Cucsa.033610 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.033610
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCytochrome b-c1 complex subunit Rieske, mitochondrial
Locationscaffold00438 : 23753 .. 27357 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGAGGTTATAGATACGAGTCTTGCGCCCTATGCGTCTCTTCTTCTGAGTTTTCGTTGTCCCTCCAAAATCCAAACCTGAAGCTTGGCGAAGATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCCACCATTGCTTCTTCTTTCCCCGCTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCAACACTTTTCCCATCCGATCTCAATTTGATCGCCACTCTAGAGGTTTTCTTCTTACCTCTTTATTTCTTCATTCATTGCCTTTTCTTTtAGGGTTTTTTTTTTttttCTGGCGATGCGATGCGATTCCTTTTtCCCTCTTTTAGCCCGCCAAATCAGTATCTGGATTGCACTTGCTGTTGCCGCGTTATTGATATTCGTAATTGTTGATCTACTGTTCGATCTCTTTTGGTTATTATGATTCATGGTTTTTGTATATTGGTTTCTCGTTTTGTAAATAATTTCAATTTGTGAACAGGTTGTTTTCTGGTACTTTTGGGGCATTTTAACGATATCAATCTTCACCCAAACAATCGCTTCTTCTTCTTATTCTTTCGTTTCTAAATCTTCCACTGTGAAATGTTTCTtCTTTTTTTTtAAAAAaTAAAATCTACTATTTCAGCTCATACTTTTAACATTATTTTGATCTTTCATGATATATCTACTTGAAACTACGTGATAGCATTCATATGCTATAGTACAGAAGTTTTTGTGTGAATTGGTCAGTGGGATCATATCTTACTTTAATTCCATATTTTATGTGCTTAGAAAATTTTGAATTGGTTCTGGTGAAAGCTCACCAGTATCAATATGAGGTATTTCGAATAGCAGATTTATTATAGTTCTTTTTTTtGGGCTGTTCGTTAGGTATAATTTATTGTTGTTGTTATCCACAATGTCTAAGCCATTCTCTTCCCCGTGTAGAGTGTTCATGTTATTATCAGGAAGAATTTTGATCAATTTCCTGAATTTGAATATACTATCAATAAAATTTGCTAACAGTATTTTACCTTTTTGTTGTACGAAATAATGTAGTATGAGCATAAGAATAAACGAACTAGACTATAATTACAAAATAACTTCTTCTTATGCACCATAAACAAAAAATGATTGGAGAATTCCAGACAATGGATAGACTTTTGAGAAAGATGCCTTCGATAATGGGTCCTTTCTGTTGTGTCCTTTGTCAGAAGGTGGAGGAAAACCTAGATCACTTTCTGGGAGTGTTAGTATGCGAGTTATGTGTGAAATTGCTTGTTTAGGAGTTTGATTTTGTGTTAGCTCACCAGAGGGATATTTGTATGGTGATTGGAGAGTTCCTCCTTCATCCACTTTTCAAAGAGAAAGGCTGTCTTCTGTGGTTTGTGGGTGTGTTCGGTTTTTtGTGGGATCTTTGGGGGAAGAGGAAAAaCAAAGTGTTTAGAGTTGTAGATTGGGTCGCTAGTCAGGTTTTGTCCTTGATGTGGTTCCATGTTTCTTGTTGGGCTTCACTTTTGAAGAATTTTTATAATTTTTCTCTAGGAATGAACTTACTTAGTTGTGGGGTTGTAGTTTTtCCTGTGGGTTTGGGTTTTtCGTATGCACTTGTATTCTCTCATTTTTTTTtCTCTCAATGAAAGCAGGTGTTTCTATAATAAAAGGGATTTCTGTTTACAACATAGGATTGTAGAGTGTTTCAATTAGATGGTGACATATTTCTCTTCTAATTAAAAACTTTGTACAATCTGTTGTTCAACTCGTTCTTTTTATTTATTCTTTCCTTCTATTGAAAAAAGGTTCGTTCATTGTACAGTCGCACAGAAAATACAGAACCCTATTTATATCGTTTTACATTCGTTTGAAATACTGACCTTGGACACCCCAAAGAAGATGTATTTGTACATTGGTACAAAAGAATCGAAAAGTGTAGGAGTTATCTTCATAGACCTGGTTTCTTTCCTTCCAGGTTCCACTCATTTGTCTCCAAAAAAATTAATCCTGCCTCTACTTTTAGTTTTAGTTTTGAAGTTAATTTGAAGAAAAACACACTAGTTCTTGCAATGTCAAAACAATGTAGATACACATTTTGGTGGATGGAAAGTCCTCCCGTTCACACCCATGAATGTTAAAGATAGTCCTGTTCCATGGGCCCTGAAGTTAAATCTATTCAAACTCGTGTTGAAAGTTCTTAAGATTTGCTCTAGAAATTAGGGAATAACAGGAACAATTATAGAATACTTTCGTTATCTTGAGAATTTGTCTTCTATGCCTCTGTGATGGTTGGTTTGTAATACTCTTTTACAAAATTGACTGGCCGTTGTAACTGAACTTTTTGTTTCTGGATATTTTATATGCACAACTAATTTATAAATATTCCTCTGTATATGCACATGGCTTGTTATGAAGTTTTACTCCCTGCCTTTTTATGAAAGTCGAGGATAGAAATATTGGTTACGAATCTATTGGCATATTGGAAATGGTTTAGAGGCATGCTTTTCTGGTCGAGCATTCTATAATTTGGTTTTATATCTAATACTAATTATTATAAATAACAATAGTAATCAAAGGCAATTATATGGTTATTGTTTGGAATCTGTCTTTGACAGTTATTGTTTAGAGGTTGTGCATGAGCTTCTCAATTTATAATTTGTGCAATGGAAATGGCTCTGCTAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAAGAAACCAATCTCTACTTTTTGAGGTAATACCGAGGTTCAAGTCCTTCAATTCTCAATTCTTATTTAAAGCAGATAAAAGTTGGAAGACATATTTTGTTTCTTCTTTACTCCTTTGAGATTTTAGAAAAAAAGCTTTATGCAGTGAGAAAACACTGTAACTGTAACATTTGCTTGGTTCATGAATGAATCTGAATAATTTTTCTGAATGAGTGGAAGTTATTAGATTAGAAGATACCACCCTCCTAGGAGTGGACAAAACA

mRNA sequence

TGTGAGGTTATAGATACGAGTCTTGCGCCCTATGCGTCTCTTCTTCTGAGTTTTCGTTGTCCCTCCAAAATCCAAACCTGAAGCTTGGCGAAGATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCCACCATTGCTTCTTCTTTCCCCGCTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCAACACTTTTCCCATCCGATCTCAATTTGATCGCCACTCTAGAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAAGAAACCAATCTCTACTTTTTGAGGTAATACCGAGGTTCAAGTCCTTCAATTCTCAATTCTTATTTAAAGCAGATAAAAGTTGGAAGACATATTTTGTTTCTTCTTTACTCCTTTGAGATTTTAGAAAAAAAGCTTTATGCAGTGAGAAAACACTGTAACTGTAACATTTGCTTGGTTCATGAATGAATCTGAATAATTTTTCTGAATGAGTGGAAGTTATTAGATTAGAAGATACCACCCTCCTAGGAGTGGACAAAACA

Coding sequence (CDS)

ATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCCACCATTGCTTCTTCTTTCCCCGCTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCAACACTTTTCCCATCCGATCTCAATTTGATCGCCACTCTAGAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAA

Protein sequence

MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG*
Homology
[Close]
BLAST of Cucsa.033610 vs. Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.2e-115
Identity = 207/276 (75.00%), Postives = 235/276 (85.14%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASS--FPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRH 60
           MLRIA RR SSLS    R    SS  F ++++     DS+  RS     +  + S F  H
Sbjct: 1   MLRIAGRRASSLSRWPVRSVAPSSSAFISANHFSSDDDSSSPRSI----SPSLASVFLHH 60

Query: 61  SRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVL 120
           +RGF+S++++   D GL+ D+P TVAA+KNP+SKIVYD++NHER+PPGDPSKRAFAYFVL
Sbjct: 61  TRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPC 240
           RTEDDI LANSVD+GSLRDPQQD ERVK PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPC
Sbjct: 181 RTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]
BLAST of Cucsa.033610 vs. Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-112
Identity = 204/274 (74.45%), Postives = 232/274 (84.67%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIA R+LSS ++     T +SS   + N    TD +    A   +   + SQF    R
Sbjct: 1   MLRIAGRKLSSSAA-----TRSSSAFFTRNPFTFTDDSS-SPARSPSPASLASQFLDQFR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DI LANSVD+GSLRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYSF+E NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]
BLAST of Cucsa.033610 vs. Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-112
Identity = 204/274 (74.45%), Postives = 232/274 (84.67%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLR+A RRLSS ++       +S+F    +   + DS+  RS     +  + S F    R
Sbjct: 1   MLRVAGRRLSSSAARS-----SSTFFTRSSFTVTDDSSPARSP----SPSLTSSFLDQIR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           +DDIKLANSVD+G+LRDPQQD ERVK+PEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 DDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]
BLAST of Cucsa.033610 vs. Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.3e-112
Identity = 202/274 (73.72%), Postives = 232/274 (84.67%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIA R+LSS +++      +SS   + N    TD +   +     T  + SQF    R
Sbjct: 1   MLRIAGRKLSSSAAAR-----SSSAFFTRNPFTFTDDSSSPTRSPSPT-SLASQFLDQFR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           ++DI LANSVD+GSLRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 DEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYSF+E NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]
BLAST of Cucsa.033610 vs. Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.1e-111
Identity = 194/253 (76.68%), Postives = 225/253 (88.93%), Query Frame = 1 

Query: 22  ASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSRGFASDALASTKDDGLILDIPA 81
           +S+F ++++     DS+  RS     +  + S F  H+RGF+S++++   D GL+ D+P 
Sbjct: 10  SSAFISANHFSSDDDSSSPRSI----SPSLASVFLHHTRGFSSNSVSPAHDMGLVPDLPP 69

Query: 82  TVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMS 141
           TVAA+KNP+SKIVYD++NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFVLSMS
Sbjct: 70  TVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMS 129

Query: 142 ASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQD 201
           ASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDI LANSVD+GSLRDPQQD
Sbjct: 130 ASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQD 189

Query: 202 EERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVP 261
            ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVP
Sbjct: 190 AERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP 249

Query: 262 TYSFLEGNKLLIG 275
           TYSFLE NKLLIG
Sbjct: 250 TYSFLEENKLLIG 258

[Close]
BLAST of Cucsa.033610 vs. TrEMBL
Match: A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 4.9e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]
BLAST of Cucsa.033610 vs. TrEMBL
Match: A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 2.5e-143
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]
BLAST of Cucsa.033610 vs. TrEMBL
Match: M5WT51_PRUPE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE_ppa009909mg PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.5e-119
Identity = 218/277 (78.70%), Postives = 242/277 (87.36%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPT---IASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDR 60
           MLR+AARRL SLS+S +RP     ASS   S N+ID  DS+D   + +F T      F  
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDSSDDLRSIYFTT-----DFYL 60

Query: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
            SRGFASD+L  +KD+ L+ D+P TVAAVKNP+SKIVYDDYNHER+PPGDPSKRAFAYFV
Sbjct: 61  PSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRT+DDIKLANSVD+ SLRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

[Close]
BLAST of Cucsa.033610 vs. TrEMBL
Match: A0A0K9QA72_SPIOL (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Spinacia oleracea GN=SOVF_202070 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.8e-117
Identity = 213/274 (77.74%), Postives = 236/274 (86.13%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLR+AARRLSSLSSS +RP  +S+  +   +  S D  + RS   F           H R
Sbjct: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPL--SRDDEECRSTPLFVP-----HLYSHYR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFAS+ L    + G+ILD+PATV A+KNPSSKI YD+YNHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVD+GSLRDPQ+DEERVK+PEWL+V+GVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLL+G
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 267

[Close]
BLAST of Cucsa.033610 vs. TrEMBL
Match: A0A060ILM1_PANGI (Ubiquinol-cytochrome C reductase iron-sulfur subunit OS=Panax ginseng GN=QCR PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.8e-117
Identity = 220/281 (78.29%), Postives = 242/281 (86.12%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNII----DSTDSNDF--RSAGFFNTFPI-RS 60
           MLR+A RRLSS+SS     T A+S  + + I     DS+ S+D    +A F N+FP+   
Sbjct: 1   MLRVAGRRLSSVSSWRPSQTAAASTFSKNPINTAGGDSSSSDDHGGSTAFFSNSFPLMHH 60

Query: 61  QFDRHSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAF 120
           QF   SRGFASD L S  ++ +I DIPATVAAVKNP+SKIVYD YNHER+PPGDPSKRAF
Sbjct: 61  QFHIPSRGFASDVLISKNNNSIIPDIPATVAAVKNPTSKIVYDSYNHERYPPGDPSKRAF 120

