Cucsa.027430 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.027430
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	LINE-1 reverse transcriptase like
Location	scaffold00378 : 154198 .. 158569 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAGATGAAAGGTTCCGATTCACAGTTGGAAGCCAACTCCATTGGGAGGAAACCTGAACAGTCTCTACTTTTAATTAATGAAACTCCTAATGAACACAGCTGTATCCGAAAGAAACTGGGGCCCACGCATAGAAATCAAATTCCAATTAATTTGGCAGCTGTAAATCTAAGTAGAGAGAAAAAGGGTAAATCCCCTTTAATTAATATCATGCAGAATTATGAATTTTCCTCAAAGGTAATTAAAGAAAACAATTTTCCCTCCAACCGACGACAGTTTTCTAATCTGGCCTCCTCTGTTCCTTCTCCTTCAGTTTATGGTTTCTGCAACAAGACTAATTCTTCACAAGGTGACAAATCTCTCCTAGTTCAAGCTCCAAAAATTCTGAAGCACTATTCTCGGAAGCATACTTCTTTTAATAATTTATGGACTGCCTTATTGAAGTCTGAATTGAATGGAGGTTGTGACATAAAAATTCCATTTTCAGCCCCCCTCGGAAGCACAACTTAAAGCCTTCTATTTCAGAAAATAATCCTGGCCTTTTGGAGGTTTGCAGCTCCAAAATTCAGACTTCTAATTGTCTTTCCAGGTCAGTAAACTCATGCTCTCCTATCAAGCATTTCAAATACTCAAAACTCCCCAATATTAACGCTAAGGTTAATTTGTTTCGAGGCTCCCCTTGTCATGCTGCCATTGACAAGCCAACCTCCAAAACCTTGAAGTCTCCATTTAGTGTCAGTAGTGAGGAGTCCTTGGGGTTTCCAAATGGTTTCGATTCGAAGAGTAATGAAGAAATTGAAGGGGCTGACCTATCTTCCCTATTTGATGAAGCAAGTGTTGTTCCAATTAAAGTTCCCTCAGAATTGCCAATGGATCTGTTGCCCTTAGTCAATGATTGTGGCATCATCTTGGTTTAATGAAAGATTGATAAGCCGTCTCCCCTCTCATTCAGCCTAATGAAGATAATCTCTTGGAACACTAGGGGTTTAAATGACATCACAAAAAGAGCAGCATTGAAGATATTCATAAAAAATCATGATCCGGATGTTGTCTTGATACAAGAATGAAAAATGGAAGTCATCAATTCTGTCATTATAAAATCAATATGGAGCTCTAGAGACATCGGCTGGGAATTCGTGGAATCATTAGGTGCCTCCGGAGGAATTTTAACAATGTGGGACAGCAGTATAAATTCTGTAATGCAGGTGATTAAAGGGAGATTTTCCTTGCAATAAAATGTCTCTCCCTAAGTAATCAGATCTTCTGGATCACTAATGTTTATGGACCCTGCAGGTATAGTGAAAAAAAACTGATTTGGCCAGAACTGTTAGCCCTTACATCATGCTCAGCTGAGGCATGGTGTTTAGGTGGAGATTTTAACATTACAAGATGGGCTCATGAAAGATCCCCTTTCGGCAGAAACACAAGAAGCATGCATCATTTTAATAAATTCATTGCAGCAGTTAATCTCACGGAACTACCTCTACAAAATGGGAGGTTCACTTGGTCAAGGGATGGTAGTTCCTCTTCCAGATCATTGCTTAATAGGTTCTTTATAAACAAAGATTGGGATGACCTTCTTGAAAACTCCCAGGTCTCTTGCAAAACCCGCATCTTCTCAGACCATTTCCCCATTTTATTAGAAGCTGGTGCCATCATCTGGGGTCCCTCTCCCTTTCGGTTTTGCAACAGCTGGCTGTTGTCCAATAGGTGCAACCTTTTAATTGAATAAACAGTATCCAACTTCACTCACCATGAATGGGCTGGTTTTATTCTACATGAGCAATGGAGAAAGATAAAGGTGACTGTTAAAATTTGGCATTCCACTACGCAGGCCAAGCTTAAAGAAAAAGAAAAATCTCTCCTTGCGGACGAGTGTGTATTCAGATCAGCATTTGTGACGCTATAGCAGATTCGATAGGCCTAAATGAGGACGAGTGTGTATTCAGATCAGCATTACAAGCAGAATTACTCAGTATTTACCATCTTGAAGAGTGTGTATTCAGATCAGCATTACAAGCAGAATTACTCAGCATTAATTGGCTGTCGGTTGGGGATAAAAATTCTGGGTTTTTCCACCGTTTTCTGAATGCAAAGAAGAGGAAAATTTTAATTTCAGAATTGAAAGATACTAATGGGGTGATGACAACTTCTTCTTGTGATATAGAAAGGATAGTGCTGAGCTTCTTTGGTAGTCTTTATACTAAAATCCCAGGTAATAGATTCATCCCTCTCATCATTGATTGGCCTTGTATCACTCAAGCTCAGAATGCTGCACTAATTTCTCAGTTTCCAACAGAAGAAATATTTTTGGCAGTAAAAGCTCTTGGCAGGAACAAAGCCCCAGGGATCGATGGTTTTACCGTGGAATTCCCCATCAAGCATTGGCCTATTTTCAAAGATTCTTTAGAAGCCTTGTTGAAAGATTTTCACAGCAATGGTAGATTGAACGCTTGTATTGATGAAAATTTCATTTGCCTTGTACACAAAACAGAATTGGCCTTGGAAATGAAAGATTTTCACCCAATCAATCTCACTACCCTATCTTATAAGGTAGTAGCTAAAGTCCTAGCAGAACGGTTAAAATCTGTAATGGACTCAATCATCAGCCCTTACCAAAGTGCTTTTATAGAAGGAAGACAAATACTAGACCCTATATTAAGTGCTAATGAGGCCGTAGAAGATTATAGGGCAAAAAAGAAAAAGGGTTGGATCTTGAAGCTTGACCTTGAGAAGGCCTTTGATTGAGTGGATTGGAACTTCCTTGAGAAGGTTTTACGCCAGAAAAAATTTAGTGCCAAATGGACTGCTTGGATGATGGGTTGCTTAAAGAACCCTAAATTCTTAATATTCATTAATGGGAAACCAAGGGGCCGCATTATAGCTTCAAGAGGCATCCGCCAAGGGGACCCCCTTTCTCCCTTTCTTTTCCTTCTAGTAAGTGAAGTTTTAGTAGCAATCATCAATAATCTTCACTTTAATGGGCAATATGAGGGTTTTCTTGTGGGTAAGGATTCAATCCATCTTCCCCTACTCCAATTTGCTGATGACACCCTACGTTTTTTGCAAGTATGATGATCAAATGTTTCTCAAGTTGAAGGATGCCATTAGACTTTGTGAATGGTGTTCAAGGCAGAAGATTAATTGGAGAAATCAGCTTTAGTGGTGTAAATATAAATGATGATGAATTGTTTCAAACAGCAGCCCGGCTTGGTTGCAAGGCAGAAAAATTATCTATTCTCTACTTGGGTCTACTTAGAGGCTACCCTCAGCGAAGGGAGTTTTGGCAGCCAGTCATTGATAGAATTCATAAGAAATTAGACAGATGGAAGCGCTTTAATATCTCTAGAGGAGGAAGGCAAACTTTATGCAATGCTGTCTTGGCCAGCCTCCCAACTTACTATCTGTCCTTGTTCCTTGTTCCTTGTTCCTTATTCCAGCTCATGTGCCAACTTCATTGGAAAAAATCATGAGGAACTTCTTTTGGGAAGGATTTGCAGGCGGCAAGATCAATCATCTAGTAAAATGGAGCTTGGTTTCCCTTCCTTCAAAAGATGGAGGTCTCGGTCTAGGAGGCATTAAAACCCAAAATTCAGCTTTGTTTGCTAAGTGGGGCTGAGATATTCTAAGGAAGATTCAGCTTTATGGAGGAAAATTATTTGTAGTATCCATGGCAAAGATACATTTGATTGGTTTGCTTTGGGAAAATCTGGAAATAGCCTAAGGAGCCCTTGGGTTAACATTTCTAGAATGTGGAGGCTGGTGGAGCATTTAGCTCACCTTAAGCTTGGCGGTGGCAGCAGAATTGGTTTTTGGACAGATTTCTGGGTCGGTCCCTCTACTCTAAAAGGAACCTTTTCCTTCGCTTTTCAAAATTGCTTTATTACCACAAGGCTCAATTGTTGATCATTGGGATCATTCTACCCTCTCTTGGTCCCTCTCCTTCAGAAGAAGCTTGAAAGAAGAGGAAATAGTAGCCTTTGGTTCCTTATTAGCTCTTCTTGCGCCAGAAAAAGTGTTTGATTTTGATGACTCCAAGGTTTGGTCAATTGGACAGCAAGTTAGATTCAGATTCTCTGTTAAATCTCTCTCAGCCCACTTAAATTCTGCCTCCCCAATGGATAAAAAACTCTTCAAAGCCTTATGGAAATCAAGCTGCCCTCGGCGAGTGAACATTCTGATGCGGATCATGCTTTTCGGGTCCCTAAATTGCGCAGAAATTCTTCAAAAGAAATCCCCAAGCAGATGCCTCCAGCCTTCGGTTTGCCCTCTCTGTATGAATGCTAATGAGTCATTGCTTCATTTCTTCCTACTTTGCCCCTTTTCCTCTGTTTGTTGGAATAGTTTCTTCTCCATCTTTGATATTGCTTGA

mRNA sequence

gagaagatgaaaggttccgattcacagttggaagccaactccattgggaggaaacctgaacagtctctacttttaattaatgaaactcctaatgaacacagctgtatccgaaagaaactggggcccacgcatagaaatcaaattccaattaatttggcagctgtaaatctaagtagagagaaaaagggtaaatcccctttaattaatatcatgcagaattatgaattttcctcaaaggtaattaaagaaaacaattttccctccaaccgacgacagttttctaatctggcctcctctgttccttctccttcagtttatggtttctgcaacaagactaattcttcacaaggtgacaaatctctcctagttcaagctccaaaaattctgaagcactattctcggaagcatacttcttttaataatttatggactgccttattgaagtctgaattgaatggagattcgataggcctaaatgaggacgagtgtgtattcagatcagcattacaagcagaattactcagtatttaccatcttgaagagtgtgtattcagatcagcattacaagcagaattactcagcattaattggctgtcggttggggataaaaattctgggtttttccaccgttttctgaatgcaaagaagaggaaaattttaatttcagaattgaaagatactaatggggtgatgacaacttcttcttgtgatatagaaaggatagtgctgagcttctttggtagtctttatactaaaatcccaggtaatagattcatccctctcatcattgattggccttgtatcactcaagctcagaatgctgcactaatttctcagtttccaacagaagaaatatttttggcagtaaaagctcttggcaggaacaaagccccagggatcgatggttttaccgtggaattccccatcaagcattggcctattttcaaagattctttagaagccttgttgaaagattttcacagcaatggtagattgaacgcttgtattgatgaaaatttcatttgccttgtacacaaaacagaattggccttggaaatgaaagattttcacccaatcaatctcactaccctatcttataaggtagtagctaaagtcctagcagaacggttaaaatctgtaatggactcaatcatcagcccttaccaaagtgcttttatagaaggaagacaaatactagaccctatattaagtgctaatgaggccgtagaagattatagggcaaaaaagaaaaaggtggattggaacttccttgagaaggttttacgccagaaaaaatttagtgccaaatggactgcttggatgatgggttgcttaaagaaccctaaattcttaatattcattaatgggaaaccaaggggccgcattatagcttcaagaggcatccgccaaggggaccccctttctccctttcttttccttctagtaagtgaagttttagtagcaatcatcaataatcttcactttaatgggcaatatgagggttttcttgtgggtaaggattcaatccatcttcccctactccaatttgctgatgacaccctacgcagaagattaattggagaaatcagctttagtggtgtaaatataaatgatgatgaattgtttcaaacagcagcCCGGCTTGGTtgcaaggcagaaaaattatctattctctacttgggtctacttagaggctaccctcagcgaagggagttttggcagccagtcattgatagaattcataagaaattagacagatggaagcgctttaatatctctagaggaggaaggcaaactttatgcaatgctgtcttggccagcctcccaacttactatctgtccttgttccttgttccttgttccttattccagctcatgaacttcttttgggaaggatttgcaggcggcaagatcaatcatctagtaaaatggagcttggtttcccttccttcaaaagatggaggtctcggtctaggaggcattaaaacccaaaattcagctttgtttgctaaaagaagcttgaaagaagaggaaatagtagcctttggttccttattagctcttcttgcgccagaaaaagtgtttgattttgatgactccaaggtttggtcaattggacagcaagttagattcagattctctgttaaatctctctcagcccacttaaattctgcctccccaatggataaaaaactcttcaaagccttatggaaatcaagctgccctcggcgagtgaacattctgatgcggatcatgcttttcgggtccctaaattgcgcagaaattcttcaaaagaaatccccaagcagatgcctccagccttcggtttgccctctctgtatgaatgctaatgagtcattgcttcatttcttcctactttgccccttttcctctgtttgttggaatagtttcttctccatctttgatattgcttga

Coding sequence (CDS)

GAGAAGATGAAAGGTTCCGATTCACAGTTGGAAGCCAACTCCATTGGGAGGAAACCTGAACAGTCTCTACTTTTAATTAATGAAACTCCTAATGAACACAGCTGTATCCGAAAGAAACTGGGGCCCACGCATAGAAATCAAATTCCAATTAATTTGGCAGCTGTAAATCTAAGTAGAGAGAAAAAGGGTAAATCCCCTTTAATTAATATCATGCAGAATTATGAATTTTCCTCAAAGGTAATTAAAGAAAACAATTTTCCCTCCAACCGACGACAGTTTTCTAATCTGGCCTCCTCTGTTCCTTCTCCTTCAGTTTATGGTTTCTGCAACAAGACTAATTCTTCACAAGGTGACAAATCTCTCCTAGTTCAAGCTCCAAAAATTCTGAAGCACTATTCTCGGAAGCATACTTCTTTTAATAATTTATGGACTGCCTTATTGAAGTCTGAATTGAATGGAGATTCGATAGGCCTAAATGAGGACGAGTGTGTATTCAGATCAGCATTACAAGCAGAATTACTCAGTATTTACCATCTTGAAGAGTGTGTATTCAGATCAGCATTACAAGCAGAATTACTCAGCATTAATTGGCTGTCGGTTGGGGATAAAAATTCTGGGTTTTTCCACCGTTTTCTGAATGCAAAGAAGAGGAAAATTTTAATTTCAGAATTGAAAGATACTAATGGGGTGATGACAACTTCTTCTTGTGATATAGAAAGGATAGTGCTGAGCTTCTTTGGTAGTCTTTATACTAAAATCCCAGGTAATAGATTCATCCCTCTCATCATTGATTGGCCTTGTATCACTCAAGCTCAGAATGCTGCACTAATTTCTCAGTTTCCAACAGAAGAAATATTTTTGGCAGTAAAAGCTCTTGGCAGGAACAAAGCCCCAGGGATCGATGGTTTTACCGTGGAATTCCCCATCAAGCATTGGCCTATTTTCAAAGATTCTTTAGAAGCCTTGTTGAAAGATTTTCACAGCAATGGTAGATTGAACGCTTGTATTGATGAAAATTTCATTTGCCTTGTACACAAAACAGAATTGGCCTTGGAAATGAAAGATTTTCACCCAATCAATCTCACTACCCTATCTTATAAGGTAGTAGCTAAAGTCCTAGCAGAACGGTTAAAATCTGTAATGGACTCAATCATCAGCCCTTACCAAAGTGCTTTTATAGAAGGAAGACAAATACTAGACCCTATATTAAGTGCTAATGAGGCCGTAGAAGATTATAGGGCAAAAAAGAAAAAGGTGGATTGGAACTTCCTTGAGAAGGTTTTACGCCAGAAAAAATTTAGTGCCAAATGGACTGCTTGGATGATGGGTTGCTTAAAGAACCCTAAATTCTTAATATTCATTAATGGGAAACCAAGGGGCCGCATTATAGCTTCAAGAGGCATCCGCCAAGGGGACCCCCTTTCTCCCTTTCTTTTCCTTCTAGTAAGTGAAGTTTTAGTAGCAATCATCAATAATCTTCACTTTAATGGGCAATATGAGGGTTTTCTTGTGGGTAAGGATTCAATCCATCTTCCCCTACTCCAATTTGCTGATGACACCCTACGCAGAAGATTAATTGGAGAAATCAGCTTTAGTGGTGTAAATATAAATGATGATGAATTGTTTCAAACAGCAGCCCGGCTTGGTTGCAAGGCAGAAAAATTATCTATTCTCTACTTGGGTCTACTTAGAGGCTACCCTCAGCGAAGGGAGTTTTGGCAGCCAGTCATTGATAGAATTCATAAGAAATTAGACAGATGGAAGCGCTTTAATATCTCTAGAGGAGGAAGGCAAACTTTATGCAATGCTGTCTTGGCCAGCCTCCCAACTTACTATCTGTCCTTGTTCCTTGTTCCTTGTTCCTTATTCCAGCTCATGAACTTCTTTTGGGAAGGATTTGCAGGCGGCAAGATCAATCATCTAGTAAAATGGAGCTTGGTTTCCCTTCCTTCAAAAGATGGAGGTCTCGGTCTAGGAGGCATTAAAACCCAAAATTCAGCTTTGTTTGCTAAAAGAAGCTTGAAAGAAGAGGAAATAGTAGCCTTTGGTTCCTTATTAGCTCTTCTTGCGCCAGAAAAAGTGTTTGATTTTGATGACTCCAAGGTTTGGTCAATTGGACAGCAAGTTAGATTCAGATTCTCTGTTAAATCTCTCTCAGCCCACTTAAATTCTGCCTCCCCAATGGATAAAAAACTCTTCAAAGCCTTATGGAAATCAAGCTGCCCTCGGCGAGTGAACATTCTGATGCGGATCATGCTTTTCGGGTCCCTAAATTGCGCAGAAATTCTTCAAAAGAAATCCCCAAGCAGATGCCTCCAGCCTTCGGTTTGCCCTCTCTGTATGAATGCTAATGAGTCATTGCTTCATTTCTTCCTACTTTGCCCCTTTTCCTCTGTTTGTTGGAATAGTTTCTTCTCCATCTTTGATATTGCTTGA

Protein sequence

EKMKGSDSQLEANSIGRKPEQSLLLINETPNEHSCIRKKLGPTHRNQIPINLAAVNLSREKKGKSPLINIMQNYEFSSKVIKENNFPSNRRQFSNLASSVPSPSVYGFCNKTNSSQGDKSLLVQAPKILKHYSRKHTSFNNLWTALLKSELNGDSIGLNEDECVFRSALQAELLSIYHLEECVFRSALQAELLSINWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIPGNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPIFKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLAERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKKVDWNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTLRRRLIGEISFSGVNINDDELFQTAARLGCKAEKLSILYLGLLRGYPQRREFWQPVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVPCSLFQLMNFFWEGFAGGKINHLVKWSLVSLPSKDGGLGLGGIKTQNSALFAKRSLKEEEIVAFGSLLALLAPEKVFDFDDSKVWSIGQQVRFRFSVKSLSAHLNSASPMDKKLFKALWKSSCPRRVNILMRIMLFGSLNCAEILQKKSPSRCLQPSVCPLCMNANESLLHFFLLCPFSSVCWNSFFSIFDIA*

Homology

[Close]

BLAST of Cucsa.027430 vs. Swiss-Prot
Match: LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 3.4e-24
Identity = 118/441 (26.76%), Postives = 194/441 (43.99%), Query Frame = 1


Query: 129 LKHYSRKHTSFNNLWT---ALLKSELNGDSIGLNEDECVFRSALQAELLSIYHLEECVFR 188
           L+    + T++ NLW    A L+ +L   S    + E    S+L   L ++   E    +
Sbjct: 281 LEFNENEATTYPNLWDTMKAFLRGKLIALSASKKKRETAHTSSLTTHLKALEKKEANSPK 340

Query: 189 SALQAELLS----INWLS-------VGDKNSGFFH----------RFLNAKKRKILISEL 248
            + + E++     IN +        +    S FF           R     + KILI+++
Sbjct: 341 RSRRQEIIKLRGEINQVETRRTIQRINQTRSWFFEKINKIDKPLARLTKGHRDKILINKI 400

Query: 249 KDTNGVMTTSSCDIERIVLSFFGSLY-TKIPGNRFIPLIIDW---PCITQAQNAALISQF 308
           ++  G +TT   +I+  + SF+  LY TK+     +   +D    P + Q Q   L S  
Sbjct: 401 RNEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPI 460

Query: 309 PTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPIFKDSLEALL-KDFHS---NGRLNACI 368
             +EI   + +L   K+PG DGF+ EF    +  FK+ L  +L K FH     G L    
Sbjct: 461 SPKEIEAVINSLPTKKSPGPDGFSAEF----YQTFKEDLIPILHKLFHKIEVEGTLPNSF 520

Query: 369 DENFICLVHKTEL-ALEMKDFHPINLTTLSYKVVAKVLAERLKSVMDSIISPYQSAFIEG 428
            E  I L+ K +    ++++F PI+L  +  K++ K+LA R++  + +II P Q  FI G
Sbjct: 521 YEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPG 580

Query: 429 RQ-------------ILDPILSANEAVEDYRAKKK--KVDWNFLEKVLRQKKFSAKWTAW 488
            Q              ++ +   N  +    A+K   K+   F+ KVL +      +   
Sbjct: 581 MQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNM 640

Query: 489 MMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSEVLVAIINNLHFNGQYE 522
           +      P   I +NG+    I    G RQG PLSP+LF +V EVL   I       + +
Sbjct: 641 IKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQ---QKEIK 700

[Close]

BLAST of Cucsa.027430 vs. Swiss-Prot
Match: LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-23
Identity = 149/616 (24.19%), Postives = 237/616 (38.47%), Query Frame = 1


Query: 135 KHTSFNNLWTALLKSELNGDSIGLN----EDECVFRSALQAELLSIYHLEECVFRSALQA 194
           K T++ NLW A  K+   G  I LN    + E      L ++L  +   E+   +++ + 
Sbjct: 280 KDTTYQNLWDAF-KAVCRGKFIALNAYKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ 339

Query: 195 ELLSIN-----------WLSVGDKNSGFFHRF----------LNAKKRKILISELKDTNG 254
           E+  I               + +  S FF R           +  K+ K  I  +K+  G
Sbjct: 340 EITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDTIKNDKG 399

Query: 255 VMTTSSCDIERIVLSFFGSLYT-KIPGNRFIPLIIDW---PCITQAQNAALISQFPTEEI 314
            +TT   +I+  +  ++  LY  K+     +   +D    P + Q +  +L       EI
Sbjct: 400 DITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPITGSEI 459

Query: 315 FLAVKALGRNKAPGIDGFTVEFPIKHWPIFKDSLEALLKDFHSNGRLNACIDENFICLVH 374
              + +L   K+PG DGFT EF  ++       L  L +     G L     E  I L+ 
Sbjct: 460 VAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIP 519

Query: 375 KTELALEMKD-FHPINLTTLSYKVVAKVLAERLKSVMDSIISPYQSAFIEGRQILDPILS 434
           K       K+ F PI+L  +  K++ K+LA R++  +  +I   Q  FI G Q    I  
Sbjct: 520 KPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRK 579

Query: 435 ANEAVEDY-RAKKK--------------KVDWNFLEKVLRQKKFSAKWTAWMMGCLKNPK 494
           +   ++   RAK K              K+   F+ K L +      +   +      P 
Sbjct: 580 SINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPT 639

Query: 495 FLIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSEVLVAIINNLHFNGQYEGFLVGKDSI 554
             I +NG+         G RQG PLSP LF +V EVL   I       + +G  +GK+ +
Sbjct: 640 ANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ---EKEIKGIQLGKEEV 699

Query: 555 HLPLLQFADDTL------------RRRLIGEIS-FSG--VNINDDELF----------QT 614
            L L  FADD +              +LI   S  SG  +N+   + F          Q 
Sbjct: 700 KLSL--FADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQI 759

Query: 615 AARLGCKAEKLSILYLGLLRGYPQR---REFWQPVIDRIHKKLDRWKRFNISRGGRQTLC 672
              L        I YLG+      +   +E ++P++  I +  ++WK    S  GR  + 
Sbjct: 760 MGELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIV 819

[Close]

BLAST of Cucsa.027430 vs. Swiss-Prot
Match: YTX2_XENLA (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.9e-20
Identity = 94/397 (23.68%), Postives = 171/397 (43.07%), Query Frame = 1


Query: 151 LNGDSIGL------NEDECVFRSALQAELL----SIYHLEECVFRSALQAELLSINWLSV 210
           LNG+ + L      +ED+     ALQ E L    ++ ++E+   R A     + +  L  
Sbjct: 315 LNGEVLDLEQRLSGSEDQ-----ALQCEYLERKEALRNMEQRQARGAFVRSRMQL--LCD 374

Query: 211 GDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP--GNRF 270
            D+ S FF+     K  +  I+ L   +G        I     SF+ +L++  P   +  
Sbjct: 375 MDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDAC 434

Query: 271 IPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPIFKDS 330
             L    P +++ +   L +    +E+  A++ +  NK+PG+DG T+EF    W      
Sbjct: 435 EELWDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPD 494

Query: 331 LEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLAERLK 390
              +L +    G L        + L+ K      +K++ P++L +  YK+VAK ++ RLK
Sbjct: 495 FHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLK 554

Query: 391 SVMDSIISPYQSAFIEGRQILDPILSANEAVE--------------DYRAKKKKVDWNFL 450
           SV+  +I P QS  + GR I D +    + +               D      +VD  +L
Sbjct: 555 SVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYL 614

Query: 451 EKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSE 510
              L+   F  ++  ++     + + L+ IN      +   RG+RQG PLS  L+ L  E
Sbjct: 615 IGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIE 674

Query: 511 VLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL 522
             + ++       +  G ++ +  + + L  +ADD +
Sbjct: 675 PFLCLLRK-----RLTGLVLKEPDMRVVLSAYADDVI 699

[Close]

BLAST of Cucsa.027430 vs. Swiss-Prot
Match: LIN1_NYCCO (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.4e-17
Identity = 125/520 (24.04%), Postives = 209/520 (40.19%), Query Frame = 1


Query: 212 LNAKKR-KILISELKDTNGVMTTSSCDIERIVLSFFGSLYT-KIPGNRFIPLIID---WP 271
           L  KKR K LIS +++ N  +TT   +I++I+  ++  LY+ K    + I   ++    P
Sbjct: 379 LTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLP 438

Query: 272 CITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPIFKDSLEALLKDF 331
            ++Q +   L     + EI   ++ L + K+PG DGFT EF    +  FK+ L  +L + 
Sbjct: 439 RLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEF----YQTFKEELVPILLNL 498

Query: 332 HSNGRLNACIDENF----ICLVHKTELALEMKD-FHPINLTTLSYKVVAKVLAERLKSVM 391
             N      +   F    I L+ K       K+ + PI+L  +  K++ K+L  R++  +
Sbjct: 499 FQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHI 558

Query: 392 DSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK---------------VDWNFLEK 451
             II   Q  FI G Q    I  +   ++     K K               +   F+ +
Sbjct: 559 KKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIR 618

Query: 452 VLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSEVL 511
            L++      +   +      P   I +NG          G RQG PLSP LF +V EVL
Sbjct: 619 TLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVL 678

Query: 512 VAIINNLHFNGQYEGFLVGKDSIHLPLLQFADD------------TLRRRLIGEIS-FSG 571
              I         +G  +G + I L L  FADD            T    +I E S  SG
Sbjct: 679 AIAIRE---EKAIKGIHIGSEEIKLSL--FADDMIVYLENTRDSTTKLLEVIKEYSNVSG 738

Query: 572 VNINDDELFQTAARLGCKAEKL------------SILYLGLLRGYPQR---REFWQPVID 631
             IN  +          +AEK              + YLG+      +   +E ++ +  
Sbjct: 739 YKINTHKSVAFIYTNNNQAEKTVKDSIPFTVVPKKMKYLGVYLTKDVKDLYKENYETLRK 798

Query: 632 RIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLV--PCSLFQ-----LMNFFWE 672
            I + +++WK    S  GR  +    +     Y  +   +  P S F+     +++F W 
Sbjct: 799 EIAEDVNKWKNIPCSWLGRINIVKMSILPKAIYNFNAIPIKAPLSYFKDLEKIILHFIW- 858

[Close]

BLAST of Cucsa.027430 vs. Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.8e-12
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 576 VIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVPCSLFQLMN-----FFW 635
           +++R+  ++  W+   +S  GR TL  AVL+S+P + +S  L+P S+   ++     F W
Sbjct: 16  ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75

Query: 636 EGFAGGKINHLVKWSLVSLPSKDGGLGLGGIKTQNSALFAK 672
              A  K  HLVKWS V  P K+GGLG+   K+ N AL +K
Sbjct: 76  GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISK 116

[Close]

BLAST of Cucsa.027430 vs. TrEMBL
Match: M5WKV4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015607mg PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.2e-97
Identity = 207/522 (39.66%), Postives = 299/522 (57.28%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           + W   GD N+ FFHR  +  +++  I +L+  +  +      IER V+ FF  LY+   
Sbjct: 93  VKWAREGDGNTKFFHRVASGARKRNYIEKLEVEDLGVIEVDAKIEREVIRFFKGLYSSNK 152

Query: 255 GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
              +    ++W  I+Q +   L   F  EE+  AV   G++K+PG DGF++ F    W +
Sbjct: 153 NVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGFSLSFFQSCWEV 212

Query: 315 FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
            K  L  +++DF  +G +N   +E FICL+ K   ++++ D+ PI+L T  YKV++KVLA
Sbjct: 213 VKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLA 272

Query: 375 ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
            RL+ V+ + IS  Q AF++ RQILD +L ANE VE+ R +K+K              V+
Sbjct: 273 SRLREVLGNTISQSQGAFVQKRQILDAVLVANEVVEEVRKQKRKGLVFKIDFEKAYDHVE 332

Query: 435 WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
           WNF++ VL +K F AKW  W++GCL++  F I INGKPRG+  ASRG+RQGDPLSPFLF 
Sbjct: 333 WNFVDDVLARKGFGAKWRGWIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFT 392

Query: 495 LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
           LVS+VL  II          G + G D + +  LQFADDT+                 +L
Sbjct: 393 LVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKEEYWLNLLQLLKL 452

Query: 555 IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
             E+S            G+N + D L   A   GC+     ++YLGL L G P+   FW 
Sbjct: 453 FCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWN 512

Query: 615 PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVP----CSLFQLM-NFF 672
           PV+D++ K+L +WKR  +S+GGR TL  AVL+S+P+YY+SLF +P      + QLM NF 
Sbjct: 513 PVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFL 572

[Close]

BLAST of Cucsa.027430 vs. TrEMBL
Match: M5XHS0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020085mg PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.8e-96
Identity = 206/522 (39.46%), Postives = 299/522 (57.28%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           + W   GD N+ FFHR  +  +++  I +L+  +  +     +IER V+ FF  LY+   
Sbjct: 329 VKWAREGDGNTKFFHRVASGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSSNK 388

Query: 255 GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
              +    ++W  I+Q +   L   F  EE+  AV   G++K+PG DGF++ F    W +
Sbjct: 389 NVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGFSMSFFQSCWEV 448

Query: 315 FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
            K  L  +++DF  +G +N   +E FICL+ K   ++++ D+ PI+L T  YKV++KVL 
Sbjct: 449 VKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLV 508

Query: 375 ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
            RL+ V+ + IS  Q AF++ RQILD +L ANE VE+ R +K+K              V+
Sbjct: 509 SRLREVLGNTISQSQGAFVQKRQILDAVLVANEVVEEVRKQKRKGLVFKIDFEKAYDHVE 568

Query: 435 WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
           WNF++ VL +K F AKW  W++GCL++  F I INGKPRG+  ASRG+RQGDPLSPFLF 
Sbjct: 569 WNFVDDVLVRKGFGAKWRGWIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFT 628

Query: 495 LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
           LVS+VL  II          G + G D + +  LQFADDT+                 +L
Sbjct: 629 LVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKEEYWLNLLQLLKL 688

Query: 555 IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
             E+S            G+N + D L   A   GC+     ++YLGL L G P+   FW 
Sbjct: 689 FCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWN 748

Query: 615 PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVP----CSLFQLM-NFF 672
           PV+D++ K+L +WKR  +S+GGR TL  AVL+S+P+YY+SLF +P      + QLM NF 
Sbjct: 749 PVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFL 808

[Close]

BLAST of Cucsa.027430 vs. TrEMBL
Match: A5BV95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026478 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.9e-96
Identity = 215/573 (37.52%), Postives = 307/573 (53.58%), Query Frame = 1


Query: 144  TALLKSELNGDSIGLNEDECVFRSALQAELLSIYHLEECVFRSALQAELLSINWLSVGDK 203
            T L + +L      LN D  + R+  + EL  +   EE  +R   +     + W+  GD 
Sbjct: 927  TDLSRIDLIEQEGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSR-----VKWIKEGDC 986

Query: 204  NSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIPGNRFIPLII 263
            NS FFHR    ++ +  I  L    G    +  DI   +++FFG+LY+K  G  +    I
Sbjct: 987  NSKFFHRVATGRRSRKFIKSLISERGETLNNIEDISEEIVNFFGNLYSKPVGESWRXEGI 1046

Query: 264  DWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPIFKDSLEALL 323
            DW  I+      L   F  EE+  AV  L + KAPG DGFT+    + W + K+ L  + 
Sbjct: 1047 DWVPISGESGGWLDRPFTEEEVRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVF 1106

Query: 324  KDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLAERLKSVMDS 383
             +FH+NG +N   +  FI LV K   ++++ D+ PI+L T  YK++AKVL+ RL+ V+  
Sbjct: 1107 LEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHE 1166

Query: 384  IISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VDWNFLEKVLR 443
             IS  Q AF+EGR ILD +L ANE V++ R   ++              VDW FL+ VL+
Sbjct: 1167 TISDSQGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQ 1226

Query: 444  QKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSEVLVAI 503
            +K FS KW  W+ GCL +  F I +NG  +G + ASRG+RQGDPLSPFLF LV++VL  +
Sbjct: 1227 RKGFSQKWRLWIRGCLSSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRM 1286

Query: 504  INNLHFNGQYEGFLVGKDSIHLPLLQFADDT-------------LRRRLIGEISFSGVNI 563
            +      G  EGF VG+D   + LLQFADDT             L+  L+     SG+ I
Sbjct: 1287 LFRAEETGLTEGFSVGRDRTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSGLKI 1346

Query: 564  N------------DDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQPVIDRIHKK 623
            N             + L   A+   C+  +  + YLGL L G P+   FW PV++RI ++
Sbjct: 1347 NLEKSTISGINTRQELLSSLASVFDCRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRR 1406

Query: 624  LDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVPCSLFQLM-----NFFWEGFAGGKI 672
            LD WK+  +S GGR TL  + L+ +P+Y+LSLF +P S+   +     NF W G   GK 
Sbjct: 1407 LDGWKKAYLSLGGRITLIQSCLSHIPSYFLSLFKIPASIASKIEKMQRNFLWSGAGEGKK 1466

[Close]

BLAST of Cucsa.027430 vs. TrEMBL
Match: M5VS59_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016504mg PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95
Identity = 205/522 (39.27%), Postives = 298/522 (57.09%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           + W   GD N+ FFHR  N  +++  I +L+  +  +     +IER V+ FF  LY+   
Sbjct: 337 VKWAREGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSSNK 396

Query: 255 GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
              +    ++W  I+Q +   L   F  EE+  AV   G++K+PG DGF++ F    W +
Sbjct: 397 NVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGFSMSFFQSCWEV 456

Query: 315 FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
            K  L  +++DF  +G +N   +E FICL+ K   ++++ D  PI+L T  YKV++KVLA
Sbjct: 457 VKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDNRPISLVTSLYKVISKVLA 516

Query: 375 ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
            RL+ V+ + IS  Q AF++ RQILD +L ANE VE+ R +K+K              V+
Sbjct: 517 SRLREVLGNTISQSQGAFVQKRQILDAVLVANEVVEEVRKQKRKGLVFKIDFEKAYDHVE 576

Query: 435 WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
           WNF++ VL +K F  KW  W++GCL++  F I INGKPRG+  ASRG+RQGDPLSPFLF 
Sbjct: 577 WNFVDDVLARKGFGVKWRGWIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFT 636

Query: 495 LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
           LVS+VL  II          G + G D + +  LQFADDT+                 +L
Sbjct: 637 LVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKEEYWLNLLQLLKL 696

Query: 555 IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
             ++S            G+N + + L   A   GC+     ++YLGL L G P+   FW 
Sbjct: 697 FCDVSGMKINKAKSCILGINFSTEALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWN 756

Query: 615 PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVP----CSLFQLM-NFF 672
           PV+D++ K+L +WKR  +S+GGR TL  AVL+S+P+YY+SLF +P      + QLM NF 
Sbjct: 757 PVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFL 816

[Close]

BLAST of Cucsa.027430 vs. TrEMBL
Match: M5X4S0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021750mg PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.4e-95
Identity = 202/522 (38.70%), Postives = 299/522 (57.28%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           + W   GD N+ FFHR  N  +++  I +L+  +  +     +IER V+ FF  LY+   
Sbjct: 86  VKWAREGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSSNK 145

Query: 255 GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
              +    ++W  I+Q +   L   F  EE+  AV   G++K+PG DGF++ F    W +
Sbjct: 146 NVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFDCGKDKSPGPDGFSMSFFQSCWEV 205

Query: 315 FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
            K  L  +++DF  +G +N   +E FICL+ K   ++++ D+ PI+L T  YKV++KVLA
Sbjct: 206 VKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLA 265

Query: 375 ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
            RL+ V+ + IS  Q AF++ RQILD +L ANE VE+ R +K+K              V+
Sbjct: 266 SRLREVLGNTISQSQGAFVQKRQILDAVLVANEVVEEVRKQKRKGLVFKIDFEKAYDHVE 325

Query: 435 WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
           WNF++ V+ +K F  KW  W++GCL++  F I INGKPRG+  ASRG+RQGDPLSPFLF 
Sbjct: 326 WNFVDDVMARKGFGVKWRGWIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFT 385

Query: 495 LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
           LVS+VL  +I          G + G D + +  LQFADDT+                 +L
Sbjct: 386 LVSDVLSRLIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKEEYWLNLLQLLKL 445

Query: 555 IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
             ++S            G+N + + L   A   GC+     ++YLGL L G P+   FW 
Sbjct: 446 FCDVSGMKINKAKSCILGINFSTEVLNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWN 505

Query: 615 PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVPCSLF----QLM-NFF 672
           PV++++ K+L +WKR  +S+GGR TL  AVL+S+P+YY+SLF +P  +     QLM NF 
Sbjct: 506 PVMEKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFL 565

[Close]

BLAST of Cucsa.027430 vs. TAIR10
Match: AT1G43760.1 (AT1G43760.1 DNAse I-like superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-15
Identity = 57/184 (30.98%), Postives = 91/184 (49.46%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           I WL  GD N+ FFH+ + A + K LI  L+  + V   +   ++ +++++    YT + 
Sbjct: 441 IKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY----YTHLL 500

Query: 255 GNRFIPLIID--------WPCITQAQNAALISQFPTE-EIFLAVKALGRNKAPGIDGFTV 314
           G+    L  D         P       A+ +S  P++ EI  AV A+ RNKAPG D FT 
Sbjct: 501 GSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTA 560

Query: 315 EFPIKHWPIFKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLS 370
           EF  + W + KDS  A +K+F   G L    +   I L+ K     ++  F P++  T+ 
Sbjct: 561 EFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVV 620

[Close]

BLAST of Cucsa.027430 vs. TAIR10
Match: ATMG01250.1 (ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase))

HSP 1 Score: 67.8 bits (164), Expect = 3.6e-11
Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 1


Query: 451 LIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSEVLVAIINNLHFNGQYEGFLVGKDSIH 510
           L  ING P+G +  SRG+RQGDPLSP+LF+L +EVL  +       G+  G  V  +S  
Sbjct: 11  LFIINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPR 70

Query: 511 LPLLQFADDTLRRRLI 527
           +  L FADDT   R I
Sbjct: 71  INHLLFADDTSSARWI 86

[Close]

BLAST of Cucsa.027430 vs. TAIR10
Match: AT3G24255.1 (AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-07
Identity = 34/121 (28.10%), Postives = 59/121 (48.76%), Query Frame = 1


Query: 555 LSILYLGL-LRGYPQRREFWQPVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYL 614
           L + YLGL L         + P++++I  ++ +W   ++S  GR  L ++V+ SL  +++
Sbjct: 23  LPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWM 82

Query: 615 SLFLVPCSLFQLMN-----FFWEGFAGGKINHLVKWSLVSLPSKDGGLGLGGIKTQNSAL 670
           S F +P +  + ++     F W G         V WS V  P  +GGLG+  +K  N   
Sbjct: 83  SAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKGS 142

[Close]

BLAST of Cucsa.027430 vs. NCBI nr
Match: gi|595831294|ref|XP_007206246.1| (hypothetical protein PRUPE_ppa015607mg, partial [Prunus persica])

HSP 1 Score: 363.6 bits (932), Expect = 8.9e-97
Identity = 207/522 (39.66%), Postives = 299/522 (57.28%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           + W   GD N+ FFHR  +  +++  I +L+  +  +      IER V+ FF  LY+   
Sbjct: 93  VKWAREGDGNTKFFHRVASGARKRNYIEKLEVEDLGVIEVDAKIEREVIRFFKGLYSSNK 152

Query: 255 GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
              +    ++W  I+Q +   L   F  EE+  AV   G++K+PG DGF++ F    W +
Sbjct: 153 NVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGFSLSFFQSCWEV 212

Query: 315 FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
            K  L  +++DF  +G +N   +E FICL+ K   ++++ D+ PI+L T  YKV++KVLA
Sbjct: 213 VKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLA 272

Query: 375 ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
            RL+ V+ + IS  Q AF++ RQILD +L ANE VE+ R +K+K              V+
Sbjct: 273 SRLREVLGNTISQSQGAFVQKRQILDAVLVANEVVEEVRKQKRKGLVFKIDFEKAYDHVE 332

Query: 435 WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
           WNF++ VL +K F AKW  W++GCL++  F I INGKPRG+  ASRG+RQGDPLSPFLF 
Sbjct: 333 WNFVDDVLARKGFGAKWRGWIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFT 392

Query: 495 LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
           LVS+VL  II          G + G D + +  LQFADDT+                 +L
Sbjct: 393 LVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKEEYWLNLLQLLKL 452

Query: 555 IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
             E+S            G+N + D L   A   GC+     ++YLGL L G P+   FW 
Sbjct: 453 FCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWN 512

Query: 615 PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVP----CSLFQLM-NFF 672
           PV+D++ K+L +WKR  +S+GGR TL  AVL+S+P+YY+SLF +P      + QLM NF 
Sbjct: 513 PVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFL 572

[Close]

BLAST of Cucsa.027430 vs. NCBI nr
Match: gi|596230697|ref|XP_007224290.1| (hypothetical protein PRUPE_ppa020085mg, partial [Prunus persica])

