BLAST of Cucsa.011760 vs. Swiss-Prot
Match:
SMC4_ARATH (Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana GN=SMC4 PE=1 SV=1)
HSP 1 Score: 354.0 bits (907), Expect = 1.2e-96
Identity = 175/196 (89.29%), Postives = 185/196 (94.39%), Query Frame = 1
Query: 22 STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ 81
S TPRL+IKE+V+ NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ
Sbjct: 19 SGTPRLYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ 78
Query: 82 MRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSK 141
MRLNKVSELIHNSTNHQNL+SA VSV F+EI+DL++G YE VPGSDF+ITR AFRDNSSK
Sbjct: 79 MRLNKVSELIHNSTNHQNLDSAGVSVQFEEIIDLENGLYETVPGSDFMITRVAFRDNSSK 138
Query: 142 YYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLED 201
YYIN R+SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLED
Sbjct: 139 YYINERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLED 198
Query: 202 IIGTIKYVEMIDESNK 218
IIGT KYVE IDE NK
Sbjct: 199 IIGTNKYVEKIDELNK 214
BLAST of Cucsa.011760 vs. Swiss-Prot
Match:
SMC4_DICDI (Structural maintenance of chromosomes protein 4 OS=Dictyostelium discoideum GN=smc4 PE=3 SV=1)
HSP 1 Score: 250.8 bits (639), Expect = 1.4e-65
Identity = 131/208 (62.98%), Postives = 158/208 (75.96%), Query Frame = 1
Query: 16 NSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF 75
+S NG RL I +MV+ NFKSYAG Q VGPFHK FS+VVGPNGSGKSNVIDAMLFVF
Sbjct: 149 SSNNGIEK--RLMITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVIDAMLFVF 208
Query: 76 GKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDL-DDGAYEAVPGSDFVITRAA 135
G RAKQ+RLNK+SELIHNS NH+NL + VSVHFQEI+DL + YE V GS+FV+TR A
Sbjct: 209 GYRAKQIRLNKISELIHNSENHKNLTNGRVSVHFQEIIDLPGEDNYEVVKGSEFVVTRTA 268
Query: 136 -----FRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQG 195
+D SKYY+N++ ++ LK KG+DLDNNRFLILQGEVEQI++MKPK
Sbjct: 269 QKTGNNKDGVSKYYLNDKVVKLDDLKTILKDKGIDLDNNRFLILQGEVEQIAMMKPKGVH 328
Query: 196 PHDEGFLEYLEDIIGTIKYVEMIDESNK 218
P +EG LEYLEDIIG+ KY+ I+ ++K
Sbjct: 329 PGEEGLLEYLEDIIGSKKYLPDIEATSK 354
BLAST of Cucsa.011760 vs. Swiss-Prot
Match:
SMC4_YEAST (Structural maintenance of chromosomes protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMC4 PE=1 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 2.1e-61
Identity = 122/192 (63.54%), Postives = 149/192 (77.60%), Query Frame = 1
Query: 26 RLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLN 85
RLFI E+VL NFKSYAG+Q VGPFH SFSAVVGPNGSGKSNVID+MLFVFG RA +MR +
Sbjct: 153 RLFINELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKMRQD 212
Query: 86 KVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY---EAVPGSDFVITRAAFRDNSSKY 145
++S+LIH S +L+S SV+VHFQ ++D G E PG +ITR AF++NSSKY
Sbjct: 213 RLSDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPG--LIITRKAFKNNSSKY 272
Query: 146 YINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDI 205
YIN + S++TEVTK LK +G+DLD+ RFLILQGEVE I+ MKPKA+ D+G LEYLEDI
Sbjct: 273 YINEKESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKPKAEKESDDGLLEYLEDI 332
Query: 206 IGTIKYVEMIDE 215
IGT Y +I+E
Sbjct: 333 IGTANYKPLIEE 342
BLAST of Cucsa.011760 vs. Swiss-Prot
Match:
SMC4_XENLA (Structural maintenance of chromosomes protein 4 OS=Xenopus laevis GN=smc4 PE=1 SV=1)
HSP 1 Score: 231.5 bits (589), Expect = 8.9e-60
Identity = 113/201 (56.22%), Postives = 150/201 (74.63%), Query Frame = 1
Query: 12 PQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAM 71
P TN A PRL I +V NFKSYAGE+ +GPFHK FS ++GPNGSGKSNVID+M
Sbjct: 62 PPPPAMTNEAGA-PRLMITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSM 121
Query: 72 LFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVPGSDFVIT 131
LFVFG RA+++R K+S LIHNS H++++S +V VHFQ+I+D + +E +P S+F ++
Sbjct: 122 LFVFGYRAQKIRSKKLSVLIHNSDEHKDVQSCTVEVHFQKIIDKEGDDFEVIPNSNFYVS 181
Query: 132 RAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPH 191
R A++DNSS Y+I+ + + F +V L+ G+DLD+NRFLILQGEVEQI++MKPK Q H
Sbjct: 182 RTAYKDNSSVYHISGKKATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEH 241
Query: 192 DEGFLEYLEDIIGTIKYVEMI 213
DEG LEYLEDIIG+ + E I
Sbjct: 242 DEGMLEYLEDIIGSERLKEPI 261
BLAST of Cucsa.011760 vs. Swiss-Prot
Match:
SMC4_HUMAN (Structural maintenance of chromosomes protein 4 OS=Homo sapiens GN=SMC4 PE=1 SV=2)
HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59
Identity = 110/200 (55.00%), Postives = 147/200 (73.50%), Query Frame = 1
Query: 5 EPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGK 64
E ++ + P + + PRL I +V NFKSYAGE+ +GPFHK FS ++GPNGSGK
Sbjct: 60 EILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGK 119
Query: 65 SNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVP 124
SNVID+MLFVFG RA+++R K+S LIHNS H++++S +V VHFQ+I+D + YE +P
Sbjct: 120 SNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIP 179
Query: 125 GSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMK 184
S+F ++R A RDN+S Y+I+ + F +V L+ G+DLD+NRFLILQGEVEQI++MK
Sbjct: 180 NSNFYVSRTACRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMK 239
Query: 185 PKAQGPHDEGFLEYLEDIIG 205
PK Q HDEG LEYLEDIIG
Sbjct: 240 PKGQTEHDEGMLEYLEDIIG 259
BLAST of Cucsa.011760 vs. TrEMBL
Match:
A0A0A0KP68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532470 PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1
Query: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN
Sbjct: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
Query: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY
Sbjct: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
Query: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI
Sbjct: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
Query: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK
Sbjct: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 217
BLAST of Cucsa.011760 vs. TrEMBL
Match:
A0A068U3R5_COFCA (Structural maintenance of chromosomes protein OS=Coffea canephora GN=GSCOC_T00039567001 PE=3 SV=1)
HSP 1 Score: 372.5 bits (955), Expect = 3.6e-100
Identity = 188/217 (86.64%), Postives = 197/217 (90.78%), Query Frame = 1
Query: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
M S P D++ ++ST S TPRLFIKEMV+ +FKSYAGEQRVGPFHKSFSAVVGPN
Sbjct: 1 MESAAPDDEVAGTGSHSTQMGSRTPRLFIKEMVMRDFKSYAGEQRVGPFHKSFSAVVGPN 60
Query: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSVHFQEI+DLDDG Y
Sbjct: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGTY 120
Query: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
EAVPGSDFVITR AFRDNSSKYYIN+R SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI
Sbjct: 121 EAVPGSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
Query: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
SLMKPKAQGPHDEGFLEYLEDIIGT KYVE IDES K
Sbjct: 181 SLMKPKAQGPHDEGFLEYLEDIIGTNKYVEKIDESLK 217
BLAST of Cucsa.011760 vs. TrEMBL
Match:
A0A151RK13_CAJCA (Structural maintenance of chromosomes protein 4 (Fragment) OS=Cajanus cajan GN=KK1_035663 PE=4 SV=1)
HSP 1 Score: 370.5 bits (950), Expect = 1.4e-99
Identity = 186/212 (87.74%), Postives = 193/212 (91.04%), Query Frame = 1
Query: 6 PVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKS 65
P+D +S S+ PRLFIKEMV+ NFKSYAGEQRVGPFHKSFSAVVGPNGSGKS
Sbjct: 1 PMDPHAESAPDSATRGSSRPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKS 60
Query: 66 NVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVPG 125
NVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSVHFQEIVDLDDG YEAVPG
Sbjct: 61 NVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEAVPG 120
Query: 126 SDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKP 185
SDFVITR AFRDNSSKYYIN+R SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKP
Sbjct: 121 SDFVITRVAFRDNSSKYYINDRTSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKP 180
Query: 186 KAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
KAQGPHDEGFLEYLEDIIGT KYVE IDES+K
Sbjct: 181 KAQGPHDEGFLEYLEDIIGTNKYVEKIDESHK 212
BLAST of Cucsa.011760 vs. TrEMBL
Match:
D7SXB5_VITVI (Structural maintenance of chromosomes protein OS=Vitis vinifera GN=VIT_14s0108g00710 PE=3 SV=1)
HSP 1 Score: 369.4 bits (947), Expect = 3.0e-99
Identity = 185/214 (86.45%), Postives = 196/214 (91.59%), Query Frame = 1
Query: 4 TEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSG 63
T+P ++ + ++S G S PRLFIKEMV+ NFKSYAGEQRVGPFHKSFSAVVGPNGSG
Sbjct: 5 TKPPEESVSNGSDSGPGRSRAPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSG 64
Query: 64 KSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAV 123
KSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSVHFQEIVDLDDG YEAV
Sbjct: 65 KSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEAV 124
Query: 124 PGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLM 183
PGSDFVI R AF+DNSSKYYIN+R SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLM
Sbjct: 125 PGSDFVIARVAFQDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLM 184
Query: 184 KPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
KPKAQGPHDEGFLEYLEDIIGT KYVE IDES+K
Sbjct: 185 KPKAQGPHDEGFLEYLEDIIGTNKYVEKIDESHK 218
BLAST of Cucsa.011760 vs. TrEMBL
Match:
V7C2X7_PHAVU (Structural maintenance of chromosomes protein OS=Phaseolus vulgaris GN=PHAVU_004G029000g PE=3 SV=1)
HSP 1 Score: 367.1 bits (941), Expect = 1.5e-98
Identity = 183/202 (90.59%), Postives = 190/202 (94.06%), Query Frame = 1
Query: 16 NSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF 75
++T S PRLFIKEM++ NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF
Sbjct: 11 SATRHRSARPRLFIKEMIMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF 70
Query: 76 GKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAF 135
GKRAKQMRLNKVSELIHNSTNHQNLESA VSVHFQEIVDL+DG YEAVPGSDFVITR AF
Sbjct: 71 GKRAKQMRLNKVSELIHNSTNHQNLESAGVSVHFQEIVDLEDGTYEAVPGSDFVITRVAF 130
Query: 136 RDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGF 195
RDNSSKYYIN+RASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK+QGPHDEGF
Sbjct: 131 RDNSSKYYINDRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGF 190
Query: 196 LEYLEDIIGTIKYVEMIDESNK 218
LEYLEDIIGT KYVE IDES K
Sbjct: 191 LEYLEDIIGTNKYVEKIDESQK 212
BLAST of Cucsa.011760 vs. TAIR10
Match:
AT5G48600.2 (AT5G48600.2 structural maintenance of chromosome 3)
HSP 1 Score: 354.0 bits (907), Expect = 6.7e-98
Identity = 175/196 (89.29%), Postives = 185/196 (94.39%), Query Frame = 1
Query: 22 STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ 81
S TPRL+IKE+V+ NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ
Sbjct: 19 SGTPRLYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ 78
Query: 82 MRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSK 141
MRLNKVSELIHNSTNHQNL+SA VSV F+EI+DL++G YE VPGSDF+ITR AFRDNSSK
Sbjct: 79 MRLNKVSELIHNSTNHQNLDSAGVSVQFEEIIDLENGLYETVPGSDFMITRVAFRDNSSK 138
Query: 142 YYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLED 201
YYIN R+SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLED
Sbjct: 139 YYINERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLED 198
Query: 202 IIGTIKYVEMIDESNK 218
IIGT KYVE IDE NK
Sbjct: 199 IIGTNKYVEKIDELNK 214
BLAST of Cucsa.011760 vs. TAIR10
Match:
AT3G54670.3 (AT3G54670.3 Structural maintenance of chromosomes (SMC) family protein)
HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 1
Query: 21 ASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAK 80
A +P I ++ + NFKSY G Q VGPF K F+A++GPNGSGKSN++DA+ FV G R
Sbjct: 3 AIQSPSGKILQLEMENFKSYKGHQLVGPF-KDFTAIIGPNGSGKSNLMDAISFVLGVRTG 62
Query: 81 QMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSS 140
Q+R +++ +LI+ + + ++ E + + +DDG + TR+ S
Sbjct: 63 QLRGSQLKDLIY-AFDDRDKEQRGRKAFVRLVYQMDDGV-------ELRFTRSITSAGGS 122
Query: 141 KYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK 187
+Y I+NR N E KL+ G+ + FL+ QG+VE I+ PK
Sbjct: 123 EYRIDNRVVNLDEYNGKLRSLGILVKARNFLVFQGDVESIASKNPK 159
BLAST of Cucsa.011760 vs. TAIR10
Match:
AT5G62410.1 (AT5G62410.1 structural maintenance of chromosomes 2)
