Cucsa.012530 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ttttgagttggcaaatGCTCAAaCAATGTTtACGAcTTGATGAaCAAAaTGTTtAATGATCTCTTAGACACTTTCGTGATTGTATTTATTGACGATATCTTAATTtATtCCAAGACAGGGATAACACATGAGGAGCATTTAGCATGGTTTTAGAGGATCTTCGAGTCAACGAATTGTATGTAAAGTTTTCAAAATGTGAGTTTTGGATAAGGCCGAGTATCTTTCCAAACCATGTGATATCTAGAGATGACATTTATGTGGATCTCACAAAAGATTGAAGTCGTTACTAGTTGGCCTCGACCTTTCATAGtcAGTGAGGTTCGTAGTCTTTTtGGGTTttGCAGGTTATTACTAACGATTTGTATAAGacTTTtCTtGTATAGCTACTCCTTTGACTCAGTTAACTAAGAAACGGGACTCCGTTTGTTTGGGACAAAACCTATGAGGATAGTGTTCAGGATCTAAGCAGAAGCTTGTATAACTCCCGTGCTTGCCATACATGATGGTTCACAAAGTTTCGTAATTTATATTGATGCTTCTAGGAAAGTTTAGAAAGTGTTCTGATTCAACAAGTTAAAGTAGTTGCTTATGCTCCTCGTCAGTTGAAGAGTCATGAGGAAAATTATCCAACTTATGATATGGAATTGACAGTTGTGGTTTTTGCATTAACGATTAGAAGGAACTATTTGTATGATGAAAAGATATAGATATTTTGTAATAAAAAAAAaGGTCTAAACTACTTCTTCACTCAAAAGAAGCTGAGTATGAGATAGCAAAGATGGTTTGAATTAGTAAATGACTATGATTGTGAGATTTTGTACCATCTAGATAAGGAGAATTTTGTAGTTGATGATCTTCGTAGAAAAGTATCACATTTCGACAGCACTTATTACCAGACAGATTCCATTACACAAACACCGTGAGAGAGCTGAGATTGTAGTTTCAGTGGGAGAAGTCACCTCACAGTTAGCTCAGTTGTCAGTACAACCGACCTTGAGACAAAGAATTGTTGTTGTTCAGTTCATTAAACCTTATTTGATTGAGAAGCGTCACCTAGTAGAAGTAGGGAAAGGTAAGAAGTTCTCCATATCCTCTGATGGCGAACTTATGTTTGAGAAAGGATTATGTGAGCCAACAGACAAAGCAGTTAAGGTAGAATTATTGATTAAGGCTCATAGTTCCCCATTTTCCATGCATCTTGGTAGTACAAAATAA ttttgagttggcaaatgctcaaacaatgtttacgacttgatgaacaaaatgtttaatgatctcttagacactttcgtgattgtatttattgacgatatcttaatttattccaagacagggataacacatgaggagcatttagcatggttttagaggatcttcgagtcaacgaattgtatgtaaagttttcaaaatgtgagttttggataaggccgagtatctttccaaaccatgtgatatctagagatgacatttatgtggatctcacaaaagattgaagtcgttactagttggcctcgacctttcatagtcagtgaggttcgtagtctttttgggttttgcaggttattactaacgatttgtataagacttttcttgtatagctactcctttgactcagttaactaagaaacgggactccgtttgtttgggacaaaacctatgaggatagtgttcaggatctaagcagaagcttgtataactcccgtgcttgccatacatgatggttcacaaagtttcgtaatttatattgatgcttctaggaaagtttagaaagtgttctgattcaacaagttaaagtagttgcttatgctcctcgtcagttgaagagtcatgaggaaaattatccaacttatgatatggaattgacagttgtggtttttgcattaacgattagaaggaactatttgtatgatgaaaagatatagatattttgtaataaaaaaaaaggtctaaactacttcttcactcaaaagaagctgagtatgagatagcaaagatggtttgaattagtaaatgactatgattgtgagattttgtaccatctagataaggagaattttgtagttgatgatcttcgtagaaaagtatcacatttcgacagcacttattaccagacagattccattacacaaacaccgtgagagagctgagattgtagtttcagtgggagaagtcacctcacagttagctcagttgtcagtacaaccgaccttgagacaaagaattgttgttgttcagttcattaaaccttatttgattgagaagcgtcacctagtagaagtagggaaaggtaagaagttctccatatcctctgatggcgaacttatgtttgagaaaggattatgtgagccaacagacaaagcagttaaggtagaattattgattaaggctcatagttccccattttccatgcatcttggtagtacaaaataa ATGATCTTCGTAGAAAAGTATCACATTTCGACAGCACTTATTACCAGACAGATTCCATTACACAAACACCGTGAGAGAGCTGAGATTGTAGTTTCAGTGGGAGAAGTCACCTCACAGTTAGCTCAGTTGTCAGTACAACCGACCTTGAGACAAAGAATTGTTGTTGTTCAGTTCATTAAACCTTATTTGATTGAGAAGCGTCACCTAGTAGAAGTAGGGAAAGGTAAGAAGTTCTCCATATCCTCTGATGGCGAACTTATGTTTGAGAAAGGATTATGTGAGCCAACAGACAAAGCAGTTAAGGTAGAATTATTGATTAAGGCTCATAGTTCCCCATTTTCCATGCATCTTGGTAGTACAAAATAA MIFVEKYHISTALITRQIPLHKHRERAEIVVSVGEVTSQLAQLSVQPTLRQRIVVVQFIKPYLIEKRHLVEVGKGKKFSISSDGELMFEKGLCEPTDKAVKVELLIKAHSSPFSMHLGSTK*
BLAST of Cucsa.012530 vs. TrEMBL
Match: Q84KB0_CUCME (Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 6.8e-32 Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Cucsa.012530 vs. TrEMBL
Match: E5GCE2_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 3.5e-20 Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 1
BLAST of Cucsa.012530 vs. TrEMBL
Match: M5WLY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-07 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1
BLAST of Cucsa.012530 vs. TrEMBL
Match: M5XLP5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019121mg PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.4e-07 Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 1
BLAST of Cucsa.012530 vs. TrEMBL
Match: M5VK25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015000mg PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.9e-07 Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 1
BLAST of Cucsa.012530 vs. NCBI nr
Match: gi|28558781|gb|AAO45752.1| (pol protein [Cucumis melo subsp. melo]) HSP 1 Score: 144.8 bits (364), Expect = 9.8e-32 Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Cucsa.012530 vs. NCBI nr
Match: gi|659123320|ref|XP_008461603.1| (PREDICTED: uncharacterized protein LOC103500166 [Cucumis melo]) HSP 1 Score: 129.4 bits (324), Expect = 4.2e-27 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 1
BLAST of Cucsa.012530 vs. NCBI nr
Match: gi|307136318|gb|ADN34141.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 105.9 bits (263), Expect = 5.0e-20 Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 1
BLAST of Cucsa.012530 vs. NCBI nr
Match: gi|659114282|ref|XP_008456990.1| (PREDICTED: uncharacterized protein LOC103496779 [Cucumis melo]) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 1
BLAST of Cucsa.012530 vs. NCBI nr
Match: gi|778721994|ref|XP_011658388.1| (PREDICTED: uncharacterized protein LOC105435984 [Cucumis sativus]) HSP 1 Score: 103.2 bits (256), Expect = 3.3e-19 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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