Cucsa.047320 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCCTTGAGTCGATGGAAGGTGGTGATTTTTAGCCAATTGAATCCAGGCGAGAATTTATTAGTTCATTGTAAATCAAAAGACAACGATTTGGGCGAACATTCGTTGCAAGTGAGTCAGAATTTTTCATGGAAATTCAAAGAAAACTTGTTTTCTACAACACTGTTTTGGTGTACTCTAACAACTTCATCGAAGAAAAAaGTAACAATGGATGTGTTTTGGCCAGAGAGACACAATTGGCTTGCTATTCGATGCAGTTACAGAACTTGTATTTGGGTTGCTCAAGATGATGGTATTTATTTAGTCAACAAGAATGCAAGGGAATTT ATGGCGCCCTTGAGTCGATGGAAGGTGGTGATTTTTAGCCAATTGAATCCAGGCGAGAATTTATTAGTTCATTGTAAATCAAAAGACAACGATTTGGGCGAACATTCGTTGCAAGTGAGTCAGAATTTTTCATGGAAATTCAAAGAAAACTTGTTTTCTACAACACTGTTTTGGTGTACTCTAACAACTTCATCGAAGAAAAAAGTAACAATGGATGTGTTTTGGCCAGAGAGACACAATTGGCTTGCTATTCGATGCAGTTACAGAACTTGTATTTGGGTTGCTCAAGATGATGGTATTTATTTAGTCAACAAGAATGCAAGGGAATTT ATGGCGCCCTTGAGTCGATGGAAGGTGGTGATTTTTAGCCAATTGAATCCAGGCGAGAATTTATTAGTTCATTGTAAATCAAAAGACAACGATTTGGGCGAACATTCGTTGCAAGTGAGTCAGAATTTTTCATGGAAATTCAAAGAAAACTTGTTTTCTACAACACTGTTTTGGTGTACTCTAACAACTTCATCGAAGAAAAAaGTAACAATGGATGTGTTTTGGCCAGAGAGACACAATTGGCTTGCTATTCGATGCAGTTACAGAACTTGTATTTGGGTTGCTCAAGATGATGGTATTTATTTAGTCAACAAGAATGCAAGGGAATTT MAPLSRWKVVIFSQLNPGENLLVHCKSKDNDLGEHSLQVSQNFSWKFKENLFSTTLFWCTLTTSSKKKVTMDVFWPERHNWLAIRCSYRTCIWVAQDDGIYLVNKNAREF
BLAST of Cucsa.047320 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.6e-24 Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 1
BLAST of Cucsa.047320 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-22 Identity = 51/102 (50.00%), Postives = 65/102 (63.73%), Query Frame = 1
BLAST of Cucsa.047320 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-21 Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 1
BLAST of Cucsa.047320 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.8e-20 Identity = 48/102 (47.06%), Postives = 60/102 (58.82%), Query Frame = 1
BLAST of Cucsa.047320 vs. TrEMBL
Match: V4P948_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026872mg PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-19 Identity = 45/101 (44.55%), Postives = 64/101 (63.37%), Query Frame = 1
BLAST of Cucsa.047320 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 95.5 bits (236), Expect = 2.2e-20 Identity = 42/101 (41.58%), Postives = 64/101 (63.37%), Query Frame = 1
BLAST of Cucsa.047320 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1) HSP 1 Score: 95.1 bits (235), Expect = 2.8e-20 Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 1
BLAST of Cucsa.047320 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 70.1 bits (170), Expect = 9.7e-13 Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 1
BLAST of Cucsa.047320 vs. TAIR10
Match: AT1G26798.1 (AT1G26798.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 67.0 bits (162), Expect = 8.2e-12 Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 1
BLAST of Cucsa.047320 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-10 Identity = 36/110 (32.73%), Postives = 57/110 (51.82%), Query Frame = 1
BLAST of Cucsa.047320 vs. NCBI nr
Match: gi|659080970|ref|XP_008441078.1| (PREDICTED: uncharacterized protein LOC103485305 [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 2.8e-46 Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 1
BLAST of Cucsa.047320 vs. NCBI nr
Match: gi|659109767|ref|XP_008454866.1| (PREDICTED: uncharacterized protein LOC103495175 [Cucumis melo]) HSP 1 Score: 129.4 bits (324), Expect = 3.8e-27 Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 1
BLAST of Cucsa.047320 vs. NCBI nr
Match: gi|659133299|ref|XP_008466658.1| (PREDICTED: uncharacterized protein LOC103504013 [Cucumis melo]) HSP 1 Score: 122.1 bits (305), Expect = 6.1e-25 Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 1
BLAST of Cucsa.047320 vs. NCBI nr
Match: gi|449437310|ref|XP_004136435.1| (PREDICTED: uncharacterized protein LOC101208617 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 8.0e-25 Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 1
BLAST of Cucsa.047320 vs. NCBI nr
Match: gi|595792631|ref|XP_007200064.1| (hypothetical protein PRUPE_ppa022213mg, partial [Prunus persica]) HSP 1 Score: 119.0 bits (297), Expect = 5.2e-24 Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |