Cucsa.050120 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.050120
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionHistone H3
Locationscaffold00551 : 223962 .. 224816 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAAACCCTATATCTCCATCACCAAACCATCGAAGTTTCCTCATCGCTCAATCGAATCTTCAACCTCCAGAACTCAAATCTTCCAATTTCTGCTCTACTGATTTGCCCGAATGGCTCGCACCAAGCAAACCGCCAGGAAGTCTACCGGAGGCAAGGCCCCCAGAAAGCAATTGGCCACCAAAGCTGCCAGGAAGTCAGCTCCGGCTACCGGTGGAGTGAAGAAGCCCCATCGTTTCCGTCCTGGTACCGTCGCACTTCGTGAAATCAGGAAGTACCAGAAGAGCACCGAGCTTCTGATCCGAAAGCTTCCGTTTCAACGTTTGGTTCGCGAAATTGCTCAGGATTTCAAGACCGATCTGAGGTTCCAGAGCAGTGCTGTCGCGGCGCTTCAGGAGGCGGCCGAAGCCTATTTGGTTGGTCTGTTTGAGGATACGAATCTTTGTGCTATTCATGCTAAGAGGGTAACCATTATGCCTAAGGATATTCAATTGGCAAGGAGGATTAGAGGGGAAAGGGCTTAGAGGGTTTGGTTTGATTATTGTGTTTTTGGTTCTTTACTTTTTAAGTGCTTTTTCTGTCTCTAGATTTAGTCTATGGTGTAAATCTACTGTGTTTTGTGTTTTGATATGCTGTCCCATGAGTATATGGTAGGTTACATGTATATGGGACTCAACAATCTGTTTACTAAATGAATTATCTCTTTTCATTTATTATCTCTATCTAAATTTGTTGACTTCAAATGGTATGAGTTAATATTATTTTGTTGTTCTAGTGAACTCATAAGTTCAATTCTCTTTTACCCTTTTGTGAGTTCCTAATTTTGATAATGCGAATAAAATTTTAGTTAACAACAA

mRNA sequence

TGCAAACCCTATATCTCCATCACCAAACCATCGAAGTTTCCTCATCGCTCAATCGAATCTTCAACCTCCAGAACTCAAATCTTCCAATTTCTGCTCTACTGATTTGCCCGAATGGCTCGCACCAAGCAAACCGCCAGGAAGTCTACCGGAGGCAAGGCCCCCAGAAAGCAATTGGCCACCAAAGCTGCCAGGAAGTCAGCTCCGGCTACCGGTGGAGTGAAGAAGCCCCATCGTTTCCGTCCTGGTACCGTCGCACTTCGTGAAATCAGGAAGTACCAGAAGAGCACCGAGCTTCTGATCCGAAAGCTTCCGTTTCAACGTTTGGTTCGCGAAATTGCTCAGGATTTCAAGACCGATCTGAGGTTCCAGAGCAGTGCTGTCGCGGCGCTTCAGGAGGCGGCCGAAGCCTATTTGGTTGGTCTGTTTGAGGATACGAATCTTTGTGCTATTCATGCTAAGAGGGTAACCATTATGCCTAAGGATATTCAATTGGCAAGGAGGATTAGAGGGGAAAGGGCTTAGAGGGTTTGGTTTGATTATTGTGTTTTTGGTTCTTTACTTTTTAAGTGCTTTTTCTGTCTCTAGATTTAGTCTATGGTGTAAATCTACTGTGTTTTGTGTTTTGATATGCTGTCCCATGAGTATATGGTAGGTTACATGTATATGGGACTCAACAATCTGTTTACTAAATGAATTATCTCTTTTCATTTATTATCTCTATCTAAATTTGTTGACTTCAAATGGTATGAGTTAATATTATTTTGTTGTTCTAGTGAACTCATAAGTTCAATTCTCTTTTACCCTTTTGTGAGTTCCTAATTTTGATAATGCGAATAAAATTTTAGTTAACAACAA

Coding sequence (CDS)

