Cucsa.073030 (gene) Cucumber (Gy14) v1

NameCucsa.073030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMitochondrial import receptor subunit TOM7-1
Locationscaffold00765 : 570946 .. 571665 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGGGTTTATAGGGAATACATTCATTCGCTCAAATCAACCAGAACAAGAGGAAGGTTCCAGCATTTTGCAGAGATCAAATTCTCCCATCAATGGCGTCAAAGGTTTCTCTTAGGAGCAAGGGTAAAAGCTCCAAGTCTTCATCTAAGTCATCTGAGGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCGTCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAACCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGATTTGATTACTTTCTTCCATCATGGATCGGGTTTGTTTTATATGGATGTTTTTGTTGGGGGCTAGTTAGCGTATAAATTTTAGGTAAGTTTGGGTATAATGTTCACATGCTTGAACTACAGAAGACATGTAATAGTTTGAGGTGAAAGTTTTGATCTATTTTTTCTTTTTTATTTCTTCTCAAATATCTGATTTACTTCACCGGTATGAATCTTGGTACGCTTCGTTTTTTCTGAGTATTGTCTGTTTATTCAAATAATTGAACGGTTTTAGGGTTCATTTCCGTTATCTGATCCGTGATCCCTCAAGACTGATATGGGCTGTACTATGAAAAGCCCCATTTTGTAATGCCTGTTTTTCCTTCCTCTTCTTTCAAGTTAATAGGAATTGATCAAGGATTTAGTCACCA

mRNA sequence

TTAGGGTTTATAGGGAATACATTCATTCGCTCAAATCAACCAGAACAAGAGGAAGGTTCCAGCATTTTGCAGAGATCAAATTCTCCCATCAATGGCGTCAAAGGTTTCTCTTAGGAGCAAGGGTAAAAGCTCCAAGTCTTCATCTAAGTCATCTGAGGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCGTCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAACCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGATTTGATTACTTTCTTCCATCATGGATCGGGTTTGTTTTATATGGATGTTTTTGTTGGGGGCTAGTTAGCGTATAAATTTTAGGTAAGTTTGGGTATAATGTTCACATGCTTGAACTACAGAAGACATGTAATAGTTTGAGGTGAAAGTTTTGATCTATTTTTTCTTTTTTATTTCTTCTCAAATATCTGATTTACTTCACCGGTATGAATCTTGGTACGCTTCGTTTTTTCTGAGTATTGTCTGTTTATTCAAATAATTGAACGGTTTTAGGGTTCATTTCCGTTATCTGATCCGTGATCCCTCAAGACTGATATGGGCTGTACTATGAAAAGCCCCATTTTGTAATGCCTGTTTTTCCTTCCTCTTCTTTCAAGTTAATAGGAATTGATCAAGGATTTAGTCACCA

Coding sequence (CDS)

ATGGCGTCAAAGGTTTCTCTTAGGAGCAAGGGTAAAAGCTCCAAGTCTTCATCTAAGTCATCTGAGGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCGTCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAACCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGA

Protein sequence

MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNSEPKPQLSQLLSPV*
BLAST of Cucsa.073030 vs. Swiss-Prot
Match: TOM71_ARATH (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-19
Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 1

Query: 1  MASKVSLR---SKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIG 60
          M S +SL+    KGK SK +S SS++KS     KEWT W++KKAKVVTHYGFIPLVI +G
Sbjct: 1  MESTISLKVNKGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVG 60

Query: 61 MNSEPKPQLSQLLSPV 74
          MNS+PKP L QLLSPV
Sbjct: 61 MNSDPKPHLFQLLSPV 75

BLAST of Cucsa.073030 vs. Swiss-Prot
Match: TOM72_ARATH (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 9.8e-19
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 1

Query: 1  MASKVSLRSKGKSS----KSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIII 60
          MA+K +L+ KGK+      SSS SS   S  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 74
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

