Cucsa.011870 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.011870
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPhosphoinositide phosphatase family protein isoform 5
Locationscaffold00154 : 1256736 .. 1256955 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAGCATTCAAAAGATCCTTCTCAGATGGAAATATTCTTCATGAAAACTGCTCACCAGCATTATGTACAAACAGAAAGCTAGAAAAACATTCAAACTTAGTATTGTCTAAACAATCGCAAGGAGGCAGTGAGGTTCTGTCAGAATCGTCTCCAGAAATATCCACTTCTGGAAATGATATAGCATTCTCAAGGTTTGATACCACCATCTCATCTTTGTGA

mRNA sequence

GTCAGCATTCAAAAGATCCTTCTCAGATGGAAATATTCTTCATGAAAACTGCTCACCAGCATTATGTACAAACAGAAAGCTAGAAAAACATTCAAACTTAGTATTGTCTAAACAATCGCAAGGAGGCAGTGAGGTTCTGTCAGAATCGTCTCCAGAAATATCCACTTCTGGAAATGATATAGCATTCTCAAGGTTTGATACCACCATCTCATCTTTGTGA

Coding sequence (CDS)

GTCAGCATTCAAAAGATCCTTCTCAGATGGAAATATTCTTCATGAAAACTGCTCACCAGCATTATGTACAAACAGAAAGCTAGAAAAACATTCAAACTTAGTATTGTCTAAACAATCGCAAGGAGGCAGTGAGGTTCTGTCAGAATCGTCTCCAGAAATATCCACTTCTGGAAATGATATAGCATTCTCAAGGTTTGATACCACCATCTCATCTTTGTGA

Protein sequence

SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDIAFSRFDTTISSL*
Homology
[Close]
BLAST of Cucsa.011870 vs. TrEMBL
Match: D7TC94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00440 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-12
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKR +SDGNIL E+ SPA  TN K EK SN VL  +SQGGS+VLSESSPEISTS +D+
Sbjct: 637 SFFKRCYSDGNILCESSSPAQETNVKQEKLSNSVLPNRSQGGSKVLSESSPEISTSESDM 696

Query: 61  AFSRF 66
           A +R+
Sbjct: 697 ALARY 701

[Close]
BLAST of Cucsa.011870 vs. TrEMBL
Match: A0A061GM31_THECC (Phosphoinositide phosphatase family protein isoform 2 OS=Theobroma cacao GN=TCM_037461 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKRSFSDGNIL +  SP   TN K EK +N  +  +SQGGS  LS+SSPEIST  +DI
Sbjct: 644 SLFKRSFSDGNILRQTGSPMSATNDKQEKFTNSTMPDRSQGGSNGLSDSSPEISTCESDI 703

Query: 61  AFSR 65
           ++SR
Sbjct: 704 SYSR 707

[Close]
BLAST of Cucsa.011870 vs. TrEMBL
Match: A0A061GKX8_THECC (Phosphoinositide phosphatase family protein isoform 1 OS=Theobroma cacao GN=TCM_037461 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKRSFSDGNIL +  SP   TN K EK +N  +  +SQGGS  LS+SSPEIST  +DI
Sbjct: 644 SLFKRSFSDGNILRQTGSPMSATNDKQEKFTNSTMPDRSQGGSNGLSDSSPEISTCESDI 703

Query: 61  AFSR 65
           ++SR
Sbjct: 704 SYSR 707

[Close]
BLAST of Cucsa.011870 vs. TrEMBL
Match: A0A061GK02_THECC (Phosphoinositide phosphatase family protein isoform 5 (Fragment) OS=Theobroma cacao GN=TCM_037461 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKRSFSDGNIL +  SP   TN K EK +N  +  +SQGGS  LS+SSPEIST  +DI
Sbjct: 644 SLFKRSFSDGNILRQTGSPMSATNDKQEKFTNSTMPDRSQGGSNGLSDSSPEISTCESDI 703

Query: 61  AFSR 65
           ++SR
Sbjct: 704 SYSR 707

[Close]
BLAST of Cucsa.011870 vs. TrEMBL
Match: A0A061GLB4_THECC (Phosphoinositide phosphatase family protein isoform 3 OS=Theobroma cacao GN=TCM_037461 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKRSFSDGNIL +  SP   TN K EK +N  +  +SQGGS  LS+SSPEIST  +DI
Sbjct: 644 SLFKRSFSDGNILRQTGSPMSATNDKQEKFTNSTMPDRSQGGSNGLSDSSPEISTCESDI 703

Query: 61  AFSR 65
           ++SR
Sbjct: 704 SYSR 707

[Close]
BLAST of Cucsa.011870 vs. NCBI nr
Match: gi|778703838|ref|XP_011655440.1| (PREDICTED: phosphoinositide phosphatase SAC3 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-27
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI
Sbjct: 664 SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 723

