Cucsa.056310 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.056310
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Protein kish
Location	scaffold00602 : 457675 .. 460186 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCAGTCGGGAGTTGTTCGCCGCTGCTCAAAACCTCGGCTATTGGGAGGTCAAGAAGTTCCTTTCCTCTTCTTCTTTCCTTTCCGAAGGCTTCCGATCTGACAATCTCTTGCCACTTGAATAGGACCCCCGCTTTCTTTTCTTAATCTCCATTTCTGCACTTTTGGTAAGTTTTCTGTGATTTTCTTGGATTACTGATTTCGATGTTATTGGATTTTTGCGCTTTAGTTGAATTTAGGTTTTTGGATTCATGGGTTTGAATAGATTGCTTCATGGGGGTATTGGGAGATTCGGATCTTTGTTATAGAAAGTTAATGCTTTAACATTGTTTTGTTCTCTATCACCGATTTGTGAATCGAATTCGAGGTTAAAACCTCAAGATTTTGATTTGTATCTGTAACCACATTTTGTTGTAATTTCTACACAGTGATAGTTTTGTTTAACTCTGTTGTGACGACCTTACATCTCGTTAGATACTTCGGAGTCGTGTTTTGAATTTCCTAGTAATTGAAGAGTTAATTTTGTTTGCTCTATATTTTCGAATTATTAGAAATGGTTGTTGTTAATTCCTGATTTTAGTTGTAATCGTGGATAACTGTGGATGTGCTATGATCGAACTTCATTTTGGTCCGTTGCTAACTTGTTTTTAACCTATTTCTAGATTGAATTGAAAGAGGATTGTTAACGTGATTAATACCTGGAAATTTGAACATGGTAAATGATCCTTGTCTTTGGTGTTTGGACTATGGATGTTTTCATAGTTTGGATAAATAGAGGAGATACTAATGACTAACATGGTTGTTTTTGGTTTTTCAGTCGGCTCTGTTCAATTTTCATTCCTTTCTGACAGTAATCCTCCTGGGAATTTGTACATGTACCTATGTGAAGATGCATTTTCCTGCTATTCTTGAGCAAAGAAATGGGTACTTCCTTCTTGTCTCTTTTTCCATAAACTGCATTGAGATAGATATGGAAAATCAGGTCTAGCATGTCGTGTTTTTATTTTCCATTTCATATTGTTACTTTCCTTTTCTTATTCCTACATGTTTGGAGTTAATTTGATACTTGGAAATACCCCGATTCTTTCTTTTACATCGTATATTTGAATTTCCTACATATGTTGGTTCATTGTAAGCACATTGGTTATCATGGTGGAGTATTAATCACTGACTCGGTTTTTGGCTAGATTTCATGTTTTCCTTTGGGCTTCGATTTTGAAGCACTTTTGTAATTACTCTATAAGTAACATTTTAGTTAGTTGGTCCCTCTTCTGTTAGTCAGGGTCTTTTGGTGGGCTGTTTTTTTTTTTTTGTATGTCCTTGTATTCTTTCATTCTTTCTCAATGAAAGCTGTTTGGTTCATCAAAAAAAAAAATCACTGACTTGTTTGTTCTTGCTGTGCAAAATCATTACCTCTTAATTTCAAAATAAATGCACATTACAAATTCCATATAGTTTTTAATTGAGTTGTTTGTCTGACAGGTTCCGTGGCTTCTTTTGGAAAGCAGCCAGAATAGGTAGGATTCTTGATTAACCTTGCGCATTTTTTTTACAACCCTGAATCTTTTGCTGGAACAATTTATGAGATATAGAAGAGCTGTTGGAATCTGAACTCTTTCTTTCTTCTCTTTGTTTCTTCCAGCATTTCTTTCTCTTTATGGGGCTGTATTTTCGATGCCAGCAATTATACTCATTGATCTGATCACTTGACTTCCATTTCTCTCAAACTGTATCATTGGTCAATAACGTATCTTAGAAATCTCTCTTTAACAAATAATCAATCATAAGGCTTCTTTGGGAGATAGAAACCTGTTCTGGCAGAGTTCAATTGTATCTCAAATGCACGTTCTTTCTTTGTTTGATGATTTTCTCGGAAATGGAGAGTTTGTCCTACTAAAGAAGTAATTAGTTTCTTATTTGAATAATAACAGTATTGTGTTGGCCTTTTAGATTTCTAGCGATCATTGATCAGCAGGCTGTCATTGTCCATATTAGTATTTATATACACAAAAATCATGTAAGAGAGTAAATGAAGGAAAGAAATGCAATTATAGTTAAACATATGACAATTAGTATGACATAGTTTTTATTGCCAATTAAAACAAAGCATTATTATCTGACGGGATGATGTGCTGGTTTGTGATTCAGGTGAACGTTTGAGTCCTTGGGTAGCTGTGGGATGCTTCTCAATGGGAGTCTCAATAATTTTCTTCTGACCTATGCCTATATTCCCTTCTGATATATTTAGCATGTCGTGCCTTACAGTCTTATTTTAGCAAGAGGGCTTTTGAAATTAGAGTTCTGTAGTAACATGGTTGAAAGCTGTTTAAATCCATTATTACACGAGCATTCCATTACAATTTATTTTGTTTGCTATGCAGTCTCAGAAATGTCAGAAAGGTAGATCATTGTTGTGTTACTTTTTCAGGTTCTTATTAGAAAGCAAACGAGATATTGTTGTTGGTTGGTCACATGATGGACAAACACAAACCAAATTTGGAAATATGTTTCAT

