Cucsa.018290 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.018290
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCalcium-binding EF-hand family protein
Locationscaffold00252 : 712337 .. 713346 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTTAACGGCGGATTCTTGTTACACTATAACGAAACTTCCTGGAAGCTGCCATGGCCGATCTCCCACTCTCATCCCTTCCATTTAAGTCGGCATTTTCTCCTTCTCTTTCACCTCCATTTTCTCTTCTCCTTCTCCCCAAGTTTCTCCTCTCTACCTTTCCCACTTTCTGCCATGATGAAAATCCCCAAAAGATTTAGCCCTAAACGCCTCTTCCGATCCAAAAAGCATCACTCCGCCGACGTATCCCGCTCGGATCCACCCTCTTTCGGCTCCGGTACCTCCTCTTCCTCGTCCTCTTCCGAGAATTTCTTCAAAGCTAACACCGTGAACACCGGTTACGGAACCCCGACTAGCGTTCTGGACTCGGACGGGAGGGGGAACGAGGGGGTTGTGTCGAGGAAGGAACTGGAGGCGATTCTTAGCCGGATCGCGTCAGAGGAAGAGGTTGCGATGATGTTGCGCGAAGTGGATAGCGGGGGCGATGGGTTCATACGGTTGGAGGAATTGATGGCTCGGGTGGGGTCGGGTGAAGCGGCGGGAGAGTCGGAGATGCGGGAGACGTTTGAGTTTTTTGACGCGGATCAGGATGGGAGGATCACGGCGGAGGAGCTTCACGGGGTTTTTAGATCAATAGGAGATGAGCGGTGCACGTTAGAGGATTGCGGGCGTATGATAAGGGATGTGGATGAGAACGGGGATGGCTTTGTGTGTTTCGCGGAGTTTGTGCGTATGATGGAGCTGCAGAGATGAATGAGTATACGGCTCTTGATGCATTTAAATGGACGGCTGTGATGGGATGGGATTATGGTTTTTTCATTTTTTTCTTTTTTCTTTTTTCTTTTTTTCTTTTTGGTTTTGAGTGTGTGCTATGTGCAATAGATATAGACACATGATCAAAAGTTGTGGCTTCAACCGTTGTTGGCCACTCCAAAAAGGGACTCTTCAATTTTTATAATGCTTAATGCAATTATTGAATATCAACTAAATGTCTATAATATTTTGTGTTTT

mRNA sequence

TCCTTAACGGCGGATTCTTGTTACACTATAACGAAACTTCCTGGAAGCTGCCATGGCCGATCTCCCACTCTCATCCCTTCCATTTAAGTCGGCATTttctccttctctttcacctccattttctcttctccttctccccaagtttctcctctctacctttccCACTTTCTGCCATGATGAAAATCCCCAAAAGATTTAGCCCTAAACGCCTCTTCCGATCCAAAAAGCATCACTCCGCCGACGTATCCCGCTCGGATCCACCCTCTTTCGGCTCCGGTACCTCCTCTTCCTCGTCCTCTTCCGAGAATTTCTTCAAAGCTAACACCGTGAACACCGGTTACGGAACCCCGACTAGCGTTCTGGACTCGGACGGGAGGGGGAACGAGGGGGTTGTGTCGAGGAAGGAACTGGAGGCGATTCTTAGCCGGATCGCGTCAGAGGAAGAGGTTGCGATGATGTTGCGCGAAGTGGATAGCGGGGGCGATGGGTTCATACGGTTGGAGGAATTGATGGCTCGGGTGGGGTCGGGTGAAGCGGCGGGAGAGTCGGAGATGCGGGAGACGTTTGAGTTTTTTGACGCGGATCAGGATGGGAGGATCACGGCGGAGGAGCTTCACGGGGTTTTTAGATCAATAGGAGATGAGCGGTGCACGTTAGAGGATTGCGGGCGTATGATAAGGGATGTGGATGAGAACGGGGATGGCTTTGTGTGTTTCGCGGAGTTTGTGCGTATGATGGAGCTGCAGAGATGAATGAGTATACGGCTCTTGATGCATTTAAATGGACGGCTGTGATGGGATGGGATTATGGTTttttcatttttttcttttttcttttttctttttttcttttTGGTTTTGAGTGTGTGCTATGTGCAATAGATATAGACACATGATCAAAAGTTGTGGCTTCAACCGTTGTTGGCCACTCCAAAAAGGGACTCTTCAATTTTTATAATGCTTAATGCAATTATTGAATATCAACTAAATGTCTATAATATTTTGTGTTTT

Coding sequence (CDS)

ATGATGAAAATCCCCAAAAGATTTAGCCCTAAACGCCTCTTCCGATCCAAAAAGCATCACTCCGCCGACGTATCCCGCTCGGATCCACCCTCTTTCGGCTCCGGTACCTCCTCTTCCTCGTCCTCTTCCGAGAATTTCTTCAAAGCTAACACCGTGAACACCGGTTACGGAACCCCGACTAGCGTTCTGGACTCGGACGGGAGGGGGAACGAGGGGGTTGTGTCGAGGAAGGAACTGGAGGCGATTCTTAGCCGGATCGCGTCAGAGGAAGAGGTTGCGATGATGTTGCGCGAAGTGGATAGCGGGGGCGATGGGTTCATACGGTTGGAGGAATTGATGGCTCGGGTGGGGTCGGGTGAAGCGGCGGGAGAGTCGGAGATGCGGGAGACGTTTGAGTTTTTTGACGCGGATCAGGATGGGAGGATCACGGCGGAGGAGCTTCACGGGGTTTTTAGATCAATAGGAGATGAGCGGTGCACGTTAGAGGATTGCGGGCGTATGATAAGGGATGTGGATGAGAACGGGGATGGCTTTGTGTGTTTCGCGGAGTTTGTGCGTATGATGGAGCTGCAGAGATGA

Protein sequence

MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPTSVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGEAAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR*
Homology
[Close]
BLAST of Cucsa.018290 vs. Swiss-Prot
Match: CML36_ARATH (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana GN=CML36 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-42
Identity = 108/212 (50.94%), Postives = 136/212 (64.15%), Query Frame = 1 

Query: 2   MKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPTS 61
           MK+ K   PKR F   K  S  VS+S P +F  G++SSSS  +          G  TPTS
Sbjct: 1   MKLAKLI-PKRFFIRSKDRST-VSKS-PTAFSFGSASSSSGQDCKNSGGDGGGGSVTPTS 60

Query: 62  VLDSD----------------GRGNEGVVSRKELEAILSRIA----SEEEVAMMLREVDS 121
           +L                    R N+G VSR +LE++LSR+     +EEE+ +ML+EVD 
Sbjct: 61  ILPEVPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDC 120

Query: 122 GGDGFIRLEELMARVGSGEAAGES-EMRETFEFFDADQDGRITAEELHGVFRSIGDERCT 181
            GDG IRLEEL +RV S + A +S E++ETFEFFDAD+DG I+A+EL  VF +IGDERCT
Sbjct: 121 DGDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDERCT 180

Query: 182 LEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           L+DC RMI DVDE+GDGFVCF EF RMM+LQR
Sbjct: 181 LDDCKRMIADVDEDGDGFVCFTEFSRMMDLQR 209

[Close]
BLAST of Cucsa.018290 vs. Swiss-Prot
Match: CML35_ARATH (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana GN=CML35 PE=2 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41
Identity = 105/204 (51.47%), Postives = 129/204 (63.24%), Query Frame = 1 

Query: 7   RFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPTSVLDSD 66
           R SPKRLFR+K    A VSRS+P SF S  SSSSS        N       TP SVL  +
Sbjct: 9   RLSPKRLFRTKS--KASVSRSEPSSFSSNASSSSSDGSY---GNLKQGPTATPISVLPQN 68

Query: 67  G---------------RGNEGVVSRKELEAILSRIA----SEEEVAMMLREVDSGGDGFI 126
                           R ++GVVSR +L A++SR++    S+EEV++MLREVD G  G I
Sbjct: 69  SGDFYTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCI 128

Query: 127 RLEELMARVG--SGEAAGESE-MRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDC 186
            LE+L +RV   SGE + E+E +RE FE FD D++G+I+AEELH VF  IGDERCTLE+C
Sbjct: 129 SLEDLASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEEC 188

Query: 187 GRMIRDVDENGDGFVCFAEFVRMM 189
            RMI  VD NGDGFVCF +F RMM
Sbjct: 189 MRMIATVDGNGDGFVCFDDFCRMM 207

[Close]
BLAST of Cucsa.018290 vs. Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 4.7e-20
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 1 

Query: 64  DSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMA--RVGSGEA 123
           D +G G   V   KE+   LS  AS EE   M+++ D  G+GFI L+E +A  ++G G  
Sbjct: 26  DKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQIGIGGG 85

Query: 124 AGE----SEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDG 183
                  S+++E FE +D D +GRI+A+ELH V +++G E+C+++DC +MI  VD +GDG
Sbjct: 86  GNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLG-EKCSVQDCKKMISKVDIDGDG 145