HSP 1 Score: 362.1 bits (928), Expect = 2.6e-96
Identity = 206/522 (39.46%), Postives = 299/522 (57.28%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           + W   GD N+ FFHR  +  +++  I +L+  +  +     +IER V+ FF  LY+   
Sbjct: 329 VKWAREGDGNTKFFHRVASGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSSNK 388

Query: 255 GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
              +    ++W  I+Q +   L   F  EE+  AV   G++K+PG DGF++ F    W +
Sbjct: 389 NVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGFSMSFFQSCWEV 448

Query: 315 FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
            K  L  +++DF  +G +N   +E FICL+ K   ++++ D+ PI+L T  YKV++KVL 
Sbjct: 449 VKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLV 508

Query: 375 ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
            RL+ V+ + IS  Q AF++ RQILD +L ANE VE+ R +K+K              V+
Sbjct: 509 SRLREVLGNTISQSQGAFVQKRQILDAVLVANEVVEEVRKQKRKGLVFKIDFEKAYDHVE 568

Query: 435 WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
           WNF++ VL +K F AKW  W++GCL++  F I INGKPRG+  ASRG+RQGDPLSPFLF 
Sbjct: 569 WNFVDDVLVRKGFGAKWRGWIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFT 628

Query: 495 LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
           LVS+VL  II          G + G D + +  LQFADDT+                 +L
Sbjct: 629 LVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKEEYWLNLLQLLKL 688

Query: 555 IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
             E+S            G+N + D L   A   GC+     ++YLGL L G P+   FW 
Sbjct: 689 FCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWN 748

Query: 615 PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVP----CSLFQLM-NFF 672
           PV+D++ K+L +WKR  +S+GGR TL  AVL+S+P+YY+SLF +P      + QLM NF 
Sbjct: 749 PVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFL 808

[Close]

BLAST of Cucsa.027430 vs. NCBI nr
Match: gi|147784237|emb|CAN75040.1| (hypothetical protein VITISV_026478 [Vitis vinifera])

HSP 1 Score: 359.8 bits (922), Expect = 1.3e-95
Identity = 215/573 (37.52%), Postives = 307/573 (53.58%), Query Frame = 1


Query: 144  TALLKSELNGDSIGLNEDECVFRSALQAELLSIYHLEECVFRSALQAELLSINWLSVGDK 203
            T L + +L      LN D  + R+  + EL  +   EE  +R   +     + W+  GD 
Sbjct: 927  TDLSRIDLIEQEGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSR-----VKWIKEGDC 986

Query: 204  NSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIPGNRFIPLII 263
            NS FFHR    ++ +  I  L    G    +  DI   +++FFG+LY+K  G  +    I
Sbjct: 987  NSKFFHRVATGRRSRKFIKSLISERGETLNNIEDISEEIVNFFGNLYSKPVGESWRXEGI 1046

Query: 264  DWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPIFKDSLEALL 323
            DW  I+      L   F  EE+  AV  L + KAPG DGFT+    + W + K+ L  + 
Sbjct: 1047 DWVPISGESGGWLDRPFTEEEVRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVF 1106

Query: 324  KDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLAERLKSVMDS 383
             +FH+NG +N   +  FI LV K   ++++ D+ PI+L T  YK++AKVL+ RL+ V+  
Sbjct: 1107 LEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHE 1166

Query: 384  IISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VDWNFLEKVLR 443
             IS  Q AF+EGR ILD +L ANE V++ R   ++              VDW FL+ VL+
Sbjct: 1167 TISDSQGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQ 1226

Query: 444  QKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFLLVSEVLVAI 503
            +K FS KW  W+ GCL +  F I +NG  +G + ASRG+RQGDPLSPFLF LV++VL  +
Sbjct: 1227 RKGFSQKWRLWIRGCLSSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRM 1286

Query: 504  INNLHFNGQYEGFLVGKDSIHLPLLQFADDT-------------LRRRLIGEISFSGVNI 563
            +      G  EGF VG+D   + LLQFADDT             L+  L+     SG+ I
Sbjct: 1287 LFRAEETGLTEGFSVGRDRTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSGLKI 1346

Query: 564  N------------DDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQPVIDRIHKK 623
            N             + L   A+   C+  +  + YLGL L G P+   FW PV++RI ++
Sbjct: 1347 NLEKSTISGINTRQELLSSLASVFDCRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRR 1406

Query: 624  LDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVPCSLFQLM-----NFFWEGFAGGKI 672
            LD WK+  +S GGR TL  + L+ +P+Y+LSLF +P S+   +     NF W G   GK 
Sbjct: 1407 LDGWKKAYLSLGGRITLIQSCLSHIPSYFLSLFKIPASIASKIEKMQRNFLWSGAGEGKK 1466

[Close]

BLAST of Cucsa.027430 vs. NCBI nr
Match: gi|658030603|ref|XP_008350747.1| (PREDICTED: uncharacterized protein LOC103414113 [Malus domestica])

HSP 1 Score: 359.8 bits (922), Expect = 1.3e-95
Identity = 196/522 (37.55%), Postives = 301/522 (57.66%), Query Frame = 1


Query: 195  INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
            + W   GD N+ FFHR  + ++++  I  L+   G +   + +IE  ++ FF SL++   
Sbjct: 899  VEWXKEGDGNTKFFHRVASGRRKRNYIERLEXEVGGVIEDANEIEDHIVXFFKSLFSSNE 958

Query: 255  GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
               +    I+W  I++ +   +   F   E+  AV   G++K+PG DG++++   + W I
Sbjct: 959  EACWGLEGINWAPISELEANWIERPFEEAEVQRAVFDCGKDKSPGPDGYSLQMIQQCWDI 1018

Query: 315  FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
             K ++  ++++F+  G +NA  +E FICL+ K   ++++ DF PI+L T  YK++AK LA
Sbjct: 1019 LKXNIMKIMEEFYETGIINAVTNETFICLIPKKSDSMKVTDFRPISLVTGLYKIMAKTLA 1078

Query: 375  ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
             RLK V+ S IS  Q AF++ RQILD +L ANE VE+ R KK++              V+
Sbjct: 1079 SRLKEVLGSTISQNQGAFVKDRQILDAVLIANEVVEEVRQKKEEGLVLKIDFEKAYDHVE 1138

Query: 435  WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
            W FL++VL++K F  +W  WM GCL +  F + ING+PRG+  ASRG+RQGDPLSPFLF 
Sbjct: 1139 WRFLDEVLQRKSFGNRWRKWMQGCLSSANFSVLINGRPRGKFQASRGLRQGDPLSPFLFT 1198

Query: 495  LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
            LV +VL  ++     N   +G  +G++ + +  LQFADDT+                 +L
Sbjct: 1199 LVVDVLSRLMEKAQENHLIKGLCIGQEKVEIXHLQFADDTIFFLAEDEGGWNNLLELLKL 1258

Query: 555  IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
               +S           +G+N + ++L + A   GC+     I YLGL L G P+  +FW 
Sbjct: 1259 FCSVSGLKINKAKCYLAGINSDCEKLNRLADSWGCEVGSWPIKYLGLPLGGRPRALKFWD 1318

Query: 615  PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVPCSLF-----QLMNFF 672
            PV+D++ K+L  WK+  +SRGGR TL  +VL SLPTYY+SLF +PC +       +  F 
Sbjct: 1319 PVVDKMEKRLQSWKKAFLSRGGRLTLIQSVLGSLPTYYMSLFKMPCGVIGRLEKLMKGFL 1378

