Cucsa.054670 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.054670
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionKinesin-like protein
Locationscaffold00585 : 223509 .. 223853 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCACTGTGATTAATTGTAAATATTATTTTTTTTtATCTATCCTTCTGTTTCTAAATATATGTATACCATATTATAATAACATTATGAAATATTTAACAATGTCTTCAAATTTTTtAAGCAACAATTTTTGCATACGGGCAAACAAGCAGTGGAAAAACTTTCACAATGAATGGTGTCACTCAATATTCTGTGGCAGGCATTTATAGTTACATAGAGTCGGTGAGTTTCAGATTTATAGATAGATGTACGATATTTCAATAGAAATTTAATACGTCATTGTCTAATATGACTTAGTTTGTGGATGATAGCATCAAGACAGAGAATTTGTGCTGAAGCTTTCA

mRNA sequence

ATGGTCACTGTGattaattCAACAATTTTTGCATACGGGCAAACAAGCAGTGGAAAAACTTTCACAATGAATGGTGTCACTCAATATTCTGTGGCAGGCATTTATAGTTACATAGAGTCGCATCAAGACAGAGAATTTGTGCTGAAGCTTTCA

Coding sequence (CDS)

ATGGTCACTGTGATTAATTCAACAATTTTTGCATACGGGCAAACAAGCAGTGGAAAAACTTTCACAATGAATGGTGTCACTCAATATTCTGTGGCAGGCATTTATAGTTACATAGAGTCGCATCAAGACAGAGAATTTGTGCTGAAGCTTTCA

Protein sequence

MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS
Homology
[Close]
BLAST of Cucsa.054670 vs. Swiss-Prot
Match: KN7H_ORYSJ (Kinesin-like protein KIN-7H OS=Oryza sativa subsp. japonica GN=KIN7H PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-13
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ INS+IFAYGQTSSGKT+TM G+T+YSV  IY YIE H +REF+L+ S
Sbjct: 93  VVSGINSSIFAYGQTSSGKTYTMTGITEYSVLDIYDYIEKHPEREFILRFS 143

[Close]
BLAST of Cucsa.054670 vs. Swiss-Prot
Match: KN7C_ORYSJ (Kinesin-like protein KIN-7C OS=Oryza sativa subsp. japonica GN=KIN7C PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.5e-13
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ INS+IFAYGQTSSGKT+TM GVT+Y+VA IY YI  H++R FVLK S
Sbjct: 107 VVSGINSSIFAYGQTSSGKTYTMTGVTEYTVADIYDYINKHEERAFVLKFS 157

[Close]
BLAST of Cucsa.054670 vs. Swiss-Prot
Match: KN7F_ORYSJ (Kinesin-like protein KIN-7F OS=Oryza sativa subsp. japonica GN=KIN7F PE=1 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 3.2e-13
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ INS+IFAYGQTSSGKT+TM G+T+Y+VA IY YI  H++R FVLK S
Sbjct: 108 VVSGINSSIFAYGQTSSGKTYTMTGITEYTVADIYDYIGKHEERAFVLKFS 158

[Close]
BLAST of Cucsa.054670 vs. Swiss-Prot
Match: KN7J_ORYSJ (Kinesin-like protein KIN-7J OS=Oryza sativa subsp. japonica GN=KIN7J PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.2e-13
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1 

Query: 5   INSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           IN++IFAYGQTSSGKT+TM G+T+YS++ IY YIE H +REF+LK S
Sbjct: 87  INASIFAYGQTSSGKTYTMVGITEYSMSDIYDYIEKHPEREFILKFS 133

[Close]
BLAST of Cucsa.054670 vs. Swiss-Prot
Match: KN7G_ARATH (Kinesin-like protein KIN-7G OS=Arabidopsis thaliana GN=KIN7G PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-12
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ +++++FAYGQTSSGKT+TM G+T Y++A IY YIE H +REF+LK S
Sbjct: 93  VVSGVHASVFAYGQTSSGKTYTMIGITDYALADIYDYIEKHNEREFILKFS 143