Query: 184 FVCFAEFVRMM 189
            V F EF +MM
Sbjct: 146 CVNFDEFKKMM 155


HSP 2 Score: 40.8 bits (94), Expect = 2.0e-02
Identity = 19/65 (29.23%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 126 EMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEFV 185
           ++++ F+ FD + DG+I+ +EL  V R++     + E+   M++  D +G+GF+   EFV
Sbjct: 17  DIKKVFQRFDKNGDGKISVDELKEVIRAL-SPTASPEETVTMMKQFDLDGNGFIDLDEFV 76

Query: 186 RMMEL 191
            + ++
Sbjct: 77  ALFQI 80

[Close]
BLAST of Cucsa.018290 vs. Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.1e-20
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1 

Query: 71  EGVVSRKELEAILSRIASE---EEVAMMLREVDSGGDGFIRLEELMA--------RVGSG 130
           +G +S +EL ++L  + +     EV  M+ E+DS  DGF+ L E  A          G G
Sbjct: 18  DGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAAFHCGPTPAHGGKG 77

Query: 131 ------EAAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDE 189
                 EAA E+E+RE F  +DAD +G+I+A ELH V R +GD +C++ DC RMIR VD 
Sbjct: 78  GDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGD-KCSVADCSRMIRSVDA 137


HSP 2 Score: 44.3 bits (103), Expect = 1.8e-03
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 1 

Query: 125 SEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEF 184
           +E+ + F  +DA+ DG+I+AEEL  V R++G      E   RM+ ++D + DGFV  +EF
Sbjct: 4   AELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGE-VRRMMDEMDSDRDGFVDLSEF 62

[Close]
BLAST of Cucsa.018290 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.1e-20
Identity = 50/128 (39.06%), Postives = 83/128 (64.84%), Query Frame = 1 

Query: 68  RGNEGVVSRKELEAILSRI---ASEEEVAMMLREVDSGGDGFIRLEELMARVGSGEAAGE 127
           + N+G +S  EL+ ++  +   AS+EE   M++E D  G+GFI L+E +A     + +  
Sbjct: 25  KNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSN 84

Query: 128 S----EMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC 187
           +    +++E F+ +D D++GRI+A ELH V +++G E+C+++DC RMI  VD +GDG V 
Sbjct: 85  NSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSDGDGCVD 144

Query: 188 FAEFVRMM 189
           F EF +MM
Sbjct: 145 FEEFKKMM 151


HSP 2 Score: 40.8 bits (94), Expect = 2.0e-02
Identity = 18/65 (27.69%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 126 EMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEFV 185
           ++++ F+ FD + DG+I+ +EL  V  ++     + E+   M+++ D +G+GF+   EFV
Sbjct: 15  DIKKVFQRFDKNNDGKISIDELKDVIGAL-SPNASQEETKAMMKEFDLDGNGFIDLDEFV 74

Query: 186 RMMEL 191
            + ++
Sbjct: 75  ALFQI 78


HSP 3 Score: 29.3 bits (64), Expect = 5.9e+01
Identity = 16/52 (30.77%), Postives = 28/52 (53.85%), Query Frame = 1 

Query: 63  LDSDGRGNEGVVSRKELEAILSRIASE---EEVAMMLREVDSGGDGFIRLEE 112
           LD +GR     +S  EL +++  +  +   ++   M+ +VDS GDG +  EE
Sbjct: 100 LDRNGR-----ISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEE 146

[Close]
BLAST of Cucsa.018290 vs. TrEMBL
Match: A0A0A0L0H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G355130 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.1e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT 60
           MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT
Sbjct: 1   MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT 60

Query: 61  SVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGE 120
           SVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGE
Sbjct: 61  SVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGE 120

Query: 121 AAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC 180
           AAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC
Sbjct: 121 AAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC 180

Query: 181 FAEFVRMMELQR 193
           FAEFVRMMELQR
Sbjct: 181 FAEFVRMMELQR 192

[Close]
BLAST of Cucsa.018290 vs. TrEMBL
Match: A0A067JTX4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22464 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-48
Identity = 121/220 (55.00%), Postives = 141/220 (64.09%), Query Frame = 1 

Query: 1   MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANT-VNTGYGTP 60
           M +  K  SPKRL  SKK  S  VS+SDP S+  G SSSSSS  +       V    GTP
Sbjct: 1   MKQFIKAISPKRLLGSKKDRSI-VSKSDPSSYSYGASSSSSSDSSVSNQKRGVTAEAGTP 60

Query: 61  TSVLD------SD----------------GRGNEGVVSRKELEAILSRIASE----EEVA 120
           TSVL       SD                 R N+G+VSR+ELEA+LSR+ +E    EEVA
Sbjct: 61  TSVLPEISGDWSDISTDFYSDLVQAFKLIDRDNDGIVSRRELEALLSRLGAEPPSQEEVA 120

Query: 121 MMLREVDSGGDGFIRLEELMARVGSG-EAAGESEMRETFEFFDADQDGRITAEELHGVFR 180
            ML EVD  GDG I +E LM R+GS  E AG+ E+R  FEFFDADQDG+ITAEEL GV++
Sbjct: 121 TMLSEVDHVGDGCISVEALMNRIGSACEPAGDDELRVAFEFFDADQDGKITAEELFGVYK 180

Query: 181 SIGDERCTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           +IGDERCT EDC RMI  VD+NGDGFVCF +F RMMELQR
Sbjct: 181 AIGDERCTFEDCMRMIASVDKNGDGFVCFEDFCRMMELQR 219

[Close]
BLAST of Cucsa.018290 vs. TrEMBL
Match: M5WA96_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010940mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46
Identity = 126/223 (56.50%), Postives = 147/223 (65.92%), Query Frame = 1 

Query: 6   KRFSPKRLFRSKKHHSADVSR--SDPPSFGSGT----SSSSSSSENFFKANTVNT--GYG 65
           K  SPKRLFRSKK  SA VSR  SDP SF SGT    SSSSSSS++  K  T     G G
Sbjct: 9   KSLSPKRLFRSKKDRSA-VSRRSSDPLSFESGTASSSSSSSSSSDSLHKPGTGAEAGGIG 68

Query: 66  TPTSVL-DSDG---------------------RGNEGVVSRKELEAILSRIA----SEEE 125
           TPTSVL +  G                     R N+GVVSRKELEA+LSR+     S+EE
Sbjct: 69  TPTSVLLERSGDWSDFSTDLQLDMAQAFKLIDRDNDGVVSRKELEALLSRLGADPPSQEE 128

Query: 126 VAMMLREVDSGGDGFIRLEELMARVGS--GEAAGESEMRETFEFFDADQDGRITAEELHG 185
           V +ML EVD  G+G I LE L++RVG   G AA +SE+R+ FE FD+D DG+I+AEEL  
Sbjct: 129 VMLMLSEVDREGNGSISLEALLSRVGPVCGPAA-DSELRDAFEVFDSDHDGKISAEELLN 188

Query: 186 VFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           VF +IGD+RCTLEDC RMI  VD+NGDGFVCF +F RMMELQR
Sbjct: 189 VFTAIGDDRCTLEDCRRMIAGVDKNGDGFVCFEDFARMMELQR 229

[Close]
BLAST of Cucsa.018290 vs. TrEMBL
Match: G7KRQ4_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_7g090450 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.5e-46
Identity = 119/219 (54.34%), Postives = 141/219 (64.38%), Query Frame = 1 

Query: 5   PKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPTSVLD 64
           PK  SPKRLFR K+  S  VSRSDP SFGS    SSSS E+  K   +  G  TPTSVL 
Sbjct: 6   PKNLSPKRLFRKKEKSS--VSRSDPLSFGS----SSSSDESLHKP--ITAGSQTPTSVLP 65

Query: 65  ------SD----------------GRGNEGVVSRKELEAILSRIASE----EEVAMMLRE 124
                 SD                 R N+GVVSR+ELEA+L+R+ +     EE+A+ML E
Sbjct: 66  EVSGEWSDITVDVQCELAQAFRLIDRDNDGVVSREELEAVLTRLGARPPTPEEIALMLSE 125

Query: 125 VDSGGDGFIRLEELMARVGSGEAAG-----ESEMRETFEFFDADQDGRITAEELHGVFRS 184
           VDS G G I +E +M RVGSG ++G     E E+RE FE FD D+DGRI+AEEL  VFR+
Sbjct: 126 VDSDGKGCISVETIMNRVGSGSSSGSDPNPEEELREAFEVFDTDRDGRISAEELLRVFRA 185

Query: 185 IGDERCTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           IGDERCTLE+C RMI  VD+NGDGFVCF EF  MM+LQR
Sbjct: 186 IGDERCTLEECKRMIAGVDKNGDGFVCFQEFSLMMDLQR 216

[Close]
BLAST of Cucsa.018290 vs. TrEMBL
Match: W9RJF8_9ROSA (Putative calcium-binding protein CML36 OS=Morus notabilis GN=L484_015534 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.0e-45
Identity = 117/219 (53.42%), Postives = 139/219 (63.47%), Query Frame = 1 

Query: 7   RFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPTSVLD-- 66
           + SPK  FRS        S+SDPPSFGSGT+SSSSS  +  KA     G  TPTSVL   
Sbjct: 12  KLSPKGPFRSSSKEKYTPSKSDPPSFGSGTTSSSSSLSDL-KAGAGVGGSVTPTSVLPEI 71

Query: 67  ----SD----------------GRGNEGVVSRKELEAILSRIA-------SEEEVAMMLR 126
               SD                 R N+G+VSRKELEA+LSR+        SE+ VA ML 
Sbjct: 72  SGDLSDFSADIHSELAEAFKLIDRDNDGIVSRKELEALLSRLGGVGSISESEDFVASMLS 131

Query: 127 EVDSG-GDGFIRLEELMARVGSG---EAAGESEMRETFEFFDADQDGRITAEELHGVFRS 186
           EVD G G+G I +E LM+RVGS    E AG+SE+RE F+FFD D+DGRITA+ELH  F +
Sbjct: 132 EVDGGDGEGCISVEALMSRVGSAAACEPAGDSELREAFDFFDTDRDGRITADELHSFFTA 191

Query: 187 IGDERCTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           IGDERCTL+DC RMI  V  +G+GFVCF +F RMMELQR
Sbjct: 192 IGDERCTLQDCRRMIDGVGRSGEGFVCFEDFSRMMELQR 229

[Close]
BLAST of Cucsa.018290 vs. TAIR10
Match: AT3G10190.1 (AT3G10190.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 174.5 bits (441), Expect = 6.4e-44
Identity = 108/212 (50.94%), Postives = 136/212 (64.15%), Query Frame = 1 

Query: 2   MKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPTS 61
           MK+ K   PKR F   K  S  VS+S P +F  G++SSSS  +          G  TPTS
Sbjct: 1   MKLAKLI-PKRFFIRSKDRST-VSKS-PTAFSFGSASSSSGQDCKNSGGDGGGGSVTPTS 60

Query: 62  VLDSD----------------GRGNEGVVSRKELEAILSRIA----SEEEVAMMLREVDS 121
           +L                    R N+G VSR +LE++LSR+     +EEE+ +ML+EVD 
Sbjct: 61  ILPEVPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDC 120

Query: 122 GGDGFIRLEELMARVGSGEAAGES-EMRETFEFFDADQDGRITAEELHGVFRSIGDERCT 181
            GDG IRLEEL +RV S + A +S E++ETFEFFDAD+DG I+A+EL  VF +IGDERCT
Sbjct: 121 DGDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDERCT 180

Query: 182 LEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           L+DC RMI DVDE+GDGFVCF EF RMM+LQR
Sbjct: 181 LDDCKRMIADVDEDGDGFVCFTEFSRMMDLQR 209

[Close]
BLAST of Cucsa.018290 vs. TAIR10
Match: AT2G41410.1 (AT2G41410.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 170.6 bits (431), Expect = 9.3e-43
Identity = 105/204 (51.47%), Postives = 129/204 (63.24%), Query Frame = 1 

Query: 7   RFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPTSVLDSD 66
           R SPKRLFR+K    A VSRS+P SF S  SSSSS        N       TP SVL  +
Sbjct: 9   RLSPKRLFRTKS--KASVSRSEPSSFSSNASSSSSDGSY---GNLKQGPTATPISVLPQN 68

Query: 67  G---------------RGNEGVVSRKELEAILSRIA----SEEEVAMMLREVDSGGDGFI 126
                           R ++GVVSR +L A++SR++    S+EEV++MLREVD G  G I
Sbjct: 69  SGDFYTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCI 128

Query: 127 RLEELMARVG--SGEAAGESE-MRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDC 186
            LE+L +RV   SGE + E+E +RE FE FD D++G+I+AEELH VF  IGDERCTLE+C
Sbjct: 129 SLEDLASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEEC 188

Query: 187 GRMIRDVDENGDGFVCFAEFVRMM 189
            RMI  VD NGDGFVCF +F RMM
Sbjct: 189 MRMIATVDGNGDGFVCFDDFCRMM 207

[Close]
BLAST of Cucsa.018290 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family)

HSP 1 Score: 99.4 bits (246), Expect = 2.6e-21
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 1 

Query: 64  DSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMA--RVGSGEA 123
           D +G G   V   KE+   LS  AS EE   M+++ D  G+GFI L+E +A  ++G G  
Sbjct: 26  DKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQIGIGGG 85

Query: 124 AGE----SEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDG 183
                  S+++E FE +D D +GRI+A+ELH V +++G E+C+++DC +MI  VD +GDG
Sbjct: 86  GNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLG-EKCSVQDCKKMISKVDIDGDG 145

Query: 184 FVCFAEFVRMM 189
            V F EF +MM
Sbjct: 146 CVNFDEFKKMM 155


HSP 2 Score: 40.8 bits (94), Expect = 1.1e-03
Identity = 19/65 (29.23%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 126 EMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEFV 185
           ++++ F+ FD + DG+I+ +EL  V R++     + E+   M++  D +G+GF+   EFV
Sbjct: 17  DIKKVFQRFDKNGDGKISVDELKEVIRAL-SPTASPEETVTMMKQFDLDGNGFIDLDEFV 76

Query: 186 RMMEL 191
            + ++
Sbjct: 77  ALFQI 80

[Close]
BLAST of Cucsa.018290 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 50/128 (39.06%), Postives = 83/128 (64.84%), Query Frame = 1 

Query: 68  RGNEGVVSRKELEAILSRI---ASEEEVAMMLREVDSGGDGFIRLEELMARVGSGEAAGE 127
           + N+G +S  EL+ ++  +   AS+EE   M++E D  G+GFI L+E +A     + +  
Sbjct: 25  KNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSN 84

Query: 128 S----EMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC 187
           +    +++E F+ +D D++GRI+A ELH V +++G E+C+++DC RMI  VD +GDG V 
Sbjct: 85  NSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSDGDGCVD 144

Query: 188 FAEFVRMM 189
           F EF +MM
Sbjct: 145 FEEFKKMM 151


HSP 2 Score: 40.8 bits (94), Expect = 1.1e-03
Identity = 18/65 (27.69%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 126 EMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEFV 185
           ++++ F+ FD + DG+I+ +EL  V  ++     + E+   M+++ D +G+GF+   EFV
Sbjct: 15  DIKKVFQRFDKNNDGKISIDELKDVIGAL-SPNASQEETKAMMKEFDLDGNGFIDLDEFV 74

Query: 186 RMMEL 191
            + ++
Sbjct: 75  ALFQI 78


HSP 3 Score: 29.3 bits (64), Expect = 3.3e+00
Identity = 16/52 (30.77%), Postives = 28/52 (53.85%), Query Frame = 1 

Query: 63  LDSDGRGNEGVVSRKELEAILSRIASE---EEVAMMLREVDSGGDGFIRLEE 112
           LD +GR     +S  EL +++  +  +   ++   M+ +VDS GDG +  EE
Sbjct: 100 LDRNGR-----ISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEE 146

[Close]
BLAST of Cucsa.018290 vs. TAIR10
Match: AT2G15680.1 (AT2G15680.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 1 

Query: 63  LDSDGRGNEGVVSRKELEAILSRIASE---EEVAMMLREVDSGGDGFIRLEELMARVGSG 122
           LD DG+     +S+ E + +L  +  E   E+V  + + VD  GDGFI   E +      
Sbjct: 60  LDKDGK-----ISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRS 119

Query: 123 EAAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFV 182
                S++R +F  FD + DG+I+AEE+  V   +G ERC+LEDC RM+R VD +GDG V
Sbjct: 120 GGIRSSDIRNSFWTFDLNGDGKISAEEVMSVLWKLG-ERCSLEDCNRMVRAVDADGDGLV 179

Query: 183 CFAEFVRMM 189
              EF++MM
Sbjct: 180 NMEEFIKMM 182


HSP 2 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 1 

Query: 125 SEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVCFAEF 184
           +EMR  F  FD D+DG+I+  E   V R++G ER  +ED  ++ + VD +GDGF+ F EF
Sbjct: 49  NEMRRVFSRFDLDKDGKISQTEYKVVLRALGQER-AIEDVPKIFKAVDLDGDGFIDFREF 108

Query: 185 V 186
           +
Sbjct: 109 I 108

[Close]
BLAST of Cucsa.018290 vs. NCBI nr
Match: gi|449467126|ref|XP_004151276.1| (PREDICTED: probable calcium-binding protein CML36 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 4.4e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT 60
           MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT
Sbjct: 1   MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT 60

Query: 61  SVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGE 120
           SVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGE
Sbjct: 61  SVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGE 120

Query: 121 AAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC 180
           AAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC
Sbjct: 121 AAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC 180

Query: 181 FAEFVRMMELQR 193
           FAEFVRMMELQR
Sbjct: 181 FAEFVRMMELQR 192

[Close]
BLAST of Cucsa.018290 vs. NCBI nr
Match: gi|659115502|ref|XP_008457589.1| (PREDICTED: probable calcium-binding protein CML36 [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-96
Identity = 182/192 (94.79%), Postives = 186/192 (96.88%), Query Frame = 1 

Query: 1   MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT 60
           MMKIPKRFSPKRLFRSKKH SADVSRSDPPSFGSGTSSSSSSSENFFK N+VNTGYGTPT
Sbjct: 1   MMKIPKRFSPKRLFRSKKHQSADVSRSDPPSFGSGTSSSSSSSENFFKPNSVNTGYGTPT 60

Query: 61  SVLDSDGRGNEGVVSRKELEAILSRIASEEEVAMMLREVDSGGDGFIRLEELMARVGSGE 120
           SVLDSD R NEGVV+RKELEAILSRIASEEEVAMML EVDSGGDGFIRLEELMARVGSGE
Sbjct: 61  SVLDSDVRENEGVVTRKELEAILSRIASEEEVAMMLSEVDSGGDGFIRLEELMARVGSGE 120