BLAST of Cucsa.073030 vs. Swiss-Prot
Match: TOM7A_SOLTU (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 92.4 bits (228), Expect = 2.2e-18
Identity = 45/71 (63.38%), Postives = 53/71 (74.65%), Query Frame = 1

Query: 7  LRSKGKSSKSSSKSSEEKSATQAF----KEWTTWAVKKAKVVTHYGFIPLVIIIGMNSEP 66
          L+ KGK++K ++ + E+  A        KEW TW  KKAKV+THYGFIPLVIIIGMNSEP
Sbjct: 2  LKPKGKNTKKAAAADEDDGAVAVVGKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSEP 61

Query: 67 KPQLSQLLSPV 74
          KP LSQLLSPV
Sbjct: 62 KPSLSQLLSPV 72

BLAST of Cucsa.073030 vs. TrEMBL
Match: A0A0A0LN99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G424720 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.0e-32
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

BLAST of Cucsa.073030 vs. TrEMBL
Match: M5XYQ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014339mg PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-24
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MASKV+L+SKGK++   SK S+E+S  Q+ KEW+TWA+KKAKVVTHYGFIPL+I+IGMNS
Sbjct: 1  MASKVTLKSKGKTTNKGSKGSDERSVAQSVKEWSTWAMKKAKVVTHYGFIPLIIVIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

BLAST of Cucsa.073030 vs. TrEMBL
Match: A0A0D2W5P2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G132400 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-23
Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MAS+VSL++KGK  K S K S+EKS TQ  KEW+TWA+KKAKVVTHYGFIPLVIIIGMNS
Sbjct: 1  MASRVSLKTKGKGGKGS-KGSDEKSTTQCLKEWSTWAMKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQL QLLSPV
Sbjct: 61 EPKPQLYQLLSPV 72

BLAST of Cucsa.073030 vs. TrEMBL
Match: A0A0B0PNP6_GOSAR (Mitochondrial import receptor subunit TOM7-1-like protein OS=Gossypium arboreum GN=F383_10605 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-23
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MAS+VSL++KGK  K S K S++KS TQ  KEW+TWA+KKAKVVTHYGFIPLVIIIGMNS
Sbjct: 1  MASRVSLKTKGKGGKGS-KGSDDKSTTQCLKEWSTWAMKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQL QLLSPV
Sbjct: 61 EPKPQLYQLLSPV 72

BLAST of Cucsa.073030 vs. TrEMBL
Match: A0A0B2NRY8_GLYSO (Mitochondrial import receptor subunit TOM7-1 OS=Glycine soja GN=glysoja_017553 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-23
Identity = 55/73 (75.34%), Postives = 68/73 (93.15%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MAS+VSL++KGKSSK S K++E++SA++  KEWTTWA++KAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASRVSLKAKGKSSKGS-KAAEDRSASECLKEWTTWAMRKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          +PKP LSQLLSPV
Sbjct: 61 DPKPPLSQLLSPV 72

BLAST of Cucsa.073030 vs. TAIR10
Match: AT5G41685.1 (AT5G41685.1 Mitochondrial outer membrane translocase complex, subunit Tom7)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-20
Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 1

Query: 1  MASKVSLR---SKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIG 60
          M S +SL+    KGK SK +S SS++KS     KEWT W++KKAKVVTHYGFIPLVI +G
Sbjct: 1  MESTISLKVNKGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVG 60

Query: 61 MNSEPKPQLSQLLSPV 74
          MNS+PKP L QLLSPV
Sbjct: 61 MNSDPKPHLFQLLSPV 75

BLAST of Cucsa.073030 vs. TAIR10
Match: AT1G64220.1 (AT1G64220.1 translocase of outer membrane 7 kDa subunit 2)

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-20
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 1

Query: 1  MASKVSLRSKGKSS----KSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIII 60
          MA+K +L+ KGK+      SSS SS   S  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 74
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

BLAST of Cucsa.073030 vs. NCBI nr
Match: gi|449468321|ref|XP_004151870.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

