Cucsa.063230 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.063230
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Zinc finger protein-like protein
Location	scaffold00667 : 91248 .. 92559 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTTAAAAAAaGAGAAGCATGCCATCGATGTGGTTACCCCAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGGTACATACAGAACATTAATAAACTTAGAGTTGAAGTTGTTATTGTATGCTATGAAATTACATAGTTCGTAATCATTAAAATCCTTTCTCATTGACAATCACTCTGAAACATTTTTGTAATCAATAAAAATCCATTTGGATAGTATAAAAGTCGAGTTTCCAAACGTAGTAAACAATCCAACATTAATAAACAATCCAACTTACCAAGTTCGATAATGTTATTTAAATTCATACCAGCACTAAATATGCTAATTTAAAAGTTAATGTTATGCTGTACAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTAAGTTTATATCAATTAAAACTTCTCTGTTTATTTGCCCCTAAAAAGTGGTTAGTAAAATTAACCAGTGGATGGGGTTTAATTTCTTTGTAGGTCACTTGGGTGTGTGATACAATTTTGGGTGCTCTATCTTTCAGGTGGTGCAGTGTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATATATCGTCTTCCTTGGCATCTAATCCCTATCCAAATGCTGCCTTTTTCTTTTTTCTTTTTTCTTTTTAAATGACTAACAACAATAATGTTAAGCCCTTAGAATGATCCTCAATTTAGATATCATGGGTGAAGGCCCATTTTtCCATTCAAGCATTGCAATATAGCTAGCTACTCTCTCTATCTCTCTCTCTAATCGGTGCGCAGAACGGGAACAAACATATCCGAATACTGAATTTGGATGGTCCTTCATGGAATGTCAATGGTTGCTTTATAAACAAAGAATATAATCAAATTGAAATGAGAACTATTAAGGCTTGAACTTAGGTCAGCATAAAGAGCTCTTTCAGATAGAACCAGAAGGTTAAACAGGAGGAAAAGATTGTGAAAGAGAATTGGGGGAATTGTGGGGTATTGATTAAGATTCAGAATCTGTGTGA

mRNA sequence

ATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTTAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCCAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGATTCAGAATCTGTGTGA

Coding sequence (CDS)

ATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTTAAAAAAaGAGAAGCATGCCATCGATGTGGTTACCCCAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGATTCAGAATCTGTGTGA

Protein sequence

MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFDSESV*

Homology

[Close]

BLAST of Cucsa.063230 vs. TrEMBL
Match: A0A0A0LWE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G306810 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-83
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

Query: 121 YASRMECFKCKTPRDF 137
           YASRMECFKCKTPRDF
Sbjct: 190 YASRMECFKCKTPRDF 205

[Close]

BLAST of Cucsa.063230 vs. TrEMBL
Match: G7JVA8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g113840 PE=4 SV=2)

HSP 1 Score: 251.1 bits (640), Expect = 7.8e-64
Identity = 100/136 (73.53%), Postives = 115/136 (84.56%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWS GDW+C  C+++NFKKREAC  CGYPKYGGPDPSTY YN+TE LAGDW+CT+++CG
Sbjct: 1   MSWSGGDWMCGACEHINFKKREACQNCGYPKYGGPDPSTYRYNRTETLAGDWFCTSMNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASR NC+RCGAFK  Y   YG  M+GS  YGSD S PPGWKSGDWICPR+GCG+HN
Sbjct: 61  AHNYASRSNCYRCGAFKDPYSSGYGGNMVGSGGYGSDCSSPPGWKSGDWICPRIGCGIHN 120

Query: 121 YASRMECFKCKTPRDF 137
           YASR EC+KCK PRD+
Sbjct: 121 YASRTECYKCKMPRDY 136

[Close]

BLAST of Cucsa.063230 vs. TrEMBL
Match: I3T8Y2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.6e-62
Identity = 99/139 (71.22%), Postives = 110/139 (79.14%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWS GDW+C  CQ+VNFKKRE C  C YPKYGGPDP+TY YN+TE LAGDWYC+ ++CG
Sbjct: 1   MSWSGGDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASR NC+RCG  +  Y   YG  M GS  YGSD S PPGWK+GDWICPR+GCGVHN
Sbjct: 61  AHNYASRTNCYRCGTMRDDYSSGYGGNMAGSGGYGSDCSFPPGWKNGDWICPRIGCGVHN 120

Query: 121 YASRMECFKCKTPRDFDSE 140
           YASR ECFKCK PRDF  E
Sbjct: 121 YASRAECFKCKMPRDFGGE 139

[Close]

BLAST of Cucsa.063230 vs. TrEMBL
Match: I1KDB1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G216600 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-58
Identity = 94/136 (69.12%), Postives = 110/136 (80.88%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWS GDW+C  CQ++NFKKR+AC  C YPK+GGPDP+TY YN TE LAGDWYCT ++CG
Sbjct: 1   MSWSGGDWMCGACQHINFKKRDACQSCAYPKFGGPDPTTYRYNSTETLAGDWYCTAMNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHN+ASR +CFRCGA K  Y   +G  M GS  YGSD + PPGWK+GDWIC R+GCGVHN
Sbjct: 61  AHNFASRSSCFRCGALKDGYSCRFGGNMDGSGGYGSDCNYPPGWKTGDWICTRIGCGVHN 120

Query: 121 YASRMECFKCKTPRDF 137
           YA+R ECFKCKTPR+F
Sbjct: 121 YANRTECFKCKTPRNF 136

[Close]

BLAST of Cucsa.063230 vs. TrEMBL
Match: A0A0B2RVS5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_043070 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-58
Identity = 94/136 (69.12%), Postives = 110/136 (80.88%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWS GDW+C  CQ++NFKKR+AC  C YPK+GGPDP+TY YN TE LAGDWYCT ++CG
Sbjct: 1   MSWSGGDWMCGACQHINFKKRDACQSCAYPKFGGPDPTTYRYNSTETLAGDWYCTAMNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHN+ASR +CFRCGA K  Y   +G  M GS  YGSD + PPGWK+GDWIC R+GCGVHN
Sbjct: 61  AHNFASRSSCFRCGALKDGYSCRFGGNMDGSGGYGSDCNYPPGWKTGDWICTRIGCGVHN 120

Query: 121 YASRMECFKCKTPRDF 137
           YA+R ECFKCKTPR+F
Sbjct: 121 YANRTECFKCKTPRNF 136

[Close]

BLAST of Cucsa.063230 vs. TAIR10
Match: AT2G26695.1 (AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 213.8 bits (543), Expect = 7.0e-56
Identity = 89/138 (64.49%), Postives = 109/138 (78.99%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSW+ GDW+C  CQ+ NFKKRE+C +CGYPK+GG D STY YN+TE +AGDWYC  ++CG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-ASIPPGWKSGDWICPRMGCGV 120
           +HNYASR +C+RCG  K  Y    YGA M+    YG+D A+ PPGWK+GDW+CPR+GCGV
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVA---YGNDGAACPPGWKTGDWVCPRVGCGV 120

Query: 121 HNYASRMECFKCKTPRDF 137
           HNYASR ECFKCKT RD+
Sbjct: 121 HNYASRAECFKCKTTRDY 135

[Close]

BLAST of Cucsa.063230 vs. TAIR10
Match: AT3G15680.1 (AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 2.9e-33
Identity = 66/158 (41.77%), Postives = 89/158 (56.33%), Query Frame = 1


Query: 6   GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEALAGD 65
           GDW C  C ++NF++R++C RCG             +  +GG   S + +   ++   GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 66  WYCTTVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMGSDQYGSD--ASIPPG----- 125
           WYCT  +CG HN+ASR  CF+CG FK     G  G  + G   + +D   S  PG     
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

Query: 126 -WKSGDWICPRMGCGVHNYASRMECFKCKTPRDFDSES 141
            WKSGDWIC R+GC  HN+ASRMECF+C  PRDF + +
Sbjct: 125 SWKSGDWICTRIGCNEHNFASRMECFRCNAPRDFSNRT 162

[Close]

BLAST of Cucsa.063230 vs. TAIR10
Match: AT5G25490.1 (AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 6.0e-31
Identity = 60/163 (36.81%), Postives = 84/163 (51.53%), Query Frame = 1


Query: 6   GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEALAGDW 65
           GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +   GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 66  YCTTVSCGAHNYASRPNCFRCGAFKSVYPGDY----------------GAYMMGSDQYGS 125
           YC    CG HN+A+R +CF+CGA K  +                    G +  G    G 
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

Query: 126 DASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFDSE 140
             +    WKSGDWICPR GC  HN+ASR ECF+C  P++  +E
Sbjct: 125 GGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPKELATE 167

[Close]

BLAST of Cucsa.063230 vs. TAIR10
Match: AT2G17975.1 (AT2G17975.1 zinc finger (Ran-binding) family protein)

