Cucsa.040660 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.040660
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionVesicle transport protein, Got1/SFT2-like protein
Locationscaffold00529 : 110907 .. 115619 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAAGCTCAGCGAAGGCGTATTTGTCGATGAAGAGCGTAGTCAGAGCTTGTTGGATGAAGATTCAGAAGACCTATGCTCTCTAACTGCTGTACAGGTACTTTAATCAACGATCATACAGTCTCCTCTTATGCAAATTTTCATGGGTTTTGCTCACTTTTCTTTCTTCTTCCTCTTCTTCTTTTTTTCTGAACAGAGACTGTACGCTTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTTGGTATGAACATTTGACCCACTTCCATGTTTAAACAGAATTTTACTTGCCTTTATGTTTTGTACATTTTTTGTTTGTGGGGAATTTTGATGATAATATTGGGTTTGGGTCTCAAGCTAAGCTCTGGGTATGACTAGTAACTTGGGTTTTCTCTGTATCCATTGCTTATTTTGGGATTTAGTAAGATGCATATTCTGTAACTATCCACTGGTTGGAGTTGGCCCTTGAGGCTTGAAGTGTAAATTGAAAAACACAACAAAGAAGGAACGTGGTATAAATCTGGATAGGAAGCTAAGGAATTTCCTCCAAGAACTAAAATGGGGGTACTGAAGAAAAATTAAGTTGCTTGGTCAATTGGGAGACTTTCTACCAATTGAAAATGGAGGACTCTTGATGAGGATTTAAGGTAGAAAAGTGCACCTCAATTATCAATTTGATATGGAGACATTTGACTGAATATGATGAAATGTGGGAATGGGATTTTATCCGTTAGCTATGGGAGAGTATAGAGGATATTTTTCAAGTAAGGAGGGTTGGATGCTACTTCTTTCAATTGGTATCATAGTTATGATCTAAACCTAGCTGTTCGGGTGAGATCCTTAGCGATTTCAAACAAAAGTAGTGAATATCATAGACGAATCCCCAAATCGGACAAAAAGTACTTGGAGCAACAAGCAAGTAATAACTCTATCAAGCTCACTGGTAGAGAAGTAGATCTTTGTTTGAGGGGAAGAGATCATGGGTCTGACAGGTGCTCAACACGAAGTGTACACAAAAATGATTGTGTTTGTGTTCTATCTGACTTTGCAATTGGGCATTGAGAAGAGCAAGCTCACTTAGGCAATTGAGAGTGGACAAATAATTGGGTGATTTTTTGTTCGAGGTGAGGATTGTTAGGAGTGGAAACAAAGTCGCATATTGGTTAGGGAATGAAGTGAAAAGTGATTGTGAGTACATAAGTGAAGACAATTATCTTCATTGGTACGAGACATTTTGGGTGGTAATAAAAGTAAAGTCATGAAGGTTTATGCTAAAATGGATAATATCATACCATTGTGGTGACTGGTGGAGGTTTCATTGTCCTTATCAAGGTGAAGCTTGAGAGGATGTCCTTGGAGTTTAAGCATGACATCCACAAAGAGCTTAACTGAACCAGAAATGGGCAGTGAGCATTAAGCAAGGAATTGTCAACGGCAATCTGGAAGGAAAGAAGCCATAGAGAAGTCAACTTCTCAGTGTAGGCATTATGACATGAGGGTAAAAATTAAGCTGTAGGGAGGGGACTCAAAGGAGAAATTTTGGTTTTAAAATCCAGTTAGTTTGTTTTTTGTTGCAATGAAGAAAAGAAACACGATCACCTGTCTTTTCGCTGTTATTAACTTTAAGCTGTATTGCAAATCTCAACTCAATAAAATGCAGTGCACTTAGGCTCTTGTCAAGTCAGTCAAAGACAAGGAGTAATGTCCCATTGTTATCAAGATGCAGACTTGAGAAAAAGGATAAAATCATATGGATTATTGCAGTAAAAAAAAACTCATGGGGTACTAGTGAATACAGGGTTCACAAGCTAAAATTTTCTTCATTATTGAATTATCATAATCAGTAAACAATAAGACTATTCAAGAGTTAAGGTTAATTGTCAATAACATAATATATTGCAGGCGATTGGCTCTACTAGATTGGGGGATGGAGTTTAAAAAGCTTATTGGTTCCTCAAATAGTCTGGAGTGTTTTGTTTCTACTCAGCCTTTATTAAATTAACCAAAATCAGCCAAAAACTTAAAAGACCCTATAATCATGCTGATTTGGAAGTTTAATGTTCCAAAGAAGATAAAAGTTTTTCTCTGGAATCTTGGCCATAAAATAATGAATGCTCAAGAAAGCTTAGGAACCACAACATTAACCCTTCAGTCTGTTTTTTGTGCTTAAAAGGAGAATAAAACACTGAGCTTCTTTCTCTTTGAGGGGATGGGAACAACTACCTAAGAATTTTGGTTTATGCTCTTGTTTACCTGAGAAGATGGGGATTGGCTTATTGAAGCCATGAATGGGGGTAGAATCTAAAGGAAAGATGAGAATTTTTTAGAGATGTGTCGCAGTGTGTTTGTGTGGGAGCTTTTGAAAGAATAAAGCGTAAGGATCTCTGAATATAAGTTGCTTGCTTTTGATGATTTTTGTAATTTTTTTAAAATTACATCCTTGATGTGAAGTCTTCACAAGGATTCTTTTTACAGCATAGCTGCAAAGAAATCCTCCAAAATTGGGAGGCTGGGTTAGTTGTCAACTGTGACCGGGCTCCTTACCCCCTAGGCTGTGTTCTTTTTTTTTTTTTGTGATGAATACATATGAGTTTCGATTAATATATATACACACACGGACGCACACATTGCAGGCTAATCTTTGTGTAATAGTGTTGTACTCTTTCACCCTTTAGTATCAATTGATGATTTTGTTTAGGAGTGTAAATGGGTTGGGTTAGGTAGATTTTTTGGACCAACTCGAATTTTTGGGTTGGTCAAATTGACAACCCAAATAACCCAAACAAGATCTTCAACTTAACCCAACCAAACCCGAAATTTGAGAGTTGGGTTGTCAGTTTATTTCTTTTCTTTTCTTTTTTTAAGTATATTATTTATTAACTTAAAATACTTAAATTTGTCTACAACACATTTTAATAACTAAAATTTCATAAAATTCAAATGAAATATAAAACTCAATTGAAATAAGTGTTAAATATCAAAATTCAACATATCTATTTACAAACTTCAAATAAACTTCATAATGATATGTATGAATTATAATATTTATAAGTTATATATATTTTAATAATATTAGAAATTCGAGTTGGGTTGGGTCAACCCGGATTTTTAAAAATGTAACCCGAACCCAGCCCAATAAAGAAAAAAACATAAAAAATTCATGTTGTATGGGCTGTCGGTTTATTTGAACACCCCTAATTTTGTTCATTGCTTCCCTTTTTCTTTTCTTCGTTGGTGACTTTTTTAAATCTCCGTGTTCTTTTGTCTTAAGTTCCATTTGGATTTCTATGATTCTACATTGATATATCATAGTGTCATTGATTTCAGTTTTGCTCATTATCTGAACCCGTGCTTATTAAGTGAGAAATTTGATCCGTTTACTACATTTTCTTCTTCTTGCAGTCATTACTTGTTTTTGCTAAGCCACTCAAACTTGCTGTACTTTTTGCATTTGGCAATGTTTTGGCAGTTGGAAGGTATAACCATTAAATTAGAAACCTGTTGTTTTTGTTATATTGTAAATATGTCAGTAGTAAAGAAGTATTATTTGGAGGAGTACTTTTGTTCACTTTCATTGCATTCTCACTTGCATTTAATACTTCTTGTAATCTTCTATCTCATATATTTCTATCAAGAAGAAGGTTTTTTTTATTTTTCAAACAAGAGGAAGATAATCGTGGGGGAAAACTTTTTACGTATTTCCAATGTGTTATTCCTTTTCCTTGAGGTGTTAATATTCCAAATTGCACCTTATTTGGCAGCACAACTTTCCTATTTGGACCTAGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTCTTGCGACAGCTATTTACCTAGGATGTGTTGTTCTAGCTCTTATATGTGCTCTCTGGGTAAGTCACTATTCTGACTATATGACATATACAAGAAAGCGGACTTAAATTGCTAATGCATTAAGGTATTCAATGAACAATCTTCAATTAATCTGTGGAACACAATGTTAATGGCATTCGTATTAGGTTCCTCTTCAGCTGTTTCACAAGGTTCCCAAATACGGTTTTGCATTTTTTCTTTAACAAATAAAAGCATGTAATGTATCAAAATGTTATATCAACCTAGGATGGACTTATGCAAACAGTTATTGTCTCATATTGTCTTTTAACTGAGTTTCATTGCTATTCATTTTTCATTTTTCAGATCCACAATAAGATATTGACAGTGATTGCAATAATAAGCGAGATATGTGCACTAATATGGTACGTTTACTTCTATCAATTGCCATCGTCCACTCAATTCAAGTTCCATTTAAAACTAGAGGATGAAAAGACATTTCCAGTCAGTGAAAATGTGTCCAGTCATATCTTGCGAGACTCTTCTTGCATCTAAACTAGATTAGATCATAACTTTCTTGGTTTATCATGTTCCAGGTATAGTTTGAGCTATATCCCTTTTGCCCGGAGGATGGTCTCTCAATTGATGATCCGATTTTGTGATACGGAACTATAGACAATGAAACATGCGATAATGATTGACGATTCAATGTTTCAAGATCTGAGATTGTTTTTTGTCTTGGTTTTTTTTCACATTTTAGTGAGCACAACACCGGTTGGAGATTTGTTTTTTTCTTATTTTTTTTGGTCGAAGTTGAGTTTGTCTACATAAATGTATAATCCAAAAGTCAGTTCAATGCTTGTGCTAATTTTTTAAATATAATAGCAT

mRNA sequence

ATGTGGAAGCTCAGCGAAGGCGTATTTGTCGATGAAGAGCGTAGTCAGAGCTTGTTGGATGAAGATTCAGAAGACCTATGCTCTCTAACTGCTGTACAGAGACTGTACGCTTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTTGTCATTACTTGTTTTTGCTAAGCCACTCAAACTTGCTGTACTTTTTGCATTTGGCAATGTTTTGGCAGTTGGAAGCACAACTTTCCTATTTGGACCTAGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTCTTGCGACAGCTATTTACCTAGGATGTGTTGTTCTAGCTCTTATATGTGCTCTCTGGATCCACAATAAGATATTGACAGTGATTGCAATAATAAGCGAGATATGTGCACTAATATGGTATAGTTTGAGCTATATCCCTTTTGCCCGGAGGATGGTCTCTCAATTGATGATCCGATTTTGTGATACGGAACTATAGACAATGAAACATGCGATAATGATTGACGATTCAATGTTTCAAGATCTGAGATTGTTTTTTGTCTTGGTTTTTTTTCACATTTTAGTGAGCACAACACCGGTTGGAGATTTGTTTTTTTCTTATTTTTTTTGGTCGAAGTTGAGTTTGTCTACATAAATGTATAATCCAAAAGTCAGTTCAATGCTTGTGCTAATTTTTTAAATATAATAGCAT

Coding sequence (CDS)

ATGTGGAAGCTCAGCGAAGGCGTATTTGTCGATGAAGAGCGTAGTCAGAGCTTGTTGGATGAAGATTCAGAAGACCTATGCTCTCTAACTGCTGTACAGAGACTGTACGCTTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTTGTCATTACTTGTTTTTGCTAAGCCACTCAAACTTGCTGTACTTTTTGCATTTGGCAATGTTTTGGCAGTTGGAAGCACAACTTTCCTATTTGGACCTAGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTCTTGCGACAGCTATTTACCTAGGATGTGTTGTTCTAGCTCTTATATGTGCTCTCTGGATCCACAATAAGATATTGACAGTGATTGCAATAATAAGCGAGATATGTGCACTAATATGGTATAGTTTGAGCTATATCCCTTTTGCCCGGAGGATGGTCTCTCAATTGATGATCCGATTTTGTGATACGGAACTATAG

