTAGCTAGATAGTTAAAACTGAATACACAAAATATATAAAAATTGAAGCCCTTATTTATTTTGATATATAACTATGTGATTTCCTGCTTTTGAACATTATGTTTGTTTCCCCACTAAATTTTATGCATGATTATAAACATCTAAGTTATTAGCCAAGTTCAAAAAACAAAAAAAAATATAAGTTTTAAAAACTTATTAATTTTACTTTTTTTTTTCTTTTCTTTGTTAAGTTTTATAAACTTAGCTTTGGAAAACTATCCTAGAATATAGATACATAAACCAATATGTTGAAGTAGTTATTATAGGCTTTTTAAGTTTGTTTCAATACCAAAAAATCAAAACTAAATTTTTTCAATTCAGCCCCTCAATCATTCTAAAATGTTAAATCACTAATTGGTCCAAAACTAACTTAAGTTGATGAGTATTAAGTATTAGAATGGATATAATATTTTTACAATATATTATAAACACACAGAGCTCAAATATTAGTTCATGACTGTCGACCAATACAATGAATATAAAATAAGGTCCTCTCCTACCTATTTAGGTAAATCACTAAAATATATTCTCAAATAAATCATTAAAATCTCCCCCAAAAAAAATTGATTTGCAGGTGTGAAGATTGTGAAAATCCAGAAGGAAAGGATTGTAGAACTTGATGAGACAAAACATGAATTTGGGCTAGAAGTAATGGAAGGAATTCTCTTAAAAAGAGGGTTTTCTTCTTTCAAGACAACATTTAAGCTTTTTTCCATGAAAGAGAAAGAAACCCTAGTGGAAGTCAAGGTTGTTTATGGGACTGAAAGAGATGATGAAGATGAAGTTCACATGGAAGAAGTGGCAACCAAGCCAGCTCTTTCTTTTCTCCAACTCTTGGAAAAGTTTCTTATTGATTCATCTTCTTAAAAGAAAATCTCTTGTTTAGTCTCTTCTTTCATGTATCATTTTAGTTGATATTCTAATCTCTGACATCACCAATTGTACTACTACAAAATATTTTATATATTAATTTCTAAATGTTCCAATAG GGAGAGCATGGTTAAGGAGGCTAAAGCTCAAGCAAAAGTTAGGGTTGGAATTGAAACCCTATGGAAAGCTTTGGTAAAAGACTTGAGATTTATCATTCCAAAGCTCATGCCTAACACTGTTGAAAAAATTGAGCTCATTCATGGAAACGGTGGCCTTGGCTCAGTCTTCCTCTTCCATCTTGGCCGTGGTGTGAAGATTGTGAAAATCCAGAAGGAAAGGATTGTAGAACTTGATGAGACAAAACATGAATTTGGGCTAGAAGTAATGGAAGGAATTCTCTTAAAAAGAGGGTTTTCTTCTTTCAAGACAACATTTAAGCTTTTTTCCATGAAAGAGAAAGAAACCCTAGTGGAAGTCAAGGTTGTTTATGGGACTGAAAGAGATGATGAAGATGAAGTTCACATGGAAGAAGTGGCAACCAAGCCAGCTCTTTCTTTTCTCCAACTCTTGGAAAAGTTTCTTATTGATTCATCTTCTTAAAAGAAAATCTCTTGTTTAGTCTCTTCTTTCATGTATCATTTTAGTTGATATTCTAATCTCTGACATCACCAATTGTACTACTACaaaatattttatatattaatttCTAAATGTTCCAATAG ATGGTTAAGGAGGCTAAAGCTCAAGCAAAAGTTAGGGTTGGAATTGAAACCCTATGGAAAGCTTTGGTAAAAGACTTGAGATTTATCATTCCAAAGCTCATGCCTAACACTGTTGAAAAAATTGAGCTCATTCATGGAAACGGTGGCCTTGGCTCAGTCTTCCTCTTCCATCTTGGCCGTGGTGTGAAGATTGTGAAAATCCAGAAGGAAAGGATTGTAGAACTTGATGAGACAAAACATGAATTTGGGCTAGAAGTAATGGAAGGAATTCTCTTAAAAAGAGGGTTTTCTTCTTTCAAGACAACATTTAAGCTTTTTTCCATGAAAGAGAAAGAAACCCTAGTGGAAGTCAAGGTTGTTTATGGGACTGAAAGAGATGATGAAGATGAAGTTCACATGGAAGAAGTGGCAACCAAGCCAGCTCTTTCTTTTCTCCAACTCTTGGAAAAGTTTCTTATTGATTCATCTTCTTAA MVKEAKAQAKVRVGIETLWKALVKDLRFIIPKLMPNTVEKIELIHGNGGLGSVFLFHLGRGVKIVKIQKERIVELDETKHEFGLEVMEGILLKRGFSSFKTTFKLFSMKEKETLVEVKVVYGTERDDEDEVHMEEVATKPALSFLQLLEKFLIDSSS*
BLAST of Cucsa.074560 vs. Swiss-Prot
Match: PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.5e-27 Identity = 60/156 (38.46%), Postives = 96/156 (61.54%), Query Frame = 1
BLAST of Cucsa.074560 vs. Swiss-Prot
Match: PR13_PETCR (Pathogenesis-related protein B OS=Petroselinum crispum GN=PCPR1-3 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08 Identity = 35/152 (23.03%), Postives = 74/152 (48.68%), Query Frame = 1
BLAST of Cucsa.074560 vs. Swiss-Prot
Match: PR11_PETCR (Pathogenesis-related protein A OS=Petroselinum crispum GN=PCPR1-1 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.4e-08 Identity = 34/152 (22.37%), Postives = 73/152 (48.03%), Query Frame = 1
