Cucsa.022830 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.022830
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCysteine-rich receptor-like protein kinase 25
Locationscaffold00320 : 70175 .. 70399 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCTCAACTCTCAATTGGCTACCTTTAAGACAATCATTGGGAGTAAGAAAGATTGGGTAGTATATGGATTCAATTGCTTTATGTGGTATCGTGATCATCAGTTTTACTTCAAATTTTCAACAAGTGCATGTGAGTTCAGATTTTGTGCTTTTAGTTGTTTGCAAGATCACAACATAAAAAAAGTTTCTTGTTTTAATGCAGGTGGAAGATGGTCTTTTCCTTGA

mRNA sequence

TGTCTCAACTCTCAATTGGCTACCTTTAAGACAATCATTGGGAGTAAGAAAGATTGGGTAGTATATGGATTCAATTGCTTTATGTGGTATCGTGATCATCAGTTTTACTTCAAATTTTCAACAAGTGGAAGATGGTCTTTTCCTTGA

Coding sequence (CDS)

TGTCTCAACTCTCAATTGGCTACCTTTAAGACAATCATTGGGAGTAAGAAAGATTGGGTAGTATATGGATTCAATTGCTTTATGTGGTATCGTGATCATCAGTTTTACTTCAAATTTTCAACAAGTGGAAGATGGTCTTTTCCTTGA

Protein sequence

CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFSTSGRWSFP*
Homology
[Close]
BLAST of Cucsa.022830 vs. TrEMBL
Match: A0A0A0LUB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065400 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.2e-15
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFSTS 43
           CLNSQLATF+T IGSKKDW +YGFNCFMWY DHQFYF FSTS
Sbjct: 210 CLNSQLATFRTTIGSKKDWEIYGFNCFMWYHDHQFYFNFSTS 251

[Close]
BLAST of Cucsa.022830 vs. TrEMBL
Match: V7BQQ4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G196800g PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-08
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFST--SGRW 46
           CL++QL TF+T+IG+K+ W +YG NCFMWY D+QFY   ST  S  W
Sbjct: 207 CLDAQLVTFRTVIGNKRRWEIYGSNCFMWYNDYQFYSNGSTLLSAAW 253

[Close]
BLAST of Cucsa.022830 vs. TrEMBL
Match: A0A0S3S2A6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G029800 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-08
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFST--SGRW 46
           CL++QL TF+T+IG+K+ W +YG NCFMWY D+QFY   ST  S  W
Sbjct: 207 CLDAQLLTFRTVIGNKRRWEIYGSNCFMWYNDYQFYSNGSTLLSAAW 253

[Close]
BLAST of Cucsa.022830 vs. TrEMBL
Match: A0A0L9VFV7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g255200 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-08
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFST 42
           CL++QL TF+T+IG+K+ W +YG NCFMWY D+QFY   ST
Sbjct: 239 CLDAQLLTFRTVIGNKRRWEIYGSNCFMWYNDYQFYSNGST 279

[Close]
BLAST of Cucsa.022830 vs. TrEMBL
Match: I1M2H5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G251500 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.6e-08
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFST--SGRW 46
           CL+SQL  F+T+IG+K+ W +YG NCFMWY D+QFY   ST  S  W
Sbjct: 210 CLDSQLENFRTVIGNKRRWEIYGSNCFMWYNDYQFYSNGSTLLSAAW 256

[Close]
BLAST of Cucsa.022830 vs. NCBI nr
Match: gi|778658530|ref|XP_011652874.1| (PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 7.2e-18
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFSTS--GRWSFP 49
           CLNSQLATF+T IGSKKDW +YGFNCFMWY DHQFYF FSTS  GRWSFP
Sbjct: 210 CLNSQLATFRTTIGSKKDWEIYGFNCFMWYHDHQFYFNFSTSAGGRWSFP 259

[Close]
BLAST of Cucsa.022830 vs. NCBI nr
Match: gi|659067839|ref|XP_008441555.1| (PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-17
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFSTS--GRWSFP 49
           CLNSQLATF+T IGSKKDW +YGFNCFMWY DH FYF FSTS  GRWSFP
Sbjct: 211 CLNSQLATFRTTIGSKKDWEIYGFNCFMWYHDHPFYFNFSTSAGGRWSFP 260

[Close]
BLAST of Cucsa.022830 vs. NCBI nr
Match: gi|700209473|gb|KGN64569.1| (hypothetical protein Csa_1G065400 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 7.4e-15
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFSTS 43
           CLNSQLATF+T IGSKKDW +YGFNCFMWY DHQFYF FSTS
Sbjct: 210 CLNSQLATFRTTIGSKKDWEIYGFNCFMWYHDHQFYFNFSTS 251

[Close]
BLAST of Cucsa.022830 vs. NCBI nr
Match: gi|593695603|ref|XP_007148300.1| (hypothetical protein PHAVU_006G196800g [Phaseolus vulgaris])

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-08
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFST--SGRW 46
           CL++QL TF+T+IG+K+ W +YG NCFMWY D+QFY   ST  S  W
Sbjct: 207 CLDAQLVTFRTVIGNKRRWEIYGSNCFMWYNDYQFYSNGSTLLSAAW 253

[Close]
BLAST of Cucsa.022830 vs. NCBI nr
Match: gi|951042847|ref|XP_014518245.1| (PREDICTED: putative cysteine-rich receptor-like protein kinase 9 [Vigna radiata var. radiata])

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-08
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1 

Query: 1   CLNSQLATFKTIIGSKKDWVVYGFNCFMWYRDHQFYFKFST--SGRW 46
           CL++QL TF+T+IG+K+ W +YG NCFMWY D+QFY   ST  S  W
Sbjct: 207 CLDAQLLTFRTVIGNKRRWEIYGSNCFMWYNDYQFYSNGSTLLSAAW 253

The following BLAST results are available for this feature:
BLAST of Cucsa.022830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUB6_CUCSA5.2e-1585.71Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065400 PE=4 SV=1[more]
V7BQQ4_PHAVU1.6e-0857.45Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G196800g PE=4 SV=1[more]
A0A0S3S2A6_PHAAN2.1e-0857.45Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G029800 PE=... [more]
A0A0L9VFV7_PHAAN2.7e-0860.98Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g255200 PE=4 SV=1[more]
I1M2H5_SOYBN3.6e-0857.45Uncharacterized protein OS=Glycine max GN=GLYMA_13G251500 PE=4 SV=1[more]
BLAST of Cucsa.022830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658530|ref|XP_011652874.1|7.2e-1884.00PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis sativus][more]
gi|659067839|ref|XP_008441555.1|3.6e-1782.00PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis melo][more]
gi|700209473|gb|KGN64569.1|7.4e-1585.71hypothetical protein Csa_1G065400 [Cucumis sativus][more]
gi|593695603|ref|XP_007148300.1|2.3e-0857.45hypothetical protein PHAVU_006G196800g [Phaseolus vulgaris][more]
gi|951042847|ref|XP_014518245.1|3.0e-0857.45PREDICTED: putative cysteine-rich receptor-like protein kinase 9 [Vigna radiata ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.022830.1Cucsa.022830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32099CYSTEINE-RICH REPEAT SECRETORY PROTEINcoord: 1..41
score: 4.4
NoneNo IPR availablePANTHERPTHR32099:SF3SUBFAMILY NOT NAMEDcoord: 1..41
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.022830Wild cucumber (PI 183967)cgycpiB494
Cucsa.022830Cucumber (Chinese Long) v2cgycuB468
Cucsa.022830Melon (DHL92) v3.6.1cgymedB542
Cucsa.022830Cucumber (Chinese Long) v3cgycucB511