Query: 121 AAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDERCTLEDCGRMIRDVDENGDGFVC 180
           AAGESE+RETFEFFDADQDGRITAEELHGVFRSIGDE+CTLEDC RMIRDVDENGDGFVC
Sbjct: 121 AAGESELRETFEFFDADQDGRITAEELHGVFRSIGDEQCTLEDCRRMIRDVDENGDGFVC 180

Query: 181 FAEFVRMMELQR 193
           FAEFVRMMELQR
Sbjct: 181 FAEFVRMMELQR 192

[Close]
BLAST of Cucsa.018290 vs. NCBI nr
Match: gi|470135628|ref|XP_004303614.1| (PREDICTED: probable calcium-binding protein CML36 [Fragaria vesca subsp. vesca])

HSP 1 Score: 205.7 bits (522), Expect = 7.4e-50
Identity = 123/214 (57.48%), Postives = 141/214 (65.89%), Query Frame = 1 

Query: 1   MMKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKANTVNTGYGTPT 60
           +MKI    SPKRLFRSKK  SA VSRSDPPSFGSGT+SSSSS               TPT
Sbjct: 3   LMKI-NSLSPKRLFRSKKDRSA-VSRSDPPSFGSGTASSSSSDSLHKPGGPA----ATPT 62

Query: 61  SVLDSD----------------GRGNEGVVSRKELEAILSRIA-----SEEEVAMMLREV 120
           SVL  D                 R N+GVVSR ELEA+L R+      ++EEVAMML EV
Sbjct: 63  SVLPGDWSEFSSVDMAQAFRLIDRDNDGVVSRTELEALLKRLLGAEPPTQEEVAMMLSEV 122

Query: 121 DSGGDGFIRLEELMARVGSG-EAAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDER 180
           D  GDG I LE L+ R G G E A +SE+RE FE FD D DG+I+AEEL  VF +IGDER
Sbjct: 123 DGDGDGCIPLEALLHRFGPGCEPAADSELREAFEVFDTDHDGKISAEELLSVFTAIGDER 182

Query: 181 CTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           CTLE+C RMI +VD+NGDGFVCF +F RMM+LQR
Sbjct: 183 CTLEECRRMIAEVDKNGDGFVCFQDFARMMDLQR 210

[Close]
BLAST of Cucsa.018290 vs. NCBI nr
Match: gi|657999884|ref|XP_008392376.1| (PREDICTED: LOW QUALITY PROTEIN: probable calcium-binding protein CML36 [Malus domestica])

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-48
Identity = 125/214 (58.41%), Postives = 145/214 (67.76%), Query Frame = 1 

Query: 6   KRFSPKRLFRSKKHHSADVSRSDPPSFGSGT-SSSSSSSENFFKANTVNTGYGTPTSVL- 65
           K  SPKRLFRSKK  S+ VSRSDPPSFGSGT SSSSSSS++  K      G  TPTSVL 
Sbjct: 9   KDLSPKRLFRSKKDRSS-VSRSDPPSFGSGTDSSSSSSSDSIHKPGAGAGGIATPTSVLP 68

Query: 66  -----------DSD--------GRGNEGVVSRKELEAILSRIA----SEEEVAMMLREVD 125
                      D D         R N+GVVSRKELEA+LSR+     S+EEV +ML EVD
Sbjct: 69  EKSGDWSDFSADLDMAQAFKLIDRDNDGVVSRKELEALLSRLGNDPPSQEEVTLMLSEVD 128

Query: 126 SGGDGFIRLEELMARVG--SGEAAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDER 185
             G+G I LE L+ +VG  SG AA +SE+R+ FE  D D DG+I+AEEL  VF +IGDER
Sbjct: 129 RDGNGSITLEALLNQVGPVSGPAA-DSELRDAFEVXDTDNDGKISAEELLRVFTAIGDER 188

Query: 186 CTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           CTLE+C RMI  VD++GDGFVCF EFV MMELQR
Sbjct: 189 CTLEECRRMIDGVDKDGDGFVCFEEFVHMMELQR 220

[Close]
BLAST of Cucsa.018290 vs. NCBI nr
Match: gi|694428823|ref|XP_009341958.1| (PREDICTED: LOW QUALITY PROTEIN: probable calcium-binding protein CML36, partial [Pyrus x bretschneideri])

HSP 1 Score: 200.7 bits (509), Expect = 2.4e-48
Identity = 124/215 (57.67%), Postives = 145/215 (67.44%), Query Frame = 1 

