Cucsa.042230 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.042230
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Photosystem I reaction center subunit V family protein
Location	scaffold00540 : 710719 .. 711615 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAATTCATCCAACTCAACTCCCAAAATCTCCCTTCCTCCGATTCTCATCCTCACAATCTATATCGCTTTTCTCAACTAAATTATATGATCCTCACATAGCCTCCCTCAATTATCCACTCCATATCTCTCACACACAACAATATCACCACACCATCAATGGCCGCCGCCGCCTCCTCCTCCGCTGTCTTCGCCGCCCCGACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAACCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCTCCCCAGCGTGAAATCCAGCCGGTCGGTTGTCGCCACAAAGAGCCGGAGATCGATGACGGTGAAGGCGGAACTCAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGTCCTTGTTCTTAGGGAGGTTTGTGTTCTTCAATTTCCAAAGGGAGAATGTGGGCAAGCAAGTGCCAGAGCAAAATGGGCTAACTCATTTTGAGGCTGGTGATGTTAGGGCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCAATTGGTCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCTAAGTTCTTCTAGCTGTTGTTATTACTGTGGCTTTGTATAGCTAAATCCACCATTTATTGCTTTTGAAAAACTTTGCTTTTGTATCTTTCTCTAATGGGGTTTTTGTGGAATGATATTGGGAAAATGGGAAGATGGGGTTTGTGAGTTATGTTGTCTACTGATTATTATTGCAAATGTAACTTTGTTGTTTTGGATGATGAACTCACAATATGAGTGTAGAATTGTTACATTTTTATGGATGTATTAATTAATTACATGATTTTGTGAACATAA

mRNA sequence

ATCAAATTCATCCAACTCAACTCCCAAAATCTCCCTTCCTCCGATTCTCATCCTCACAATCTATATCGCTTTTCTCAACTAAATTATATGATCCTCACATAGCCTCCCTCAATTATCCACTCCATATCTCTCACACACAACAATATCACCACACCATCAATGGCCGCCGCCGCCTCCTCCTCCGCTGTCTTCGCCGCCCCGACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAACCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCTCCCCAGCGTGAAATCCAGCCGGTCGGTTGTCGCCACAAAGAGCCGGAGATCGATGACGGTGAAGGCGGAACTCAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGTCCTTGTTCTTAGGGAGGTTTGTGTTCTTCAATTTCCAAAGGGAGAATGTGGGCAAGCAAGTGCCAGAGCAAAATGGGCTAACTCATTTTGAGGCTGGTGATGTTAGGGCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCAATTGGTCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCTAAGTTCTTCTAGCTGTTGTTATTACTGTGGCTTTGTATAGCTAAATCCACCATTTATTGCTTTTGAAAAACTTTGCTTTTGTATCTTTCTCTAATGGGGTTTTTGTGGAATGATATTGGGAAAATGGGAAGATGGGGTTTGTGAGTTATGTTGTCTACTGATTATTATTGCAAATGTAACTTTGTTGTTTTGGATGATGAACTCACAATATGAGTGTAGAATTGTTACATTTTTATGGATGTATTAATTAATTACATGATTTTGTGAACATAA

Coding sequence (CDS)

ATGGCCGCCGCCGCCTCCTCCTCCGCTGTCTTCGCCGCCCCGACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAACCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCTCCCCAGCGTGAAATCCAGCCGGTCGGTTGTCGCCACAAAGAGCCGGAGATCGATGACGGTGAAGGCGGAACTCAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGTCCTTGTTCTTAGGGAGGTTTGTGTTCTTCAATTTCCAAAGGGAGAATGTGGGCAAGCAAGTGCCAGAGCAAAATGGGCTAACTCATTTTGAGGCTGGTGATGTTAGGGCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCAATTGGTCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCTAAGTTCTTCTAG

Protein sequence

MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF*

Homology

[Close]

BLAST of Cucsa.042230 vs. Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-54
Identity = 116/165 (70.30%), Postives = 127/165 (76.97%), Query Frame = 1


