Cucsa.036070 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.036070
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 1
Location	scaffold00464 : 12870 .. 15018 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGACAGACGAACTTTTTCCATTCTATGTCACTTACTAAGGACGATTGTTGGTCTGATGTCGACCGAAATCGTCGATGTCAAGGAGATGGTCGCCATGTTTCTGCATGTATTGGCACATGATGTCAAGAATAGAATCATCCAACGGGATTTCGTGCGATCAGGAGAGACTGTTTTCCGTCACTTTAACCTCGTACTACTGGCGGTGTTGCGATTGCACGATGAGTTGTTGAAGAAACCCCAGCCAGTGACTAACACACGCACTGATTCAAGATGGAGTTGCTTCGAGGTCCGCATATTACTATATCCCGTTACTTATCAATCACCACGTCCAGTGACTAACTGGGTGGTATTTCATTCTGCAGAACTACCTTGGGGCATTGGATGACACGTACATCAAGGTGAACGTGCCGCAAACCGATAGGCTTAGGTATAGAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTGATATGAAAGGCGACTTCATCTTCGTATTGGCTGGTTGGAAAGGATCTGCAGCAGATTCACGCATTCTTCGAGATGCTATTGCACAACCAAATGGACTGCATGTTCCTCAAGATAATCAAATGTTTTATGCCTCGAACATATACTTCCTACAACGTCAAGCAAATTAGTTCAATCTGACGCATTCATAACAGGTCATTACTATCTATGCGACGCCAGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGATACCACTTGCAAGAGTGGCGAGGAGCGGGAAATGCCCCTGCCACCGCGAAAGAGTACTTCAACATGAAACATTCTACCGCTAGGAATGTTATTGAACGAGCGTTCGAGTTGTTGAAGGGTCGATGGACAATCCTTCCTGGCAAGTCGTACTATCCCGTGCAAATTCAATGTCGAACAATTCTAGCGTGTTGCCCACTACACAATCTCATCAACCACGAGATGACGAATGTCAATTTCGTTGATGAAGGAGACTCCACCTACGCCACGATTGGAGGTGATGACATTCAGTTCGTTGAGAACTCAAATGAATGGACGCAGTGGAGGGATGATTTGGCCGCAGAGATGTTCAATGAATGGCAGTTTCGTAACGAATAGGCTTTCGTGTCGATTTCGTATTCCTGTACTTGTATTTAGTTAGTATTGGGTGTGTCTTCCTGTACGCTTGAATGTATGCATGCAGTATGAAAAACGAATTTGAGAATTTTGCCTTCTTGTGTATTTTAATAATTATTCCTTCTTGTTTATTGAAGGTACTTAAACAAATGCATGGTTGTATGATTGTCAGTATGGCAAGTTCATCACGTGCTTCTAAGTATGTATGGATGAAGGAGGAGGAGGCAACCCTCGTCGCGTGTATGGTCGAGTTGGTGTCTGCTGATGGATCGAAGTCAGACAATGGCACAACTTCTACGAATGATGGCCGCGAAGTTGCCGGGATGCAATGTACATGCGACCACAGTGATCGACTGTCGCATAAAGACGTTGAAGCGCTCATAACAGGCAATCACAGAAATGCGCGGCCCGTCATGCAGTGGGTTTGGTTGGAATGACGATGCGAAGTGCATCGTTGCTGAGAACGAGTTATTTGACAACTGGGTCATGGTATGTGAAAAGTCTAATATTTGATTTTTCTTTCCTATGCAGAGTCATCCTACAGCGAAGGGGCTGCTAAATAACCCTTTCCCATATTACGACGAGTTGGCGTATGTATTCGGGAAAGATCGTGCAACGGGCGCCCATGTAGAGACCTTTGCCGATGTCGGATCCAACGTTCCTCCTGGGTTTGAGGAATTTCCTCACGTGGATCTCAATGATATGGAAATTCCTTCCATGTCCAGCCATAGGTTTAACATGTCACAAGACGACATCGCACGACCAGGTCGAGGAACCGATAATAGGACGACTTCAAGCGGCTCGAAGCGTAGGCGGGGAGGGCAGACTTCGAAAACAGCTGATGTCATTAAGGATGTCATGGCTCTTCAAACTGACCAAATGAGACTCATTGTAGAGTGGTCGCGCGATTGGCACTGGAGGATGAAAGCAGGGTCCGTAGAGAGGTGGTTCGCGCATTGCGTGTCATACATCAGCTCAGTATGTTGGACATGGCACAATGTAATCAAATACTAA