BLAST of Cucsa.074560 vs. Swiss-Prot
Match: IPRT1_CATRO (Probable intracellular pathogenesis-related protein T1 OS=Catharanthus roseus GN=PCKR3 PE=1 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07 Identity = 28/98 (28.57%), Postives = 51/98 (52.04%), Query Frame = 1
BLAST of Cucsa.074560 vs. Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07 Identity = 34/139 (24.46%), Postives = 66/139 (47.48%), Query Frame = 1
BLAST of Cucsa.074560 vs. TrEMBL
Match: A0A0A0L7W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099770 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 3.9e-80 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of Cucsa.074560 vs. TrEMBL
Match: A0A0A0L2L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099760 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 3.7e-54 Identity = 111/158 (70.25%), Postives = 133/158 (84.18%), Query Frame = 1
BLAST of Cucsa.074560 vs. TrEMBL
Match: M5WW21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014563mg PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 4.7e-33 Identity = 76/156 (48.72%), Postives = 109/156 (69.87%), Query Frame = 1
BLAST of Cucsa.074560 vs. TrEMBL
Match: A0A166AGT8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_009980 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 3.3e-31 Identity = 74/156 (47.44%), Postives = 109/156 (69.87%), Query Frame = 1
BLAST of Cucsa.074560 vs. TrEMBL
Match: M5X3G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017195mg PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 4.4e-31 Identity = 75/155 (48.39%), Postives = 113/155 (72.90%), Query Frame = 1
BLAST of Cucsa.074560 vs. NCBI nr
Match: gi|778676284|ref|XP_011650560.1| (PREDICTED: phytohormone-binding protein-like [Cucumis sativus]) HSP 1 Score: 305.4 bits (781), Expect = 5.6e-80 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of Cucsa.074560 vs. NCBI nr
Match: gi|659102722|ref|XP_008452280.1| (PREDICTED: major pollen allergen Car b 1 isoform 2-like [Cucumis melo]) HSP 1 Score: 301.2 bits (770), Expect = 1.1e-78 Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 1
BLAST of Cucsa.074560 vs. NCBI nr
Match: gi|659102724|ref|XP_008452281.1| (PREDICTED: pathogenesis-related protein 2-like [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55 Identity = 113/159 (71.07%), Postives = 137/159 (86.16%), Query Frame = 1
BLAST of Cucsa.074560 vs. NCBI nr
Match: gi|449463170|ref|XP_004149307.1| (PREDICTED: phytohormone-binding protein-like [Cucumis sativus]) HSP 1 Score: 219.2 bits (557), Expect = 5.3e-54 Identity = 111/158 (70.25%), Postives = 133/158 (84.18%), Query Frame = 1
BLAST of Cucsa.074560 vs. NCBI nr
Match: gi|1009110527|ref|XP_015895979.1| (PREDICTED: phytohormone-binding protein-like [Ziziphus jujuba]) HSP 1 Score: 155.2 bits (391), Expect = 9.3e-35 Identity = 81/157 (51.59%), Postives = 116/157 (73.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |