Cucsa.031730 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.031730
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRetrovirus-related Pol polyprotein LINE-1
Locationscaffold00429 : 924153 .. 925314 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAACTCATTCATTGATGACTCAAAACTCATTGAAGTTCCTTTATTGAATGGGAAGTTTACATGGTCAAGAGAAGGAAGAACAGCTTTGACATCCTTGCTGGACAGATTCTCAGTTTCTTTTAACTGGGACGAGGCATTTGCGAACACAAGAGTAAACCAACAAGGAAGGATATCCTCAGACCACTTCCTTATTTTACTAGAAGCAGGGGCTTTCGAATTGGGGCCTTCCCCCTTTAGATTTTGTAACAGCTGGTTGTTTGACAAGCAATGCTGCCAAATCATTGAAAACTCTTTATCCTTGAGCAATCCACCAGAATGGATGGACTTTGCACCATCAAATAAACTTCGGAGCATCAAGGACCAGCAAAAAACTTGGAACTTAGATCACAGAAAGGAACAGAATTATCAAGAAGAAACCCTTTTAAAGGCCATTGCACAAGAAGAAAGTAAATATGATCAATAAGAGACGGACACCATGGATCAACTATTGTTACTGTCCAAGAAAGAGAGACCTACTAGCTCTACATAGAAGGGAGGAAAGAGATTCAATCCAGAAAAGTAAACTGAATTTGCTGAAATTGGGGGACGAAAATACAAGCCTTTTCCAACCTTTTCTTGCAACAAAAAAGAAACGAAGTCTGATTCCCAAGCTAGTTAGTGATCAAGGAATCCTCACCACCTCTTTCTCGGAAATTAAGCATTTAATCCTTGACTTCTACAGCAACCTTTATGAGAAATCTGATCGTGCAGGTACCTTCCCTTCCACTTTTGACTGGTCTATAGTTTCAGGGGATCAGAATAAAAAGCTCACTGCAAAATTCAGTCTGCTGGAAATTGTGGCAGCCATAAATTCACTGGGAAGAAACAAAGCTCCAGGAGAATGGAAACTAAATGTGTGCGTAGAGGAGAACTTTATTTGTCTAATCAAGAAAAAGGAAGATGCAATAAAGGTAAGAGACTTTCGACCCATAAGTCTCACTGCTTTGTTGTACAAATTGACTACCAAAGTGCTCTGAGAGAATGAAAATAATCATACCCAGTATAATAACGCCCTCACAAAGTGCCTGTTTGGAAGGCCGCCAAATCCTGGATCCTATTCTAGCAAACGAAGCTGTGGAGGACTGTAGGCATAAGAAAAGGCAAGGTTGGACTATCAAATAG

mRNA sequence

gaaactcattcattgatgactcaaaactcattgaagttcctttattgaatgggaagtttacatggtcaagagaaggaagaacagctttgacatccttgctggacagattctcagtttcttttaactgggacgaggcatttgcgaacacaagagtaaaccaacaaggaaggatatcctcagaccacttccttattttactagaagcaggggctttcgaattggggccttccccctttagattttgtaacagctggttgtttgacaagcaatgctgccaaatcattgaaaactctttatccttgagcaatccaccagaatggatggactttgcaccatcaaataaacttcggagcatcaaggaccagcaaaaaacttggaacttagatcacagaaaggaacagaattatcaagaagaaacccttttaaaggccattgcacaagaagaaactctacatagaagggaggaaagagattcaatccagaaaagtaaactgaatttgctgaaattgggggacgaaaatacaagccttttccaaccttttcttgcaacaaaaaagaaacgaagtctgattcccaagctagttagtgatcaaggaatcctcaccacctctttctcggaaattaagcatttaatccttgacttctacagcaacctttatgagaaatctgatcgtgcaggtaccttcccttccacttttgactggtctatagtttcaggggatcagaataaaaagctcactgcaaaattcagtctgctggaaatTGTGGCAGCCATAAATTCACTGGGAAGAAACAAAGCtccaggagaatggaaactaaatgtgtgcgtagaggagaactttatttgtctaatcaagaaaaaggaagatgcaataaaggtaagagactttcgacccataagtctcactgctttgttaatgaaaataatcatacccagtataataacgccctcacaaagtgcctgtttggaaggccgccaaatcctggatcctattctagcaaacgaagctgtggaggactgtaggcataagaaaaggcaaggttggactatcaaatag

Coding sequence (CDS)

GAAACTCATTCATTGATGACTCAAAACTCATTGAAGTTCCTTTATTGAATGGGAAGTTTACATGGTCAAGAGAAGGAAGAACAGCTTTGACATCCTTGCTGGACAGATTCTCAGTTTCTTTTAACTGGGACGAGGCATTTGCGAACACAAGAGTAAACCAACAAGGAAGGATATCCTCAGACCACTTCCTTATTTTACTAGAAGCAGGGGCTTTCGAATTGGGGCCTTCCCCCTTTAGATTTTGTAACAGCTGGTTGTTTGACAAGCAATGCTGCCAAATCATTGAAAACTCTTTATCCTTGAGCAATCCACCAGAATGGATGGACTTTGCACCATCAAATAAACTTCGGAGCATCAAGGACCAGCAAAAAACTTGGAACTTAGATCACAGAAAGGAACAGAATTATCAAGAAGAAACCCTTTTAAAGGCCATTGCACAAGAAGAAACTCTACATAGAAGGGAGGAAAGAGATTCAATCCAGAAAAGTAAACTGAATTTGCTGAAATTGGGGGACGAAAATACAAGCCTTTTCCAACCTTTTCTTGCAACAAAAAAGAAACGAAGTCTGATTCCCAAGCTAGTTAGTGATCAAGGAATCCTCACCACCTCTTTCTCGGAAATTAAGCATTTAATCCTTGACTTCTACAGCAACCTTTATGAGAAATCTGATCGTGCAGGTACCTTCCCTTCCACTTTTGACTGGTCTATAGTTTCAGGGGATCAGAATAAAAAGCTCACTGCAAAATTCAGTCTGCTGGAAATTGTGGCAGCCATAAATTCACTGGGAAGAAACAAAGCTCCAGGAGAATGGAAACTAAATGTGTGCGTAGAGGAGAACTTTATTTGTCTAATCAAGAAAAAGGAAGATGCAATAAAGGTAAGAGACTTTCGACCCATAAGTCTCACTGCTTTGTTAATGAAAATAATCATACCCAGTATAATAACGCCCTCACAAAGTGCCTGTTTGGAAGGCCGCCAAATCCTGGATCCTATTCTAGCAAACGAAGCTGTGGAGGACTGTAGGCATAAGAAAAGGCAAGGTTGGACTATCAAATAG

Protein sequence

NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSDHFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKDQQKTWNLDHRKEQNYQEETLLKAIAQEETLHRREERDSIQKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKLVSDQGILTTSFSEIKHLILDFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGEWKLNVCVEENFICLIKKKEDAIKVRDFRPISLTALLMKIIIPSIITPSQSACLEGRQILDPILANEAVEDCRHKKRQGWTIK*
Homology
[Close]
BLAST of Cucsa.031730 vs. TrEMBL
Match: M5WPQ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016677mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38
Identity = 129/420 (30.71%), Postives = 193/420 (45.95%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N FI ++ L +  LLN  FTWS     A+   LDRF VS +W+E F + R     RI+SD
Sbjct: 432 NDFIQETNLRDPILLNASFTWSNLRENAVCRRLDRFLVSGSWEEHFPHYRHKALPRITSD 491

Query: 61  HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
           H  I L++   + GPSPFRF N WL      + I+        P W  +    +L+ +K 
Sbjct: 492 HCPIELDSSRVKWGPSPFRFENMWLNHPDFKRKIKLWWGEDQIPGWEGYKFMTRLKMLKS 551

Query: 121 QQKTWNLDHRKEQNYQEETLLKAIAQEETLHRRE-----------ERDSI---------- 180
           + K W+   ++E    E  L +A A+   L +RE           ERD++          
Sbjct: 552 KLKVWS---KEEFGDVERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQR 611

Query: 181 ------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
                 Q+ K+   + GD NT  F       +KR+ I KL V D G++    + I+  ++
Sbjct: 612 EEVKWRQRGKVKWAREGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVD-ANIEREVI 671

Query: 241 DFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGE--- 300
            F+  LY ++   G      +W  +S  +   L   F L E+  A+   G++K+PG    
Sbjct: 672 RFFKGLYSRNKNVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFDCGKDKSPGPDGF 731

Query: 301 --------WK------------------LNVCVEENFICLIKKKEDAIKVRDFRPISLTA 352
                   W+                  +N    E FICLI KK +++KV D+RPISL  
Sbjct: 732 SMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVT 791

[Close]
BLAST of Cucsa.031730 vs. TrEMBL
Match: M5VS59_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016504mg PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.0e-37
Identity = 128/420 (30.48%), Postives = 190/420 (45.24%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N FI ++ L +  LLN  FTWS     A+   LDRF VS +W++ F + R     RI+SD
Sbjct: 150 NDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSD 209

Query: 61  HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
           H  I L+    + GPSPFRF N WL      + I+        P W  +    +L+ +K 
Sbjct: 210 HCPIELDTSRVKWGPSPFRFENMWLNHPDFMRKIKLWWGEDQIPGWEGYKFMTRLKMLKS 269

Query: 121 QQKTWNLDHRKEQNYQEETLLKAIAQEETLHRRE-----------ERDSI---------- 180
           + K W+   ++E    E  L +A A+   L +RE           ERD++          
Sbjct: 270 KLKVWS---KEEFGDVERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQK 329

Query: 181 ------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
                 Q+ K+   + GD NT  F       +KR+ I KL V D G++    + I+  ++
Sbjct: 330 EEVKWRQRGKVKWAREGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVD-ANIEREVI 389

Query: 241 DFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGE--- 300
            F+  LY  +   G      +W  +S  +   L   F L E+  A+   G++K+PG    
Sbjct: 390 RFFKGLYSSNKNVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGF 449

Query: 301 --------WK------------------LNVCVEENFICLIKKKEDAIKVRDFRPISLTA 352
                   W+                  +N    E FICLI KK +++KV D RPISL  
Sbjct: 450 SMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDNRPISLVT 509

[Close]
BLAST of Cucsa.031730 vs. TrEMBL
Match: M5W647_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-36
Identity = 123/391 (31.46%), Postives = 189/391 (48.34%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N+FIDD+ L +  LLN  FTWS     A+   LDRF  S  W+++F + +     R++ D
Sbjct: 152 NNFIDDTNLRDPNLLNASFTWSNFRENAVCRKLDRFLFSEAWEDSFPHVKHTALARVTFD 211

Query: 61  HFLILLEAGAFELGPSPFRFCNSWL---FDKQCCQIIENSLSLSNPPEWMDFAPSNKLRS 120
           H  I L+    + GP PFRF N W+   + K+  ++      ++    W  +  S +LR+
Sbjct: 212 HCPIRLDTSNLKWGPGPFRFENMWIDYPYFKKKFKLWWGEDQING---WEGYKFSRRLRT 271

Query: 121 IKDQQKTWN-------LDHRKEQNYQEETL--------LKAIAQEE---------TLHRR 180
           IK + K WN       +  +KE   +   L        L  I ++E          L  +
Sbjct: 272 IKQKIKDWNKEVFGDLVSAKKEAEARIAALDLMEGQGGLDNILRKEREDLYFKVSDLVHK 331

Query: 181 EERDSIQKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
           EE    Q+ K+   + GD NT  F    + ++KR+ I KL V+  G++  S  EI+  I+
Sbjct: 332 EEVKWRQRGKIQWARDGDSNTKFFHRIASGRRKRNFIQKLEVAGDGVV-VSEGEIELEII 391

Query: 241 DFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGEWKL 300
           +F+ NLY  +  AG      +W+ +S ++ + L   F   E+  A              +
Sbjct: 392 NFFKNLYSSNAEAGWCLEGLNWNAISVEEAEWLERPFEEEEVKRADLMKVMVDFFNCGII 451

Query: 301 NVCVEENFICLIKKKEDAIKVRDFRPISLTALLMKI-----------IIPSIITPSQSAC 352
           N    E FICLI KK+++IKV DFRPISL   L K+           ++ S I+  QSA 
Sbjct: 452 NAITNETFICLIPKKKESIKVSDFRPISLVTSLYKMVSKVLASRLREVLGSTISSYQSAF 511

[Close]
BLAST of Cucsa.031730 vs. TrEMBL
Match: M5WJ76_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015871mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.4e-34
Identity = 125/407 (30.71%), Postives = 180/407 (44.23%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N FI ++ L +  LLN  FTWS     A+   LDRF VS +W+E F + R     RI+SD
Sbjct: 486 NDFIQETNLRDPILLNASFTWSNLRENAVCRRLDRFLVSGSWEEHFPHYRHKALPRITSD 545

Query: 61  HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
           H  I L+    + GPSPFRF N WL      + I+        P W  +    +L+ +K 
Sbjct: 546 HCPIELDTSRVKWGPSPFRFENMWLNHPDFKRKIKLWWGEDQIPGWEGYKFMTRLKMLKS 605

Query: 121 QQKTWNLDHRKEQNYQEETLLKAIAQEETLHRRE-----------ERDSI---------- 180
           + K W+   ++E    E  L +A A+   L +RE           ERD++          
Sbjct: 606 KLKVWS---KEEFGDVERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQK 665

Query: 181 ------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
                 Q+ K+   + GD NT  F       +KR+ I KL V D G++    + I+  ++
Sbjct: 666 EEVKWRQRGKVKWARDGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVD-ANIEREVI 725

Query: 241 DFYSNLYEKSDRAGTF---------PSTFD-------WSIVSGDQNKKLTAKFSLLEIVA 300
            F+  LY  +     F         P  F        W +V GD  K +   F       
Sbjct: 726 RFFKGLYSSNKNKAVFDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQ------ 785

Query: 301 AINSLGRNKAPGEWKLNVCVEENFICLIKKKEDAIKVRDFRPISLTALLMKII------- 352
                          +N    E FICLI KK +++KV D+RPISL   L K+I       
Sbjct: 786 ------------SGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLASS 845

[Close]
BLAST of Cucsa.031730 vs. TrEMBL
Match: M5XHS0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020085mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33
Identity = 129/424 (30.42%), Postives = 187/424 (44.10%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N FI ++ L +  LLN  FTWS     A+   LDRF VS +W++ F + R     RI+SD
Sbjct: 154 NDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSD 213

Query: 61  HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
           H  I L+    + GPSPFRF N WL                N P   DF    KL   +D
Sbjct: 214 HCPIELDTSRVKWGPSPFRFENMWL----------------NHP---DFKRKIKLWWGED 273

Query: 121 QQKTWN----LDHRKEQNYQEETLLKAIAQEETLHRRE-----------ERDSI------ 180
           Q   W     +  ++     E  L +A A+   L +RE           ERD++      
Sbjct: 274 QILGWEGYKFMTSKEVFGDVERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGD 333

Query: 181 ----------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIK 240
                     Q+ K+   + GD NT  F    +  +KR+ I KL V D G++    + I+
Sbjct: 334 LAQKEEVKWRQRGKVKWAREGDGNTKFFHRVASGARKRNYIEKLEVEDLGVIEVD-ANIE 393

Query: 241 HLILDFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPG 300
             ++ F+  LY  +   G      +W  +S  +   L   F L E+  A+   G++K+PG
Sbjct: 394 REVIRFFKGLYSSNKNVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPG 453

Query: 301 E-----------WK------------------LNVCVEENFICLIKKKEDAIKVRDFRPI 352
                       W+                  +N    E FICLI KK +++KV D+RPI
Sbjct: 454 PDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPI 513

[Close]
BLAST of Cucsa.031730 vs. NCBI nr
Match: gi|595905097|ref|XP_007214027.1| (hypothetical protein PRUPE_ppa016677mg [Prunus persica])

HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 129/420 (30.71%), Postives = 193/420 (45.95%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N FI ++ L +  LLN  FTWS     A+   LDRF VS +W+E F + R     RI+SD
Sbjct: 432 NDFIQETNLRDPILLNASFTWSNLRENAVCRRLDRFLVSGSWEEHFPHYRHKALPRITSD 491

Query: 61  HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
           H  I L++   + GPSPFRF N WL      + I+        P W  +    +L+ +K 
Sbjct: 492 HCPIELDSSRVKWGPSPFRFENMWLNHPDFKRKIKLWWGEDQIPGWEGYKFMTRLKMLKS 551