Protein sequence

MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL*
Homology
[Close]
BLAST of Cucsa.040660 vs. Swiss-Prot
Match: SFT2B_HUMAN (Vesicle transport protein SFT2B OS=Homo sapiens GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 57/146 (39.04%), Postives = 81/146 (55.48%), Query Frame = 1 

Query: 18  LLDEDSEDLCSLTAV---------QRLYAFGGCLTGGVVCMILSLLVFAKPLK----LAV 77
           L  +D+ED   L+ V          R+  F  C   G++C +L  ++   P K     AV
Sbjct: 8   LSGQDTEDRSGLSEVVEASSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPRKGLHLFAV 67

Query: 78  LFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVI 137
            + FGN+ ++GST FL GP +Q++ MF+  R++AT + L C  L L  A W HNK L +I
Sbjct: 68  FYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGLALI 127

Query: 138 AIISEICALIWYSLSYIPFARRMVSQ 151
             I +  AL WYSLS+IPFAR  V +
Sbjct: 128 FCILQSLALTWYSLSFIPFARDAVKK 153

[Close]
BLAST of Cucsa.040660 vs. Swiss-Prot
Match: SFT2B_MOUSE (Vesicle transport protein SFT2B OS=Mus musculus GN=Sft2d2 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 1 

Query: 18  LLDEDSEDLCSLTAV---------QRLYAFGGCLTGGVVCMILSLLVFAKPLK----LAV 77
           L  +D+ED   L+ V          R+  F  C   G++C +L  L+   P K     AV
Sbjct: 8   LSGQDTEDRSGLSEVVEASSLSWGTRIKGFIACFALGILCSVLGTLLLWVPRKGLGLFAV 67

Query: 78  LFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVI 137
            +  GN++++GST FL GP +Q++ MF+  R++AT + L C  L L C+ ++ NK L +I
Sbjct: 68  FYTLGNIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVLLCFALTL-CSAFLWNKGLALI 127

Query: 138 AIISEICALIWYSLSYIPFARRMVSQ 151
             I +  AL WYSLSYIP+AR  V +
Sbjct: 128 FCILQSLALTWYSLSYIPYARDAVKK 152

[Close]
BLAST of Cucsa.040660 vs. Swiss-Prot
Match: SFT2A_HUMAN (Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 55/127 (43.31%), Postives = 73/127 (57.48%), Query Frame = 1 

Query: 25  DLCSLTAVQRLYAFGGCLTGGVVCMILS--LLVFAKPLKL-AVLFAFGNVLAVGSTTFLF 84
           D  SL+   RL  F  C   GV   IL   LL     +KL AV +  GN+ A+ ST FL 
Sbjct: 24  DASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGGIKLFAVFYTLGNLAALASTCFLM 83

Query: 85  GPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYI 144
           GP +Q++ MF++ R+LAT + L C +  L  ALW H K L V+  I +  ++ WYSLSYI
Sbjct: 84  GPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSYI 143

Query: 145 PFARRMV 149
           P+AR  V
Sbjct: 144 PYARDAV 150

[Close]
BLAST of Cucsa.040660 vs. Swiss-Prot
Match: SFT2A_RAT (Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 1 

Query: 25  DLCSLTAVQRLYAFGGCLTGGVVCMILS--LLVFAKPLKL-AVLFAFGNVLAVGSTTFLF 84
           D  SL+   RL  F  C   G+   IL   LL     +KL AV +  GN+ A+ ST FL 
Sbjct: 24  DASSLSFNTRLKWFVICFVAGIFFSILGTGLLWLPNGVKLFAVFYTLGNLAALASTCFLM 83