ATGGCTCGCACCAAGCAAACCGCCAGGAAGTCTACCGGAGGCAAGGCCCCCAGAAAGCAATTGGCCACCAAAGCTGCCAGGAAGTCAGCTCCGGCTACCGGTGGAGTGAAGAAGCCCCATCGTTTCCGTCCTGGTACCGTCGCACTTCGTGAAATCAGGAAGTACCAGAAGAGCACCGAGCTTCTGATCCGAAAGCTTCCGTTTCAACGTTTGGTTCGCGAAATTGCTCAGGATTTCAAGACCGATCTGAGGTTCCAGAGCAGTGCTGTCGCGGCGCTTCAGGAGGCGGCCGAAGCCTATTTGGTTGGTCTGTTTGAGGATACGAATCTTTGTGCTATTCATGCTAAGAGGGTAACCATTATGCCTAAGGATATTCAATTGGCAAGGAGGATTAGAGGGGAAAGGGCTTAG

Protein sequence

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Homology
[Close]
BLAST of Cucsa.050120 vs. Swiss-Prot
Match: H32_ARATH (Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. Swiss-Prot
Match: H32_ASPOF (Histone H3.2 OS=Asparagus officinalis PE=2 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. Swiss-Prot
Match: H32_BRANA (Histone H3.2 OS=Brassica napus PE=2 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. Swiss-Prot
Match: H32_EUPES (Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. Swiss-Prot
Match: H32_PETCR (Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TrEMBL
Match: A0A096TUS0_MAIZE (Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 34  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 93

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 94  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 153

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 154 MPKDIQLARRIRGERA 169

[Close]
BLAST of Cucsa.050120 vs. TrEMBL
Match: A0A068USU6_COFCA (Histone H3 OS=Coffea canephora GN=GSCOC_T00025071001 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TrEMBL
Match: A0A0D9ZKN6_9ORYZ (Histone H3 OS=Oryza glumipatula PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TrEMBL
Match: E6NU67_JATCU (Histone H3 OS=Jatropha curcas GN=JHL18I08.11 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TrEMBL
Match: A0A067FC07_CITSI (Histone H3 OS=Citrus sinensis GN=CISIN_1g032661mg PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TAIR10
Match: AT1G09200.1 (AT1G09200.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TAIR10
Match: AT3G27360.1 (AT3G27360.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TAIR10
Match: AT5G10390.1 (AT5G10390.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TAIR10
Match: AT5G10400.1 (AT5G10400.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. TAIR10
Match: AT5G65360.1 (AT5G65360.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.050120 vs. NCBI nr
Match: gi|992271660|gb|KXG31833.1| (hypothetical protein SORBI_003G065000, partial [Sorghum bicolor])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 87  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 146

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 147 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 206

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 207 MPKDIQLARRIRGERA 222

[Close]
BLAST of Cucsa.050120 vs. NCBI nr
Match: gi|643697049|gb|KDP20192.1| (hypothetical protein JCGZ_07912 [Jatropha curcas])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 91  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 150

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 151 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 210

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 211 MPKDIQLARRIRGERA 226

[Close]
BLAST of Cucsa.050120 vs. NCBI nr
Match: gi|670445861|ref|XP_008663191.1| (PREDICTED: histone H3.2-like [Zea mays])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 36  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 95

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 96  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 155

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 156 MPKDIQLARRIRGERA 171

[Close]
BLAST of Cucsa.050120 vs. NCBI nr
Match: gi|944232983|gb|KQK97345.1| (hypothetical protein SETIT_012204mg, partial [Setaria italica])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 182

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 183 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 242