Query: 5   PKRFSPKRLFRSKKHHSADVSRSDPPSFGSGT-SSSSSSSENFFKANTVNTGYGTPTSVL 64
           PK  SPKRLF SKK  S+ VSRS+PPSFGSGT SSSSSSS++  K      G  TPTSVL
Sbjct: 79  PKNLSPKRLFGSKKDRSS-VSRSEPPSFGSGTDSSSSSSSDSIHKPGAGAGGITTPTSVL 138

Query: 65  ------------DSD--------GRGNEGVVSRKELEAILSRIA----SEEEVAMMLREV 124
                       D D         R N+GVVSRKELEA+L R+     S+EEV +ML EV
Sbjct: 139 PEKSGDWSDFSADLDMAQAFKLIDRDNDGVVSRKELEALLCRLGNAPPSQEEVTLMLSEV 198

Query: 125 DSGGDGFIRLEELMARVG--SGEAAGESEMRETFEFFDADQDGRITAEELHGVFRSIGDE 184
           D  G+G I LE L+ +VG  SG AA +SE+R+ FE FD D DG+I+AEEL  VF +IGDE
Sbjct: 199 DRDGNGSITLEALLNQVGPVSGPAA-DSELRDAFEVFDTDNDGKISAEELLRVFTAIGDE 258

Query: 185 RCTLEDCGRMIRDVDENGDGFVCFAEFVRMMELQR 193
           RCTLE+C RMI  VD++GDGFVCF EFV MMELQR
Sbjct: 259 RCTLEECRRMIDGVDKDGDGFVCFEEFVHMMELQR 291

The following BLAST results are available for this feature:
BLAST of Cucsa.018290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML36_ARATH1.1e-4250.94Probable calcium-binding protein CML36 OS=Arabidopsis thaliana GN=CML36 PE=2 SV=... [more]
CML35_ARATH1.6e-4151.47Probable calcium-binding protein CML35 OS=Arabidopsis thaliana GN=CML35 PE=2 SV=... [more]
CML24_ARATH4.7e-2041.98Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2[more]
CML18_ORYSJ6.1e-2042.96Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 ... [more]
CML23_ARATH6.1e-2039.06Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=... [more]
BLAST of Cucsa.018290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0H1_CUCSA3.1e-103100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G355130 PE=4 SV=1[more]
A0A067JTX4_JATCU2.2e-4855.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22464 PE=4 SV=1[more]
M5WA96_PRUPE2.0e-4656.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010940mg PE=4 SV=1[more]
G7KRQ4_MEDTR4.5e-4654.34EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_7g090450 PE... [more]
W9RJF8_9ROSA1.0e-4553.42Putative calcium-binding protein CML36 OS=Morus notabilis GN=L484_015534 PE=4 SV... [more]
BLAST of Cucsa.018290 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10190.16.4e-4450.94 Calcium-binding EF-hand family protein[more]
AT2G41410.19.3e-4351.47 Calcium-binding EF-hand family protein[more]
AT5G37770.12.6e-2141.98 EF hand calcium-binding protein family[more]
AT1G66400.13.4e-2139.06 calmodulin like 23[more]
AT2G15680.11.2e-1839.53 Calcium-binding EF-hand family protein[more]
BLAST of Cucsa.018290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449467126|ref|XP_004151276.1|4.4e-103100.00PREDICTED: probable calcium-binding protein CML36 [Cucumis sativus][more]
gi|659115502|ref|XP_008457589.1|2.3e-9694.79PREDICTED: probable calcium-binding protein CML36 [Cucumis melo][more]
gi|470135628|ref|XP_004303614.1|7.4e-5057.48PREDICTED: probable calcium-binding protein CML36 [Fragaria vesca subsp. vesca][more]
gi|657999884|ref|XP_008392376.1|1.4e-4858.41PREDICTED: LOW QUALITY PROTEIN: probable calcium-binding protein CML36 [Malus do... [more]
gi|694428823|ref|XP_009341958.1|2.4e-4857.67PREDICTED: LOW QUALITY PROTEIN: probable calcium-binding protein CML36, partial ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.018290.1Cucsa.018290.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 125..189
score: 1.
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 72..115
score: 3.
IPR002048EF-hand domainSMARTSM00054efh_1coord: 163..191
score: 1.5E-4coord: 126..154
score: 1.3E-4coord: 91..119
score:
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 159..192
score: 12.282coord: 122..157
score: 14.29coord: 87..121
score: 7
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 122..189
score: 3.6E-19coord: 62..113
score: 2.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 70..188
score: 8.83
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 135..147
score: -coord: 172..184
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 71..188
score: 1.4
NoneNo IPR availablePANTHERPTHR10891:SF605CALCIUM-BINDING PROTEIN CML25-RELATEDcoord: 71..188
score: 1.4