Query: 2   AAAASSSAVFAAPTFSATATRQQPNP----TTISFQGLRALP----SVKSSRSVVATKSR 61
           AA AS S+   AP  S     QQ +        SF GLR L     S  SS S+  + +R
Sbjct: 3   AATASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSSAR 62

Query: 62  RSMTVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKE 121
           RSMT +AEL+PSLVISLSTGLSLFLGRFVFFNFQREN+ KQVPEQNG++HFEAGD RAKE
Sbjct: 63  RSMTCRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKE 122

Query: 122 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Sbjct: 123 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167

[Close]

BLAST of Cucsa.042230 vs. Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.0e-52
Identity = 113/160 (70.62%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 4   AASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSV--VATKSRRSMT--VK 63
           A S+SA+ +  TFS   + + PN  +ISF GLR L    SS ++  ++T  R+S +  V+
Sbjct: 2   ATSASALLSPTTFSTAISHKNPN--SISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 64  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLL 123
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG THFEAGD RAKEYVSLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 124 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

[Close]

BLAST of Cucsa.042230 vs. Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.7e-48
Identity = 98/143 (68.53%), Postives = 115/143 (80.42%), Query Frame = 1


Query: 18  ATATRQQPNPTTISFQGLRALPSVKSSRSV--VATKSRRSMTVKAELNPSLVISLSTGLS 77
           AT+T    +P  ++  GLR  PS +++ S   V+  +RRS+  +A L PS+VISLSTGLS
Sbjct: 2   ATSTAAVLSPPAVA--GLRLAPSPRAAASFRGVSPPARRSVAARAALEPSVVISLSTGLS 61

Query: 78  LFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWG 137
           L +GRFVFFNFQRENV KQVPEQNG THFEAGD RAKE+  +LKSNDPVGFN+VDVLAWG
Sbjct: 62  LVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWG 121

Query: 138 SIGHIVAYYILATSSNGYDPKFF 159
           SIGHIVAYYILAT+SNGYDP FF
Sbjct: 122 SIGHIVAYYILATTSNGYDPPFF 142

[Close]

BLAST of Cucsa.042230 vs. Swiss-Prot
Match: PSAG_TORRU (Photosystem I reaction center subunit V, chloroplastic OS=Tortula ruralis GN=PSAG PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.2e-19
Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 1


Query: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLLKSN 122
           N S +IS ST   L LGRFVF  FQR  V +  +PEQNG+          + + S+LK+N
Sbjct: 17  NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTN 76

Query: 123 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD 155
           DP GF +VDVLAWG++GH V ++ILAT++NGY+
Sbjct: 77  DPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109

[Close]

BLAST of Cucsa.042230 vs. Swiss-Prot
Match: PSAG_CHLRE (Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAG PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 1


Query: 33  QGLRALPSVKSSRSVVATKSRR-SMTVKAELNPSLVISLSTGLSLFLGRFVFFNFQRE-- 92
           Q L + PS+++S  V   ++ R ++  KA L+P +VIS ST   L +GRFVF  +QR   
Sbjct: 2   QTLASRPSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREA 61

Query: 93  NVGKQV-PEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT 151
           N    V P+  G T+F+  D++     ++  +NDP GFNI+DV  WG++GH V + +LA 
Sbjct: 62  NFDSTVGPKTTGATYFD--DLQKNS--TIFATNDPAGFNIIDVAGWGALGHAVGFAVLAI 119

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BLAST of Cucsa.042230 vs. TrEMBL
Match: A0A0A0L4W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G060980 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.6e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Cucsa.042230 vs. TrEMBL
Match: M5W1I7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012567mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-57
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 1


Query: 4   AASSSAVFAAPTFSATATRQ---QPNPTTISFQGLRAL----PSVKSSRSVVATKSRRSM 63
           AASSS +F+AP  S+T +R    Q +PT ISFQGLR L    PS K S S   TK R + 
Sbjct: 2   AASSSTLFSAPAISSTISRSHTHQLSPTQISFQGLRPLTKAAPSTKLSFSAPNTK-RSTG 61

Query: 64  TVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYV 123
            V+AELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG+THFEAGD RAKEYV
Sbjct: 62  VVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYV 121

Query: 124 SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 163

[Close]

BLAST of Cucsa.042230 vs. TrEMBL
Match: F6I4W8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01760 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.7e-54
Identity = 117/159 (73.58%), Postives = 125/159 (78.62%), Query Frame = 1


Query: 6   SSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSM------TVK 65
           +SSA F+APTFS+ AT  Q +    SFQGLR L         +   S R +       V+
Sbjct: 2   ASSAFFSAPTFSSAATTLQKHLPHQSFQGLRPLSKPTDLSLTIPRMSTRPIPKRSAGVVR 61

Query: 66  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLK 125
           AELN SLVISLSTGLSLFLGRFVFFNFQRENV KQVP+QNGLTHFEAGD RAKEYVSLLK
Sbjct: 62  AELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKEYVSLLK 121

Query: 126 SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 160

[Close]

BLAST of Cucsa.042230 vs. TrEMBL
Match: A0A0J8CS02_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065490 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-53
Identity = 113/161 (70.19%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 4   AASSSAVFAAPTFSATATRQQPNP----TTISFQGLRALP--SVKSSRSVVATKSRRSMT 63
           +A+++ + ++   +A +++QQ N      +ISF GLR L    +K++     ++SRRSMT
Sbjct: 2   SATTAGLSSSSLLAACSSKQQHNVHVQVKSISFSGLRPLKLNMLKTNSKFSTSESRRSMT 61

Query: 64  VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSL 123
            +AEL+PSLVISLSTGLSLFLGRFVFFNFQREN+ KQVPEQNGLTHFEAGD RAKEYVSL
Sbjct: 62  CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGLTHFEAGDSRAKEYVSL 121

Query: 124 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           LKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDPKFF
Sbjct: 122 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPKFF 162

[Close]

BLAST of Cucsa.042230 vs. TrEMBL
Match: A5BMA7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026412 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.8e-53
Identity = 116/159 (72.96%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 6   SSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSM------TVK 65
           +SSA F+APTFS+ AT  Q +     FQGLR L         +   S R +       V+
Sbjct: 2   ASSAFFSAPTFSSAATTLQKHLPHQYFQGLRPLSKPTDLSLTIPRMSTRPIPKRSAGVVR 61

Query: 66  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLK 125
           AELN SLVISLSTGLSLFLGRFVFFNFQRENV KQVP+QNGLTHFEAGD RAKEYVSLLK
Sbjct: 62  AELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKEYVSLLK 121

Query: 126 SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 160

[Close]

BLAST of Cucsa.042230 vs. TAIR10
Match: AT1G55670.1 (AT1G55670.1 photosystem I subunit G)

HSP 1 Score: 207.6 bits (527), Expect = 5.6e-54
Identity = 113/160 (70.62%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 4   AASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSV--VATKSRRSMT--VK 63
           A S+SA+ +  TFS   + + PN  +ISF GLR L    SS ++  ++T  R+S +  V+
Sbjct: 2   ATSASALLSPTTFSTAISHKNPN--SISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 64  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLL 123
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG THFEAGD RAKEYVSLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 124 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

[Close]

BLAST of Cucsa.042230 vs. NCBI nr
Match: gi|449463699|ref|XP_004149569.1| (PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 6.6e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Cucsa.042230 vs. NCBI nr
Match: gi|659096380|ref|XP_008449063.1| (PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   AAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAEL 62
           AAASSSAVF APTFSATATRQQP+PTTISFQGLRALPSVKSSRS+VATK+RRSMTVKAEL
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAEL 61

Query: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 122
           NPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEYVSLLKSND
Sbjct: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121

Query: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of Cucsa.042230 vs. NCBI nr
Match: gi|694439637|ref|XP_009346691.1| (PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 126/162 (77.78%), Postives = 136/162 (83.95%), Query Frame = 1