[Close]
BLAST of Cucsa.054670 vs. TrEMBL
Match: A0A0A0LNQ8_CUCSA (Kinesin-like protein OS=Cucumis sativus GN=Csa_2G365120 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-16
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V  INSTIFAYGQTSSGKTFTMNGVTQ+SVA IYSYIESHQDREFVLK S
Sbjct: 94  VVNGINSTIFAYGQTSSGKTFTMNGVTQHSVADIYSYIESHQDREFVLKFS 144

[Close]
BLAST of Cucsa.054670 vs. TrEMBL
Match: A0A059AHG6_EUCGR (Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_J02403 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-12
Identity = 35/51 (68.63%), Postives = 47/51 (92.16%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ INS++FAYGQTSSGKT+TM+G+T+YS+A IYSYIE H++REF+LK S
Sbjct: 71  VVSGINSSVFAYGQTSSGKTYTMSGITEYSMADIYSYIEKHKEREFLLKFS 121

[Close]
BLAST of Cucsa.054670 vs. TrEMBL
Match: A0A068TNQ0_COFCA (Kinesin-like protein OS=Coffea canephora GN=GSCOC_T00014194001 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-12
Identity = 35/51 (68.63%), Postives = 45/51 (88.24%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ INSTIFAYGQTSSGKT+TMNG+T+Y+VA IY YI+ H++R FVLK +
Sbjct: 99  VVSGINSTIFAYGQTSSGKTYTMNGITEYTVADIYDYIQKHEERAFVLKFA 149

[Close]
BLAST of Cucsa.054670 vs. TrEMBL
Match: A0A059AI84_EUCGR (Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_J02401 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.5e-12
Identity = 34/51 (66.67%), Postives = 47/51 (92.16%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ IN+++FAYGQTSSGKT+TM+G+T+YS+A IYSYIE H++REF+LK S
Sbjct: 95  VVSGINASVFAYGQTSSGKTYTMSGITEYSMADIYSYIEKHKEREFLLKFS 145

[Close]
BLAST of Cucsa.054670 vs. TrEMBL
Match: A0A059AH82_EUCGR (Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_J02401 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.5e-12
Identity = 34/51 (66.67%), Postives = 47/51 (92.16%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ IN+++FAYGQTSSGKT+TM+G+T+YS+A IYSYIE H++REF+LK S
Sbjct: 95  VVSGINASVFAYGQTSSGKTYTMSGITEYSMADIYSYIEKHKEREFLLKFS 145

[Close]
BLAST of Cucsa.054670 vs. TAIR10
Match: AT3G51150.2 (AT3G51150.2 ATP binding microtubule motor family protein)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-13
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ +++++FAYGQTSSGKT+TM G+T Y++A IY YIE H +REF+LK S
Sbjct: 93  VVSGVHASVFAYGQTSSGKTYTMIGITDYALADIYDYIEKHNEREFILKFS 143

[Close]
BLAST of Cucsa.054670 vs. TAIR10
Match: AT2G21300.1 (AT2G21300.1 ATP binding microtubule motor family protein)

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-13
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V  INS+IFAYGQTSSGKT+TM+G+T+++VA I+ YI  H+DR FV+K S
Sbjct: 98  VVKGINSSIFAYGQTSSGKTYTMSGITEFAVADIFDYIFKHEDRAFVVKFS 148

[Close]
BLAST of Cucsa.054670 vs. TAIR10
Match: AT5G66310.1 (AT5G66310.1 ATP binding microtubule motor family protein)

HSP 1 Score: 69.3 bits (168), Expect = 7.7e-13
Identity = 28/51 (54.90%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ +N+++FAYGQTSSGKT+TM+G+T  ++  IY YI+ H++REF+LK S
Sbjct: 94  VVSGVNASVFAYGQTSSGKTYTMSGITDCALVDIYGYIDKHKEREFILKFS 144