Query: 121 QQKTWNLDHRKEQNYQEETLLKAIAQEETLHRRE-----------ERDSI---------- 180
           + K W+   ++E    E  L +A A+   L +RE           ERD++          
Sbjct: 552 KLKVWS---KEEFGDVERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQR 611

Query: 181 ------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
                 Q+ K+   + GD NT  F       +KR+ I KL V D G++    + I+  ++
Sbjct: 612 EEVKWRQRGKVKWAREGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVD-ANIEREVI 671

Query: 241 DFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGE--- 300
            F+  LY ++   G      +W  +S  +   L   F L E+  A+   G++K+PG    
Sbjct: 672 RFFKGLYSRNKNVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFDCGKDKSPGPDGF 731

Query: 301 --------WK------------------LNVCVEENFICLIKKKEDAIKVRDFRPISLTA 352
                   W+                  +N    E FICLI KK +++KV D+RPISL  
Sbjct: 732 SMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVT 791

[Close]
BLAST of Cucsa.031730 vs. NCBI nr
Match: gi|595809689|ref|XP_007202950.1| (hypothetical protein PRUPE_ppa016504mg, partial [Prunus persica])

HSP 1 Score: 162.9 bits (411), Expect = 1.0e-36
Identity = 128/420 (30.48%), Postives = 190/420 (45.24%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N FI ++ L +  LLN  FTWS     A+   LDRF VS +W++ F + R     RI+SD
Sbjct: 150 NDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSD 209

Query: 61  HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
           H  I L+    + GPSPFRF N WL      + I+        P W  +    +L+ +K 
Sbjct: 210 HCPIELDTSRVKWGPSPFRFENMWLNHPDFMRKIKLWWGEDQIPGWEGYKFMTRLKMLKS 269

Query: 121 QQKTWNLDHRKEQNYQEETLLKAIAQEETLHRRE-----------ERDSI---------- 180
           + K W+   ++E    E  L +A A+   L +RE           ERD++          
Sbjct: 270 KLKVWS---KEEFGDVERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQK 329

Query: 181 ------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
                 Q+ K+   + GD NT  F       +KR+ I KL V D G++    + I+  ++
Sbjct: 330 EEVKWRQRGKVKWAREGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVD-ANIEREVI 389

Query: 241 DFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGE--- 300
            F+  LY  +   G      +W  +S  +   L   F L E+  A+   G++K+PG    
Sbjct: 390 RFFKGLYSSNKNVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGF 449

Query: 301 --------WK------------------LNVCVEENFICLIKKKEDAIKVRDFRPISLTA 352
                   W+                  +N    E FICLI KK +++KV D RPISL  
Sbjct: 450 SMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDNRPISLVT 509

[Close]
BLAST of Cucsa.031730 vs. NCBI nr
Match: gi|595838254|ref|XP_007207617.1| (hypothetical protein PRUPE_ppa019748mg, partial [Prunus persica])

HSP 1 Score: 161.4 bits (407), Expect = 2.9e-36
Identity = 123/391 (31.46%), Postives = 189/391 (48.34%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N+FIDD+ L +  LLN  FTWS     A+   LDRF  S  W+++F + +     R++ D
Sbjct: 152 NNFIDDTNLRDPNLLNASFTWSNFRENAVCRKLDRFLFSEAWEDSFPHVKHTALARVTFD 211

Query: 61  HFLILLEAGAFELGPSPFRFCNSWL---FDKQCCQIIENSLSLSNPPEWMDFAPSNKLRS 120
           H  I L+    + GP PFRF N W+   + K+  ++      ++    W  +  S +LR+
Sbjct: 212 HCPIRLDTSNLKWGPGPFRFENMWIDYPYFKKKFKLWWGEDQING---WEGYKFSRRLRT 271

Query: 121 IKDQQKTWN-------LDHRKEQNYQEETL--------LKAIAQEE---------TLHRR 180
           IK + K WN       +  +KE   +   L        L  I ++E          L  +
Sbjct: 272 IKQKIKDWNKEVFGDLVSAKKEAEARIAALDLMEGQGGLDNILRKEREDLYFKVSDLVHK 331

Query: 181 EERDSIQKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
           EE    Q+ K+   + GD NT  F    + ++KR+ I KL V+  G++  S  EI+  I+
Sbjct: 332 EEVKWRQRGKIQWARDGDSNTKFFHRIASGRRKRNFIQKLEVAGDGVV-VSEGEIELEII 391

Query: 241 DFYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGEWKL 300
           +F+ NLY  +  AG      +W+ +S ++ + L   F   E+  A              +
Sbjct: 392 NFFKNLYSSNAEAGWCLEGLNWNAISVEEAEWLERPFEEEEVKRADLMKVMVDFFNCGII 451

Query: 301 NVCVEENFICLIKKKEDAIKVRDFRPISLTALLMKI-----------IIPSIITPSQSAC 352
           N    E FICLI KK+++IKV DFRPISL   L K+           ++ S I+  QSA 
Sbjct: 452 NAITNETFICLIPKKKESIKVSDFRPISLVTSLYKMVSKVLASRLREVLGSTISSYQSAF 511

[Close]
BLAST of Cucsa.031730 vs. NCBI nr
Match: gi|657990185|ref|XP_008387315.1| (PREDICTED: uncharacterized protein LOC103449768 [Malus domestica])

HSP 1 Score: 159.8 bits (403), Expect = 8.5e-36
Identity = 123/419 (29.36%), Postives = 186/419 (44.39%), Query Frame = 1 

Query: 1    NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
            N FI +++L ++ LLN +FTWS      +   LDRF VS   +E F   R     R+ SD
Sbjct: 1163 NDFIRETELKDLELLNAQFTWSNFREEPVCRRLDRFLVSAGCEEIFPEVRQMALARVISD 1222

Query: 61   HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
            H  I LE+   + GPSPFRF N WL   +                W  +    KL++ K 
Sbjct: 1223 HCPIQLESNKVKWGPSPFRFENMWLQHPEFRNKFNLWWQSEQVEGWEGYKFMIKLKAXKK 1282

Query: 121  QQKTWNLDHRKEQNYQEETLLKAIAQEETLHRREERDSI--------------------- 180
            + + W+ +   E    E+   +A A  E L RRE  + +                     
Sbjct: 1283 KVQRWSKESFGE---VEKDFKEAEASLEELDRREGMEGLDVDARRKREELLFXXGDLAYK 1342

Query: 181  ------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKLVSDQGILTTSFSEIKHLILD 240
                  Q+SK+   K GD NT  F    + ++KR+ I +L  + G +    +EI+  I+ 
Sbjct: 1343 EEVKWRQRSKVEWXKEGDGNTKFFHRVASGRRKRNYIERLEXEVGGVIEDANEIEDHIVX 1402

Query: 241  FYSNLYEKSDRAGTFPSTFDWSIVSGDQNKKLTAKFSLLEIVAAINSLGRNKAPGE---- 300
            F+ +L+  ++ A       +W+ +S  +   +   F   E+  A+   G++K+PG     
Sbjct: 1403 FFKSLFSSNEEACWGLEGINWAPISELEANWIERPFEEAEVQRAVFDCGKDKSPGPDGYS 1462

Query: 301  -------WK------------------LNVCVEENFICLIKKKEDAIKVRDFRPISLTAL 352
                   W                   +N    E FICLI KK D++KV DFRPISL   
Sbjct: 1463 LQMIQQCWDILKANIMKIMEEFYETGIINAVTNETFICLIPKKSDSMKVTDFRPISLVTG 1522

[Close]
BLAST of Cucsa.031730 vs. NCBI nr
Match: gi|595882371|ref|XP_007212580.1| (hypothetical protein PRUPE_ppa015871mg, partial [Prunus persica])

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 125/407 (30.71%), Postives = 180/407 (44.23%), Query Frame = 1 

Query: 1   NSFIDDSKLIEVPLLNGKFTWSREGRTALTSLLDRFSVSFNWDEAFANTRVNQQGRISSD 60
           N FI ++ L +  LLN  FTWS     A+   LDRF VS +W+E F + R     RI+SD
Sbjct: 486 NDFIQETNLRDPILLNASFTWSNLRENAVCRRLDRFLVSGSWEEHFPHYRHKALPRITSD 545

