Cucsa.069770 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGTATCACATATTATTGATGTTGATTCCTTTGATTCACCAAATGATGCAGTACCTATTAAGGTCAGAAAAAAGTTCAGAACTAAGTCAATAATGAAGAAAACGATTTATATGTTGGCTATGAACAATAGTTTTGAATTTGTTACAGTTAGGTCCAACCACACATCATTTGACATTCAATTCAAAGATCTGTCGTGTTCATGGTATTTACGTGCTTCTGTGTTCAAAAAAGTGATATTTGGATTGTTCGTAAGTTTACAGATACACACCAGTGTGCCGTTAATATTGTTAAAAATGATCGCAGGTAAACATCATCCTGAATTGTTTCTGAGTGTACTACGTCATTTTTtAAATGAATGACAAGATGCATTGATTAGGAATACCCAGGTATAATTTATACATCAAATACTGTGTATTTGCTATTAGATATTTTACTTATTTTGGAAATACATTGTAATTCTAATATAACATTTATTGCATAATTAATAGGAATGTATACAGCTGAAAAATCAGACGATGAAGGTCGATTCAAGTTCTATTTCATGGCCCTTGCAACTTCAATTGATGCATGAAATTATTGTGTGCCAATTATTTCAGTTGATGGTGCAGTGTTAAAGAACAAATATCTTGGTATGTTCATTTCTGCTTGCACTATTGATGGAAATTCTCAAATTGTGCCACTAGTTTTTGTTGTGGTTGAGTCAGAGAATGACTTGTCATGGACATGGTTTTTTCGCAATCTTAAAGTCGTTTTTGGAGAAAGTAAGAAAATGGTAATTGTGTCGAATGCACACAAGAGTATAGAAAATTGGTTTAACCTTGTGTATGAATTAGCGGAGCATGGATTATGTGCATTTCATCTCTATAAGAACTTGAAAAAaCACCATAAGTTGCTTCATATTAGGGAATCATTCCACAGTTGTGCTAGAGCTTATACCATGTTGATGTTTGAGTACTACATGAGAGAACTTGATAATCTCTCTCCATCAATTAGACATGAGTTGGAAGGTATCAGAAAACATAGGTGGGCTATGGCATTTTTTAGGAAAAAGAGATACTCGGTTATTACAACCAATATTTCGGAAAGCACGAATTCTACATTGAAAGAATCTCGAGAATTACACATAATTGGACTTTTAGAATCAATACGTAGTTTGGTTCAAAAGTAGTTCTATGAAAGCCGCACCAAATGAATTTTTCAACGTACGAAACTATCACTACATGCAAAAGATATGATTTGATATTTCTTAAAGGAAAGTCACTCAATGAATATAAGTTTTCTCAGGCCTTAAAAATAGTTGCAATTATTATTTATACACTTATTTGTTAATGACATTTGATTTAACATTTGACAAATATATCTTGTAGATCAACATGAATTTGAAGTCCACCATCGTAAGGAATAATTCATTGTCAATATTTTGGCTCGTACGTGCTCATGTCACCAATGGGACCTTGATTTGATCCCCTGCTCACATGCGGGTATTGCCCTTTCTACAAGGAATCTTAACTTGCATATGTACACTAATAAGTTTTATTCTATTTCAAATTTGATAAACTTGTACAAGAAGACAATACATCCTATTGGTAGTGTAGACCAAATTAAGAAAACATTCCAAGGTGGCAACGGTGGACTTCTTCCGCCCTAG atgtacgtatcacatattattgatgttgattcctttgattcaccaaatgatgcagtacctattaaggtcagaaaaaagttcagaactaagtcaataatgaagaaaacgatttatatgttggctatgaacaatagttttgaatttgttacagttaggtccaaccacacatcatttgacattcaattcaaagatctgtcgtgttcatggtatttacgtgcttctgtgttcaaaaaaGTGATATTTGGATTGTTCGTAAGTTTACAGATACACACCAGTGTGCCGTTAATATTGTTAAAAATGATCGCAGttgatggtgcagtgttaaagaacaaatatcttggtatgttcatttctgcttgcactattgatggaaattctcaaattgtgccactagtttttgttgtggttgagtcagagaatgacttgtcatggacatggttttttcgcaatcttaaagtcgtttttggagaaagtaagaaaatggtaattgtgtcgaatgcacacaagagtataGAAAATTGGTTTAACCTTGTGTATGAATTAGCGGAGCATGGATTATGTGCATTTCATCTCTATAAGAACTTGAAAAAACACCATAAGTTGCTTCATATTAGGGAATCATTCCACAGTTGTGCTAGAGCTTATACCATGTTGATGTTTGAGTACTACATGAGAGAACTTGATAATCTCTCTCCATCAATTAGACATGAGTTGGAAGGTATCAGAAAACATAGGTGGGCTATGGCATTTTTTAGGAAAAAGAGATACTCGGTTattacaaccaatatttcggaaagcacgaattctacattgaaagaatctcgagaattacACATAATTGGACTTTTAGAATCAATACGTAGTTTGGTTCAAAAgaatcttaacttgcatatgtacactaataagttttattctatttcaaatttgataaacttgtacaagaagacaatacatcctattggtagtgtagaccaaattaagaaaacattccaaggtggcaacggtggacttcttccgccctag ATGTACGTATCACATATTATTGATGTTGATTCCTTTGATTCACCAAATGATGCAGTACCTATTAAGGTCAGAAAAAAGTTCAGAACTAAGTCAATAATGAAGAAAACGATTTATATGTTGGCTATGAACAATAGTTTTGAATTTGTTACAGTTAGGTCCAACCACACATCATTTGACATTCAATTCAAAGATCTGTCGTGTTCATGGTATTTACGTGCTTCTGTGTTCAAAAAAGTGATATTTGGATTGTTCGTAAGTTTACAGATACACACCAGTGTGCCGTTAATATTGTTAAAAATGATCGCAGTTGATGGTGCAGTGTTAAAGAACAAATATCTTGGTATGTTCATTTCTGCTTGCACTATTGATGGAAATTCTCAAATTGTGCCACTAGTTTTTGTTGTGGTTGAGTCAGAGAATGACTTGTCATGGACATGGTTTTTTCGCAATCTTAAAGTCGTTTTTGGAGAAAGTAAGAAAATGGTAATTGTGTCGAATGCACACAAGAGTATAGAAAATTGGTTTAACCTTGTGTATGAATTAGCGGAGCATGGATTATGTGCATTTCATCTCTATAAGAACTTGAAAAAaCACCATAAGTTGCTTCATATTAGGGAATCATTCCACAGTTGTGCTAGAGCTTATACCATGTTGATGTTTGAGTACTACATGAGAGAACTTGATAATCTCTCTCCATCAATTAGACATGAGTTGGAAGGTATCAGAAAACATAGGTGGGCTATGGCATTTTTTAGGAAAAAGAGATACTCGGTTATTACAACCAATATTTCGGAAAGCACGAATTCTACATTGAAAGAATCTCGAGAATTACACATAATTGGACTTTTAGAATCAATACGTAGTTTGGTTCAAAAGAATCTTAACTTGCATATGTACACTAATAAGTTTTATTCTATTTCAAATTTGATAAACTTGTACAAGAAGACAATACATCCTATTGGTAGTGTAGACCAAATTAAGAAAACATTCCAAGGTGGCAACGGTGGACTTCTTCCGCCCTAG