[Close]

BLAST of Cucsa.027430 vs. NCBI nr
Match: gi|658030603|ref|XP_008350747.1| (PREDICTED: uncharacterized protein LOC103414113 [Malus domestica])

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-06
Identity = 41/137 (29.93%), Postives = 66/137 (48.18%), Query Frame = 1


Query: 671  KRSLKEEEIVAFGSLLALLAPEKVFDFD-DSKVWSIGQQVRFRFSVKSLSAHLNSASPMD 730
            +R+L E EI     LL  +   ++     D++ W +  +    F+ KS  + L++   M 
Sbjct: 1535 RRNLNEAEIEEAARLLQKVEEVRLSQSRMDNRRWKM--EASGLFTCKSYCSFLSNNGMMQ 1594

Query: 731  K-KLFKALWKSSCPRRVNILMRIMLFGSLNCAEILQKKSPSRCLQPSVCPLCMNANESLL 790
              +    +WKS  P +V IL+ +   G LN  + +Q++SP  CL P  C LC    ES+ 
Sbjct: 1595 YFQPHSQIWKSKVPPKVKILVWLAAKGKLNTCDQIQRRSPFICLSPQWCSLCKAKEESVN 1654

Query: 791  HFFLLCPFSSVCWNSFF 806
            H FL C ++   W   F
Sbjct: 1655 HIFLHCSYTIQLWWKLF 1669

HSP 2 Score: 359.4 bits (921), Expect = 1.7e-95
Identity = 205/522 (39.27%), Postives = 298/522 (57.09%), Query Frame = 1


Query: 195 INWLSVGDKNSGFFHRFLNAKKRKILISELKDTNGVMTTSSCDIERIVLSFFGSLYTKIP 254
           + W   GD N+ FFHR  N  +++  I +L+  +  +     +IER V+ FF  LY+   
Sbjct: 337 VKWAREGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSSNK 396

Query: 255 GNRFIPLIIDWPCITQAQNAALISQFPTEEIFLAVKALGRNKAPGIDGFTVEFPIKHWPI 314
              +    ++W  I+Q +   L   F  EE+  AV   G++K+PG DGF++ F    W +
Sbjct: 397 NVGWGVEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGFSMSFFQSCWEV 456

Query: 315 FKDSLEALLKDFHSNGRLNACIDENFICLVHKTELALEMKDFHPINLTTLSYKVVAKVLA 374
            K  L  +++DF  +G +N   +E FICL+ K   ++++ D  PI+L T  YKV++KVLA
Sbjct: 457 VKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDNRPISLVTSLYKVISKVLA 516

Query: 375 ERLKSVMDSIISPYQSAFIEGRQILDPILSANEAVEDYRAKKKK--------------VD 434
            RL+ V+ + IS  Q AF++ RQILD +L ANE VE+ R +K+K              V+
Sbjct: 517 SRLREVLGNTISQSQGAFVQKRQILDAVLVANEVVEEVRKQKRKGLVFKIDFEKAYDHVE 576

Query: 435 WNFLEKVLRQKKFSAKWTAWMMGCLKNPKFLIFINGKPRGRIIASRGIRQGDPLSPFLFL 494
           WNF++ VL +K F  KW  W++GCL++  F I INGKPRG+  ASRG+RQGDPLSPFLF 
Sbjct: 577 WNFVDDVLARKGFGVKWRGWIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFT 636

Query: 495 LVSEVLVAIINNLHFNGQYEGFLVGKDSIHLPLLQFADDTL---------------RRRL 554
           LVS+VL  II          G + G D + +  LQFADDT+                 +L
Sbjct: 637 LVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQFADDTIFLLDGKEEYWLNLLQLLKL 696

Query: 555 IGEIS----------FSGVNINDDELFQTAARLGCKAEKLSILYLGL-LRGYPQRREFWQ 614
             ++S            G+N + + L   A   GC+     ++YLGL L G P+   FW 
Sbjct: 697 FCDVSGMKINKAKSCILGINFSTEALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWN 756

Query: 615 PVIDRIHKKLDRWKRFNISRGGRQTLCNAVLASLPTYYLSLFLVP----CSLFQLM-NFF 672
           PV+D++ K+L +WKR  +S+GGR TL  AVL+S+P+YY+SLF +P      + QLM NF 
Sbjct: 757 PVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFL 816

The following BLAST results are available for this feature:

BLAST of Cucsa.027430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LORF2_MOUSE	3.4e-24	26.76	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2	[more]
LORF2_HUMAN	2.9e-23	24.19	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1	[more]
YTX2_XENLA	3.9e-20	23.68	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1	[more]
LIN1_NYCCO	2.4e-17	24.04	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1	[more]
RNHX1_ARATH	1.8e-12	37.62	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 P...	[more]

BLAST of Cucsa.027430 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WKV4_PRUPE	6.2e-97	39.66	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015607mg PE=4 S...	[more]
M5XHS0_PRUPE	1.8e-96	39.46	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020085mg PE=4 S...	[more]
A5BV95_VITVI	8.9e-96	37.52	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026478 PE=4 SV=1	[more]
M5VS59_PRUPE	1.2e-95	39.27	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016504mg PE=4 S...	[more]
M5X4S0_PRUPE	3.4e-95	38.70	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021750mg PE=4 S...	[more]

BLAST of Cucsa.027430 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G43760.1	2.4e-15	30.98	DNAse I-like superfamily protein	[more]
ATMG01250.1	3.6e-11	46.05	ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)	[more]
AT3G24255.1	1.4e-07	28.10	RNA-directed DNA polymerase (reverse transcriptase)-related family p...	[more]

BLAST of Cucsa.027430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|595831294\|ref\|XP_007206246.1\|	8.9e-97	39.66	hypothetical protein PRUPE_ppa015607mg, partial [Prunus persica]	[more]
gi\|596230697\|ref\|XP_007224290.1\|	2.6e-96	39.46	hypothetical protein PRUPE_ppa020085mg, partial [Prunus persica]	[more]
gi\|147784237\|emb\|CAN75040.1\|	1.3e-95	37.52	hypothetical protein VITISV_026478 [Vitis vinifera]	[more]
gi\|658030603\|ref\|XP_008350747.1\|	1.3e-95	37.55	PREDICTED: uncharacterized protein LOC103414113 [Malus domestica]	[more]
gi\|658030603\|ref\|XP_008350747.1\|	3.2e-06	29.93	PREDICTED: uncharacterized protein LOC103414113 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom
IPR026960	RVT-Znf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.027430.1	Cucsa.027430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 346..521 score: 5.4
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 713..801 score: 1.1
None	No IPR available	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 158..596 score: 8.9
None	No IPR available	PANTHER	PTHR19446:SF368	SUBFAMILY NOT NAMED	coord: 158..596 score: 8.9
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 289..494 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.027430	Melon (DHL92) v3.6.1	cgymedB646
Cucsa.027430	Cucumber (Chinese Long) v3	cgycucB603
Cucsa.027430	Cucurbita maxima (Rimu)	cgycmaB1099
Cucsa.027430	Cucurbita moschata (Rifu)	cgycmoB1098
Cucsa.027430	Wild cucumber (PI 183967)	cgycpiB584
Cucsa.027430	Cucumber (Chinese Long) v2	cgycuB555
Cucsa.027430	Melon (DHL92) v3.5.1	cgymeB651
Cucsa.027430	Watermelon (97103) v1	cgywmB713