Cucsa.012630 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.012630
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold00164 : 296254 .. 309261 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATCCTTCCGAAGGCCTGGGTTCAGAATCGGCGGCAATTGGAATCGACTCCACCACCAAGGACGACCTTTGCATGGAGATCGACCCACCTTTCCGCGAGAATTTGGCCACTGCTGATGACTGGAGGAAAGCCCTGAACAAGGTTGTTCCTGCCGTCATTGTGTTGCGCACCACCGCCTGTCGGGCATTCGACACTGAATCGGCTGGTGCGAGCTATGCTACTGGATTCGTTGTTGATAAGCGCCGTGGGATTATCCTCACCAACCGTCATGTTGTTAAGCCAGGTATTGTTGGACCTTCATTTCTGTTGCCTTATTTTTCTTACTTGTGCAATTGCTGAATGGAGTGAAGTTCAATTCTCCTATCTCGATATTGTTTAGCTCTGAAATTCGTTGGGATTAACGTGTAATGGGTTTCAGAAGGTAAATTAAGTCTTCAACTGTCTGATGGGATTTCATTTGGGGTGTTTTATATTTAATTCTTGTTCATCTGGTATTAGAATTCAAGTTATTTCGTATTTTGTTTAAGTGAAACCTGGTTAGTTTGATGAACAAAAGTTTCTTTTtCTTTTTTGATGAAAAATCTGGGAGTAAAAATAAAGAATACAAAAGAGTTAACAAAAATCACAAACCAAAAAGTGGGAGCATAAACACAACGACTAACGACCCAACAAGTTGAGAAAGAGCTCAAATCCAAGAGAATAAGACGGAGGGATAATTAAGAAAGTTTTTAGAGATAGATACCTAGAAAGACACATTAAACTTGGCAAGTGCCCACACCACTTTCCTAGATTTTACATTCCTCTAAAATCTAGTCTAATATTCCATTAAGAAAGAAGAAAGACTAGCATGCCAGAGAGTATATCCTTTATCGTGAAAGGGTGGAATGAAATAGAGCCTTCTCGATCATGTGCCAAAAATCCTTGTTACTAGCCAAGCGATGCGATATGTCTCCAAGATGATATTTCCAAATTGTTACGCCATGTCCCAAGATCACTTCTTGCGATCAAATGGAGACATGAGTCACATGACTGTCTAGACACTCAACGCATATATCCCCGCGAGATAGCATGCTAAACGCCTAGTAAGCGGAATTAACTCAACTTTCCAATCTTAACACAACTTGAATCTTTAGCTTTTATTGCCTAGTTTAAACTTAAATCCTTAACTTATTAAGCGATATGAATATTCACAACGTAACATAACAACAAACTTCTCTTTATTAACTTAATAACATGCGTTCTATAATTCTTTCTCATCTACAAAGAACTATAAGAAAAAGGCTTCCAACACTTAGTGCAACTTTCCCAACTTTCAACTTCTGGCTAACGCCTCAATGTGTAGCAGCTCACCTTACCCTTCTTTAACTTGGCCTCAGCGCCTTGTCACCTGAGGAAGGGAAACTTAACACATAAGTCAAATACTTAGTGAGTGATAAATTTAGAAAACCTTTTGGGGAATACAATTCAATCTCTTAAATTCATTTTCATTTGCATAAATAGGCCTCAACGCCTCATTTCAATAAACCATATAAATCATTCATTAGTCCTACTTATTCCTTTCCACCAAGAACATGAACCATGTCCATGCATAAACTTGGGATTCATTTCACCAGCATCCCTTGGGGAACTCCAGATTCATTTCTCGTTGCTTATGCTATTAATTCAAATGCATTTGGCCAACTTCTCAATGCCTTGTGGTCTACAACACCACCATGGTTTCTTTTACTCATTATGTTGCACATAATAGCTAGCTTATTGATAGGAATAGGGCTAATGGTTTACTCGCATACAAACATCACAATCATCACATAGAAATTTTAGTTTAGAAACTTTCTTTTCAATAAACAACATCAACATCAATATCATTACAATACACATTAAACATAAATACAACATGAGACTCATAATGAATGCTTTCAAAACACTTATTTCTTTTAGAAAACCACTCACTAAAATACTTAGCCTTAGTTTCCTTCCTTTCTAAACGACTACTCCGAATCCCTTCTTCTCGCCTAATGCTTCCTTAGCAAGCAACAGAATAGTTAGGAAATTCTCAGAATAACAACTCTCTTTAGATCCTTCAATCCTATTGATACCAATCTTAAATTAGATAGTCATCCTTTAGCTTCTCTTAGCTCGCCAGCTCCTACTTAACACTTTAGACGTGCCGGTTTACTTAGCTTCTCAAACCTTGCTTAAGTTTAACTCAACACGTAAACGGCTGTCTAATCAAGGTTAGAAATTTCCTTGAAATACTTAACTTTAAATGACTACTTTCTTCTCGCGTTAAACATCAAAACGCCTAACTTTTTGTGTTGAACACATACTTCTTTATCGCATTGCTCGACTTCAATGCAAACTTCCAAAACGCCTAAGTCTTCAAAACGCCTTCTTCACACTTATTTCAAAATGACCCTTCTATTCCAGACATGGGTCTCACACAAATTGAGGGAGAAACTGGCATTTTCAAAGGATATGATTGAAATCTTCAGATGCTTACCTCTTCCTATAAAGGAAAAaCAAAACTGCAGACGTCTTTCTACAAAGAATACACCTTTGTGACCTCAAGAAGGGAGAAGAATATATTGGAATATGAAACTTCAGACATTATTCTATTGTTGAAGTTTTGATTGCTATACAGAAAATCTTTGTTTGGATGATAAATGGTCTCATAGATGATATGTGAGAGGGGAGGAAAGTTAAGCCCTGTGTCAGAGAAGATTTCAGAAAAAAATTTCAACTGGCTGTACGTGAATTAATGTTATCTTTGTTGAAATGAGAGACAATTTACCCTAAAAAGATCCAAGAAATAAATCTGAGGATGCTGGTAGCGTACACAAATTTTATATTGTTCCATGTCTTTGTGGTCCTTTGCTTCATGATCTCTTCTTGGAACATAACAGAAGAATTTTTGAAGATAAAATCACCCCTTCAGTGTTTTTATGGGATATGTACAACTTTATGCTTCTTGGTGGTGTCACTATTTCAATGATCTATTTGTAACTATCCTCTTGGATTGGAACCCTTTATGTGTGGGTAGTTCTCTTGAGTGGGGATTCTCTCTTCTCCCAGCCCTTAGACTGCATGGATCTTGAAACAGAGACACATCCCTCTCGTTTCTTATATATAAAAAATGTTCAATGTCACTTATGGTTGCATGAATCTTGTAAATTTGACCATTTAATGTTGTTTATTTATTTATTTTTGCACTCTTTGGTTTCAGGACCTGTAGTGGCAGAGGCTATGTTTGTCAATAGGGAAGAAGTTCCTGTACGGCCTATATACAGAGATCCGGTAAGTCTTCTGTGATTTGAAGTGCTTGCAATTCTGGTTCATGCATGTGGCTTTTCGTCGATCAATTTGGTTTACTTCTGAAGCTTTTGTGATGGAATCGTGGGAAAAGGCTGCAGGAAGTTTAGACTTTTGTTAAGAAAAAaCTATTTGTTCAAGAACTAGTATAAATCTATGCGGATGAATTCCAAGGAAAGTCAAAACTTTTGGATAATATTTTAAAAaCCAAGTTTGTTGGATTTGTTATGTTGTCTAAATTTTAAACTTTATGTTCACGAGTGTCTGACACATGATCATCAAACTCAAGTTTTGTTAAATAGTGTCAGCTCATGTTCAACAAATATTTAAGTGTTGAAGTATTTGATGGATGTCGGACATAGACATGAAAATGTATCTGTCTGTGCTTCATAGCAATGAAGGATGAGTTTTCAACATTTTCTTTCATCAATTTGAATAAAAGTGGCGCCGTGTATACCAACATTTTCGTCTTTCGTTTTTTTTtCTAGATGAAAAGTCAAAGAGCTACTTATCTGTTCTGGTTCTTTGAAATGCTAATCCAAATAGCTACCAGTCTTAACAAGTTCAAAAATTCTTCCAAAGTGAAACTCCTCAATATAAACAAACATAGAACAATTGAGTGAGAACATCTGAAGAGCCCAACCAAATTGGAAACTGTTGACATTAAGTGAGATATCAAAAACTCACAGAAAGAGAAGAAAGGAGAAACAACACCTAAAACTACAACAACCGTTGGTAGATTCACTAAGGGGTGTTTGGCAACCAACAAATTATTAAGGGGAGTTGAGTTGAGTTGGTATACTTTACAAACTCAATGTTTGGCCCACCAACTTTAAATGTTGGTCGGGTTGAGTTGGCTATTTTACCAACTTAACTCAACTCACCCCAAAGTCTTTCCAGTTCTTTATTCCTCCAATGTTTCTAATAGCTCCACTTATTGACCATTGTCGGCAACTACCTCTACCACACTTTGGTAACATACTCCAACAACCACCTTTGATGACCAATTTCGACAACCACATTCGCATAAGCAACTCCAACGACATACTTTGACTTCCACCTTTGACCAACTTTGACAACCAATTCTGGGCTCTGCCAACCACTCTGATGACAATTTATTGCAACTAACTCCAACGACTACCTTTGCACAAGCAACTTTGGCGAATTATTCTAACTTCTACTTGTGCAACCAACTCTGGGCTTTGCCAATCACCTTCGACGACTACCTTTCTACAAGCAACTTTGGTGACATATTCGGAATTCCACTTTCGCGCGGCTAACTTCGATGGCTAACTCCAGCCTCTGCCAACCACTTTTGACGAAAACCACCTTGGTTGATGAAACTTCAATGACCACCACCTCTAATAACCAACACTAACGTTCACTCAGGGGATTAACTCTGGTGATGCTATGTCTAATGAAACCCTTAATGCCAACCCTAGTTTTGTGCATGCTCAACTCATACGTTCTACAAAACATTAAAGTATAAATAATAGTATTTTGTCTACGTCAAATGCAATATTTGTATGTAGAGAAGGGTGATTATAATAAAAAAaGACTGCAACTTTCTTAACTTTTTTGCTTTTCACTTATGACTTTTATTTTTAAGTTCATATAAAAGTGGTTACTAAAAGAAAGACTGTACTAGAAAATGTACTCTTTTTtCCTTTCTTTTATAATAAATTAGATATTGCATTGATGTGGTTTCATCATCTTCTTTTAGATTACATATGTACCTTAAGTCAAGGATTAGGGGACACACCAGAGCATCTCAACGGGCATCTCAACTAGGTTGACACTCCTTTAACGTCCTCATCATGTCCATACAATACTAGTAGAATATAAGATTCAATAATAAAGTACATTAGGGTAATAGATAGGAGAAAAAGGCAGATAAGAGCTTAATGTACTGATTTGGAGATAAAACACAAATCCAAATAACTTTAAAGGTAAAAGCCGACCAATTCAAACAAAAATCCTGAATAGAGTATGCTCTAAACTCCTTGTTTAGCGTGCACCAAGCGGCTGCATTTCTTTATGCAATGTCCATTCGACCTGACCAAACCATGAAATTCTTACTCCACCATTTCACTTATCAATGAATAATAAATCAACTTAACTCTTTTTTGAAAGGCAAACAAGTTTTGATTGAGTTCTTACTCCACCATTTCTCTTATCAATGAAATTGTCTCTCTTCCAAAAGGGGAAAAaAaTCTAAGCTTTTCATTTGTACTGAAATCCTTTCTTTTTAAGGACCTTATCGTGAAATTTCCAATCCACATGATCATAAACCTTCTCAAACTCAAAGATACCTCCTATTTTTTACCTCTATAATCCTTGATAGCATTGTTAGCAATGAGAACCTGAACTAAGATTTGTTTCCCCCCAATTAAGGTAATCTGAGCCTTAAAGATTGGCGACAGGAGAACCTTTTTCAGTCTTTTAGCCAACACTTAAGATATAATCATATGCACACTCATAACTAGACTGATGGACTTAAAATCCCAACCCTATTCATTTTTCCATTTTGGTAATGAGATGAACAAAAATTTCATTTAGAAAACTTTCCAAGATGTCCCTGTTGAAGAACTCTCTAAAATCCCACTCAAAACCATCCTTAATGTTCTCCTATTTATCCTAGAAAAAGGTCAAAGAGAGTCCATAAGGATCAAGGGGCTTGTTCCTATCAAAGTGAACAACTGCATTCTTGATTTCTGCCAACAAAAAAaGGGAGTCCAACTCAGTCTGCCCACTCTAATAGGACATTTGTCACACCATTCTAGATCTTCAACAAAGAGTTTGAGAACCACATCCAGGGCATAGAGGGCCTAGGCAAAAAGATGGAATCTCCTCCTCGACCTCCTTCTCCTCCCTATCTTTCTCCCCTCTATCGTTCTCCAAGGAACCAATGAAGTTCTTGTTTTCTATACCATTCGCCAATCTATGGAAGTAAGTAGAATTGCAGTTCTTGTTCTTATCCCTCTCACTTTAGCTGATATTCTCTATACTTGCTACTTTGCAATGAACAAGATTGTCGAATTGTAGTTATCAAAACCGTTTTCTGCCTTAGATGCTGCCACCAGACAGTCCCTAATCCAAGCAACTGTTACTAGGTCCAACTCCAATCTCTCAGTCCCAAACCTTTAACCCACCACTCTCTTCTAACTACACCACACCTTTCTCCCACACACCATTTCGTCGATGTCCACCATCTTCACGCTTCCCTTTACTGGTTACATTTTTGGAAAGGGGGAGGGCATTTTCCTTATTGAAAAAAaTGAAAATACAGTGTATACCAACTTGGACGAAGTAGTTTTCTTTCAGACTTCTTCTCAAGCATATTTAACCTATTACAAGAAGGTGCCTAGAACCCCCCTCCcTCCCTCCACTCATTTTTCGAATAGTCATTGGTACTTGTTTCTATTTAAAAGTTATGATACCCTAAACCCTTCTGAATATAGTTTTAAAAGTTTGGTGGAAGGGTCTTTTTTGTGATATGACTCCAGACATTATTATAGAGACTTAACTTATTTTTTACTCTGTTTTGCAGTTTTATAGCTTTCTTTTCTTTCAATGGTGAGATGGAAGAGAACACTAACAGTTTGTTGCACATCACTATCATCATTATTAGGTTCATGACTTTGGCTTCTTTCGCTATGACCCTGGTGCAATTCAATTTCTTAATTATGAGGAGATTCCCCTGGCTCCCGAGGCTGCCTGTGTTGGACTTGAGATTAGGGTTGTTGGTAATGATAGTGGGGAGAAGGTACAGTCACATTGTTTTTCCctCTtaCCcTaaaaaaaAAAAAAAAAAGAAAaGAAAGGAAAAAaaGAAaGTTTtGTTTTAGTCCcATTTTATCTTTCTTATTGCTAAACTATGCTGAAGTGATTTTCTCGCATATGTTCCAAATAAAAaTTCAATTCTTCATTATTTAGTATGCAATCTTTGTATTATTTTGAGAGGTTAAATGTGACAGTGGACTTATTAGATTACTTCACTCAAGTTGGCATTTTTGGTGCTCCTATCATGTGCAAATACCAATTTATAGATTCAAACCCAGTAGGGTTAGGAGTTCTTATGCACGGACAAATTTGTGATAAGATCCAAGCATCTTGAAATATATATATATATATTTTGATAAGAAACAGTTGATTAGCATTCTCTTAATTTtTTTTtCGCCATAAAAGTATCTTTTGGGTAAAAAATGTTGAAATATAAAAGATAACAAAATTAAAATATAGTGCTAAGTATTTAAGATACTTCGAAACTCCTCCTTCTTGAGCATACTAACTCAATCCATAGTCTAATTAAACAATTGCGCTCCTATCATTATCTGCACCAATAAAGTACACATCTTATCTCTAAAGTCTGTGTGCATTTGTCTGTTTTTTTtGGATAATAAATGGAGGGAATATTAGAATGACCAAAAAGGCCACAAAGAACAACCTGGGGGCCGGGTAGAGAAAACCTCCTCCTAATAAGCTATATACATTGAGGGCCTTCCAATCATTTAGGATTAGAAGAAAGTTGTGATTATAAAAGAGGATAGTTTCAAACGTACCGAGAAACTTAACCTTAGCCTTGCAGTATTTTGTAATATAAATGTTGTTGGAACGGGGCCTTGGCTTGGGAGGTCTCAATAACAAAAATATGCACTTCTAGCTAAATGGGATTTGAGATTTATGGAGGAAGAAGATTCATTTAGGTACCCAACCTAACAATGAAATACTCAAGAACACAGGAAGAACTCAAGAACACAGGAAGAACTCAAGAACAATCAAATATGACAATATATGAAAATATATTGAAATGCAAGCTATGATATCACAAGAACAAGTAACCCCTAGCCTTTCGAGAGGGCTTGACTTTCACCAAATTCCCACTCAAGGAATTTACTACAGAACTCTTTATTTCTTGCTCTCCACAGCCCACCCAAAGCCTCTATTTATAACGAAAACCCTAACCACCTTATTAACTAATTACTAATATGCCCCTTCTAATAACAATACTAATATTCTCCTAATAACTCTAACTAGGTCCCTTACAGATTCTTTATGAAGACAAGTCATAAGAAGCATTCATGGTAAAGAACCTTTTAATTGGCACACTATTGGAAAATTTGGAAATAGTTTGAGAAGTCCTTGGATCAATATTTCAAGAGCTTGGAGAAAGATGGAAGCCTTGGCTTTCTCCAAGCTTGGAAATGGTACTAGAATTGCCTTTTGGACTAACTTGTGGGTCGAATGCCAACGGAGGTTTTGAATTTTAGAACTTCTTTAAATCATTTAAAAAaTTCTTCCTGCTATTCAGTTGTTCTCTAACTTACCCGTTAAATTATTTGGTTGCATCGCTTATGTTCATAATCCCAATCCTATCATGCTAAACTTAACCTTCAGGCTGTTAAAATGCATTCTTGTAGGCTGTCTCCCATAAGAAGGCCTGAAAATGTTTTGACCCCTTGACCAAACAGTATTTTGAGAGTATGAATGTATCTTTTTTtATTTTTTtGGAAAATCAACCTTTTTAGCCAAAATTCTCTCTAGGGGGAGCCACTTAACCTTGAAGATAATTTTTGGGACACCACACTATCCCAAACATCATTGATTCCTATTTGATGCCAAGTATGGAGAGTTCTTCTTCAGGGGGAGAAACATTATAGACTGACTTGACAAGTAAAAAACCTGAACTACGGGTTTATACTATAAGAGACTTGACTCAAAGGAATTGAGAACGGGCAGTTGATCTATCATATAACCAATCTAATACCCTAATAAGTGATTCTGAAGATCCAGGTAATGTACATTCTCCTTTTACTTCTTCTAATTCTCCCACTTCTTCTTCTTATAATCCTTGCCTGATGTTTCTAATCTTGATATTCCAATTGCCCATAGGAAAGGAAATGTGTCAAATATCCCATTATAAACTTTCTTATGATAAATTGTTTGACAGTCATAAAGCCTTCACATCCAAAATAACCAACCTGTTTGTTCCAAGGAATATACATGCGGCATTAAATGATTTGAATTGGAAATTAGCAGTGATGGAAGAGATGAATCACTGAAACAAAATTGCCCATGGGACATAGTTGAACTACCAAAAGAAAAGAAAACAGTTGGATACAAGTTGGTGTTCATGGTAAAATGTAAAGTTGATGGCAGTATTGAAAGGTACAAGGCCAGATTGGTTCCTAAGGGGCTTGCTCAAATCTATGGAGTTGATTATCAAGAAACATTGGCTCTAGTTGCTAAAATCAATTCTATTAGAATTTTGTTGTCTGTCGCAATTAATTTTGATTGACCTCTTTATCAACGGGATGTTAAGAATGCTTTTCTCATTGGAGAAATGGAAGAAGCGCTATTTATGGACTTGTCACCTAGTTTTGAGGTAGATCTCGAGATTAACAAAGTGTGCAAGTTAAAGAAATCACTATACCGTTTTAAATAGTCTCCTACAGCCTGGTTTGAACGCTTTGAAAAAGTAGTCACGAGCTATGGATTTAGTCAATGTCAAGCCGATCATACGATGTTGTACAAACATACATGAAATGACAAGGTTGTTGGTTTGATAGTTTGTGTTGATGATATCATTCTTAAAGGCAGTGATGAGACGTAACTAACTTTTGTGAAGAAAAAGTTAGCACATGATTTCCAAATCAAAGACCTAGGAACTTTAAAGTACTTCCTAGGCATGGAGTTTGCCAGGTCCAAAAGTGGCATTCTTTCCAACCAAAGTAAGTATGTTCTTGATTTGCTAAAAGAGAGGTATACCTGAGTGTAAGGTAGTAGAAACTTCCGTTGAGCAGAATCTGAAATTGGAAGCTTCAACTAAGAATGAAATAAAGAAAaGAAAaAaGTACCGGAAACTTGTGGGGAGACTCATGTATCTTTCTCACACACGTCTTGATGTCGCTTTTGTAGTTAATATGGTAAGTTAGTTCATGCATGCACCTGGCCCTCTCACTTTGATGCAATTTATAGAATCCTAAGATATTTGAAAGGTACTTCAGGAAAAGGCTTATTGTTTCAAAGAAATGACCATCTCAATGTTGAAGTATATACTGATGCTGATTTGACAGGTAGCACGACTTATAGAATATCCACTTCTGGATACTGCTCCTTTAGTTGAGGAAACCTTGTTACTTGGCAAAGTGAAAAACAAAGTGTGATTGCAAGAAGTAGAGCAGAAGCGGAATTTAGAGCTTTAGTCCATGATATTTGTGAGGGTATATGGATAAGAAGATTGTTGGAAGAATTGAGATTTACTCAAACAATGCCATGCACATTTTCTGTGATAACGAGGCAGCAATTTCCATTGCCCACAATCCGGTCCTTCATGACAGGACAAAACATATTGAAGTCGATAAATACTTTATAAAGAAAAAGATCGATGTGGGAGTAATATGCATACGTATCTTCTAAAAACAAAATAAATTGCAAATGTGTTAACTAAAACCCTTCCAAAGTGGCAATTCAAAAAATTGATTGACAAGCTGGCCATGACTGATTTCTTCAAACTAGCTTAAGGGAGAGTGTTGATTATTTCCTTTCTTGTATTATATTTTATTGTATTATAATTGCCAAATTTATTTTTtCCTTCTATGTAATGGGTTGTTCTTCTATTTAAGACAACCCTTCTCTCTTTGTGAAATATACAAGAAATATATTATTTTGGCATGGACTCTTTTGTAGGTACACATGATCTGTAAATATCATAGGTTCATATTAACCAACATATTACAGAAAAAGAGAGTGGTAGATAGAGGGAGAAACTACCAGAACCATTACATCCATAATGATTCTTTATTCTTAATAGTTAATTATGTTTTAAGCTTTTAATTTAACATATCATTATTTCTGAACTTCATTTATATCCATAATGATCCTTAATGAATTCCCATTGCAAGATAATTCCATTTTTTtGTGTGTTTTTGCCAATTGAGTCTCAATAATTTTACAGGTTTCTATCTTAGCCGGTACCCTTGCTCGGCTGGATCGGGAGGCTCCTCACTATAAGAAGTATGTTGTGCACATCTAATTGTAGTTTTCATAAATTACTTTTTCCAGGCTGTTATATTCACTTCAAATGTTGACATCAAATATATTATCCTGGTATTATTATACATCTTTATTTTTtATTTTATGTTATGAATTTGTAGTAGATCAATCACTTCTATTTTAGATTTTGATAGGAATATAAAAAAAaTTAACATAAACTCAAGCCATATAAAAAaTATATTTACAATTTTAGACATTTTTAATCTTATTTTGTTAATGTAATATTTTTtCCCTAAAAAGATGGGATTTTTAGACTTATTATGGGGAATTAAGTTTCTGGGTTTACTATTTGGTGCATTATTTATAATTTTCTTTGAAAAATAACAATATTCAAAAGGGACACTAATTATTAACTTTGTAACAACGTGTATGTTAGTCCCATTTAATTTGTTCAATGTAGAAAGTTAGATTTCTTATTAAAAAaCAGTGTGTATGTTAATAGGCCTTTATATTTATATCTTTTTCTGCTCCTTTGCCCCATATAATGTCTGGAATATGAACACTAGGCTCTTCAATGACAAACAAAAGATCTTTGACATCTAGCCCCATATGTATGCAAGTGATTGATGTTTTTTTTTtGTAACTCTTTTGATGTATGGGTTTTTTCGCTTCCCTGGTCCTTTGGCACGTTCTCCTTATGAGCCAATTAAAGTTTTTGTTTCTTTTAAGAAAGAAGTGAAATCTGGAATAGAAGTAGCTCCTGTTCATTTTCCTCTTACGTTCTATTGTTCTTTTTGAAATCTGAAAGAAGCTTTTTTtCTCTTTTCCTTTTCCTTTTtCTCCCCGGATAAATTCATTATTAGCATGATGCTATTTCAATTTTGGACCCAAGTTTATCCTATTTTTTTtATAGTTTTtCTGTTTGTTGTCTGACCTCTAGCCTGCTCTTTGTCAGATCTATTAAATATTTTTTCGTTCTAGTAGCATGACAATTGTTTTTATGCTTGTTGCAGAGATGGATATAATGATTTCAACACATTCTACATGCAAGTGAGTGATTTAACATTTTGTACGTCAATAAATCTTTTTTGTCTTTTATTAGAACCGATTAGAAGATTGCCCCTATGGTTAAAGCTTGTGCAAGTTTTCTTCCCAGATTTTGAAGATTGGTTTTCTGAAGTATGTTTAGTTGGTTTAGAAGTTTATCCTTCGCTATTTTGCCTTCTAGTAAGGCTTTTATCTAAGGTTCAGGCGAGTCAATCATGTTTTGATTTCACTTCCAAGCTTCATGTTTTATTTCATTAGTTTAGTGGAAAAGTCTTGTTTCCGTTTAGAAAAAaCAATTTCCAAGCCTCAAAGCTCTATTTCTTTTGAGGTTCAAGTTTTGCCCTCTGCTGGATGTCTCTTCAGTTGGATAACCTTCTTTTGAAACAGAGACAAGCCTCTTTATTGATAATAAATGAGACTAATGCTCAAATGACAAGAGTATTATACTAAGAGAAGAATAAGAAAGAAGGGAAAGCAAAGTTCTTGTTTCCGTTCCAAAAaAAAAAaaaGAGAAGAATAAGAAAAGACAAAAATCATCCAAATAAACTAAACAATGATGAACCCGGGCAATACAAAAGGGAAAGCGACCAACAAACGATCACAAAGAAGAAACAACGAAAGAACCAAAGACACAAAGAGTTGAGACATTAG

mRNA sequence

ATGGCTGATCCTTCCGAAGGCCTGGGTTCAGAATCGGCGGCAATTGGAATCGACTCCACCACCAAGGACGACCTTTGCATGGAGATCGACCCACCTTTCCGCGAGAATTTGGCCACTGCTGATGACTGGAGGAAAGCCCTGAACAAGGTTGTTCCTGCCGTCATTGTGTTGCGCACCACCGCCTGTCGGGCATTCGACACTGAATCGGCTGGTGCGAGCTATGCTACTGGATTCGTTGTTGATAAGCGCCGTGGGATTATCCTCACCAACCGTCATGTTGTTAAGCCAGatgaatcactgaaacaaaattgcccatgggacatagttgaactaccaaaagaaaagaaaacagttggatacaagttggtgttcatggtaaaatgtaaagttgatggcagtattgaaaggtacaaggccagattggttcctaaggggcttgctcaaatctatggagttgattatcaagaaacattggctctagttgctaaaatcaattctattagaattttgttgtctaaaaagttagcacatgatttccaaatcaaagacctaggaactttaaagtacttcctaggcatggagtttgccaggtccaaaagtggcattctttccaaccaaagtatacctgagtgtaaggtagtagaaacttccgttgagcagaatctgaaattggaagcttcaactaagaatgaaataaagaaaagaaaaaagtaccggaaacttgtggggagactcatgtatctttctcacacacgtcttgatgtcgcttttgtagttaatatgatttactcaaacaatgccatgcacattttctgtgataacgaggcagcaatttccattgcccacaatccggtccttcatgacaggacaaaacatattgaagtcgataaatactttataaagaaaaagatcgatagaagaataagaaaagacaaaaaTCATCCAAATAAACTAAACAATGATGAACCCGGGCAATACAAAAGGGAAAGCGACCAACAAACGATCACAAAGAAGAAACAACGAAAGAACCAAAGACACAAAGAGTTGAGACATTAG

Coding sequence (CDS)

ATGGCTGATCCTTCCGAAGGCCTGGGTTCAGAATCGGCGGCAATTGGAATCGACTCCACCACCAAGGACGACCTTTGCATGGAGATCGACCCACCTTTCCGCGAGAATTTGGCCACTGCTGATGACTGGAGGAAAGCCCTGAACAAGGTTGTTCCTGCCGTCATTGTGTTGCGCACCACCGCCTGTCGGGCATTCGACACTGAATCGGCTGGTGCGAGCTATGCTACTGGATTCGTTGTTGATAAGCGCCGTGGGATTATCCTCACCAACCGTCATGTTGTTAAGCCAGATGAATCACTGAAACAAAATTGCCCATGGGACATAGTTGAACTACCAAAAGAAAAGAAAACAGTTGGATACAAGTTGGTGTTCATGGTAAAATGTAAAGTTGATGGCAGTATTGAAAGGTACAAGGCCAGATTGGTTCCTAAGGGGCTTGCTCAAATCTATGGAGTTGATTATCAAGAAACATTGGCTCTAGTTGCTAAAATCAATTCTATTAGAATTTTGTTGTCTAAAAAGTTAGCACATGATTTCCAAATCAAAGACCTAGGAACTTTAAAGTACTTCCTAGGCATGGAGTTTGCCAGGTCCAAAAGTGGCATTCTTTCCAACCAAAGTATACCTGAGTGTAAGGTAGTAGAAACTTCCGTTGAGCAGAATCTGAAATTGGAAGCTTCAACTAAGAATGAAATAAAGAAAaGAAAaAaGTACCGGAAACTTGTGGGGAGACTCATGTATCTTTCTCACACACGTCTTGATGTCGCTTTTGTAGTTAATATGATTTACTCAAACAATGCCATGCACATTTTCTGTGATAACGAGGCAGCAATTTCCATTGCCCACAATCCGGTCCTTCATGACAGGACAAAACATATTGAAGTCGATAAATACTTTATAAAGAAAAAGATCGATAGAAGAATAAGAAAAGACAAAAATCATCCAAATAAACTAAACAATGATGAACCCGGGCAATACAAAAGGGAAAGCGACCAACAAACGATCACAAAGAAGAAACAACGAAAGAACCAAAGACACAAAGAGTTGAGACATTAG

Protein sequence

MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTTACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKPDESLKQNCPWDIVELPKEKKTVGYKLVFMVKCKVDGSIERYKARLVPKGLAQIYGVDYQETLALVAKINSIRILLSKKLAHDFQIKDLGTLKYFLGMEFARSKSGILSNQSIPECKVVETSVEQNLKLEASTKNEIKKRKKYRKLVGRLMYLSHTRLDVAFVVNMIYSNNAMHIFCDNEAAISIAHNPVLHDRTKHIEVDKYFIKKKIDRRIRKDKNHPNKLNNDEPGQYKRESDQQTITKKKQRKNQRHKELRH*

Homology

[Close]

BLAST of Cucsa.012630 vs. Swiss-Prot
Match: DEGP7_ARATH (Protease Do-like 7 OS=Arabidopsis thaliana GN=DEGP7 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.9e-35
Identity = 73/96 (76.04%), Postives = 85/96 (88.54%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          M DP E LGS+ A++  +S  K+DLC+EIDPP  E++ATA+DWR+AL KVVPAV+VLRTT
Sbjct: 1  MGDPLERLGSQ-ASMATESVMKEDLCLEIDPPLTESVATAEDWRRALGKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGF+VDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFIVDKRRGIILTNRHVVKP 95

[Close]

BLAST of Cucsa.012630 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 70.1 bits (170), Expect = 5.5e-11
Identity = 63/198 (31.82%), Postives = 93/198 (46.97%), Query Frame = 1


Query: 3    DPSEGLGSESAA----IGIDSTTKDDLCMEIDPPFRENLATA-----DDWRKALNKVVPA 62
            +P+E   SE+A     IGID+ TK+D  +EI     E L T      ++   +LNKVV  
Sbjct: 824  NPNESRESETAEHLKEIGIDNPTKND-GIEIINRRSERLKTKPQISYNEEDNSLNKVVLN 883

Query: 63   VIVLRTTACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKPDESLKQNCPWDIVELPK 122
               +      +FD           +  DK       N  +     + K N  W I + P+
Sbjct: 884  AHTIFNDVPNSFDEIQ--------YRDDKSSWEEAINTEL----NAHKINNTWTITKRPE 943

Query: 123  EKKTVGYKLVFMVKCKVDGSIERYKARLVPKGLAQIYGVDYQETLALVAKINSIRILLSK 182
             K  V  + VF VK    G+  RYKARLV +G  Q Y +DY+ET A VA+I+S R +LS 
Sbjct: 944  NKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSL 1003

Query: 183  KLAHDFQIKDLGTLKYFL 192
             + ++ ++  +     FL
Sbjct: 1004 VIQYNLKVHQMDVKTAFL 1008

HSP 2 Score: 42.0 bits (97), Expect = 1.6e-02
Identity = 16/43 (37.21%), Postives = 28/43 (65.12%), Query Frame = 1


Query: 266  NAMHIFCDNEAAISIAHNPVLHDRTKHIEVDKYFIKKKIDRRI 309
            N + I+ DN+  ISIA+NP  H R KHI++  +F ++++   +
Sbjct: 1324 NPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNV 1366

[Close]

BLAST of Cucsa.012630 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.4e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 1


Query: 98  ESLKQNCPWDIVELPKEKKTVGYKLVFMVKCKVDGSIERYKARLVPKGLAQIYGVDYQET 157
           ESL++N  + +VELPK K+ +  K VF +K   D  + RYKARLV KG  Q  G+D+ E 
Sbjct: 835 ESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEI 894

Query: 158 LALVAKINSIRILLSKKLAHDFQIKDLGTLKYFL 192
            + V K+ SIR +LS   + D +++ L     FL
Sbjct: 895 FSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFL 928

HSP 2 Score: 40.4 bits (93), Expect = 4.7e-02
Identity = 14/36 (38.89%), Postives = 28/36 (77.78%), Query Frame = 1


Query: 270  IFCDNEAAISIAHNPVLHDRTKHIEVDKYFIKKKID 306
            ++CD+++AI ++ N + H RTKHI+V  ++I++ +D
Sbjct: 1253 VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVD 1288

HSP 3 Score: 39.3 bits (90), Expect = 1.0e-01
Identity = 35/129 (27.13%), Postives = 55/129 (42.64%), Query Frame = 1


Query: 154  YQETLALVAKINSIRILLSKKLAHDFQIKDLGTLKYFLGMEFARSKSG------------ 213
            Y + + +V K   +   L   L+  F +KDLG  +  LGM+  R ++             
Sbjct: 1008 YVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIE 1067

Query: 214  -ILSNQSIPECKVVETSVEQNLKLE----ASTKNEIKKRKK--YRKLVGRLMY-LSHTRL 263
             +L   ++   K V T +  +LKL      +T  E     K  Y   VG LMY +  TR 
Sbjct: 1068 RVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRP 1127

[Close]

BLAST of Cucsa.012630 vs. Swiss-Prot
Match: NM111_PICGU (Pro-apoptotic serine protease NMA111 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=NMA111 PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 6.1e-10
Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 1


Query: 14  AIGIDSTTKDDLCME--IDPPFRENLATADDWRKALNKVVPAVIVLRTTACRAFDTESAG 73
           A G D+   DD   E  + P           W+K + KVV +V+ ++ +    FDTES+ 
Sbjct: 37  ANGEDNEDIDDYSSEGEMSPQLENYFPQTTSWQKTITKVVKSVVSIQFSHVSNFDTESSA 96

Query: 74  ASYATGFVVDKRRGIILTNRHVVKP 97
            S ATGFVVD  RG ILTNRHVV P
Sbjct: 97  VSEATGFVVDSERGYILTNRHVVGP 121

[Close]

BLAST of Cucsa.012630 vs. Swiss-Prot
Match: NM111_VANPO (Pro-apoptotic serine protease NMA111 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NMA111 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.0e-10
Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 1


Query: 1   MADPSEGLGSESAAIGIDSTTKDDLCM--EIDPPFRENLATADD------WRKALNKVVP 60
           +++ SEG   E+ A   +S T D++ M  E+D     N+++  D      W+  + KVV 
Sbjct: 12  LSEVSEGSDPEAPAKTRNSYTTDEIVMVEEVDSEIPVNISSYGDAETYLKWQNTIAKVVK 71

Query: 61  AVIVLRTTACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
           +V+ +  +    FD+++A  S ATGFVVD   GIILTNRHVV P
Sbjct: 72  SVVSIHFSQVAPFDSDNAVVSQATGFVVDASLGIILTNRHVVGP 115

[Close]

BLAST of Cucsa.012630 vs. TrEMBL
Match: A0A0A0L781_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346140 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.8e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT
Sbjct: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 96

[Close]

BLAST of Cucsa.012630 vs. TrEMBL
Match: A0A067JIK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02490 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37
Identity = 78/96 (81.25%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          M DP E LGSE+   G+++  K+DLCMEIDPPF+EN+ATA+DWR+ALNKVVPAV+VLRTT
Sbjct: 1  MGDPLERLGSETEVAGLETKLKEDLCMEIDPPFKENVATAEDWRRALNKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 96

[Close]

BLAST of Cucsa.012630 vs. TrEMBL
Match: A0A061EG47_THECC (DegP protease 7 isoform 1 OS=Theobroma cacao GN=TCM_019222 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37
Identity = 80/96 (83.33%), Postives = 90/96 (93.75%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          M DP E LGSE+A +G++ST K++LCMEIDPPF+EN+ATA+DWRKALNKVVPAV+VLRTT
Sbjct: 1  MGDPLERLGSETA-MGLESTIKEELCMEIDPPFKENVATAEDWRKALNKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTE AGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTEPAGASYATGFVVDKRRGIILTNRHVVKP 95

[Close]

BLAST of Cucsa.012630 vs. TrEMBL
Match: B9T3Z6_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0336750 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.3e-37
Identity = 81/96 (84.38%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          M DP E LGSE+A   I+S+ K+DLCMEIDPPF+EN ATA+DWRKALNKVVPAV+VLRTT
Sbjct: 1  MGDPLERLGSETA---IESSMKEDLCMEIDPPFKENAATAEDWRKALNKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 93

[Close]

BLAST of Cucsa.012630 vs. TrEMBL
Match: M5X9U1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000531mg PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.1e-37
Identity = 81/96 (84.38%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          M DP E LGSE  AIG++S+ KDDL MEIDPPF+EN ATADDWRKAL+KVVPAV+VLRTT
Sbjct: 1  MGDPLERLGSE--AIGLESSIKDDLSMEIDPPFKENTATADDWRKALSKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTE+AGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTEAAGASYATGFVVDKRRGIILTNRHVVKP 94

[Close]

BLAST of Cucsa.012630 vs. TAIR10
Match: AT3G03380.1 (AT3G03380.1 DegP protease 7)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-36
Identity = 73/96 (76.04%), Postives = 85/96 (88.54%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          M DP E LGS+ A++  +S  K+DLC+EIDPP  E++ATA+DWR+AL KVVPAV+VLRTT
Sbjct: 1  MGDPLERLGSQ-ASMATESVMKEDLCLEIDPPLTESVATAEDWRRALGKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGF+VDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFIVDKRRGIILTNRHVVKP 95

[Close]

BLAST of Cucsa.012630 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-14
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 1


Query: 106 WDIVELPKEKKTVGYKLVFMVKCKVDGSIERYKARLVPKGLAQIYGVDYQETLALVAKIN 165
           W+I  LP  KK +G K V+ +K   DG+IERYKARLV KG  Q  G+D+ ET + V K+ 
Sbjct: 115 WEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLT 174

Query: 166 SIRILLSKKLAHDFQIKDLGTLKYFL 192
           S++++L+    ++F +  L     FL
Sbjct: 175 SVKLILAISAIYNFTLHQLDISNAFL 200

HSP 2 Score: 74.7 bits (182), Expect = 1.3e-13
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 1


Query: 171 LSKKLAHDFQIKDLGTLKYFLGMEFARSKSGI-----------LSNQSIPECKVVETSVE 230
           L  +L   F+++DLG LKYFLG+E ARS +GI           L    +  CK     ++
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359

Query: 231 QNLKLEASTKNEIKKRKKYRKLVGRLMYLSHTRLDVAFVVNMIYSNNAMHIFCDNEAAIS 283
            ++   A +  +    K YR+L+GRLMYL  TRLD++F VN +   +        +A + 
Sbjct: 360 PSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMK 419

HSP 3 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 1


Query: 270 IFCDNEAAISIAHNPVLHDRTKHIEVDKYFIKKK 304
           +FCDN AAI IA N V H+RTKHIE D + ++++
Sbjct: 521 LFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554

[Close]

BLAST of Cucsa.012630 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-07
Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 1


Query: 98  ESLKQNCPWDIVELPKEKKTVGYKLVFMVKCKVDGSIERYKARLVPKGLAQIYGVDYQET 157
           ++L +N  W +V  P  +  +G K VF  K   DG+++R KARLV KG  Q  G+ + ET
Sbjct: 49  DALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVET 108

Query: 158 LALVAKINSIRILLS 173
            + V +  +IR +L+
Sbjct: 109 YSPVVRTATIRTILN 123

[Close]

BLAST of Cucsa.012630 vs. NCBI nr
Match: gi|449464156|ref|XP_004149795.1| (PREDICTED: protease Do-like 7 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 4.0e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT
Sbjct: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 96

[Close]

BLAST of Cucsa.012630 vs. NCBI nr
Match: gi|700202707|gb|KGN57840.1| (hypothetical protein Csa_3G346140 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 4.0e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT
Sbjct: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 96

[Close]

BLAST of Cucsa.012630 vs. NCBI nr
Match: gi|659114476|ref|XP_008457070.1| (PREDICTED: protease Do-like 7 isoform X1 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 7.6e-45
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          MADPSEGLGS+SAAIGI STTKDDLCMEIDPPFRENLATADDWRKALNKVVPAV+VLRTT
Sbjct: 1  MADPSEGLGSDSAAIGIHSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 96

[Close]

BLAST of Cucsa.012630 vs. NCBI nr
Match: gi|659114478|ref|XP_008457071.1| (PREDICTED: protease Do-like 7 isoform X2 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 7.6e-45
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 1


Query: 1  MADPSEGLGSESAAIGIDSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVIVLRTT 60
          MADPSEGLGS+SAAIGI STTKDDLCMEIDPPFRENLATADDWRKALNKVVPAV+VLRTT
Sbjct: 1  MADPSEGLGSDSAAIGIHSTTKDDLCMEIDPPFRENLATADDWRKALNKVVPAVVVLRTT 60

Query: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 97
          ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP
Sbjct: 61 ACRAFDTESAGASYATGFVVDKRRGIILTNRHVVKP 96