mRNA sequence

aatggacagacgaactttttccattctatgtcacttactaaggacgattgttggtctgatgtcgaccgaaatcgtcgatgtcaaggagatggtcgccatgtttctgcatgtattggcacatgatgtcaagaatagaatcatccaacgggatttcgtgcgatcaggagagactgttttccgtcactttaacctcgtactactggcggtgttgcgattgcacgatgagttgttgaagaaaccccagccagtgactaacacacgcactgattcaagatggagttgcttcgagaactaccttggggcattggatgacacgtacatcaaggtgaacgtgccgcaaaccgataggcttaggtatagaacacgtaagggagaagttgccacaaacgtcctcggtgtgtgtgatatgaaaggcgacttcatcttcgtattggctggttggaaaggatctgcagcagattcacgcattcttcgagatgctattgcacaaccaaatggactgcatgttcctcaagataatcaaatcaaattagttcaatctgacgcattcataacaggtcattactatctatgcgacgccagatatcccaatgcagagggatttctagctccctatagaggacaaagataccacttgcaagagtggcgaggagcgggaaatgcccctgccaccgcgaaagagtacttcaacatgaaacattctaccgctaggaatgttattgaacgagcgttcgatgggtttggttggaatgacgatgcgaagtgcatcgttgctgagaacgagttatttgacaactgggtcatgagtcatcctacagcgaaggggctgctaaataaccctttcccatattacgacgagttggcgtatgtattcgggaaagatcgtgcaacgggcgcccatgtagagacctttgccgatgtcggatccaacgttcctcctgggtttgaggaatttcctcacgtggatctcaatgatatggaaattccttccatgtccagccataggtttaacatgtcacaagacgacatcgcacgaccaggtcgaggaaccgataataggacgacttcaagcggctcgaagcgtaggcggggagggcagacttcgaaaacagctgatgtcattaaggatgtcatggctcttcaaactgaccaaatgagactcattgtagagtggtcgcgcgattggcactggaggatgaaagcagggtccgtagagaggtggttcgcgcattgcgtgtcatacatcagctcagtatgttggacatggcacaatgtaatcaaatactaa

Coding sequence (CDS)

AATGGACAGACGAACTTTTTCCATTCTATGTCACTTACTAAGGACGATTGTTGGTCTGATGTCGACCGAAATCGTCGATGTCAAGGAGATGGTCGCCATGTTTCTGCATGTATTGGCACATGATGTCAAGAATAGAATCATCCAACGGGATTTCGTGCGATCAGGAGAGACTGTTTTCCGTCACTTTAACCTCGTACTACTGGCGGTGTTGCGATTGCACGATGAGTTGTTGAAGAAACCCCAGCCAGTGACTAACACACGCACTGATTCAAGATGGAGTTGCTTCGAGAACTACCTTGGGGCATTGGATGACACGTACATCAAGGTGAACGTGCCGCAAACCGATAGGCTTAGGTATAGAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTGATATGAAAGGCGACTTCATCTTCGTATTGGCTGGTTGGAAAGGATCTGCAGCAGATTCACGCATTCTTCGAGATGCTATTGCACAACCAAATGGACTGCATGTTCCTCAAGATAATCAAATCAAATTAGTTCAATCTGACGCATTCATAACAGGTCATTACTATCTATGCGACGCCAGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGATACCACTTGCAAGAGTGGCGAGGAGCGGGAAATGCCCCTGCCACCGCGAAAGAGTACTTCAACATGAAACATTCTACCGCTAGGAATGTTATTGAACGAGCGTTCGATGGGTTTGGTTGGAATGACGATGCGAAGTGCATCGTTGCTGAGAACGAGTTATTTGACAACTGGGTCATGAGTCATCCTACAGCGAAGGGGCTGCTAAATAACCCTTTCCCATATTACGACGAGTTGGCGTATGTATTCGGGAAAGATCGTGCAACGGGCGCCCATGTAGAGACCTTTGCCGATGTCGGATCCAACGTTCCTCCTGGGTTTGAGGAATTTCCTCACGTGGATCTCAATGATATGGAAATTCCTTCCATGTCCAGCCATAGGTTTAACATGTCACAAGACGACATCGCACGACCAGGTCGAGGAACCGATAATAGGACGACTTCAAGCGGCTCGAAGCGTAGGCGGGGAGGGCAGACTTCGAAAACAGCTGATGTCATTAAGGATGTCATGGCTCTTCAAACTGACCAAATGAGACTCATTGTAGAGTGGTCGCGCGATTGGCACTGGAGGATGAAAGCAGGGTCCGTAGAGAGGTGGTTCGCGCATTGCGTGTCATACATCAGCTCAGTATGTTGGACATGGCACAATGTAATCAAATACTAA

Protein sequence

MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQSDAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFDGFGWNDDAKCIVAENELFDNWVMSHPTAKGLLNNPFPYYDELAYVFGKDRATGAHVETFADVGSNVPPGFEEFPHVDLNDMEIPSMSSHRFNMSQDDIARPGRGTDNRTTSSGSKRRRGGQTSKTADVIKDVMALQTDQMRLIVEWSRDWHWRMKAGSVERWFAHCVSYISSVCWTWHNVIKY*

Homology

[Close]

BLAST of Cucsa.036070 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 4.0e-103
Identity = 186/244 (76.23%), Postives = 208/244 (85.25%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           MDRRTF+ILCHLLR + GL STEIVDV+EMVAMFLHVLAHDVKNR+IQ++FVRSGETV R
Sbjct: 15  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFVRSGETVSR 74

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYR 120
           HFN+VLLAVLRL++EL+K+P PVT+   D RW CFEN LGALD TYIKVNVP  DR  +R
Sbjct: 75  HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 134

Query: 121 TRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQS 180
           TRKGE+ATNVLGVCDMKGDF++VLAGW+GSAADSRILRDAI+Q NGL VP+         
Sbjct: 135 TRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPK--------- 194

Query: 181 DAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVI 240
                G+YYLCDA YPNAEGFLAPY+GQRYHLQEWRGA NAP  AKEYFNMKHS+ARNVI
Sbjct: 195 -----GYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 244

Query: 241 ERAF 245
           ERAF
Sbjct: 255 ERAF 244

[Close]

BLAST of Cucsa.036070 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.2e-37
Identity = 84/152 (55.26%), Postives = 103/152 (67.76%), Query Frame = 1


Query: 243 AFDGFGWNDDAKCIVAENELFDNWVMSHPTAKGLLNNPFPYYDELAYVFGKDRATGAHVE 302
           A  GFGWND+ KCIVAE ELFDNWV S P AKGLLNNPFPYYDEL YVFG+DRATG   E
Sbjct: 405 ACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAE 464

Query: 303 TFADVGSNVP-PGFEEFPHVDLNDMEIPSMSSHRFNMSQDDI--ARPGRGTDNRTTSSGS 362
           TFADVGSN P  G++ F   D N+ + P + S   ++ QDD+  +RP R ++ +T SSGS
Sbjct: 465 TFADVGSNEPGGGYDRFDMGDGNE-DFPPVYSRGVDILQDDVRASRPSRASEGKTGSSGS 524

Query: 363 KRRRGGQTSKTADVIKDVMALQTDQMRLIVEW 392
           KR+RG Q     + I   +    +Q+R I EW
Sbjct: 525 KRKRGSQRDFDVEAIHLALDQTNEQLRQIAEW 555

HSP 2 Score: 348.2 bits (892), Expect = 1.4e-92
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1


Query: 15  TIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFRHFNLVLLAVLRLHD 74
           TI GL STE+VDV+EMVAMFLH+LAHDVK+R+I+R+F+RSGET+ RHFN+VLLAV+RLH+
Sbjct: 57  TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHE 116

Query: 75  ELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC 134
           ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Sbjct: 117 ELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVC 176

Query: 135 DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQSDAFITGHYYLCDAR 194
           D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+              G+YYL D  
Sbjct: 177 DTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPK--------------GYYYLVDVG 236

Query: 195 YPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAF 245
           YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKH +ARNVIERAF
Sbjct: 237 YPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAF 272

[Close]

BLAST of Cucsa.036070 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.0e-34
Identity = 75/148 (50.68%), Postives = 98/148 (66.22%), Query Frame = 1


Query: 246 GFGWNDDAKCIVAENELFDNWVMSHPTAKGLLNNPFPYYDELAYVFGKDRATGAHVETFA 305
           GFGWND+ KCIVAE E+FD+W  SHP AKGLLN  F +YDEL+YVFGKDRATG   E+FA
Sbjct: 445 GFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 504

Query: 306 DVGSNVPPGFEEFPHVDLNDMEIPSMSSHRFNMSQDDI--ARPGRGTDNRTTSSGSKRRR 365
           D+GSN PPG++      + D + P M S   NMS DD+   R  R ++ R  SSGSKR+R
Sbjct: 505 DIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKR 564

Query: 366 GGQTSKTADVIKDVMALQTDQMRLIVEW 392
            G  + + D+++  +    +Q+  I EW
Sbjct: 565 PGHATDSGDIVRTAIEYGNEQLHRIAEW 590

HSP 2 Score: 293.5 bits (750), Expect = 4.2e-76
Identity = 146/244 (59.84%), Postives = 178/244 (72.95%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           MDR TF+ LC +LRTI  L  ++ +DV+EMVA+FLH+LAH VKNR+I+  F+RSGET+ R
Sbjct: 74  MDRHTFTTLCSMLRTIGKLKDSKYIDVEEMVALFLHILAHHVKNRVIKFRFLRSGETISR 133

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYR 120
           HFN VL AV+RL   LLKKP+PV+   TD RW  F+N LGALD TYIKVNV + D+ RYR
Sbjct: 134 HFNAVLNAVIRLQGVLLKKPEPVSENSTDERWKWFKNCLGALDGTYIKVNVREGDKPRYR 193

Query: 121 TRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQS 180
           TRK E+ATNVLGVC     FI+VL GW+GS +DSR+LRDA+++ NGL VP          
Sbjct: 194 TRKNEIATNVLGVCSQDMQFIYVLPGWEGSTSDSRVLRDAVSRRNGLTVPH--------- 253

Query: 181 DAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVI 240
                G+YYL D  Y N +GFLAPYRGQRYHL +WR  G+ P T +E+FNMKHS ARNVI
Sbjct: 254 -----GYYYLVDVGYTNGKGFLAPYRGQRYHLNDWR-EGHMPTTHEEFFNMKHSAARNVI 302

Query: 241 ERAF 245
           ER F
Sbjct: 314 ERCF 302

[Close]

BLAST of Cucsa.036070 vs. TrEMBL
Match: A5BND9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.5e-01
Identity = 30/101 (29.70%), Postives = 47/101 (46.53%), Query Frame = 1


Query: 270 HPTAKGLLNNPFPYYDELAYVFGKDRATGAHVETFADVGSNVPPGFEEFPHVDLNDMEIP 329
           H  A GL   PFP++D+L+ VFGKDRA G    + AD+   +    E    + ++D+E  
Sbjct: 408 HKDANGLRLKPFPHFDDLSLVFGKDRANGKGAMSAADILEELDQ-VEASNGIGVDDLEAE 467

Query: 330 SMSSHRFNMSQDDIARPGRGTDNRTTSSGSKRRRGGQTSKT 371
             +SH   ++          T +R   S   RR+  +   T
Sbjct: 468 VDASHTNTVA---------STPSRMECSSQSRRKRARNDGT 498

HSP 2 Score: 272.3 bits (695), Expect = 9.9e-70
Identity = 136/244 (55.74%), Postives = 172/244 (70.49%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           M+R TF  LC +L +I GL ST+ + V E VA+FLH++AH VKNR+I  +F RSGE++ R
Sbjct: 81  MNRVTFLKLCEMLESIGGLKSTKNMLVDEQVAIFLHIIAHHVKNRVISLNFRRSGESISR 140

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYR 120
           HF+ VL AVL+L + L +KP+P+    TD++W  F+N LGALD TYI+V VP  D+ RYR
Sbjct: 141 HFHNVLAAVLKLQEHLFRKPEPIPTNSTDNQWKWFKNCLGALDGTYIRVKVPSADKPRYR 200

Query: 121 TRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQS 180
           TRKG +ATN+LGVC     F+FVL GW+GS AD R+LRDA+ + NGL VP          
Sbjct: 201 TRKGNIATNMLGVCTPDMQFVFVLPGWEGSVADGRVLRDALRRRNGLKVP---------- 260

Query: 181 DAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVI 240
                G YYL DA Y N EGFLAPYRGQRYHL EWR  G+ P++ +E+FNMKH+ ARNVI
Sbjct: 261 ----NGCYYLVDAGYTNCEGFLAPYRGQRYHLNEWR-QGHDPSSHEEFFNMKHAAARNVI 309

Query: 241 ERAF 245
           ER F
Sbjct: 321 ERCF 309

[Close]

BLAST of Cucsa.036070 vs. TrEMBL
Match: A0A061FY73_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014176 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 37/127 (29.13%), Postives = 63/127 (49.61%), Query Frame = 1


Query: 246 GFGWNDDAKCIVAENELFDNWVMSHPTAKGLLNNPFPYYDELAYVFGKDRATGAHVETFA 305
           GFGW+D    +VA++ +++ ++ SH  A       FP+++EL+ ++ +DRA G   +T A
Sbjct: 494 GFGWDDQRNMVVADDPVWEAYIQSHKEAAPFRRKSFPFFNELSIIYARDRAIGKDAQTAA 553

Query: 306 DVGSNVPPGFEEFPHVDLNDM---EIPSMSSHRFNMSQDDIA--RPGRGTDNRTTSSGSK 365
           D+        EE    D ND    EI   +   +N   +D +  +P        T+S  K
Sbjct: 554 DI-------LEEMQ--DCNDTINEEIEGENLAGYNFEDEDFSNIQPQTSAPRSDTTSTRK 611

Query: 366 RRRGGQT 368
           R+R  +T
Sbjct: 614 RKRLNET 611

HSP 2 Score: 254.6 bits (649), Expect = 2.1e-64
Identity = 133/276 (48.19%), Postives = 171/276 (61.96%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           M+R TF  LC +L +I GL ST+ + V E VA+FLH++AH VKNR+I  +F +SGE++ R
Sbjct: 81  MNRVTFFKLCEMLESIGGLKSTKNMLVDEQVAIFLHIIAHHVKNRVISLNFRKSGESISR 140

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYR 120
           HF+ VL AVL+L + L +KP+P+    TD+RW  F+N LGALD TYI+V VP  D+ RYR
Sbjct: 141 HFHNVLAAVLKLQEYLFRKPEPIPTNSTDNRWKWFKNCLGALDGTYIRVKVPSADKPRYR 200

Query: 121 TRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQS 180
           TRKG++ATN+LGVC +   F+FVL GW+GS AD R+LRDA+ + NGL VP          
Sbjct: 201 TRKGDIATNMLGVCTLDMQFVFVLPGWEGSVADGRVLRDALRRRNGLKVPN--------- 260

Query: 181 DAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAP------------------ 240
                G YYL DA Y N EGFLAP+RGQRYHL EWR                        
Sbjct: 261 -----GCYYLVDAGYSNCEGFLAPFRGQRYHLNEWRQGHEXXXXXXXXXXXXXXXXXXXX 320

Query: 241 --------------ATAKEYFNMKHSTARNVIERAF 245
                         ++ +E+FNMKH+ ARNVIER F
Sbjct: 321 XXXXXXXXXXXXXXSSPEEFFNMKHAAARNVIERCF 342

[Close]

BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G41980.1 (AT5G41980.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-31
Identity = 84/245 (34.29%), Postives = 127/245 (51.84%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           MD+  F  LC LL+T   L  T  + ++  +A+FL ++ H+++ R +Q  F  SGET+ R
Sbjct: 48  MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISR 107

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRT-DSRWSCFENYLGALDDTYIKVNVPQTDRLRY 120
           HFN VL AV+ +  +     QP +N+ T ++    F++ +G +D  +I V V   ++  +
Sbjct: 108 HFNNVLNAVIAISKDFF---QPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQGPF 167

Query: 121 RTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQ 180
           R   G +  NVL        F +VLAGW+GSA+D ++L  A+ + N L VPQ        
Sbjct: 168 RNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQ-------- 227

Query: 181 SDAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNV 240
                 G YY+ D +YPN  GF+APY G          + N+   AKE FN +H      
Sbjct: 228 ------GKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHRA 266

Query: 241 IERAF 245
           I R F
Sbjct: 288 IHRTF 266

[Close]

BLAST of Cucsa.036070 vs. TAIR10
Match: AT1G43722.1 (AT1G43722.1 unknown protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-27
Identity = 83/251 (33.07%), Postives = 125/251 (49.80%), Query Frame = 1


Query: 6   FSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFRHFNLV 65
           F+ LC++L+T   L  T  + ++E VAMFL +  H+   R +   F R+ ETV R F  V
Sbjct: 77  FTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREV 136