HSP 1 Score: 84.7 bits (208), Expect = 7.5e-17
Identity = 59/184 (32.07%), Postives = 90/184 (48.91%), Query Frame = 1
Query: 27 LFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 86
+ IKE+ L FKSYA V F F+A+ G NGSGKSN++D++ FV G +Q+R
Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60
Query: 87 KVSELIHNSTNHQNLESASVSVHFQEIV-DLDDGAYEAVPGSDFVITRAAFRDNSSKYYI 146
+ EL++ + A+VSV F YE P + +TR +KY I
Sbjct: 61 NLQELVYKQ-GQAGITKATVSVTFDNSERHRSPLGYEEHP--EITVTRQIVVGGRNKYLI 120
Query: 147 NNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG 206
N + + ++V ++++N FLI+QG + ++ MKP L LE+ G
Sbjct: 121 NGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPE-------ILSMLEEAAG 174
Query: 207 TIKY 209
T Y
Sbjct: 181 TRMY 174
BLAST of Cucsa.011760 vs. TAIR10
Match:
AT3G47460.1 (AT3G47460.1 Structural maintenance of chromosomes (SMC) family protein)
HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16
Identity = 57/183 (31.15%), Postives = 89/183 (48.63%), Query Frame = 1
Query: 27 LFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 86
+ IKE+ L FKSYA V F F+A+ G NGSGKSN++D++ FV G +Q+R
Sbjct: 1 MHIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60
Query: 87 KVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYIN 146
+ EL++ + A+VSV F + + S+ +TR +KY IN
Sbjct: 61 NLQELVYKQ-GQAGITRATVSVTFDN-SERNRSPLGHEDHSEITVTRQIVVGGKNKYLIN 120
Query: 147 NRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGT 206
+ + +V ++++N FLI+QG + ++ MKP L LE+ GT
Sbjct: 121 GKLAQPNQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPME-------ILSMLEEAAGT 174
Query: 207 IKY 209
Y
Sbjct: 181 RMY 174
BLAST of Cucsa.011760 vs. NCBI nr
Match:
gi|778703815|ref|XP_011655432.1| (PREDICTED: structural maintenance of chromosomes protein 4 [Cucumis sativus])
HSP 1 Score: 430.6 bits (1106), Expect = 1.6e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1
Query: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN
Sbjct: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
Query: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY
Sbjct: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
Query: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI
Sbjct: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
Query: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK
Sbjct: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 217
BLAST of Cucsa.011760 vs. NCBI nr
Match:
gi|700196238|gb|KGN51415.1| (hypothetical protein Csa_5G532470 [Cucumis sativus])
HSP 1 Score: 430.6 bits (1106), Expect = 1.6e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1
Query: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN
Sbjct: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
Query: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY
Sbjct: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
Query: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI
Sbjct: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
Query: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK
Sbjct: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 217
BLAST of Cucsa.011760 vs. NCBI nr
Match:
gi|659121263|ref|XP_008460572.1| (PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4 [Cucumis melo])
HSP 1 Score: 414.8 bits (1065), Expect = 9.0e-113
Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 1
Query: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
MVS+EPVDDLM +T +S NGAS PRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN
Sbjct: 1 MVSSEPVDDLMAETVDSINGASRAPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
Query: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY
Sbjct: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
Query: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI
Sbjct: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
Query: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK
Sbjct: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 217
