Cucsa.017970 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACTCTCTTCTGTTATCCTATCTCTCAAGGAAGAACAGAAACCCTTTTCCTTGTCAATTTCTAACTGCCTTTCCCGCCCACACTTATTCTTTATTTATACTAACCTAACTCACGTGTTACTCTACACACATGTTGTGCTACTACCCTTCTTTCCTCTCCTACTATATTGATATAGTATTGGGGGTCTATCAATCTCCTGATCATGCGCTTCCATTTTCTCCTCCATGCATGTTTGAACCATTGTATTCCTCTTGCCCAGAAAAGTTGGCTTTGATACCAATTTGATGGAACTCCTTTTGGAATTTAGTTATAGAAAATTTATTGCTTCAATTCGAAAGATGAATTACTAGGAAAAAATCACACGAAAAGAACAATCGAATTTAGGAGATCTCAATTTGGTCGACAATCTAACTCTCTCTCTGCTATCCTCTCTCTCAAAGAAGAGCATGAGCGAAATCTTCGTCTCTTTCTTTTTCCTTCTACTATATTGCAGTATGATAGGGGGTCTATCAGAAAGTTGATTTACTTATCTCACACTAGGCCTAACATCTCCTATGCTGGGAGCATCGTCAGTCAAATCATGCAAGCACCTTATGAGGATCATATGGAAGCGATTAATAGGATTATGAGGTATTTAAAAGCAACTCCTAGTAAAAGTCTGAGATTTAGGAAGACCGACAAAAGATGTATTAAAGCTTATATTGATTATGACTGGACATGATCTGTTGTTGATAGAAAGTCTACCTCATGATACTGTACTTTTGTGTCGGACAATTTTGTTACTTGGAGAAGTAAGAAGCAAGGAGTTGTGGCTAGAAGTAAAGTTGAAGTCGAATATAGGGCTATGAGTTTGGGGATTTGTGAGATCTGGCTCCAAAAGGTGTTGTCAGATTTTTGTCAATACTATGAGGTCCCTATGAAGCTATTCTTCGATAACAAGGCAACCATTAACATTGCAAATAACTCAGTCCAACATGACAGGACTAAACATGTGGAGATTGACAGACTCTTTATCAAAGAGAAGCTTGATGATG ATGAAACTCtcttctgttatcctatctctcaaggaagaacagaaacccttttccttgtcaatttctaacttattgggggtctatcaatctcctgatcatgcgcttccattttctcctccatgcatgtttgaaccattggggtctatCAgaaagttgatttacttatctcacactaggcctaacatctcctatgctgggagcatcgtcagtcaaatcatgcaagcaccttatgaggatcatatggaagcgattaataggattatgagaagtaagaagcaaggagttgtggctagaagtaaagttgaagtcgaatatagggctatgagtttggggatttgtgagatctggctccaaaaggtgttgtcagatttttgtcaatactatgaggtccctatgaagctattcttcgataacaaggcaaccattaacattgcaaataactcagtccaacatgacaggactaaacatgtggagattgacagactctttatcaaagagaagcttgatgatg ATGAAACTCTCTTCTGTTATCCTATCTCTCAAGGAAGAACAGAAACCCTTTTCCTTGTCAATTTCTAACTTATTGGGGGTCTATCAATCTCCTGATCATGCGCTTCCATTTTCTCCTCCATGCATGTTTGAACCATTGGGGTCTATCAGAAAGTTGATTTACTTATCTCACACTAGGCCTAACATCTCCTATGCTGGGAGCATCGTCAGTCAAATCATGCAAGCACCTTATGAGGATCATATGGAAGCGATTAATAGGATTATGAGAAGTAAGAAGCAAGGAGTTGTGGCTAGAAGTAAAGTTGAAGTCGAATATAGGGCTATGAGTTTGGGGATTTGTGAGATCTGGCTCCAAAAGGTGTTGTCAGATTTTTGTCAATACTATGAGGTCCCTATGAAGCTATTCTTCGATAACAAGGCAACCATTAACATTGCAAATAACTCAGTCCAACATGACAGGACTAAACATGTGGAGATTGACAGACTCTTTATCAAAGAGAAGCTTGATGATG MKLSSVILSLKEEQKPFSLSISNLLGVYQSPDHALPFSPPCMFEPLGSIRKLIYLSHTRPNISYAGSIVSQIMQAPYEDHMEAINRIMRSKKQGVVARSKVEVEYRAMSLGICEIWLQKVLSDFCQYYEVPMKLFFDNKATINIANNSVQHDRTKHVEIDRLFIKEKLDDX
BLAST of Cucsa.017970 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-08 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 1
BLAST of Cucsa.017970 vs. TrEMBL
Match: A5AF46_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039504 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.6e-29 Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1
BLAST of Cucsa.017970 vs. TrEMBL
Match: A0A151THQ0_CAJCA (Copia protein OS=Cajanus cajan GN=KK1_012854 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 5.8e-29 Identity = 72/142 (50.70%), Postives = 96/142 (67.61%), Query Frame = 1
BLAST of Cucsa.017970 vs. TrEMBL
Match: A5AS05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013040 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 9.9e-29 Identity = 72/150 (48.00%), Postives = 94/150 (62.67%), Query Frame = 1
BLAST of Cucsa.017970 vs. TrEMBL
Match: A0A151UHL2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_049586 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28 Identity = 69/138 (50.00%), Postives = 94/138 (68.12%), Query Frame = 1
BLAST of Cucsa.017970 vs. TrEMBL
Match: A5ANL3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021018 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28 Identity = 75/145 (51.72%), Postives = 92/145 (63.45%), Query Frame = 1
BLAST of Cucsa.017970 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8) HSP 1 Score: 65.1 bits (157), Expect = 4.9e-11 Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 1
BLAST of Cucsa.017970 vs. NCBI nr
Match: gi|147817716|emb|CAN71214.1| (hypothetical protein VITISV_039504 [Vitis vinifera]) HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29 Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1
BLAST of Cucsa.017970 vs. NCBI nr
Match: gi|657979881|ref|XP_008381914.1| (PREDICTED: uncharacterized protein LOC103444742 [Malus domestica]) HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29 Identity = 73/122 (59.84%), Postives = 88/122 (72.13%), Query Frame = 1
BLAST of Cucsa.017970 vs. NCBI nr
Match: gi|731407939|ref|XP_010656665.1| (PREDICTED: uncharacterized protein LOC104880724, partial [Vitis vinifera]) HSP 1 Score: 136.3 bits (342), Expect = 4.9e-29 Identity = 71/123 (57.72%), Postives = 89/123 (72.36%), Query Frame = 1
BLAST of Cucsa.017970 vs. NCBI nr
Match: gi|1012355371|gb|KYP66558.1| (Copia protein [Cajanus cajan]) HSP 1 Score: 135.6 bits (340), Expect = 8.3e-29 Identity = 72/142 (50.70%), Postives = 96/142 (67.61%), Query Frame = 1
BLAST of Cucsa.017970 vs. NCBI nr
Match: gi|147857538|emb|CAN82537.1| (hypothetical protein VITISV_013040 [Vitis vinifera]) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 72/150 (48.00%), Postives = 94/150 (62.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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