[Close]
BLAST of Cucsa.054670 vs. TAIR10
Match: AT5G42490.1 (AT5G42490.1 ATP binding microtubule motor family protein)

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-12
Identity = 29/47 (61.70%), Postives = 39/47 (82.98%), Query Frame = 1 

Query: 5   INSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           INS+IFAYGQTSSGKT+TM G+T++++  I+ YI+ H DR+F LK S
Sbjct: 87  INSSIFAYGQTSSGKTYTMCGITKFAMDDIFCYIQKHTDRKFTLKFS 133

[Close]
BLAST of Cucsa.054670 vs. TAIR10
Match: AT4G38950.1 (AT4G38950.1 ATP binding microtubule motor family protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-11
Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V  IN +IFAYGQTSSGKT+TM G+T+++VA I+ YI  H++R F +K S
Sbjct: 87  VVKGINCSIFAYGQTSSGKTYTMTGITEFAVADIFDYIFQHEERAFSVKFS 137

[Close]
BLAST of Cucsa.054670 vs. NCBI nr
Match: gi|659088053|ref|XP_008444776.1| (PREDICTED: kinesin-like protein NACK1 [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 1.8e-16
Identity = 46/51 (90.20%), Postives = 47/51 (92.16%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V  INSTIFAYGQTSSGKTFTMNGVTQYSVA IYSYIESHQDREFVLK S
Sbjct: 94  VVNGINSTIFAYGQTSSGKTFTMNGVTQYSVADIYSYIESHQDREFVLKFS 144

[Close]
BLAST of Cucsa.054670 vs. NCBI nr
Match: gi|449470116|ref|XP_004152764.1| (PREDICTED: kinesin-like protein NACK2 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 7.0e-16
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V  INSTIFAYGQTSSGKTFTMNGVTQ+SVA IYSYIESHQDREFVLK S
Sbjct: 94  VVNGINSTIFAYGQTSSGKTFTMNGVTQHSVADIYSYIESHQDREFVLKFS 144

[Close]
BLAST of Cucsa.054670 vs. NCBI nr
Match: gi|672192291|ref|XP_008775730.1| (PREDICTED: kinesin-like protein NACK1 isoform X1 [Phoenix dactylifera])

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-13
Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ INS+IFAYGQTSSGKT+TM G+TQYS+A IY YIE H++REFVLK S
Sbjct: 128 VVSGINSSIFAYGQTSSGKTYTMTGITQYSIADIYDYIEKHEEREFVLKFS 178

[Close]
BLAST of Cucsa.054670 vs. NCBI nr
Match: gi|672192295|ref|XP_008775732.1| (PREDICTED: kinesin-like protein NACK1 isoform X2 [Phoenix dactylifera])

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-13
Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           +V+ INS+IFAYGQTSSGKT+TM G+TQYS+A IY YIE H++REFVLK S
Sbjct: 128 VVSGINSSIFAYGQTSSGKTYTMTGITQYSIADIYDYIEKHEEREFVLKFS 178

[Close]
BLAST of Cucsa.054670 vs. NCBI nr
Match: gi|694317109|ref|XP_009336756.1| (PREDICTED: kinesin-like protein NACK1 [Pyrus x bretschneideri])

HSP 1 Score: 80.5 bits (197), Expect = 9.4e-13
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 1 

Query: 1   MVTVINSTIFAYGQTSSGKTFTMNGVTQYSVAGIYSYIESHQDREFVLKLS 52
           ++  INSTIFAYGQTSSGKT+TM G+T Y+VA IY YIE H DREFVLK S
Sbjct: 79  VINGINSTIFAYGQTSSGKTYTMKGITDYAVADIYDYIEKHSDREFVLKFS 129