[Close]

BLAST of Cucsa.012630 vs. NCBI nr
Match: gi|703151920|ref|XP_010110245.1| (ABC transporter C family member 2 [Morus notabilis])

HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 100/221 (45.25%), Postives = 133/221 (60.18%), Query Frame = 1


Query: 99  SLKQNCPWDIVELPKEKKTVGYKLVFMVKCKVDGSIERYKARLVPKGLAQIYGVDYQETL 158
           +L++N  W+IVELP +KKTVG K VF VK   DGS+ RYKARLV KG  Q YG+DY+ET 
Sbjct: 75  ALEKNGTWEIVELPSKKKTVGCKWVFTVKFNADGSVNRYKARLVAKGFTQAYGIDYKETF 134

Query: 159 ALVAKINSIRILLSKKLAHDFQIKDLGTLKYFLG--MEFARSKSG------------ILS 218
           A VAK+NS+R            +K+ G  +      + +  SK G            +L 
Sbjct: 135 APVAKLNSVRSPREWFEKFTQAVKEWGFTQAQSDHTIFYKHSKDGKKAILIVKYVLDLLQ 194

Query: 219 NQSIPECKVVETSVEQNLKLEASTKNEIKKRKKYRKLVGRLMYLSHTRLDVAFVVNMIYS 278
              +  CK  ET +E N KL      EI  +++Y +LVG+L+YLSHTR D+AF       
Sbjct: 195 ETDMLGCKPAETPMEPNAKLGLEGGKEI-DQEQYHRLVGKLIYLSHTRPDIAFA------ 254

Query: 279 NNAMHIFCDNEAAISIAHNPVLHDRTKHIEVDKYFIKKKID 306
                ++CDN+AA+SIAHNPV HDR KH+EVD++FIK+KID
Sbjct: 255 -----LYCDNKAAVSIAHNPVHHDRMKHVEVDRHFIKEKID 283

The following BLAST results are available for this feature:

BLAST of Cucsa.012630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEGP7_ARATH	1.9e-35	76.04	Protease Do-like 7 OS=Arabidopsis thaliana GN=DEGP7 PE=2 SV=1	[more]
COPIA_DROME	5.5e-11	31.82	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
POLX_TOBAC	9.4e-11	41.49	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
NM111_PICGU	6.1e-10	43.53	Pro-apoptotic serine protease NMA111 OS=Meyerozyma guilliermondii (strain ATCC 6...	[more]
NM111_VANPO	8.0e-10	38.46	Pro-apoptotic serine protease NMA111 OS=Vanderwaltozyma polyspora (strain ATCC 2...	[more]

BLAST of Cucsa.012630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L781_CUCSA	2.8e-46	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346140 PE=4 SV=1	[more]
A0A067JIK0_JATCU	1.1e-37	81.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02490 PE=4 SV=1	[more]
A0A061EG47_THECC	1.8e-37	83.33	DegP protease 7 isoform 1 OS=Theobroma cacao GN=TCM_019222 PE=4 SV=1	[more]
B9T3Z6_RICCO	5.3e-37	84.38	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0336750 PE=4 SV=1	[more]
M5X9U1_PRUPE	9.1e-37	84.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000531mg PE=4 SV=1	[more]

BLAST of Cucsa.012630 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03380.1	1.1e-36	76.04	DegP protease 7	[more]
AT4G23160.1	9.7e-14	41.86	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	3.0e-07	37.33	ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

BLAST of Cucsa.012630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464156\|ref\|XP_004149795.1\|	4.0e-46	100.00	PREDICTED: protease Do-like 7 [Cucumis sativus]	[more]
gi\|700202707\|gb\|KGN57840.1\|	4.0e-46	100.00	hypothetical protein Csa_3G346140 [Cucumis sativus]	[more]
gi\|659114476\|ref\|XP_008457070.1\|	7.6e-45	96.88	PREDICTED: protease Do-like 7 isoform X1 [Cucumis melo]	[more]
gi\|659114478\|ref\|XP_008457071.1\|	7.6e-45	96.88	PREDICTED: protease Do-like 7 isoform X2 [Cucumis melo]	[more]
gi\|703151920\|ref\|XP_010110245.1\|	1.3e-39	45.25	ABC transporter C family member 2 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009003	Peptidase_S1_PA
IPR013103	RVT_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010205	photoinhibition
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.012630.1	Cucsa.012630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009003	Peptidase S1, PA clan	unknown	SSF50494	Trypsin-like serine proteases	coord: 42..101 score: 1.2
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 104..172 score: 4.3
None	No IPR available	GENE3D	G3DSA:2.40.10.10		coord: 38..101 score: 3.
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 98..262 score: 1.4
None	No IPR available	PANTHER	PTHR11439:SF185	SUBFAMILY NOT NAMED	coord: 98..262 score: 1.4
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 135..294 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.012630	Cla013174	Watermelon (97103) v1	cgywmB367
Cucsa.012630	MELO3C020282	Melon (DHL92) v3.5.1	cgymeB343
Cucsa.012630	ClCG05G010970	Watermelon (Charleston Gray)	cgywcgB345
Cucsa.012630	CSPI03G21820	Wild cucumber (PI 183967)	cgycpiB299
Cucsa.012630	CmaCh01G003570	Cucurbita maxima (Rimu)	cgycmaB0551
Cucsa.012630	CmoCh01G003730	Cucurbita moschata (Rifu)	cgycmoB0552
Cucsa.012630	Lsi05G003080	Bottle gourd (USVL1VR-Ls)	cgylsiB322
Cucsa.012630	Cp4.1LG02g16850	Cucurbita pepo (Zucchini)	cgycpeB0531
Cucsa.012630	MELO3C020288.2	Melon (DHL92) v3.6.1	cgymedB338
Cucsa.012630	CsaV3_3G021610	Cucumber (Chinese Long) v3	cgycucB303

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.012630	Cucurbita maxima (Rimu)	cgycmaB0548
Cucsa.012630	Cucurbita moschata (Rifu)	cgycmoB0549
Cucsa.012630	Cucumber (Chinese Long) v2	cgycuB290
Cucsa.012630	Cucurbita pepo (Zucchini)	cgycpeB0532
Cucsa.012630	Silver-seed gourd	carcgyB0859
Cucsa.012630	Watermelon (97103) v2	cgywmbB351
Cucsa.012630	Wax gourd	cgywgoB393