MYVSHIIDVDSFDSPNDAVPIKVRKKFRTKSIMKKTIYMLAMNNSFEFVTVRSNHTSFDIQFKDLSCSWYLRASVFKKVIFGLFVSLQIHTSVPLILLKMIAVDGAVLKNKYLGMFISACTIDGNSQIVPLVFVVVESENDLSWTWFFRNLKVVFGESKKMVIVSNAHKSIENWFNLVYELAEHGLCAFHLYKNLKKHHKLLHIRESFHSCARAYTMLMFEYYMRELDNLSPSIRHELEGIRKHRWAMAFFRKKRYSVITTNISESTNSTLKESRELHIIGLLESIRSLVQKNLNLHMYTNKFYSISNLINLYKKTIHPIGSVDQIKKTFQGGNGGLLPP*
BLAST of Cucsa.069770 vs. TrEMBL
Match: Q9LTL3_ARATH (Mutator-like transposase OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35 Identity = 81/190 (42.63%), Postives = 110/190 (57.89%), Query Frame = 1
BLAST of Cucsa.069770 vs. TrEMBL
Match: A5C283_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037122 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.1e-34 Identity = 86/219 (39.27%), Postives = 124/219 (56.62%), Query Frame = 1
BLAST of Cucsa.069770 vs. TrEMBL
Match: Q9SLM0_ARATH (Mutator-like transposase OS=Arabidopsis thaliana GN=At2g29230 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 9.1e-34 Identity = 78/190 (41.05%), Postives = 109/190 (57.37%), Query Frame = 1
BLAST of Cucsa.069770 vs. TrEMBL
Match: A5BJQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039715 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 9.1e-34 Identity = 86/254 (33.86%), Postives = 137/254 (53.94%), Query Frame = 1
BLAST of Cucsa.069770 vs. TrEMBL
Match: U5D175_AMBTC (Uncharacterized protein (Fragment) OS=Amborella trichopoda GN=AMTR_s04652p00001680 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33 Identity = 82/205 (40.00%), Postives = 120/205 (58.54%), Query Frame = 1
BLAST of Cucsa.069770 vs. NCBI nr
Match: gi|778730289|ref|XP_011659751.1| (PREDICTED: uncharacterized protein LOC101219435 [Cucumis sativus]) HSP 1 Score: 328.2 bits (840), Expect = 1.7e-86 Identity = 180/305 (59.02%), Postives = 212/305 (69.51%), Query Frame = 1
BLAST of Cucsa.069770 vs. NCBI nr
Match: gi|659111579|ref|XP_008455803.1| (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]) HSP 1 Score: 299.7 bits (766), Expect = 6.6e-78 Identity = 142/193 (73.58%), Postives = 167/193 (86.53%), Query Frame = 1
BLAST of Cucsa.069770 vs. NCBI nr
Match: gi|659111579|ref|XP_008455803.1| (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]) HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18 Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 1
HSP 2 Score: 83.6 bits (205), Expect = 7.5e-13 Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 1
HSP 3 Score: 298.5 bits (763), Expect = 1.5e-77 Identity = 142/193 (73.58%), Postives = 165/193 (85.49%), Query Frame = 1
BLAST of Cucsa.069770 vs. NCBI nr
Match: gi|659087148|ref|XP_008444294.1| (PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 2.6e-74 Identity = 137/185 (74.05%), Postives = 159/185 (85.95%), Query Frame = 1
BLAST of Cucsa.069770 vs. NCBI nr
Match: gi|659087148|ref|XP_008444294.1| (PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo]) HSP 1 Score: 78.2 bits (191), Expect = 3.1e-11 Identity = 65/194 (33.51%), Postives = 94/194 (48.45%), Query Frame = 1
HSP 2 Score: 268.5 bits (685), Expect = 1.6e-68 Identity = 131/187 (70.05%), Postives = 151/187 (80.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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