Query: 61  AFSRF 66
           AFSR+
Sbjct: 724 AFSRY 728

[Close]
BLAST of Cucsa.011870 vs. NCBI nr
Match: gi|659121243|ref|XP_008460561.1| (PREDICTED: LOW QUALITY PROTEIN: phosphoinositide phosphatase SAC3 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-23
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           SAFKRS SDGNILHENCSPAL TNR+LEKHSN VLSKQSQGGSEVLSESSPEISTS +DI
Sbjct: 664 SAFKRSLSDGNILHENCSPALSTNRRLEKHSNSVLSKQSQGGSEVLSESSPEISTSRSDI 723

Query: 61  AFSRF 66
           AFSR+
Sbjct: 724 AFSRY 728

[Close]
BLAST of Cucsa.011870 vs. NCBI nr
Match: gi|225444607|ref|XP_002277404.1| (PREDICTED: phosphoinositide phosphatase SAC3 [Vitis vinifera])

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-12
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKR +SDGNIL E+ SPA  TN K EK SN VL  +SQGGS+VLSESSPEISTS +D+
Sbjct: 637 SFFKRCYSDGNILCESSSPAQETNVKQEKLSNSVLPNRSQGGSKVLSESSPEISTSESDM 696

Query: 61  AFSRF 66
           A +R+
Sbjct: 697 ALARY 701

[Close]
BLAST of Cucsa.011870 vs. NCBI nr
Match: gi|590574903|ref|XP_007012537.1| (Phosphoinositide phosphatase family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-10
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKRSFSDGNIL +  SP   TN K EK +N  +  +SQGGS  LS+SSPEIST  +DI
Sbjct: 644 SLFKRSFSDGNILRQTGSPMSATNDKQEKFTNSTMPDRSQGGSNGLSDSSPEISTCESDI 703

Query: 61  AFSR 65
           ++SR
Sbjct: 704 SYSR 707

[Close]
BLAST of Cucsa.011870 vs. NCBI nr
Match: gi|590574907|ref|XP_007012538.1| (Phosphoinositide phosphatase family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-10
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 1 

Query: 1   SAFKRSFSDGNILHENCSPALCTNRKLEKHSNLVLSKQSQGGSEVLSESSPEISTSGNDI 60
           S FKRSFSDGNIL +  SP   TN K EK +N  +  +SQGGS  LS+SSPEIST  +DI
Sbjct: 644 SLFKRSFSDGNILRQTGSPMSATNDKQEKFTNSTMPDRSQGGSNGLSDSSPEISTCESDI 703

Query: 61  AFSR 65
           ++SR
Sbjct: 704 SYSR 707

The following BLAST results are available for this feature:
BLAST of Cucsa.011870 vs. TrEMBL
Match NameE-valueIdentityDescription
D7TC94_VITVI2.1e-1266.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00440 PE=4 SV=... [more]
A0A061GM31_THECC1.2e-1059.38Phosphoinositide phosphatase family protein isoform 2 OS=Theobroma cacao GN=TCM_... [more]
A0A061GKX8_THECC1.2e-1059.38Phosphoinositide phosphatase family protein isoform 1 OS=Theobroma cacao GN=TCM_... [more]
A0A061GK02_THECC1.2e-1059.38Phosphoinositide phosphatase family protein isoform 5 (Fragment) OS=Theobroma ca... [more]
A0A061GLB4_THECC1.2e-1059.38Phosphoinositide phosphatase family protein isoform 3 OS=Theobroma cacao GN=TCM_... [more]
BLAST of Cucsa.011870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703838|ref|XP_011655440.1|1.1e-2798.46PREDICTED: phosphoinositide phosphatase SAC3 [Cucumis sativus][more]
gi|659121243|ref|XP_008460561.1|2.9e-2389.23PREDICTED: LOW QUALITY PROTEIN: phosphoinositide phosphatase SAC3 [Cucumis melo][more]
gi|225444607|ref|XP_002277404.1|3.0e-1266.15PREDICTED: phosphoinositide phosphatase SAC3 [Vitis vinifera][more]
gi|590574903|ref|XP_007012537.1|1.7e-1059.38Phosphoinositide phosphatase family protein isoform 1 [Theobroma cacao][more]
gi|590574907|ref|XP_007012538.1|1.7e-1059.38Phosphoinositide phosphatase family protein isoform 2 [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.011870.1Cucsa.011870.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.011870MELO3C022896Melon (DHL92) v3.5.1cgymeB339
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.011870Cucumber (Chinese Long) v3cgycucB300
Cucsa.011870Wild cucumber (PI 183967)cgycpiB296
Cucsa.011870Cucumber (Chinese Long) v2cgycuB286
Cucsa.011870Bottle gourd (USVL1VR-Ls)cgylsiB317