Query: 66  LLAVLRLHDELLKKPQPVTNTRTDSR-------WSCFENYLGALDDTYIKVNVPQTDRLR 125
           L A   L  + ++ P      R   R       W  F  ++GA+D T++ V V    +  
Sbjct: 137 LTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGM 196

Query: 126 YRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLV 185
           Y  R    + N++ +CD+K  F ++  G  GS  D+ +L+  IAQ +      D++  L 
Sbjct: 197 YWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVLQ--IAQQS------DSEFPLP 256

Query: 186 QSDAFITGHYYLCDARYPNAEGFLAPYRGQ-----RYHLQEWRGAGNAPATAKEYFNMKH 245
            S+      YYL D+ YPN +G LAPYR       RYH+ ++   G  P    E FN  H
Sbjct: 257 PSE-----KYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFY-YGPRPRNKHELFNQCH 313

[Close]

BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G35695.1 (AT5G35695.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-16
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 1


Query: 140 FIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQSDAFITGHYYLCDARYPNAE 199
           FI+VL+GW+GSA DSR+L DA+ +                        +YL D  + N  
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK------------------------FYLVDCGFANRL 84

Query: 200 GFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFDGF 248
            FLAP+RG RYHLQE+ G    P T  E FN++H + RNVIER F  F
Sbjct: 85  NFLAPFRGVRYHLQEFAGQRRDPETPHELFNLRHVSLRNVIERIFGIF 108

[Close]

BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G28730.1 (AT5G28730.1 unknown protein)

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-16
Identity = 66/215 (30.70%), Postives = 96/215 (44.65%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           M    F+ LC +L    GL S+  + + E VA+FL + A +   R I   F  + ET++R
Sbjct: 30  MSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQETIWR 89

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRT-DSRWSCFENYLGALDDTYIKVNVPQTDRLRY 120
            F+ VL A+ RL  E + +P+ V   R   +R      Y   L D               
Sbjct: 90  KFHDVLKAMERLAVEYI-RPRKVEELRAISNRLQDDTRYWPFLMDLL------------- 149

Query: 121 RTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQ 180
               G  + NVL +CD+   F +   G  GS  D+R+L  AI+     HVP D++     
Sbjct: 150 ----GIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSK----- 209

Query: 181 SDAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQE 215
                   YYL D+ Y N  G+LAPYR +    Q+
Sbjct: 210 --------YYLVDSGYANKRGYLAPYRREHREAQD 213

[Close]

BLAST of Cucsa.036070 vs. TAIR10
Match: AT5G28950.1 (AT5G28950.1 unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-13
Identity = 33/81 (40.74%), Postives = 57/81 (70.37%), Query Frame = 1


Query: 95  FENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADS 154
           F++ +GA+DDT+I   V Q     +R RKG+++ N+L  C+   +F++VL+GW+GSA DS
Sbjct: 22  FKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDS 81

Query: 155 RILRDAIAQ-PNGLHVPQDNQ 175
           ++L DA+ +  N L VP++++
Sbjct: 82  KVLNDALTRNSNRLPVPEEDE 102

[Close]

BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 383.3 bits (983), Expect = 5.7e-103
Identity = 186/244 (76.23%), Postives = 208/244 (85.25%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           MDRRTF+ILCHLLR + GL STEIVDV+EMVAMFLHVLAHDVKNR+IQ++FVRSGETV R
Sbjct: 15  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFVRSGETVSR 74

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYR 120
           HFN+VLLAVLRL++EL+K+P PVT+   D RW CFEN LGALD TYIKVNVP  DR  +R
Sbjct: 75  HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 134

Query: 121 TRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQS 180
           TRKGE+ATNVLGVCDMKGDF++VLAGW+GSAADSRILRDAI+Q NGL VP+         
Sbjct: 135 TRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPK--------- 194

Query: 181 DAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVI 240
                G+YYLCDA YPNAEGFLAPY+GQRYHLQEWRGA NAP  AKEYFNMKHS+ARNVI
Sbjct: 195 -----GYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 244

Query: 241 ERAF 245
           ERAF
Sbjct: 255 ERAF 244

[Close]

BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 164.9 bits (416), Expect = 3.2e-37
Identity = 84/152 (55.26%), Postives = 103/152 (67.76%), Query Frame = 1


Query: 243 AFDGFGWNDDAKCIVAENELFDNWVMSHPTAKGLLNNPFPYYDELAYVFGKDRATGAHVE 302
           A  GFGWND+ KCIVAE ELFDNWV S P AKGLLNNPFPYYDEL YVFG+DRATG   E
Sbjct: 405 ACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAE 464