Query: 85  GPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYI 144
           GP +Q++ MF++ R+LAT I L C+V  L  ALW   K L ++  I +  ++ WYSLSYI
Sbjct: 84  GPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFCILQFLSMTWYSLSYI 143

Query: 145 PFARRMV 149
           P+AR  V
Sbjct: 144 PYARDAV 150

[Close]
BLAST of Cucsa.040660 vs. Swiss-Prot
Match: SFT2A_MOUSE (Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-17
Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 1 

Query: 25  DLCSLTAVQRLYAFGGCLTGGVVCMILS--LLVFAKPLKL-AVLFAFGNVLAVGSTTFLF 84
           D  SL+   RL  F  C   G+    L   LL     +KL AV +  GN+ A+ ST FL 
Sbjct: 24  DASSLSFNTRLKWFVICFVAGIFFSFLGTGLLWLPNGMKLFAVFYTLGNLAALASTCFLM 83

Query: 85  GPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYI 144
           GP +Q++ MF++ R+LAT I L C+V  L  ALW   K L ++  I +  ++ WYSLSYI
Sbjct: 84  GPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFCILQFLSMTWYSLSYI 143

Query: 145 PFARRMV 149
           P+AR  V
Sbjct: 144 PYARDAV 150

[Close]
BLAST of Cucsa.040660 vs. TrEMBL
Match: A0A0A0LC39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603050 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.0e-83
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1 

Query: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60
           MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL
Sbjct: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60

Query: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120
           KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI
Sbjct: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120

Query: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL
Sbjct: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 160

[Close]
BLAST of Cucsa.040660 vs. TrEMBL
Match: A0A059DEZ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01469 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.7e-59
Identity = 115/161 (71.43%), Postives = 134/161 (83.23%), Query Frame = 1 

Query: 1   MWKLSEGVFVDEERSQS-LLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKP 60
           MWKLS+ +F  EE  Q  +L EDS+ +CSL+ +QR+YAFG CL  G+VCM LSL+VFAKP
Sbjct: 1   MWKLSQSLFGGEEEGQDEVLAEDSDGICSLSPMQRVYAFGACLLVGLVCMFLSLIVFAKP 60

Query: 61  LKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNK 120
           +K AV+F  GN+LAVGST FL G  QQ+RMMFDS R+ ATAIYLGCV LALICALWIH+K
Sbjct: 61  IKFAVVFTCGNLLAVGSTVFLIGAAQQMRMMFDSTRVFATAIYLGCVALALICALWIHSK 120

Query: 121 ILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           +LT+IAII EICALIWYSLSYIPFARRMVS LM+R CDTEL
Sbjct: 121 VLTIIAIIIEICALIWYSLSYIPFARRMVSDLMVRLCDTEL 161

[Close]
BLAST of Cucsa.040660 vs. TrEMBL
Match: A0A067E770_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031391mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-57
Identity = 107/160 (66.88%), Postives = 132/160 (82.50%), Query Frame = 1 

Query: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60
           MWKL + V  DEER +S L+++S+ +CSL+  QR+YAF  CL  G+VCM LS++VF +P+
Sbjct: 1   MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60

Query: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120
           K A+LF FGN+LAVGST F+ GP QQI MMFDS RI AT +YL CVV+ALICAL IH+KI
Sbjct: 61  KFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKI 120

Query: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           LT++AII EICAL+WYSLSYIPFARRM+S+LMIR CDTEL
Sbjct: 121 LTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160

[Close]
BLAST of Cucsa.040660 vs. TrEMBL
Match: V7CXA0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G078100g PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.1e-57
Identity = 109/160 (68.12%), Postives = 128/160 (80.00%), Query Frame = 1 

Query: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60
           MW +      DEE+ +SLL EDS  LCSL+  QR+Y F  C   GV CM+LS++VF KP+
Sbjct: 1   MWNIRSLTGGDEEQGESLLGEDSGGLCSLSTTQRIYGFAACFVAGVACMLLSMIVFVKPM 60