Query: 61  HFLILLEAGAFELGPSPFRFCNSWLFDKQCCQIIENSLSLSNPPEWMDFAPSNKLRSIKD 120
           H  I L+    + GPSPFRF N WL      + I+        P W  +    +L+ +K 
Sbjct: 546 HCPIELDTSRVKWGPSPFRFENMWLNHPDFKRKIKLWWGEDQIPGWEGYKFMTRLKMLKS 605

Query: 121 QQKTWNLDHRKEQNYQEETLLKAIAQEETLHRRE-----------ERDSI---------- 180
           + K W+   ++E    E  L +A A+   L +RE           ERD++          
Sbjct: 606 KLKVWS---KEEFGDVERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQK 665

Query: 181 ------QKSKLNLLKLGDENTSLFQPFLATKKKRSLIPKL-VSDQGILTTSFSEIKHLIL 240
                 Q+ K+   + GD NT  F       +KR+ I KL V D G++    + I+  ++
Sbjct: 666 EEVKWRQRGKVKWARDGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVD-ANIEREVI 725

Query: 241 DFYSNLYEKSDRAGTF---------PSTFD-------WSIVSGDQNKKLTAKFSLLEIVA 300
            F+  LY  +     F         P  F        W +V GD  K +   F       
Sbjct: 726 RFFKGLYSSNKNKAVFDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQ------ 785

Query: 301 AINSLGRNKAPGEWKLNVCVEENFICLIKKKEDAIKVRDFRPISLTALLMKII------- 352
                          +N    E FICLI KK +++KV D+RPISL   L K+I       
Sbjct: 786 ------------SGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLASS 845

The following BLAST results are available for this feature:
BLAST of Cucsa.031730 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WPQ5_PRUPE6.3e-3830.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016677mg PE=4 SV=1[more]
M5VS59_PRUPE7.0e-3730.48Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016504mg PE=4 S... [more]
M5W647_PRUPE2.0e-3631.46Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019748mg PE=4 S... [more]
M5WJ76_PRUPE9.4e-3430.71Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015871mg PE=4 S... [more]
M5XHS0_PRUPE1.6e-3330.42Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020085mg PE=4 S... [more]
BLAST of Cucsa.031730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595905097|ref|XP_007214027.1|9.0e-3830.71hypothetical protein PRUPE_ppa016677mg [Prunus persica][more]
gi|595809689|ref|XP_007202950.1|1.0e-3630.48hypothetical protein PRUPE_ppa016504mg, partial [Prunus persica][more]
gi|595838254|ref|XP_007207617.1|2.9e-3631.46hypothetical protein PRUPE_ppa019748mg, partial [Prunus persica][more]
gi|657990185|ref|XP_008387315.1|8.5e-3629.36PREDICTED: uncharacterized protein LOC103449768 [Malus domestica][more]
gi|595882371|ref|XP_007212580.1|1.3e-3330.71hypothetical protein PRUPE_ppa015871mg, partial [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.031730.1Cucsa.031730.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 1..329
score: 2.6
NoneNo IPR availablePANTHERPTHR19446:SF368SUBFAMILY NOT NAMEDcoord: 1..329
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.031730Wax gourdcgywgoB005
Cucsa.031730Cucurbita maxima (Rimu)cgycmaB0005
Cucsa.031730Cucurbita maxima (Rimu)cgycmaB0011
Cucsa.031730Cucurbita moschata (Rifu)cgycmoB0004
Cucsa.031730Cucurbita moschata (Rifu)cgycmoB0010
Cucsa.031730Wild cucumber (PI 183967)cgycpiB003
Cucsa.031730Cucumber (Chinese Long) v2cgycuB003
Cucsa.031730Melon (DHL92) v3.5.1cgymeB003
Cucsa.031730Watermelon (Charleston Gray)cgywcgB004
Cucsa.031730Watermelon (97103) v1cgywmB003
Cucsa.031730Cucurbita pepo (Zucchini)cgycpeB0008
Cucsa.031730Cucurbita pepo (Zucchini)cgycpeB0009
Cucsa.031730Bottle gourd (USVL1VR-Ls)cgylsiB004
Cucsa.031730Melon (DHL92) v3.6.1cgymedB004
Cucsa.031730Silver-seed gourdcarcgyB0552
Cucsa.031730Silver-seed gourdcarcgyB0854
Cucsa.031730Cucumber (Chinese Long) v3cgycucB006
Cucsa.031730Watermelon (97103) v2cgywmbB004