Query: 121 AYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKP 180
           AYFVL+GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKP
Sbjct: 121 AYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKP 180

Query: 181 VFIRRRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGG 240
           VFIRRRTE+DIKLANSVD+GSLRDPQ+D  RVKDPEWL+VVGVCTHLGCIPLPNAGDYGG
Sbjct: 181 VFIRRRTEEDIKLANSVDVGSLRDPQEDAVRVKDPEWLIVVGVCTHLGCIPLPNAGDYGG 240

Query: 241 WFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           WFCPCHGSHYD+SGRIRKGPAPYNLEVPTYSFLE NKL+IG
Sbjct: 241 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLMIG 281

[Close]
BLAST of Cucsa.033610 vs. TAIR10
Match: AT5G13430.1 (AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-111
Identity = 203/275 (73.82%), Postives = 225/275 (81.82%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHS- 60
           MLR+A RRL S+S    R + A+SF  S +   S    D  SA         S + R   
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAPRSLPSADLSSYHRSLI 60

Query: 61  RGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLS 120
           RGF+S  LA   + G   ++PATV AVK P+SKIVYDD+NHER+PPGDPSKRAFAYFVLS
Sbjct: 61  RGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLS 120

Query: 121 GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRR 180
           GGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIRRR
Sbjct: 121 GGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 180

Query: 181 TEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH 240
           TEDDIKLANSVD+GSLRDPQ+D  RVK+PEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH
Sbjct: 181 TEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH 240

Query: 241 GSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           GSHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 GSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]
BLAST of Cucsa.033610 vs. TAIR10
Match: AT5G13440.1 (AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 397.5 bits (1020), Expect = 6.6e-111
Identity = 201/277 (72.56%), Postives = 226/277 (81.59%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPAS--HNIIDSTDSNDF-RSAGFFNTFPIRSQFDR 60
           MLR+A RRL S+S    R + A+SF  S  H + D  +S+   RS    +     S    
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFNSYHRS 60

Query: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
             RGFAS  +    + G   ++PATV AVK P+SKIVYDD+NHER+PPGDPSKRAFAYFV
Sbjct: 61  VIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]
BLAST of Cucsa.033610 vs. TAIR10
Match: AT4G03280.1 (AT4G03280.1 photosynthetic electron transfer C)

HSP 1 Score: 55.8 bits (133), Expect = 4.7e-08
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 1 

Query: 207 DPEWLVVVG-----------VCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAP 266
           DP +LVV             VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP
Sbjct: 136 DPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAP 195

Query: 267 YNLEVPTYSFLEGNKLL 273
            +L +      E  K+L
Sbjct: 196 LSLALAHADIDEAGKVL 211

[Close]
BLAST of Cucsa.033610 vs. NCBI nr
Match: gi|449452030|ref|XP_004143763.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 555.1 bits (1429), Expect = 7.1e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]
BLAST of Cucsa.033610 vs. NCBI nr
Match: gi|659072408|ref|XP_008465498.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 6.2e-151
Identity = 267/274 (97.45%), Postives = 269/274 (98.18%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASS P SHNIIDS DSNDFRSAGFFNTFPIR  FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALASTKDDGLI+DIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]
BLAST of Cucsa.033610 vs. NCBI nr
Match: gi|449452028|ref|XP_004143762.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 3.6e-143
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]
BLAST of Cucsa.033610 vs. NCBI nr
Match: gi|659072410|ref|XP_008465508.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 513.1 bits (1320), Expect = 3.1e-142
Identity = 250/274 (91.24%), Postives = 262/274 (95.62%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRS GFFNTFPI   FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDSNDFRSGGFFNTFPIGPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL+S K+  L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]
BLAST of Cucsa.033610 vs. NCBI nr
Match: gi|595939955|ref|XP_007215798.1| (hypothetical protein PRUPE_ppa009909mg [Prunus persica])

HSP 1 Score: 437.2 bits (1123), Expect = 2.1e-119
Identity = 218/277 (78.70%), Postives = 242/277 (87.36%), Query Frame = 1 

Query: 1   MLRIAARRLSSLSSSHFRPT---IASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDR 60
           MLR+AARRL SLS+S +RP     ASS   S N+ID  DS+D   + +F T      F  
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDSSDDLRSIYFTT-----DFYL 60

Query: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
            SRGFASD+L  +KD+ L+ D+P TVAAVKNP+SKIVYDDYNHER+PPGDPSKRAFAYFV
Sbjct: 61  PSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRT+DDIKLANSVD+ SLRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

The following BLAST results are available for this feature:
BLAST of Cucsa.033610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UCRI2_TOBAC4.2e-11575.00Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=... [more]
UCRI3_TOBAC1.9e-11274.45Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=... [more]
UCRI_SOLTU1.9e-11274.45Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FE... [more]
UCRI5_TOBAC4.3e-11273.72Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=... [more]
UCRI1_TOBAC2.1e-11176.68Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ... [more]
BLAST of Cucsa.033610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTT3_CUCSA4.9e-155100.00Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_... [more]
A0A0A0KNC0_CUCSA2.5e-14391.24Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_... [more]
M5WT51_PRUPE1.5e-11978.70Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE... [more]
A0A0K9QA72_SPIOL1.8e-11777.74Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Spinacia oleracea GN=SO... [more]
A0A060ILM1_PANGI1.8e-11778.29Ubiquinol-cytochrome C reductase iron-sulfur subunit OS=Panax ginseng GN=QCR PE=... [more]
BLAST of Cucsa.033610 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G13430.13.0e-11173.82 Ubiquinol-cytochrome C reductase iron-sulfur subunit[more]
AT5G13440.16.6e-11172.56 Ubiquinol-cytochrome C reductase iron-sulfur subunit[more]
AT4G03280.14.7e-0838.96 photosynthetic electron transfer C[more]
BLAST of Cucsa.033610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449452030|ref|XP_004143763.1|7.1e-155100.00PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|659072408|ref|XP_008465498.1|6.2e-15197.45PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|449452028|ref|XP_004143762.1|3.6e-14391.24PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|659072410|ref|XP_008465508.1|3.1e-14291.24PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|595939955|ref|XP_007215798.1|2.1e-11978.70hypothetical protein PRUPE_ppa009909mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004192Rieske_TM
IPR005805Rieske_Fe-S_prot_C
IPR006317Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR014349Rieske_Fe-S_prot
IPR017941Rieske_2Fe-2S
Vocabulary: Molecular Function
TermDefinition
GO:0008121ubiquinol-cytochrome-c reductase activity
GO:0016679oxidoreductase activity, acting on diphenols and related substances as donors
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respiratory chain
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0016020 membrane
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.033610.1Cucsa.033610.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004192Ubiquinol cytochrome reductase, transmembrane domainGENE3DG3DSA:1.20.5.270coord: 97..134
score: 3.
IPR004192Ubiquinol cytochrome reductase, transmembrane domainPFAMPF02921UCR_TMcoord: 100..145
score: 4.4
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 212..223
score: 2.4E-17coord: 234..246
score: 2.4E-17coord: 246..258
score: 2.4
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitTIGRFAMsTIGR01416TIGR01416coord: 130..274
score: 1.2
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 2..274
score: 3.2E
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3DG3DSA:2.102.10.10coord: 135..273
score: 5.1
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 157..260
score: 2.3
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROFILEPS51296RIESKEcoord: 204..272
score: 18
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 136..273
score: 3.67
NoneNo IPR availablePANTHERPTHR10134:SF1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 2..274
score: 3.2E
NoneNo IPR availableunknownSSF81502ISP transmembrane anchorcoord: 85..147
score: 5.01

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.033610Cucumber (Chinese Long) v3cgycucB008
Cucsa.033610Watermelon (97103) v2cgywmbB006
Cucsa.033610Cucurbita maxima (Rimu)cgycmaB0014
Cucsa.033610Cucurbita maxima (Rimu)cgycmaB0015
Cucsa.033610Cucurbita moschata (Rifu)cgycmoB0014
Cucsa.033610Wild cucumber (PI 183967)cgycpiB005
Cucsa.033610Cucumber (Chinese Long) v2cgycuB005
Cucsa.033610Melon (DHL92) v3.5.1cgymeB005
Cucsa.033610Watermelon (Charleston Gray)cgywcgB007
Cucsa.033610Cucurbita pepo (Zucchini)cgycpeB0012
Cucsa.033610Cucurbita pepo (Zucchini)cgycpeB0013
Cucsa.033610Bottle gourd (USVL1VR-Ls)cgylsiB005
Cucsa.033610Melon (DHL92) v3.6.1cgymedB007