Query: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120
           K AVLF FGN+LAVGST FL GP QQ+ MMFD VR+ ATAIYLGCVV+ALICALWIH+K+
Sbjct: 61  KFAVLFTFGNLLAVGSTGFLLGPAQQLGMMFDPVRVFATAIYLGCVVIALICALWIHSKV 120

Query: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           LT++A+I EI ALIWYSLSYIPFARRMVS+LMIR CDTEL
Sbjct: 121 LTIVAVIVEIGALIWYSLSYIPFARRMVSELMIRLCDTEL 160

[Close]
BLAST of Cucsa.040660 vs. TrEMBL
Match: V4U832_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006104mg PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57
Identity = 106/160 (66.25%), Postives = 132/160 (82.50%), Query Frame = 1 

Query: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60
           MWKL + V  DEER +S L+++S+ +CSL+  QR+YAF  CL  G+VCM LS++VF +P+
Sbjct: 1   MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60

Query: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120
           K A+LF FGN+LAVGST F+ GP QQI MMFDS RI AT +YL CV++ALICAL IH+KI
Sbjct: 61  KFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVLIALICALLIHSKI 120

Query: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           LT++AII EICAL+WYSLSYIPFARRM+S+LMIR CDTEL
Sbjct: 121 LTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160

[Close]
BLAST of Cucsa.040660 vs. TAIR10
Match: AT5G24170.1 (AT5G24170.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 204.1 bits (518), Expect = 6.3e-53
Identity = 97/146 (66.44%), Postives = 119/146 (81.51%), Query Frame = 1 

Query: 15  SQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAV 74
           + S L++ SE LC+L+  QR+Y F   L  G++ M LS++VF  P+K A+LF FGNVLA+
Sbjct: 18  TDSFLEDGSEGLCALSTTQRMYGFAASLATGLLLMFLSMIVFGIPIKFALLFTFGNVLAI 77

Query: 75  GSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVIAIISEICALI 134
           GST FL GP QQ+ MMFD VR LAT+IY+GCVV+ALICAL IH+KILTV+AI+ EICALI
Sbjct: 78  GSTAFLMGPEQQMSMMFDPVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEICALI 137

Query: 135 WYSLSYIPFARRMVSQLMIRFCDTEL 161
           WYSLSYIPFARRMVS++MIR CDTEL
Sbjct: 138 WYSLSYIPFARRMVSEIMIRLCDTEL 163

[Close]
BLAST of Cucsa.040660 vs. TAIR10
Match: AT5G23550.1 (AT5G23550.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 164.5 bits (415), Expect = 5.5e-41
Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 1 

Query: 11  DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGN 70
           DEE S S + ED    C+LT  QR Y F  CL+ G+ C +LS+LVF  P+K  + F  GN
Sbjct: 27  DEESSLSFM-EDLNRNCALTTKQRFYGFAICLSAGLTCTLLSMLVFFNPVKFGITFTLGN 86

Query: 71  VLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKILTVIAIISEI 130
           ++A+GST FL GP++Q+ MM D  RI ATA+YL  +++AL CAL++ NK+LT++AII E 
Sbjct: 87  LMALGSTAFLIGPQRQVTMMLDPARIYATALYLASIIIALFCALYVRNKLLTLLAIILEF 146

Query: 131 CALIWYSLSYIPFARRMVSQLMIRFCDTE 160
             LIWYSLSYIPFAR MVS++ +   DTE
Sbjct: 147 TGLIWYSLSYIPFARTMVSKIFMTCFDTE 174

[Close]
BLAST of Cucsa.040660 vs. NCBI nr
Match: gi|449455944|ref|XP_004145710.1| (PREDICTED: vesicle transport protein SFT2B [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-83
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1 

Query: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60
           MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL
Sbjct: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60

Query: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120
           KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI
Sbjct: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120

Query: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL
Sbjct: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 160

[Close]
BLAST of Cucsa.040660 vs. NCBI nr
Match: gi|659082018|ref|XP_008441622.1| (PREDICTED: vesicle transport protein SFT2B [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 1.6e-77
Identity = 150/161 (93.17%), Postives = 153/161 (95.03%), Query Frame = 1 

