Cucsa.044020 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTTTCTTTAGTTTTTGTCTATTCTTCAAATTTCTCTTCTGCTTATTCGTCGTCTCCGATTCTCTTCCATTTTCCGGTTCCTTACCAATCGGGAACAGGAAATGGCATCCCTAGCCACTCTATTCTCTCTTCAATTCTCGTTCCAGAGACCTTCTACTCGCCGGTTTCTTTCTCGATTTCATCACAGATACGATTCTTTCAAGCACCGTAAAGATTGGGTTCGGAGACGCACTCTGCTCCCTGTTCTTTCCTCGTCCGATGGAACTAATCAGGATACTCAGCCGGAACCTGAATCAATATCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCGTCATCGTCTCCTTCAATTTCGAGTAATTCAACGTATACTTTGTGTGCTGCGTTGGGCGGGATTGGATTCGTTGAAACTGCGTATTTGAGTTACCTCAAGCTCACTGATTCAGCTGCCTTCTGCCCGATTGGTGGCGGAGGCTGTGATAACGTTCTCAACAGTGATTATGCTGCTGTGTTTGGTATCTTTCTATTCATGATTTTACAATAATACTCGGAGAATTTACAATATTAAATCTGTTTCCGTTTTTGCTTCGAAATTTTTAGTCTATTGTATGTTAATACTTTATTACATTGAGTCAATGATCACGTGTTTGTAATTACAAGGTGTACCACTGCCTTTGATTGGAATGGTGGCGTATGGATTAGTTGGAGCAGTTAGTTTGCAATTGGCGGCTAAGAAATTGCCTTTTGGTATTGATGAATCTGGTGGTCGTTTAGTGTTGCTTGGCACTACTACCTCTATGGCAGCAGCCAGTGCATACTTTCTGTACATTCTGAACACACAATTTTCTGGAGTTACATGCTCATATTGCCTAGTATCTGCTCTGTTGTCGTTCAGCTTATTCTTTGCCACTCTGAAGGTTTTGTATTTTGGTTATCTTTTTTtAATTGAAGATTGTTGTTGATTCATACATTTGTGAAGGTTTCTTGTGGTTATGACCTAGGATTTTGGATTGGATGAGTCCAGAAGACGATTGGCCACTCAGATAATTATGGCTGGCATCGTTTTTTtCACCCTTTCTACCTCATATGGTTCCTTACCCATTTCTCGAAGGTTCGTGTTACAGAACTTCGTGAGATAGCTTAATGGATATTCTCTTTCGTTTGTGTGCTTGACTTCTGATTACTTTTGATATCTGTACTTTTCTTTTGCTGCGATATGTATGCTTCTAAAATAGTTTAAACAGTTTTCACCATTTTTTTAAATGTTTAATGCAAGCAAATTAGTACATAGAAGGGCATGACACTCCTCATTAATTTAAAAGGGTAATTGGGGTGGGTAGCATTTTAAAGAATAATAACTAAGTATATAGTAACATTTTAAAAGAATGATAGTATAGCAAAATCTAGTGATAAACTTCTATTAGTGATATGGTCTAGCACTAATAGACTCTAAACGTCAAGTCCAAATTTTACTATATTTGAAAATTCTTTTGCATTGTGTTACATTTGCAAATAATTTAAGTTTTGATTCCTATTTTTGTAATTGTCTCAACCTTAAATCACCAATTTTGCAAATTTGTTGCATGAGGATGAAATCTTGGGTTGTTATCTGTCTGGCAAAGCTTTGACATTAATTGTTACTGCTAGTTCGATTGATTCTGTGGAACTAAAGCTATCATGAATTTATTTTGTTTTGCGGTCTTCTGTAAGAAATAATCTAACTGGTGTTTCCGTAAACTGAGGATTTGTCTTCTGTGTATCCTTTGGTTTGATTCCCTGTCATCATCGACCTTAGAATGCTAATTCTGTTGACCTCAATTACTTAGGAGTTAGGAGCTATCTTCATCTTTGGTGTTATGAATGATTTCGATATTGTTTTGGAACTTAAGATTAATTTTGTTGGCATTTTTTGTTATCTTTAGTAATTAATCTCAAATGATCTATTTCCATTTTCTTTTTATTGTTTTGTGATTCATCTTCAGCTTCATTTTGGTTTCATTTCTTATCAATTTACGTGGAATTTATTTATCTATTTTTtCTTTTGACTTTACAGTGCTGCTGAACTTGACTTGCCGTACTTTGAAACTGAGCTAACAAAGCCATCAACCCCTCTGGCCATTTCCCTTGCAAAGCATTTGCAGTCCATCGGGGCCAAAATGTATGGAGCTTTTTGGTGTTCACATTGTGTAGAGCAGAAAGAGGTAATATCTCCTTCTGTAAAATGGTAATGACATGATTGAGTAATGCAAGAACATAATAATGTGATGGGGGCACTTATTTGAGTCTTCCCAGCCAAACCATTAAAATATAGAGTATTCCAAAGGGTAGTAGTTTTAGGAATAATAATTAACTATATAACAACGTTTTAGAAAAATTACAAATATAGCAAGATGTATCAATGATAGACTTTATTGCAGTAGAGTCTATTACCTATCCAATCTAAGAGCTGGGTTTAAAATTTGTTATATTTACAAATTCTTTTTATTGTGCTATATATGCTAATTCTTTTAGTCTGGTTTTCATATTTGCAACTGTCCCTAGAATACGTATGGCTTTTAACTTAACTTTACATGTGATCATCACTATTGCTTCGTTTTTACCTTTGGGCTCATGGATGTTATTGCAAGTAAGACAATGATCTTTTCCTCTTAGCGTTGTTTTGTGATGCAACCAAACATATTTATCAATTATGCTATCTCGCTGTCAATACAGATGTTTGGACGTGAGGCAGCAAAACTATTAGACTATGTAGAGTGTTTCCCTAATGGATATCATAAAGGCACTAAGATAGAGAAAGTTTGTTCCGATGTTGGAATAGAAGGCTTCCCAACATGGGTAATTAACGGTCAGGTAAAGAAGCATAACTTAAGTGGCATTTATTTACGTTTCTGAGCAATCTTTTTTATTACCAGCTTTTCTTTGCATGCCTACAAATTAAaTAAaAAAAaTTTAAGAATGCTATGGTCGTGTCACTATTTGTCTTGTTGTATTTGCTCACTAGTAAATAGATTGCCCAAAATTGTCAGTGGCAATTGGGGTGGATGGTTCTGAAACACGATGCAAGGGCCCGTTATGATCTAGGAGTATATAAATTTGGCTAAAGTGTGGATTGTATACAAATATAATGATTGAGACAATAGCTTCTCAATAGCTCAAGTAGGGAAAGTGCTTAGTTACTAACATATTCATTTGAAAAGAATATCCCTAAGATCTGCATCTTCATGCTTATTGCATGGTGGTTCGTAGAGAGTTGCAGCATTTACCTCAACCTTTAATTAATGAAAACTTCCCCAAGCACGACCTAACTTGAAAAGAATCTATTCTAAGAAACCTTGCACAAGTAGTTACATGAAAATAAATGAAAGTTCTTGTGCTTACTTCCTCTCTTTGCTGGGCTGTTTATACTTCTTTCTGTATCATCATCAAATCTCTGGTTTCCTGCAGGTTTTGAGTGGGGAGAAAGAACTGTCAGAACTTGCTGAAATTTCAGGATTTTCGGCTGATGGGATAAGTTAAAACATCCTTTTATATTTTCTTCTGTTTATATCAATTCAGTAGGCATATATAGATAAGTATATAATAGATATCTAATCACTTCATTTATTACTCATCAAGGGAATAGGTAATCAGTTCAGAGTCTTACTTTTGCTCTTCTTGATGTAGATATAACAAATACAAATGCTTGATATTTATTTTGAATTAGTTGTCCTTTACGAGTAGAGTAGAGTTTAGATCAATTTTTGTTAGATTAGTTAATGTTTCAAAAACTTCACTTTCAATAATCTATTCATAAGTGGTTGTCTCGGAGCATTGGATGCTTTGATATGTAAGGTTATATTGGTTACTTTGGCATATTAATCGTTGCATCCATGTATAGATGGTTGTGTGATCTTTAGAAGAGATTTTAAAATGTTTAAAACATATTCATCAATATGCTTTTGGACATACTTTAACCAATTCAAAATTGTTCTCTAATGTGTAACTTTTTGCTGGTTTTCTCTAACATGTATAAAATGTGGTCTAAAAAAGTGGGTTGGCTTTTCAAAGCTAAGTATAGATTCATTGAT TTTCTTTCTTTAGTTTTTGTCTATTCTTCAAATTTCTCTTCTGCTTATTCGTCGTCTCCGATTCTCTTCCATTTTCCGGTTCCTTACCAATCGGGAACAGGAAATGGCATCCCTAGCCACTCTATTCTCTCTTCAATTCTCGTTCCAGAGACCTTCTACTCGCCGGTTTCTTTCTCGATTTCATCACAGATACGATTCTTTCAAGCACCGTAAAGATTGGGTTCGGAGACGCACTCTGCTCCCTGTTCTTTCCTCGTCCGATGGAACTAATCAGGATACTCAGCCGGAACCTGAATCAATATCCACACcttcttcttcttcttcttcttcttcttcctcgtcatcgtctccttcAATTTCGAGTAATTCAACGTATACTTTGTGTGCTGCGTTGGGCGGGATTGGATTCGTTGAAACTGCGTATTTGAGTTACCTCAAGCTCACTGATTCAGCTGCCTTCTGCCCGATTGGTGGCGGAGGCTGTGATAACGTTCTCAACAGTGATTATGCTGCTGTGTTTGGTGTACCACTGCCTTTGATTGGAATGGTGGCGTATGGATTAGTTGGAGCAGTTAGTTTGCAATTGGCGGCTAAGAAATTGCCTTTTGGTATTGATGAATCTGGTGGTCGTTTAGTGTTGCTTGGCACTACTACCTCTATGGCAGCAGCCAGTGCATACTTTCTGTACATTCTGAACACACAATTTTCTGGAGTTACATGCTCATATTGCCTAGTATCTGCTCTGTTGTCGTTCAGCTTATTCTTTGCCACTCTGAAGGATTTTGGATTGGATGAGTCCAGAAGACGATTGGCCACTCAGATAATTATGGCTGGCATCGTTTTTTTCACCCTTTCTACCTCATATGGTTCCTTACCCATTTCTCGAAGTGCTGCTGAACTTGACTTGCCGTACTTTGAAACTGAGCTAACAAAGCCATCAACCCCTCTGGCCATTTCCCTTGCAAAGCATTTGCAGTCCATCGGGGCCAAAATGTATGGAGCTTTTTGGTGTTCACATTGTGTAGAGCAGAAAGAGATGTTTGGACGTGAGGCAGCAAAACTATTAGACTATGTAGAGTGTTTCCCTAATGGATATCATAAAGGCACTAAGATAGAGAAAGTTTGTTCCGATGTTGGAATAGAAGGCTTCCCAACATGGGTAATTAACGGTCAGGTTTTGAGTGGGGAGAAAGAACTGTCAGAACTTGCTGAAATTTCAGGATTTTCGGCTGATGGGATAAGTTAAAACATCCTTTTATATTTTCTTCTGTTTATATCAATTCAGTAGGCATATATAGATAAGTATATAATAGATATCTAATCACTTCATTTATTACTCATCAAGGGAATAGGTAATCAGTTCAGAGTCTTACTTTTGCTCTTCTTGATGTAGATATAACAAATACAAATGCTTGATATTTATTTTGAATTAGTTGTCCTTTACGAGTAGAGTAGAGTTTAGATCAATTTTTGTTAGATTAGTTAATGTTTCAAAAACTTCACTTTCAATAATCTATTCATAAGTGGTTGTCTCGGAGCATTGGATGCTTTGATATGTAAGGTTATATTGGTTACTTTGGCATATTAATCGTTGCATCCATGTATAGATGGTTGTGTGATCTTTAGAAGAGATTTTAAAATGTTTAAAACATATTCATCAATATGCTTTTGGACATACTTTAACCAATTCAAAATTGTTCTCTAATGTGTAACTTTTTGCTGGTTTTCTCTAACATGTATAAAATGTGGTCTAAAAAAGTGGGTTGGCTTTTCAAAGCTAAGTATAGATTCATTGAT ATGGCATCCCTAGCCACTCTATTCTCTCTTCAATTCTCGTTCCAGAGACCTTCTACTCGCCGGTTTCTTTCTCGATTTCATCACAGATACGATTCTTTCAAGCACCGTAAAGATTGGGTTCGGAGACGCACTCTGCTCCCTGTTCTTTCCTCGTCCGATGGAACTAATCAGGATACTCAGCCGGAACCTGAATCAATATCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCGTCATCGTCTCCTTCAATTTCGAGTAATTCAACGTATACTTTGTGTGCTGCGTTGGGCGGGATTGGATTCGTTGAAACTGCGTATTTGAGTTACCTCAAGCTCACTGATTCAGCTGCCTTCTGCCCGATTGGTGGCGGAGGCTGTGATAACGTTCTCAACAGTGATTATGCTGCTGTGTTTGGTGTACCACTGCCTTTGATTGGAATGGTGGCGTATGGATTAGTTGGAGCAGTTAGTTTGCAATTGGCGGCTAAGAAATTGCCTTTTGGTATTGATGAATCTGGTGGTCGTTTAGTGTTGCTTGGCACTACTACCTCTATGGCAGCAGCCAGTGCATACTTTCTGTACATTCTGAACACACAATTTTCTGGAGTTACATGCTCATATTGCCTAGTATCTGCTCTGTTGTCGTTCAGCTTATTCTTTGCCACTCTGAAGGATTTTGGATTGGATGAGTCCAGAAGACGATTGGCCACTCAGATAATTATGGCTGGCATCGTTTTTTtCACCCTTTCTACCTCATATGGTTCCTTACCCATTTCTCGAAGTGCTGCTGAACTTGACTTGCCGTACTTTGAAACTGAGCTAACAAAGCCATCAACCCCTCTGGCCATTTCCCTTGCAAAGCATTTGCAGTCCATCGGGGCCAAAATGTATGGAGCTTTTTGGTGTTCACATTGTGTAGAGCAGAAAGAGATGTTTGGACGTGAGGCAGCAAAACTATTAGACTATGTAGAGTGTTTCCCTAATGGATATCATAAAGGCACTAAGATAGAGAAAGTTTGTTCCGATGTTGGAATAGAAGGCTTCCCAACATGGGTAATTAACGGTCAGGTTTTGAGTGGGGAGAAAGAACTGTCAGAACTTGCTGAAATTTCAGGATTTTCGGCTGATGGGATAAGTTAA MASLATLFSLQFSFQRPSTRRFLSRFHHRYDSFKHRKDWVRRRTLLPVLSSSDGTNQDTQPEPESISTPSSSSSSSSSSSSSPSISSNSTYTLCAALGGIGFVETAYLSYLKLTDSAAFCPIGGGGCDNVLNSDYAAVFGVPLPLIGMVAYGLVGAVSLQLAAKKLPFGIDESGGRLVLLGTTTSMAAASAYFLYILNTQFSGVTCSYCLVSALLSFSLFFATLKDFGLDESRRRLATQIIMAGIVFFTLSTSYGSLPISRSAAELDLPYFETELTKPSTPLAISLAKHLQSIGAKMYGAFWCSHCVEQKEMFGREAAKLLDYVECFPNGYHKGTKIEKVCSDVGIEGFPTWVINGQVLSGEKELSELAEISGFSADGIS*
BLAST of Cucsa.044020 vs. Swiss-Prot
Match: LTO1_ARATH (Thiol-disulfide oxidoreductase LTO1 OS=Arabidopsis thaliana GN=LTO1 PE=1 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-109 Identity = 205/338 (60.65%), Postives = 254/338 (75.15%), Query Frame = 1
BLAST of Cucsa.044020 vs. Swiss-Prot
Match: VKOR_SYNJB (Vitamin K epoxide reductase homolog OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=CYB_2278 PE=1 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-37 Identity = 102/283 (36.04%), Postives = 150/283 (53.00%), Query Frame = 1
BLAST of Cucsa.044020 vs. TrEMBL
Match: A0A0A0KMN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507390 PE=4 SV=1) HSP 1 Score: 746.1 bits (1925), Expect = 2.1e-212 Identity = 380/384 (98.96%), Postives = 380/384 (98.96%), Query Frame = 1
BLAST of Cucsa.044020 vs. TrEMBL
Match: A0A0B0NWZ0_GOSAR (DNA polymerase III polC-type OS=Gossypium arboreum GN=F383_08469 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 3.1e-123 Identity = 222/336 (66.07%), Postives = 271/336 (80.65%), Query Frame = 1
BLAST of Cucsa.044020 vs. TrEMBL
Match: A0A0D2NUF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G004900 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 3.1e-123 Identity = 222/336 (66.07%), Postives = 272/336 (80.95%), Query Frame = 1
BLAST of Cucsa.044020 vs. TrEMBL
Match: A5C1X1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010788 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 3.8e-121 Identity = 220/308 (71.43%), Postives = 256/308 (83.12%), Query Frame = 1
BLAST of Cucsa.044020 vs. TrEMBL
Match: U5GEY0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10860g PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 2.1e-119 Identity = 217/343 (63.27%), Postives = 271/343 (79.01%), Query Frame = 1
BLAST of Cucsa.044020 vs. TAIR10
Match: AT4G35760.1 (AT4G35760.1 NAD(P)H dehydrogenase (quinone)s) HSP 1 Score: 397.5 bits (1020), Expect = 9.2e-111 Identity = 205/338 (60.65%), Postives = 254/338 (75.15%), Query Frame = 1
BLAST of Cucsa.044020 vs. NCBI nr
Match: gi|778719843|ref|XP_011658067.1| (PREDICTED: thiol-disulfide oxidoreductase LTO1 [Cucumis sativus]) HSP 1 Score: 746.1 bits (1925), Expect = 3.0e-212 Identity = 380/384 (98.96%), Postives = 380/384 (98.96%), Query Frame = 1
BLAST of Cucsa.044020 vs. NCBI nr
Match: gi|659080616|ref|XP_008440888.1| (PREDICTED: thiol-disulfide oxidoreductase LTO1 [Cucumis melo]) HSP 1 Score: 703.0 bits (1813), Expect = 2.9e-199 Identity = 355/380 (93.42%), Postives = 366/380 (96.32%), Query Frame = 1
BLAST of Cucsa.044020 vs. NCBI nr
Match: gi|1009159535|ref|XP_015897865.1| (PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Ziziphus jujuba]) HSP 1 Score: 455.7 bits (1171), Expect = 8.1e-125 Identity = 225/337 (66.77%), Postives = 268/337 (79.53%), Query Frame = 1
BLAST of Cucsa.044020 vs. NCBI nr
Match: gi|823138842|ref|XP_012469260.1| (PREDICTED: thiol-disulfide oxidoreductase LTO1 [Gossypium raimondii]) HSP 1 Score: 449.9 bits (1156), Expect = 4.4e-123 Identity = 222/336 (66.07%), Postives = 272/336 (80.95%), Query Frame = 1
BLAST of Cucsa.044020 vs. NCBI nr
Match: gi|763750155|gb|KJB17543.1| (hypothetical protein B456_003G004900 [Gossypium raimondii]) HSP 1 Score: 449.9 bits (1156), Expect = 4.4e-123 Identity = 222/336 (66.07%), Postives = 272/336 (80.95%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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