mRNA sequence

TCTCAGTCGGGAGTTGTTCGCCGCTGCTCAAAACCTCGGCTATTGGGAGGTCAAGAAGTTCCTTTCCTCTTCTTCTTTCCTTTCCGAAGGCTTCCGATCTGACAATCTCTTGCCACTTGAATAGGACCCCCGCTTTCTTTTCTTAATCTCCATTTCTGCACTTTTGATTGAATTGAAAGAGGATTGTTAACGTGATTAATACCTGGAAATTTGAACATGTCGGCTCTGTTCAATTTTCATTCCTTTCTGACAGTAATCCTCCTGGGAATTTGTACATGTACCTATGTGAAGATGCATTTTCCTGCTATTCTTGAGCAAAGAAATGGGTTCCGTGGCTTCTTTTGGAAAGCAGCCAGAATAGGTGAACGTTTGAGTCCTTGGGTAGCTGTGGGATGCTTCTCAATGGGAGTCTCAATAATTTTCTTCTGACCTATGCCTATATTCCCTTCTGATATATTTAGCATGTCGTGCCTTACAGTCTTATTTTAGCAAGAGGGCTTTTGAAATTAGAGTTCTGTAGTAACATGGTTGAAAGCTGTTTAAATCCATTATTACACGAGCATTCCATTACAATTTATTTTGTTTGCTATGCAGTCTCAGAAATGTCAGAAAGGTAGATCATTGTTGTGTTACTTTTTCAGGTTCTTATTAGAAAGCAAACGAGATATTGTTGTTGGTTGGTCACATGATGGACAAACACAAACCAAATTTGGAAATATGTTTCAT

Coding sequence (CDS)

ATGTCGGCTCTGTTCAATTTTCATTCCTTTCTGACAGTAATCCTCCTGGGAATTTGTACATGTACCTATGTGAAGATGCATTTTCCTGCTATTCTTGAGCAAAGAAATGGGTTCCGTGGCTTCTTTTGGAAAGCAGCCAGAATAGGTGAACGTTTGAGTCCTTGGGTAGCTGTGGGATGCTTCTCAATGGGAGTCTCAATAATTTTCTTCTGA

Protein sequence

MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGCFSMGVSIIFF*

Homology

[Close]

BLAST of Cucsa.056310 vs. Swiss-Prot
Match: KISH_DROME (Protein kish OS=Drosophila melanogaster GN=ksh PE=3 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-17
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQ-RNGFRGFFWKAARIGERLSPWVAVG 60
          MSALFNFHS L+VILL ICTC Y++  FP+++++ + GF G FWK ARIGER SPWV   
Sbjct: 1  MSALFNFHSLLSVILLLICTCAYLRSLFPSLIDRNKTGFMGTFWKLARIGERKSPWVGAA 60