Query: 1   MWKLSEGVFVD-EERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKP 60
           MWKLS+GVFVD EERSQSLLDEDSEDLCSLT VQRLYAFGGCLTGGVVCMILSLLVFAKP
Sbjct: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILSLLVFAKP 60

Query: 61  LKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNK 120
           LK AVLF FGNVLAVGST FLFGP QQIRMMFDSVRI ATAIYLGCVVLALICALWIHNK
Sbjct: 61  LKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNK 120

Query: 121 ILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           ILTV A+ISEICALIWYSLSYIPFARRMVSQLM+RFCDTEL
Sbjct: 121 ILTVFAMISEICALIWYSLSYIPFARRMVSQLMVRFCDTEL 161

[Close]
BLAST of Cucsa.040660 vs. NCBI nr
Match: gi|702242983|ref|XP_010049189.1| (PREDICTED: vesicle transport protein SFT2B [Eucalyptus grandis])

HSP 1 Score: 236.9 bits (603), Expect = 2.5e-59
Identity = 115/161 (71.43%), Postives = 134/161 (83.23%), Query Frame = 1 

Query: 1   MWKLSEGVFVDEERSQS-LLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKP 60
           MWKLS+ +F  EE  Q  +L EDS+ +CSL+ +QR+YAFG CL  G+VCM LSL+VFAKP
Sbjct: 1   MWKLSQSLFGGEEEGQDEVLAEDSDGICSLSPMQRVYAFGACLLVGLVCMFLSLIVFAKP 60

Query: 61  LKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNK 120
           +K AV+F  GN+LAVGST FL G  QQ+RMMFDS R+ ATAIYLGCV LALICALWIH+K
Sbjct: 61  IKFAVVFTCGNLLAVGSTVFLIGAAQQMRMMFDSTRVFATAIYLGCVALALICALWIHSK 120

Query: 121 ILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           +LT+IAII EICALIWYSLSYIPFARRMVS LM+R CDTEL
Sbjct: 121 VLTIIAIIIEICALIWYSLSYIPFARRMVSDLMVRLCDTEL 161

[Close]
BLAST of Cucsa.040660 vs. NCBI nr
Match: gi|1009122809|ref|XP_015878202.1| (PREDICTED: vesicle transport protein SFT2B [Ziziphus jujuba])

HSP 1 Score: 235.7 bits (600), Expect = 5.5e-59
Identity = 116/162 (71.60%), Postives = 139/162 (85.80%), Query Frame = 1 

Query: 1   MW-KLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAK 60
           MW KL++ +  VD++  +S  D++S+ LCSL+A QR+Y F  CL+ G+V MILSL+VFAK
Sbjct: 1   MWQKLNQSLSGVDDDGRESFFDDESDGLCSLSATQRMYGFAACLSAGLVLMILSLIVFAK 60

Query: 61  PLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHN 120
           P+K A+LF FGNVLAVGST FL G  QQ+RMMFDSVRI ATAIYLGCVV+ALICALWIH+
Sbjct: 61  PIKFAILFTFGNVLAVGSTAFLLGLGQQMRMMFDSVRIYATAIYLGCVVIALICALWIHS 120

Query: 121 KILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           KILT++AIISEICAL WYSLSYIPFARRMVS+LMIR+CDTEL
Sbjct: 121 KILTIVAIISEICALFWYSLSYIPFARRMVSELMIRWCDTEL 162

[Close]
BLAST of Cucsa.040660 vs. NCBI nr
Match: gi|645258117|ref|XP_008234734.1| (PREDICTED: vesicle transport protein SFT2B [Prunus mume])

HSP 1 Score: 232.6 bits (592), Expect = 4.7e-58
Identity = 114/162 (70.37%), Postives = 135/162 (83.33%), Query Frame = 1 

Query: 1   MW-KLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAK 60
           MW KL++ +   +EE  +  LDE+S+  C+L+A QR+Y F  CL  G+VCM LSL+VFAK
Sbjct: 1   MWAKLNQSMLEGNEEGGEGFLDEESDGFCALSATQRMYGFAACLLAGLVCMFLSLIVFAK 60