The following BLAST results are available for this feature:
BLAST of Cucsa.054670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KN7H_ORYSJ1.1e-1366.67Kinesin-like protein KIN-7H OS=Oryza sativa subsp. japonica GN=KIN7H PE=2 SV=2[more]
KN7C_ORYSJ1.5e-1368.63Kinesin-like protein KIN-7C OS=Oryza sativa subsp. japonica GN=KIN7C PE=2 SV=1[more]
KN7F_ORYSJ3.2e-1366.67Kinesin-like protein KIN-7F OS=Oryza sativa subsp. japonica GN=KIN7F PE=1 SV=2[more]
KN7J_ORYSJ7.2e-1368.09Kinesin-like protein KIN-7J OS=Oryza sativa subsp. japonica GN=KIN7J PE=2 SV=1[more]
KN7G_ARATH2.7e-1258.82Kinesin-like protein KIN-7G OS=Arabidopsis thaliana GN=KIN7G PE=2 SV=1[more]
BLAST of Cucsa.054670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNQ8_CUCSA4.9e-1688.24Kinesin-like protein OS=Cucumis sativus GN=Csa_2G365120 PE=3 SV=1[more]
A0A059AHG6_EUCGR1.1e-1268.63Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_J02403 PE=3 SV=1[more]
A0A068TNQ0_COFCA1.9e-1268.63Kinesin-like protein OS=Coffea canephora GN=GSCOC_T00014194001 PE=3 SV=1[more]
A0A059AI84_EUCGR2.5e-1266.67Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_J02401 PE=3 SV=1[more]
A0A059AH82_EUCGR2.5e-1266.67Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_J02401 PE=3 SV=1[more]
BLAST of Cucsa.054670 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51150.21.5e-1358.82 ATP binding microtubule motor family protein[more]
AT2G21300.12.0e-1362.75 ATP binding microtubule motor family protein[more]
AT5G66310.17.7e-1354.90 ATP binding microtubule motor family protein[more]
AT5G42490.16.5e-1261.70 ATP binding microtubule motor family protein[more]
AT4G38950.11.4e-1156.86 ATP binding microtubule motor family protein[more]
BLAST of Cucsa.054670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088053|ref|XP_008444776.1|1.8e-1690.20PREDICTED: kinesin-like protein NACK1 [Cucumis melo][more]
gi|449470116|ref|XP_004152764.1|7.0e-1688.24PREDICTED: kinesin-like protein NACK2 [Cucumis sativus][more]
gi|672192291|ref|XP_008775730.1|4.2e-1372.55PREDICTED: kinesin-like protein NACK1 isoform X1 [Phoenix dactylifera][more]
gi|672192295|ref|XP_008775732.1|4.2e-1372.55PREDICTED: kinesin-like protein NACK1 isoform X2 [Phoenix dactylifera][more]
gi|694317109|ref|XP_009336756.1|9.4e-1372.55PREDICTED: kinesin-like protein NACK1 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase
IPR027640Kinesin-like_fam
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0005524ATP binding
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0007018 microtubule-based movement
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0045298 tubulin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.054670.1Cucsa.054670.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001752Kinesin motor domainGENE3DG3DSA:3.40.850.10coord: 4..50
score: 2.0
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 5..46
score: 2.3
IPR001752Kinesin motor domainPROFILEPS50067KINESIN_MOTOR_2coord: 1..51
score: 17
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..51
score: 5.94
IPR027640Kinesin-like proteinPANTHERPTHR24115FAMILY NOT NAMEDcoord: 5..51
score: 5.5
NoneNo IPR availablePANTHERPTHR24115:SF496ATP BINDING MICROTUBULE MOTOR FAMILY PROTEINcoord: 5..51
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.054670Cucumber (Chinese Long) v3cgycucB042
Cucsa.054670Wild cucumber (PI 183967)cgycpiB040
Cucsa.054670Cucumber (Chinese Long) v2cgycuB039