BLAST of Cucsa.011760 vs. NCBI nr
Match:
gi|661893792|emb|CDP02233.1| (unnamed protein product [Coffea canephora])
HSP 1 Score: 372.5 bits (955), Expect = 5.1e-100
Identity = 188/217 (86.64%), Postives = 197/217 (90.78%), Query Frame = 1
Query: 1 MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN 60
M S P D++ ++ST S TPRLFIKEMV+ +FKSYAGEQRVGPFHKSFSAVVGPN
Sbjct: 1 MESAAPDDEVAGTGSHSTQMGSRTPRLFIKEMVMRDFKSYAGEQRVGPFHKSFSAVVGPN 60
Query: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY 120
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSVHFQEI+DLDDG Y
Sbjct: 61 GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGTY 120
Query: 121 EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
EAVPGSDFVITR AFRDNSSKYYIN+R SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI
Sbjct: 121 EAVPGSDFVITRVAFRDNSSKYYINDRGSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI 180
Query: 181 SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
SLMKPKAQGPHDEGFLEYLEDIIGT KYVE IDES K
Sbjct: 181 SLMKPKAQGPHDEGFLEYLEDIIGTNKYVEKIDESLK 217
BLAST of Cucsa.011760 vs. NCBI nr
Match:
gi|802715260|ref|XP_012084705.1| (PREDICTED: structural maintenance of chromosomes protein 4 [Jatropha curcas])
HSP 1 Score: 371.3 bits (952), Expect = 1.1e-99
Identity = 188/215 (87.44%), Postives = 197/215 (91.63%), Query Frame = 1
Query: 5 EPVDDLMPQTANSTN--GASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGS 64
E D+ M +NS G+S PRLFIKEMV+ NFKSYAGEQRVGPFHKSFSAVVGPNGS
Sbjct: 4 ESADEFMASESNSVRAAGSSRGPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGS 63
Query: 65 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYEA 124
GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSVHFQEIVDLDDG YEA
Sbjct: 64 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGNYEA 123
Query: 125 VPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 184
VPGSDFVITR AFRDNSSKYYIN+R+SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL
Sbjct: 124 VPGSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 183
Query: 185 MKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNK 218
MKPKAQGPHDEGFLEYLEDIIGT KYVE I+ES+K
Sbjct: 184 MKPKAQGPHDEGFLEYLEDIIGTDKYVEKIEESSK 218
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
SMC4_ARATH | 1.2e-96 | 89.29 | Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana GN=SMC4 ... | [more] |
SMC4_DICDI | 1.4e-65 | 62.98 | Structural maintenance of chromosomes protein 4 OS=Dictyostelium discoideum GN=s... | [more] |
SMC4_YEAST | 2.1e-61 | 63.54 | Structural maintenance of chromosomes protein 4 OS=Saccharomyces cerevisiae (str... | [more] |
SMC4_XENLA | 8.9e-60 | 56.22 | Structural maintenance of chromosomes protein 4 OS=Xenopus laevis GN=smc4 PE=1 S... | [more] |
SMC4_HUMAN | 1.2e-59 | 55.00 | Structural maintenance of chromosomes protein 4 OS=Homo sapiens GN=SMC4 PE=1 SV=... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KP68_CUCSA | 1.1e-117 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532470 PE=4 SV=1 | [more] |
A0A068U3R5_COFCA | 3.6e-100 | 86.64 | Structural maintenance of chromosomes protein OS=Coffea canephora GN=GSCOC_T0003... | [more] |
A0A151RK13_CAJCA | 1.4e-99 | 87.74 | Structural maintenance of chromosomes protein 4 (Fragment) OS=Cajanus cajan GN=K... | [more] |
D7SXB5_VITVI | 3.0e-99 | 86.45 | Structural maintenance of chromosomes protein OS=Vitis vinifera GN=VIT_14s0108g0... | [more] |
V7C2X7_PHAVU | 1.5e-98 | 90.59 | Structural maintenance of chromosomes protein OS=Phaseolus vulgaris GN=PHAVU_004... | [more] |
Match Name | E-value | Identity | Description | |
AT5G48600.2 | 6.7e-98 | 89.29 | structural maintenance of chromosome 3 | [more] |
AT3G54670.3 | 5.4e-23 | 36.75 | Structural maintenance of chromosomes (SMC) family protein | [more] |
AT5G62410.1 | 7.5e-17 | 32.07 | structural maintenance of chromosomes 2 | [more] |
AT3G47460.1 | 1.7e-16 | 31.15 | Structural maintenance of chromosomes (SMC) family protein | [more] |