Query: 61  PLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHN 120
           P+K AVLF FGN+LAVGST FLFGP QQ+RMMFDSVR+ ATAIYLGCVV+ALICALWIH+
Sbjct: 61  PIKFAVLFTFGNLLAVGSTAFLFGPGQQMRMMFDSVRVYATAIYLGCVVIALICALWIHS 120

Query: 121 KILTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 161
           KILT+IAII E+CALIWYSLSYIPFARR+VS LMIR  DTEL
Sbjct: 121 KILTIIAIICEVCALIWYSLSYIPFARRIVSNLMIRLFDTEL 162

The following BLAST results are available for this feature:
BLAST of Cucsa.040660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SFT2B_HUMAN3.5e-2139.04Vesicle transport protein SFT2B OS=Homo sapiens GN=SFT2D2 PE=1 SV=1[more]
SFT2B_MOUSE1.9e-1937.67Vesicle transport protein SFT2B OS=Mus musculus GN=Sft2d2 PE=1 SV=1[more]
SFT2A_HUMAN2.1e-1843.31Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1[more]
SFT2A_RAT1.4e-1742.52Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1[more]
SFT2A_MOUSE3.1e-1741.73Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=1 SV=1[more]
BLAST of Cucsa.040660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC39_CUCSA1.0e-83100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603050 PE=4 SV=1[more]
A0A059DEZ9_EUCGR1.7e-5971.43Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01469 PE=4 SV=1[more]
A0A067E770_CITSI1.6e-5766.88Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031391mg PE=4 SV=1[more]
V7CXA0_PHAVU2.1e-5768.13Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G078100g PE=4 SV=1[more]
V4U832_9ROSI3.6e-5766.25Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006104mg PE=4 SV=1[more]
BLAST of Cucsa.040660 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24170.16.3e-5366.44 Got1/Sft2-like vescicle transport protein family[more]
AT5G23550.15.5e-4153.02 Got1/Sft2-like vescicle transport protein family[more]
BLAST of Cucsa.040660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449455944|ref|XP_004145710.1|1.4e-83100.00PREDICTED: vesicle transport protein SFT2B [Cucumis sativus][more]
gi|659082018|ref|XP_008441622.1|1.6e-7793.17PREDICTED: vesicle transport protein SFT2B [Cucumis melo][more]
gi|702242983|ref|XP_010049189.1|2.5e-5971.43PREDICTED: vesicle transport protein SFT2B [Eucalyptus grandis][more]
gi|1009122809|ref|XP_015878202.1|5.5e-5971.60PREDICTED: vesicle transport protein SFT2B [Ziziphus jujuba][more]
gi|645258117|ref|XP_008234734.1|4.7e-5870.37PREDICTED: vesicle transport protein SFT2B [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR011691Vesicle_transpt_SFT2
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.040660.1Cucsa.040660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 45..151
score: 1.6
IPR011691Vesicle transport protein, SFT2-likePANTHERPTHR23137UNCHARACTERIZEDcoord: 12..160
score: 4.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.040660Cla004246Watermelon (97103) v1cgywmB015
Cucsa.040660Csa3G603050Cucumber (Chinese Long) v2cgycuB013
Cucsa.040660ClCG05G008850Watermelon (Charleston Gray)cgywcgB015
Cucsa.040660CSPI03G26450Wild cucumber (PI 183967)cgycpiB014
Cucsa.040660CmaCh16G000570Cucurbita maxima (Rimu)cgycmaB0027
Cucsa.040660Lsi05G000920Bottle gourd (USVL1VR-Ls)cgylsiB013
Cucsa.040660MELO3C008483.2Melon (DHL92) v3.6.1cgymedB015
Cucsa.040660CsaV3_3G027890Cucumber (Chinese Long) v3cgycucB016
Cucsa.040660Cla97C05G091130Watermelon (97103) v2cgywmbB015
Cucsa.040660Bhi01G001103Wax gourdcgywgoB015
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None