Query: 303 TFADVGSNVP-PGFEEFPHVDLNDMEIPSMSSHRFNMSQDDI--ARPGRGTDNRTTSSGS 362
           TFADVGSN P  G++ F   D N+ + P + S   ++ QDD+  +RP R ++ +T SSGS
Sbjct: 465 TFADVGSNEPGGGYDRFDMGDGNE-DFPPVYSRGVDILQDDVRASRPSRASEGKTGSSGS 524

Query: 363 KRRRGGQTSKTADVIKDVMALQTDQMRLIVEW 392
           KR+RG Q     + I   +    +Q+R I EW
Sbjct: 525 KRKRGSQRDFDVEAIHLALDQTNEQLRQIAEW 555

HSP 2 Score: 375.9 bits (964), Expect = 9.1e-101
Identity = 184/244 (75.41%), Postives = 204/244 (83.61%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           MDRR F+ILCHLLRT  GL+ TE++DV+EMVAMFLH+LAHDVKNR+IQR+FVRSGETV R
Sbjct: 1   MDRRCFAILCHLLRTTAGLVETEVIDVEEMVAMFLHILAHDVKNRMIQREFVRSGETVSR 60

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYR 120
           HFN+VLLA  RLHDELLKKPQPVTN+ TD RW  FEN LGALD TYIKVNV  TDR RYR
Sbjct: 61  HFNIVLLAGFRLHDELLKKPQPVTNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRYR 120

Query: 121 TRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQS 180
           TRKGEVATNVLG CD KGDF+FVL GW+GSAADSRILRDAI++ NGL VP+         
Sbjct: 121 TRKGEVATNVLGACDTKGDFVFVLFGWEGSAADSRILRDAISRHNGLKVPK--------- 180

Query: 181 DAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVI 240
                G+YYLCDA YPNAEGFLAPYRG+RYHL EWRG  NAP TA+E+FNMKHS+ARNVI
Sbjct: 181 -----GYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGESNAPTTAREFFNMKHSSARNVI 230

Query: 241 ERAF 245
           ERAF
Sbjct: 241 ERAF 230

[Close]

BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|659118458|ref|XP_008459130.1| (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 374.8 bits (961), Expect = 2.0e-100
Identity = 183/244 (75.00%), Postives = 207/244 (84.84%), Query Frame = 1


Query: 1   MDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFR 60
           MDRR F+ILCHLLRTI GL STE+VDV+EMVAMFL++LAHDVKNR+IQR+F+R GET+ R
Sbjct: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLNILAHDVKNRVIQREFMRLGETISR 60

Query: 61  HFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYR 120
           HFN+VLLAV+RLH ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYR
Sbjct: 61  HFNMVLLAVIRLHQELLKKPQPVPNDCTDQRWRWFENCLGALDGTYIKVNVPVSDRARYR 120

Query: 121 TRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQS 180
           TRKGEVATNVLGVCD KGDFI+VLAGW+GSAADSRILRDA+++PNGL VP+         
Sbjct: 121 TRKGEVATNVLGVCDTKGDFIYVLAGWEGSAADSRILRDALSRPNGLKVPK--------- 180

Query: 181 DAFITGHYYLCDARYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVI 240
                G+YYL D  YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+K++FNMKHS+ARNVI
Sbjct: 181 -----GYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKKFFNMKHSSARNVI 230

Query: 241 ERAF 245
           ERAF
Sbjct: 241 ERAF 230

[Close]

BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1


Query: 15  TIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFRHFNLVLLAVLRLHD 74
           TI GL STE+VDV+EMVAMFLH+LAHDVK+R+I+R+F+RSGET+ RHFN+VLLAV+RLH+
Sbjct: 57  TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHE 116

Query: 75  ELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC 134
           ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Sbjct: 117 ELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVC 176

Query: 135 DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQSDAFITGHYYLCDAR 194
           D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+              G+YYL D  
Sbjct: 177 DTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPK--------------GYYYLVDVG 236

Query: 195 YPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAF 245
           YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKH +ARNVIERAF
Sbjct: 237 YPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAF 272

[Close]

BLAST of Cucsa.036070 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34
Identity = 75/148 (50.68%), Postives = 98/148 (66.22%), Query Frame = 1