BLAST of Cucsa.073030 vs. NCBI nr
Match: gi|659111612|ref|XP_008455820.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-31
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

BLAST of Cucsa.073030 vs. NCBI nr
Match: gi|658011794|ref|XP_008341149.1| (PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Malus domestica])

HSP 1 Score: 122.5 bits (306), Expect = 3.1e-25
Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MAS++SL+SKGK+    SK SEE+S  Q+FKEW+TWA+KKAKVVTHYGFIPLVIIIGMNS
Sbjct: 1  MASRISLKSKGKTPAKPSKGSEERSVAQSFKEWSTWALKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

BLAST of Cucsa.073030 vs. NCBI nr
Match: gi|694388666|ref|XP_009370016.1| (PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Pyrus x bretschneideri])

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-25
Identity = 57/73 (78.08%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MAS++SL+SKGK+    SK SEE+S  Q+FKEW+TWA+KKAKVVTHYGFIP+VIIIGMNS
Sbjct: 1  MASRISLKSKGKTPAKPSKGSEERSVAQSFKEWSTWALKKAKVVTHYGFIPMVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

BLAST of Cucsa.073030 vs. NCBI nr
Match: gi|596287525|ref|XP_007225789.1| (hypothetical protein PRUPE_ppa014339mg [Prunus persica])

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-24
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60
          MASKV+L+SKGK++   SK S+E+S  Q+ KEW+TWA+KKAKVVTHYGFIPL+I+IGMNS
Sbjct: 1  MASKVTLKSKGKTTNKGSKGSDERSVAQSVKEWSTWAMKKAKVVTHYGFIPLIIVIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TOM71_ARATH2.0e-1964.47Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 P... [more]
TOM72_ARATH9.8e-1959.74Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 P... [more]
TOM7A_SOLTU2.2e-1863.38Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3... [more]
Match NameE-valueIdentityDescription
A0A0A0LN99_CUCSA7.0e-32100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G424720 PE=4 SV=1[more]
M5XYQ7_PRUPE1.4e-2475.34Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014339mg PE=4 SV=1[more]
A0A0D2W5P2_GOSRA1.2e-2379.45Uncharacterized protein OS=Gossypium raimondii GN=B456_013G132400 PE=4 SV=1[more]
A0A0B0PNP6_GOSAR2.7e-2378.08Mitochondrial import receptor subunit TOM7-1-like protein OS=Gossypium arboreum ... [more]
A0A0B2NRY8_GLYSO2.7e-2375.34Mitochondrial import receptor subunit TOM7-1 OS=Glycine soja GN=glysoja_017553 P... [more]
Match NameE-valueIdentityDescription
AT5G41685.11.1e-2064.47 Mitochondrial outer membrane translocase complex, subunit Tom7[more]
AT1G64220.15.5e-2059.74 translocase of outer membrane 7 kDa subunit 2[more]
Match NameE-valueIdentityDescription
gi|449468321|ref|XP_004151870.1|1.0e-31100.00PREDICTED: mitochondrial import receptor subunit TOM7-1 [Cucumis sativus][more]
gi|659111612|ref|XP_008455820.1|1.3e-3198.63PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo][more]
gi|658011794|ref|XP_008341149.1|3.1e-2579.45PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Malus domestica][more]
gi|694388666|ref|XP_009370016.1|5.4e-2578.08PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Pyrus x bretschnei... [more]
gi|596287525|ref|XP_007225789.1|2.0e-2475.34hypothetical protein PRUPE_ppa014339mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012621Tom7
Vocabulary: Cellular Component
TermDefinition
GO:0005742mitochondrial outer membrane translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.073030.1Cucsa.073030.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012621Mitochondrial import receptor subunit TOM7PFAMPF08038Tom7coord: 31..70
score: 9.0
NoneNo IPR availablePANTHERPTHR34944FAMILY NOT NAMEDcoord: 1..73
score: 1.0
NoneNo IPR availablePANTHERPTHR34944:SF2MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7-1-RELATEDcoord: 1..73
score: 1.0