Query: 61 CFSMGVSIIFF 71
          C  M  +++F+
Sbjct: 61 CLIMAFTVLFW 71

[Close]

BLAST of Cucsa.056310 vs. Swiss-Prot
Match: KISHA_MOUSE (Protein kish-A OS=Mus musculus GN=Tmem167a PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.7e-16
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQ-RNGFRGFFWKAARIGERLSPWVAVG 60
          MSA+FNF S LTVILL ICTC Y++   P+IL++ + G  G FWK ARIGER SP+VA+ 
Sbjct: 1  MSAIFNFQSLLTVILLLICTCAYIRSLAPSILDRNKTGLLGIFWKCARIGERKSPYVAIC 60

Query: 61 CFSMGVSIIF 70
          C  M  SI+F
Sbjct: 61 CIVMAFSILF 70

[Close]

BLAST of Cucsa.056310 vs. Swiss-Prot
Match: KISHA_HUMAN (Protein kish-A OS=Homo sapiens GN=TMEM167A PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 9.7e-16
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILE-QRNGFRGFFWKAARIGERLSPWVAVG 60
          MSA+FNF S LTVILL ICTC Y++   P++L+  + G  G FWK ARIGER SP+VAV 
Sbjct: 1  MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60

Query: 61 CFSMGVSIIF 70
          C  M  SI+F
Sbjct: 61 CIVMAFSILF 70

[Close]

BLAST of Cucsa.056310 vs. Swiss-Prot
Match: KISHA_PONAB (Protein kish-A OS=Pongo abelii GN=TMEM167A PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 9.7e-16
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILE-QRNGFRGFFWKAARIGERLSPWVAVG 60
          MSA+FNF S LTVILL ICTC Y++   P++L+  + G  G FWK ARIGER SP+VAV 
Sbjct: 1  MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60

Query: 61 CFSMGVSIIF 70
          C  M  SI+F
Sbjct: 61 CIVMAFSILF 70

[Close]

BLAST of Cucsa.056310 vs. Swiss-Prot
Match: KISHA_BOVIN (Protein kish-A OS=Bos taurus GN=TMEM167A PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 9.7e-16
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILE-QRNGFRGFFWKAARIGERLSPWVAVG 60
          MSA+FNF S LTVILL ICTC Y++   P++L+  + G  G FWK ARIGER SP+VAV 
Sbjct: 1  MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60

Query: 61 CFSMGVSIIF 70
          C  M  SI+F
Sbjct: 61 CIVMAFSILF 70

[Close]

BLAST of Cucsa.056310 vs. TrEMBL
Match: A0A0A0KGV9_CUCSA (Protein kish OS=Cucumis sativus GN=Csa_6G365220 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-33
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC
Sbjct: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60

Query: 61 FSMGVSIIFF 71
          FSMGVSIIFF
Sbjct: 61 FSMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. TrEMBL
Match: B9HKZ8_POPTR (Protein kish OS=Populus trichocarpa GN=POPTR_0008s17680g PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-32
Identity = 67/70 (95.71%), Postives = 70/70 (100.00%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LLGICTCT+VKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC
Sbjct: 1  MSALFNFHSFLTVVLLGICTCTFVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60

Query: 61 FSMGVSIIFF 71
          F+MGVSIIFF
Sbjct: 61 FTMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. TrEMBL
Match: A0A068VH25_COFCA (Protein kish OS=Coffea canephora GN=GSCOC_T00009972001 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 5.2e-32
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LLGICTCTYVKMHFPA+LEQR GFRGFFWKAARIGERLSPWVAVGC
Sbjct: 10 MSALFNFHSFLTVVLLGICTCTYVKMHFPALLEQRTGFRGFFWKAARIGERLSPWVAVGC 69

Query: 61 FSMGVSIIFF 71
          F MGVSIIFF
Sbjct: 70 FMMGVSIIFF 79

[Close]

BLAST of Cucsa.056310 vs. TrEMBL
Match: A0A0J8C625_BETVU (Protein kish OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151120 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-31
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LL ICTCTY+KMHFPAILEQR GFRGFFWKAARIGERLSPWVAVGC
Sbjct: 1  MSALFNFHSFLTVVLLAICTCTYIKMHFPAILEQRTGFRGFFWKAARIGERLSPWVAVGC 60

Query: 61 FSMGVSIIFF 71
          F+MGVSIIFF
Sbjct: 61 FTMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. TrEMBL
Match: A0A059D903_EUCGR (Protein kish OS=Eucalyptus grandis GN=EUGRSUZ_B03471 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-31
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LL ICTCTYVKMHFPAILEQR GFRGFFWKAARIGERLSPWVA+GC
Sbjct: 1  MSALFNFHSFLTVVLLVICTCTYVKMHFPAILEQRTGFRGFFWKAARIGERLSPWVAIGC 60

Query: 61 FSMGVSIIFF 71
          FSMGVSIIFF
Sbjct: 61 FSMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. TAIR10
Match: AT5G20165.3 (AT5G20165.3 unknown protein)

HSP 1 Score: 80.1 bits (196), Expect = 6.1e-16
Identity = 45/80 (56.25%), Postives = 48/80 (60.00%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNG----------------------- 57
          MSALFNFHSFLTV+LL ICTCTY+KM FPAILEQ+ G                       
Sbjct: 1  MSALFNFHSFLTVVLLVICTCTYLKMQFPAILEQKTGIVFCQIKDALSDFSAYCYFRLQM 60

[Close]

BLAST of Cucsa.056310 vs. NCBI nr
Match: gi|449452893|ref|XP_004144193.1| (PREDICTED: protein kish isoform X1 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-33
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC
Sbjct: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60

Query: 61 FSMGVSIIFF 71
          FSMGVSIIFF
Sbjct: 61 FSMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. NCBI nr
Match: gi|224102301|ref|XP_002312629.1| (hypothetical protein POPTR_0008s17680g [Populus trichocarpa])

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-32
Identity = 67/70 (95.71%), Postives = 70/70 (100.00%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LLGICTCT+VKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC
Sbjct: 1  MSALFNFHSFLTVVLLGICTCTFVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60

Query: 61 FSMGVSIIFF 71
          F+MGVSIIFF
Sbjct: 61 FTMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. NCBI nr
Match: gi|1000975302|ref|XP_015572127.1| (PREDICTED: protein kish [Ricinus communis])

HSP 1 Score: 146.0 bits (367), Expect = 2.5e-32
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LLGICTCTYVKMHFPAILEQR GFRGFFWKAARIGERLSPWVAVGC
Sbjct: 1  MSALFNFHSFLTVVLLGICTCTYVKMHFPAILEQRTGFRGFFWKAARIGERLSPWVAVGC 60

Query: 61 FSMGVSIIFF 71
          F+MGVSIIFF
Sbjct: 61 FTMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. NCBI nr
Match: gi|802724233|ref|XP_012085657.1| (PREDICTED: protein kish [Jatropha curcas])

HSP 1 Score: 144.4 bits (363), Expect = 7.4e-32
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LLGICTCTYVKMHFPAILEQR GFRGFFWKAARIGERLSPWVA GC
Sbjct: 1  MSALFNFHSFLTVVLLGICTCTYVKMHFPAILEQRTGFRGFFWKAARIGERLSPWVAAGC 60

Query: 61 FSMGVSIIFF 71
          F+MGVSIIFF
Sbjct: 61 FTMGVSIIFF 70

[Close]

BLAST of Cucsa.056310 vs. NCBI nr
Match: gi|661875774|emb|CDP19897.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 144.4 bits (363), Expect = 7.4e-32
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 1


Query: 1  MSALFNFHSFLTVILLGICTCTYVKMHFPAILEQRNGFRGFFWKAARIGERLSPWVAVGC 60
          MSALFNFHSFLTV+LLGICTCTYVKMHFPA+LEQR GFRGFFWKAARIGERLSPWVAVGC
Sbjct: 10 MSALFNFHSFLTVVLLGICTCTYVKMHFPALLEQRTGFRGFFWKAARIGERLSPWVAVGC 69

Query: 61 FSMGVSIIFF 71
          F MGVSIIFF
Sbjct: 70 FMMGVSIIFF 79

The following BLAST results are available for this feature:

BLAST of Cucsa.056310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KISH_DROME	1.4e-17	56.34	Protein kish OS=Drosophila melanogaster GN=ksh PE=3 SV=2	[more]
KISHA_MOUSE	5.7e-16	58.57	Protein kish-A OS=Mus musculus GN=Tmem167a PE=1 SV=1	[more]
KISHA_HUMAN	9.7e-16	58.57	Protein kish-A OS=Homo sapiens GN=TMEM167A PE=1 SV=1	[more]
KISHA_PONAB	9.7e-16	58.57	Protein kish-A OS=Pongo abelii GN=TMEM167A PE=3 SV=1	[more]
KISHA_BOVIN	9.7e-16	58.57	Protein kish-A OS=Bos taurus GN=TMEM167A PE=3 SV=1	[more]

BLAST of Cucsa.056310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGV9_CUCSA	1.2e-33	100.00	Protein kish OS=Cucumis sativus GN=Csa_6G365220 PE=3 SV=1	[more]
B9HKZ8_POPTR	1.0e-32	95.71	Protein kish OS=Populus trichocarpa GN=POPTR_0008s17680g PE=3 SV=1	[more]
A0A068VH25_COFCA	5.2e-32	94.29	Protein kish OS=Coffea canephora GN=GSCOC_T00009972001 PE=3 SV=1	[more]
A0A0J8C625_BETVU	1.2e-31	92.86	Protein kish OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151120 PE=3 SV=1	[more]
A0A059D903_EUCGR	1.2e-31	94.29	Protein kish OS=Eucalyptus grandis GN=EUGRSUZ_B03471 PE=3 SV=1	[more]

BLAST of Cucsa.056310 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20165.3	6.1e-16	56.25	unknown protein	[more]

BLAST of Cucsa.056310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452893\|ref\|XP_004144193.1\|	1.8e-33	100.00	PREDICTED: protein kish isoform X1 [Cucumis sativus]	[more]
gi\|224102301\|ref\|XP_002312629.1\|	1.5e-32	95.71	hypothetical protein POPTR_0008s17680g [Populus trichocarpa]	[more]
gi\|1000975302\|ref\|XP_015572127.1\|	2.5e-32	95.71	PREDICTED: protein kish [Ricinus communis]	[more]
gi\|802724233\|ref\|XP_012085657.1\|	7.4e-32	94.29	PREDICTED: protein kish [Jatropha curcas]	[more]
gi\|661875774\|emb\|CDP19897.1\|	7.4e-32	94.29	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009653	Ksh1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.056310.1	Cucsa.056310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009653	Protein kish	PANTHER	PTHR13229	FAMILY NOT NAMED	coord: 1..70 score: 2.7
IPR009653	Protein kish	PFAM	PF06842	DUF1242	coord: 10..43 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.056310	Csa6G365220	Cucumber (Chinese Long) v2	cgycuB041
Cucsa.056310	ClCG08G010140	Watermelon (Charleston Gray)	cgywcgB046
Cucsa.056310	CmaCh12G000690	Cucurbita maxima (Rimu)	cgycmaB0072
Cucsa.056310	CmaCh05G004290	Cucurbita maxima (Rimu)	cgycmaB0074
Cucsa.056310	CmoCh12G000530	Cucurbita moschata (Rifu)	cgycmoB0067
Cucsa.056310	CmoCh05G004490	Cucurbita moschata (Rifu)	cgycmoB0069
Cucsa.056310	Lsi08G008730	Bottle gourd (USVL1VR-Ls)	cgylsiB045
Cucsa.056310	Cp4.1LG11g03720	Cucurbita pepo (Zucchini)	cgycpeB0068
Cucsa.056310	Cp4.1LG07g00370	Cucurbita pepo (Zucchini)	cgycpeB0070
Cucsa.056310	MELO3C030289.2	Melon (DHL92) v3.6.1	cgymedB040
Cucsa.056310	CsaV3_6G032330	Cucumber (Chinese Long) v3	cgycucB044
Cucsa.056310	Cla97C08G152980	Watermelon (97103) v2	cgywmbB045
Cucsa.056310	Carg20456	Silver-seed gourd	carcgyB0696

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None