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 243 MPKDIQLARRIRGERA 258

[Close]
BLAST of Cucsa.050120 vs. NCBI nr
Match: gi|923722678|ref|XP_013665518.1| (PREDICTED: histone H3-like centromeric protein CSE4 [Brassica napus])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:
BLAST of Cucsa.050120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H32_ARATH1.0e-69100.00Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2[more]
H32_ASPOF1.0e-69100.00Histone H3.2 OS=Asparagus officinalis PE=2 SV=3[more]
H32_BRANA1.0e-69100.00Histone H3.2 OS=Brassica napus PE=2 SV=3[more]
H32_EUPES1.0e-69100.00Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3[more]
H32_PETCR1.0e-69100.00Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2[more]
BLAST of Cucsa.050120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A096TUS0_MAIZE1.1e-67100.00Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1[more]
A0A068USU6_COFCA1.1e-67100.00Histone H3 OS=Coffea canephora GN=GSCOC_T00025071001 PE=3 SV=1[more]
A0A0D9ZKN6_9ORYZ1.1e-67100.00Histone H3 OS=Oryza glumipatula PE=3 SV=1[more]
E6NU67_JATCU1.1e-67100.00Histone H3 OS=Jatropha curcas GN=JHL18I08.11 PE=3 SV=1[more]
A0A067FC07_CITSI1.1e-67100.00Histone H3 OS=Citrus sinensis GN=CISIN_1g032661mg PE=3 SV=1[more]
BLAST of Cucsa.050120 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09200.15.7e-71100.00 Histone superfamily protein[more]
AT3G27360.15.7e-71100.00 Histone superfamily protein[more]
AT5G10390.15.7e-71100.00 Histone superfamily protein[more]
AT5G10400.15.7e-71100.00 Histone superfamily protein[more]
AT5G65360.15.7e-71100.00 Histone superfamily protein[more]
BLAST of Cucsa.050120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|992271660|gb|KXG31833.1|1.6e-67100.00hypothetical protein SORBI_003G065000, partial [Sorghum bicolor][more]
gi|643697049|gb|KDP20192.1|1.6e-67100.00hypothetical protein JCGZ_07912 [Jatropha curcas][more]
gi|670445861|ref|XP_008663191.1|1.6e-67100.00PREDICTED: histone H3.2-like [Zea mays][more]
gi|944232983|gb|KQK97345.1|1.6e-67100.00hypothetical protein SETIT_012204mg, partial [Setaria italica][more]
gi|923722678|ref|XP_013665518.1|1.6e-67100.00PREDICTED: histone H3-like centromeric protein CSE4 [Brassica napus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008283 cell proliferation
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009536 plastid
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.050120.1Cucsa.050120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 114..135
score: 1.3E-85coord: 98..114
score: 1.3E-85coord: 34..55
score: 1.3E-85coord: 80..98
score: 1.3E-85coord: 3..17
score: 1.3E-85coord: 17..31
score: 1.3E-85coord: 58..75
score: 1.3
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..136
score: 1.2E
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 34..136
score: 8.4
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
scor
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 67..75
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..132
score: 8.0
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 2..134
score: 5.5
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 2..133
score: 1.14

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.050120Cucurbita pepo (Zucchini)cgycpeB0046
Cucsa.050120Cucurbita pepo (Zucchini)cgycpeB0047
Cucsa.050120Cucurbita pepo (Zucchini)cgycpeB0048
Cucsa.050120Cucurbita pepo (Zucchini)cgycpeB0049
Cucsa.050120Bottle gourd (USVL1VR-Ls)cgylsiB030
Cucsa.050120Bottle gourd (USVL1VR-Ls)cgylsiB031
Cucsa.050120Bottle gourd (USVL1VR-Ls)cgylsiB032
Cucsa.050120Melon (DHL92) v3.6.1cgymedB027
Cucsa.050120Melon (DHL92) v3.6.1cgymedB028
Cucsa.050120Silver-seed gourdcarcgyB0413
Cucsa.050120Silver-seed gourdcarcgyB0519
Cucsa.050120Silver-seed gourdcarcgyB0537
Cucsa.050120Silver-seed gourdcarcgyB0593
Cucsa.050120Cucumber (Chinese Long) v3cgycucB031
Cucsa.050120Cucumber (Chinese Long) v3cgycucB032
Cucsa.050120Cucumber (Chinese Long) v3cgycucB033
Cucsa.050120Watermelon (97103) v2cgywmbB029
Cucsa.050120Watermelon (97103) v2cgywmbB031
Cucsa.050120Wax gourdcgywgoB034
Cucsa.050120Cucumber (Gy14) v1cgycgyB010
Cucsa.050120Cucumber (Gy14) v1cgycgyB011
Cucsa.050120Cucurbita maxima (Rimu)cgycmaB0050
Cucsa.050120Cucurbita maxima (Rimu)cgycmaB0051
Cucsa.050120Cucurbita maxima (Rimu)cgycmaB0052
Cucsa.050120Cucurbita moschata (Rifu)cgycmoB0045
Cucsa.050120Cucurbita moschata (Rifu)cgycmoB0046
Cucsa.050120Cucurbita moschata (Rifu)cgycmoB0047
Cucsa.050120Wild cucumber (PI 183967)cgycpiB031
Cucsa.050120Wild cucumber (PI 183967)cgycpiB032
Cucsa.050120Cucumber (Chinese Long) v2cgycuB030
Cucsa.050120Cucumber (Chinese Long) v2cgycuB031
Cucsa.050120Melon (DHL92) v3.5.1cgymeB029
Cucsa.050120Watermelon (97103) v1cgywmB032
Cucsa.050120Watermelon (97103) v1cgywmB033