HSP 1 Score: 61.2 bits (147), Expect = 5.8e-10
Identity = 42/145 (28.97%), Postives = 65/145 (44.83%), Query Frame = 1


Query: 3   WSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAH 62
           W +GDWIC  C   N+  R  C +C       P         +EALA +W    ++ G  
Sbjct: 126 WRSGDWICR-CGFHNYSSRIQCKKCNEI---APLALGTKRLASEALAHEWDSKRLNQGYT 185

Query: 63  NYASRPNCFRCGAFKSVYPGDYGAYMMGS---DQYGSDASIPPG---WKSGDWICPRMGC 122
           +  ++   +   +F  +  G    + +      Q+ + A +  G   W+ GDW+C    C
Sbjct: 186 SMQTQSAIY--ASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCTN--C 245

Query: 123 GVHNYASRMECFKCKTPRDFDSESV 142
             HNYASR EC +CKT RD   + +
Sbjct: 246 KNHNYASRAECNRCKTTRDILDQDI 262

HSP 2 Score: 35.0 bits (79), Expect = 4.5e-02
Identity = 15/30 (50.00%), Postives = 18/30 (60.00%), Query Frame = 1


Query: 105 KSGDWICPRMGCGVHNYASRMECFKCKTPR 135
           + GDW C  +GC   NYA R  C +CK PR
Sbjct: 5   REGDWEC--LGCRNRNYAFRSFCNRCKQPR 32

[Close]

BLAST of Cucsa.063230 vs. TAIR10
Match: AT1G48570.1 (AT1G48570.1 zinc finger (Ran-binding) family protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.9e-09
Identity = 40/129 (31.01%), Postives = 51/129 (39.53%), Query Frame = 1


Query: 6   GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYA 65
           GDW+C  C  +NF + ++C +C   K  GP   T   N  E   GDW CT   CG  N+A
Sbjct: 338 GDWLCPECSFLNFTRNQSCLKC---KAKGP-KKTSMVNIVEMKKGDWNCT--GCGYMNFA 397

Query: 66  SRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRM 125
           S   C  C                  +Q     + P     GDW CP   C   N+    
Sbjct: 398 SNKQCREC-----------------REQRHKTLAEP-----GDWECP--SCDFVNFRRND 436

Query: 126 ECFKCKTPR 135
            C KC+  R
Sbjct: 458 ACKKCECKR 436

[Close]

BLAST of Cucsa.063230 vs. NCBI nr
Match: gi|659130144|ref|XP_008465021.1| (PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-83
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 121 YASRMECFKCKTPRDF 137
           YASRMECFKCKTPRDF
Sbjct: 121 YASRMECFKCKTPRDF 136

[Close]

BLAST of Cucsa.063230 vs. NCBI nr
Match: gi|778660442|ref|XP_011656267.1| (PREDICTED: uncharacterized protein LOC101212261 isoform X1 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-83
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

Query: 121 YASRMECFKCKTPRDF 137
           YASRMECFKCKTPRDF
Sbjct: 190 YASRMECFKCKTPRDF 205

[Close]

BLAST of Cucsa.063230 vs. NCBI nr
Match: gi|778660445|ref|XP_004150016.2| (PREDICTED: uncharacterized protein LOC101212261 isoform X2 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-83
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

Query: 121 YASRMECFKCKTPRDF 137
           YASRMECFKCKTPRDF
Sbjct: 190 YASRMECFKCKTPRDF 205

[Close]

BLAST of Cucsa.063230 vs. NCBI nr
Match: gi|659130140|ref|XP_008465019.1| (PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-83
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 121 YASRMECFKCKTPRDF 137
           YASRMECFKCKTPRDF
Sbjct: 121 YASRMECFKCKTPRDF 136

[Close]

BLAST of Cucsa.063230 vs. NCBI nr
Match: gi|922363832|ref|XP_003609267.2| (zinc finger (Ran-binding) family protein [Medicago truncatula])

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-63
Identity = 100/136 (73.53%), Postives = 115/136 (84.56%), Query Frame = 1


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWS GDW+C  C+++NFKKREAC  CGYPKYGGPDPSTY YN+TE LAGDW+CT+++CG
Sbjct: 1   MSWSGGDWMCGACEHINFKKREACQNCGYPKYGGPDPSTYRYNRTETLAGDWFCTSMNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASR NC+RCGAFK  Y   YG  M+GS  YGSD S PPGWKSGDWICPR+GCG+HN
Sbjct: 61  AHNYASRSNCYRCGAFKDPYSSGYGGNMVGSGGYGSDCSSPPGWKSGDWICPRIGCGIHN 120

Query: 121 YASRMECFKCKTPRDF 137
           YASR EC+KCK PRD+
Sbjct: 121 YASRTECYKCKMPRDY 136

The following BLAST results are available for this feature:

BLAST of Cucsa.063230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWE1_CUCSA	1.2e-83	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G306810 PE=4 SV=1	[more]
G7JVA8_MEDTR	7.8e-64	73.53	Uncharacterized protein OS=Medicago truncatula GN=MTR_4g113840 PE=4 SV=2	[more]
I3T8Y2_LOTJA	9.6e-62	71.22	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
I1KDB1_SOYBN	1.7e-58	69.12	Uncharacterized protein OS=Glycine max GN=GLYMA_06G216600 PE=4 SV=1	[more]
A0A0B2RVS5_GLYSO	1.7e-58	69.12	Uncharacterized protein OS=Glycine soja GN=glysoja_043070 PE=4 SV=1	[more]

BLAST of Cucsa.063230 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26695.1	7.0e-56	64.49	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	2.9e-33	41.77	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	6.0e-31	36.81	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	5.8e-10	28.97	zinc finger (Ran-binding) family protein	[more]
AT1G48570.1	2.9e-09	31.01	zinc finger (Ran-binding) family protein	[more]

BLAST of Cucsa.063230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130144\|ref\|XP_008465021.1\|	1.7e-83	100.00	PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X2 [...	[more]
gi\|778660442\|ref\|XP_011656267.1\|	1.7e-83	100.00	PREDICTED: uncharacterized protein LOC101212261 isoform X1 [Cucumis sativus]	[more]
gi\|778660445\|ref\|XP_004150016.2\|	1.7e-83	100.00	PREDICTED: uncharacterized protein LOC101212261 isoform X2 [Cucumis sativus]	[more]
gi\|659130140\|ref\|XP_008465019.1\|	1.7e-83	100.00	PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X1 [...	[more]
gi\|922363832\|ref\|XP_003609267.2\|	1.1e-63	73.53	zinc finger (Ran-binding) family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001876	Znf_RanBP2

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.063230.1	Cucsa.063230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	GENE3D	G3DSA:4.10.1060.10		coord: 43..78 score: 1.4E-13coord: 2..31 score: 1.3E-13coord: 102..135 score: 3.8
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 49..77 score: 6.2E-7coord: 4..32 score: 2.5E-7coord: 105..134 score: 4.
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 50..76 score: 1.3E-4coord: 107..133 score: 2.7E-8coord: 6..30 score: 3.
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 8..27 score: -coord: 109..130 score: -coord: 52..73 scor
IPR001876	Zinc finger, RanBP2-type	PROFILE	PS50199	ZF_RANBP2_2	coord: 48..79 score: 9.145coord: 105..136 score: 10.139coord: 4..33 score: 9
IPR001876	Zinc finger, RanBP2-type	unknown	SSF90209	Ran binding protein zinc finger-like	coord: 45..78 score: 2.43E-10coord: 101..137 score: 1.41E-11coord: 2..34 score: 3.5
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..141 score: 6.3
None	No IPR available	PANTHER	PTHR23111:SF41	SUBFAMILY NOT NAMED	coord: 1..141 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.063230	Cla012266	Watermelon (97103) v1	cgywmB055
Cucsa.063230	Csa1G306810	Cucumber (Chinese Long) v2	cgycuB050
Cucsa.063230	MELO3C026642	Melon (DHL92) v3.5.1	cgymeB053
Cucsa.063230	ClCG06G010900	Watermelon (Charleston Gray)	cgywcgB055
Cucsa.063230	CSPI01G18610	Wild cucumber (PI 183967)	cgycpiB050
Cucsa.063230	CmaCh10G005640	Cucurbita maxima (Rimu)	cgycmaB0092
Cucsa.063230	CmoCh10G006070	Cucurbita moschata (Rifu)	cgycmoB0087
Cucsa.063230	Lsi06G009460	Bottle gourd (USVL1VR-Ls)	cgylsiB053
Cucsa.063230	Cp4.1LG18g04690	Cucurbita pepo (Zucchini)	cgycpeB0087
Cucsa.063230	MELO3C026642.2	Melon (DHL92) v3.6.1	cgymedB052
Cucsa.063230	CsaV3_1G029820	Cucumber (Chinese Long) v3	cgycucB052
Cucsa.063230	Cla97C06G120120	Watermelon (97103) v2	cgywmbB054
Cucsa.063230	Bhi02G000866	Wax gourd	cgywgoB056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None