Query: 4   AASSSAVFAAPTFSATATR--QQPNPTTISFQGLRAL----PSVKSSRSVVATKSRRSMT 63
           AA+SSA+F+AP+ S+TA R  Q  +PT ISFQGLR L    P  K      +T+ RRS  
Sbjct: 2   AATSSALFSAPSISSTAARHHQALSPTQISFQGLRPLTKSSPPTKLGLIAPSTR-RRSCV 61

Query: 64  VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVS 123
           VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG+THFEAGD RAKEYVS
Sbjct: 62  VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVS 121

Query: 124 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 162

[Close]

BLAST of Cucsa.042230 vs. NCBI nr
Match: gi|657951671|ref|XP_008353954.1| (PREDICTED: photosystem I reaction center subunit V, chloroplastic [Malus domestica])

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 126/162 (77.78%), Postives = 136/162 (83.95%), Query Frame = 1


Query: 4   AASSSAVFAAPTFSATATR--QQPNPTTISFQGLRAL----PSVKSSRSVVATKSRRSMT 63
           AA+SSA+F+AP+ S+TATR  Q  +PT ISFQGLR L    P  K      +T+ R S  
Sbjct: 2   AATSSALFSAPSISSTATRHHQTLSPTQISFQGLRPLTKSSPPTKLGLHAPSTR-RSSCV 61

Query: 64  VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVS 123
           VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG+THFEAGD RAKEYVS
Sbjct: 62  VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVS 121

Query: 124 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 162

[Close]

BLAST of Cucsa.042230 vs. NCBI nr
Match: gi|645215745|ref|XP_008246328.1| (PREDICTED: photosystem I reaction center subunit V, chloroplastic [Prunus mume])

HSP 1 Score: 229.2 bits (583), Expect = 5.1e-57
Identity = 127/163 (77.91%), Postives = 135/163 (82.82%), Query Frame = 1


Query: 4   AASSSAVFAAPTFSATATRQ---QPNPTTISFQGLRAL----PSVKSSRSVVATKSRRSM 63
           AASSS +F+AP  S+T +R    Q +PT ISFQGLR L    PS K S S   TK R S 
Sbjct: 2   AASSSTLFSAPAISSTISRSHTHQLSPTQISFQGLRPLTKAAPSTKLSFSAPNTK-RSSG 61

Query: 64  TVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYV 123
            V+AELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG+THFEAGD RAKEYV
Sbjct: 62  VVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYV 121

Query: 124 SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 163

The following BLAST results are available for this feature:

BLAST of Cucsa.042230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSAG_SPIOL	2.4e-54	70.30	Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=P...	[more]
PSAG_ARATH	1.0e-52	70.63	Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana G...	[more]
PSAG_HORVU	5.7e-48	68.53	Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSA...	[more]
PSAG_TORRU	7.2e-19	50.54	Photosystem I reaction center subunit V, chloroplastic OS=Tortula ruralis GN=PSA...	[more]
PSAG_CHLRE	1.1e-14	39.34	Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhard...	[more]

BLAST of Cucsa.042230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4W3_CUCSA	4.6e-81	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G060980 PE=4 SV=1	[more]
M5W1I7_PRUPE	8.0e-57	77.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012567mg PE=4 SV=1	[more]
F6I4W8_VITVI	3.7e-54	73.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01760 PE=4 SV=...	[more]
A0A0J8CS02_BETVU	1.4e-53	70.19	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065490 PE=4 S...	[more]
A5BMA7_VITVI	1.8e-53	72.96	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026412 PE=4 SV=1	[more]

BLAST of Cucsa.042230 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55670.1	5.6e-54	70.63	photosystem I subunit G	[more]