Query: 246 GFGWNDDAKCIVAENELFDNWVMSHPTAKGLLNNPFPYYDELAYVFGKDRATGAHVETFA 305
           GFGWND+ KCIVAE E+FD+W  SHP AKGLLN  F +YDEL+YVFGKDRATG   E+FA
Sbjct: 445 GFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 504

Query: 306 DVGSNVPPGFEEFPHVDLNDMEIPSMSSHRFNMSQDDI--ARPGRGTDNRTTSSGSKRRR 365
           D+GSN PPG++      + D + P M S   NMS DD+   R  R ++ R  SSGSKR+R
Sbjct: 505 DIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKR 564

Query: 366 GGQTSKTADVIKDVMALQTDQMRLIVEW 392
            G  + + D+++  +    +Q+  I EW
Sbjct: 565 PGHATDSGDIVRTAIEYGNEQLHRIAEW 590

HSP 2 Score: 337.8 bits (865), Expect = 2.8e-89
Identity = 165/226 (73.01%), Postives = 190/226 (84.07%), Query Frame = 1


Query: 20  MSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVFRHFNLVLLAVLRLHDELLKK 79
           M TE+VDV+EMVAMFLH+LAHDVKNR+IQR+F+RSGET+ RHFN+VLLAV+RLH+ELLKK
Sbjct: 1   MLTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETMSRHFNMVLLAVIRLHEELLKK 60

Query: 80  PQPVTNTRTDSRWS-CFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKG 139
           PQPV N  TD +WS   +N LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVCD KG
Sbjct: 61  PQPVPNEYTDKKWSYVLQNCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKG 120

Query: 140 DFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIKLVQSDAFITGHYYLCDARYPNA 199
           DF++VL GW+GSAADSRILRDA+++PN L VP+              G+YYL D  YPNA
Sbjct: 121 DFVYVLVGWEGSAADSRILRDALSRPNELKVPK--------------GYYYLVDVGYPNA 180

Query: 200 EGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAF 245
           EGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKHS+ARNVIERAF
Sbjct: 181 EGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAF 212

The following BLAST results are available for this feature:

BLAST of Cucsa.036070 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBB2_CUCME	4.0e-103	76.23	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GBB2_CUCME	2.2e-37	55.26	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GCB5_CUCME	1.0e-34	50.68	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A5BND9_VITVI	1.5e-01	29.70	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1	[more]
A0A061FY73_THECC	1.6e-06	29.13	Uncharacterized protein OS=Theobroma cacao GN=TCM_014176 PE=4 SV=1	[more]

BLAST of Cucsa.036070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41980.1	1.3e-31	34.29	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT1G43722.1	1.9e-27	33.07	unknown protein	[more]
AT5G35695.1	1.1e-16	42.59	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT5G28730.1	2.5e-16	30.70	unknown protein	[more]
AT5G28950.1	4.5e-13	40.74	unknown protein	[more]

BLAST of Cucsa.036070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|307135889\|gb\|ADN33754.1\|	5.7e-103	76.23	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|307135889\|gb\|ADN33754.1\|	3.2e-37	55.26	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|659118458\|ref\|XP_008459130.1\|	2.0e-100	75.00	PREDICTED: putative nuclease HARBI1 [Cucumis melo]	[more]
gi\|307136287\|gb\|ADN34114.1\|	2.0e-92	73.48	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|307136287\|gb\|ADN34114.1\|	1.5e-34	50.68	retrotransposon protein [Cucumis melo subsp. melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027806	HARBI1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.036070.1	Cucsa.036070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 103..244 score: 6.2
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 1..245 score: 1.5
None	No IPR available	PANTHER	PTHR22930:SF27	SUBFAMILY NOT NAMED	coord: 1..245 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.036070	CSPI01G16660	Wild cucumber (PI 183967)	cgycpiB008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.036070	Bottle gourd (USVL1VR-Ls)	cgylsiB009
Cucsa.036070	Melon (DHL92) v3.6.1	cgymedB010
Cucsa.036070	Cucumber (Chinese Long) v3	cgycucB011
Cucsa.036070	Watermelon (97103) v2	cgywmbB010
Cucsa.036070	Cucumber (Chinese Long) v2	cgycuB008
Cucsa.036070	Melon (DHL92) v3.5.1	cgymeB008
Cucsa.036070	Watermelon (Charleston Gray)	cgywcgB010
Cucsa.036070	Watermelon (97103) v1	cgywmB011