BLAST of Cucsa.042230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463699\|ref\|XP_004149569.1\|	6.6e-81	100.00	PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis sativ...	[more]
gi\|659096380\|ref\|XP_008449063.1\|	1.2e-77	96.79	PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]	[more]
gi\|694439637\|ref\|XP_009346691.1\|	2.3e-57	77.78	PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Pyrus x ...	[more]
gi\|657951671\|ref\|XP_008353954.1\|	2.3e-57	77.78	PREDICTED: photosystem I reaction center subunit V, chloroplastic [Malus domesti...	[more]
gi\|645215745\|ref\|XP_008246328.1\|	5.1e-57	77.91	PREDICTED: photosystem I reaction center subunit V, chloroplastic [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000549	PSI_PsaG/PsaK
IPR016370	PSI_PsaG/PsaK_pln
IPR017494	PSI_PsaG_pln
IPR023618	PSI_PsaG/PsaK_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0009522	photosystem I
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **Molecular Function**
Term	Definition
GO:0016168	chlorophyll binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0009780	photosynthetic NADP+ reduction
biological_process	GO:0042550	photosystem I stabilization
biological_process	GO:0050821	protein stabilization
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0030093	chloroplast photosystem I
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.042230.1	Cucsa.042230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 63..153 score: 2.9
IPR000549	Photosystem I PsaG/PsaK protein	PROSITE	PS01026	PHOTOSYSTEM_I_PSAGK	coord: 125..142 scor
IPR016370	Photosystem I PsaG/PsaK, plant	PIR	PIRSF002912	PsaK	coord: 1..158 score: 2.7
IPR017494	Photosystem I PsaG, plant	TIGRFAMs	TIGR03051	TIGR03051	coord: 67..154 score: 1.5
IPR023618	Photosystem I PsaG/PsaK domain	GENE3D	G3DSA:1.10.286.40		coord: 65..158 score: 9.4
None	No IPR available	PANTHER	PTHR34195	FAMILY NOT NAMED	coord: 20..158 score: 4.8
None	No IPR available	PANTHER	PTHR34195:SF1	SUBFAMILY NOT NAMED	coord: 20..158 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.042230	Cla004483	Watermelon (97103) v1	cgywmB017
Cucsa.042230	Csa3G060980	Cucumber (Chinese Long) v2	cgycuB014
Cucsa.042230	MELO3C014124	Melon (DHL92) v3.5.1	cgymeB013
Cucsa.042230	ClCG10G004510	Watermelon (Charleston Gray)	cgywcgB018
Cucsa.042230	CSPI03G04330	Wild cucumber (PI 183967)	cgycpiB015
Cucsa.042230	CmoCh16G009880	Cucurbita moschata (Rifu)	cgycmoB0027
Cucsa.042230	Lsi05G005160	Bottle gourd (USVL1VR-Ls)	cgylsiB015
Cucsa.042230	Cp4.1LG14g07740	Cucurbita pepo (Zucchini)	cgycpeB0026
Cucsa.042230	Cp4.1LG08g08420	Cucurbita pepo (Zucchini)	cgycpeB0028
Cucsa.042230	MELO3C014124.2	Melon (DHL92) v3.6.1	cgymedB016
Cucsa.042230	CsaV3_3G004330	Cucumber (Chinese Long) v3	cgycucB017
Cucsa.042230	Cla97C10G188950	Watermelon (97103) v2	cgywmbB016
Cucsa.042230	Bhi11G000382	Wax gourd	cgywgoB016
Cucsa.042230	Carg22341	Silver-seed gourd	carcgyB0660

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.042230	Wax gourd	cgywgoB017
Cucsa.042230	Cucurbita maxima (Rimu)	cgycmaB0029
Cucsa.042230	Cucurbita maxima (Rimu)	cgycmaB0030
Cucsa.042230	Cucurbita maxima (Rimu)	cgycmaB0032
Cucsa.042230	Cucurbita maxima (Rimu)	cgycmaB0033
Cucsa.042230	Cucurbita moschata (Rifu)	cgycmoB0030
Cucsa.042230	Cucurbita pepo (Zucchini)	cgycpeB0027
Cucsa.042230	Cucurbita pepo (Zucchini)	cgycpeB0029
Cucsa.042230	Bottle gourd (USVL1VR-Ls)	cgylsiB014
Cucsa.042230	Silver-seed gourd	carcgyB0007
Cucsa.042230	Silver-seed gourd	carcgyB0404