Cucsa.011750 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTAAGTCAAGCAAAAGGGGTGAGAATGTTCAATGGAATCCCAACATATACGGTGCAGATAACAAACCAATGTTCGAGCAATTGCATTATATACGATCTCCATCTCAAATGTGAATCCTTCAACTCTTCTAACTTAATAAATCCTCGCATCTTCAAGAGACTTGCGGTCGATGATTGTCTTGTCAACAATGGATTGTCAATTGGCTATGGAGAAACCCTTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCGATTTCCTCGTTTAAATGTAAAAATCTTATCATCCAAGTTTAA AAAATTAAGTCAAGCAAAAGGGGTGAGAATGTTCAATGGAATCCCAACATATACGGTGCAGATAACAAACCAATGTTCGAGCAATTGCATTATATACGATCTCCATCTCAAATGTGAATCCTTCAACTCTTCTAACTTAATAAATCCTCGCATCTTCAAGAGACTTGCGGTCGATGATTGTCTTGTCAACAATGGATTGTCAATTGGCTATGGAGAAACCCTTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCGATTTCCTCGTTTAAATGTAAAAATCTTATCATCCAAGTTTAA AAAATTAAGTCAAGCAAAAGGGGTGAGAATGTTCAATGGAATCCCAACATATACGGTGCAGATAACAAACCAATGTTCGAGCAATTGCATTATATACGATCTCCATCTCAAATGTGAATCCTTCAACTCTTCTAACTTAATAAATCCTCGCATCTTCAAGAGACTTGCGGTCGATGATTGTCTTGTCAACAATGGATTGTCAATTGGCTATGGAGAAACCCTTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCGATTTCCTCGTTTAAATGTAAAAATCTTATCATCCAAGTTTAA KLSQAKGVRMFNGIPTYTVQITNQCSSNCIIYDLHLKCESFNSSNLINPRIFKRLAVDDCLVNNGLSIGYGETLSFQYATTFMFPLSISSFKCKNLIIQV*
BLAST of Cucsa.011750 vs. Swiss-Prot
Match: TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of Cucsa.011750 vs. Swiss-Prot
Match: TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.2e-21 Identity = 43/82 (52.44%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of Cucsa.011750 vs. Swiss-Prot
Match: TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.8e-16 Identity = 35/83 (42.17%), Postives = 59/83 (71.08%), Query Frame = 1
BLAST of Cucsa.011750 vs. Swiss-Prot
Match: TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-15 Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of Cucsa.011750 vs. TrEMBL
Match: A0A0A0KL27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511090 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.4e-22 Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of Cucsa.011750 vs. TrEMBL
Match: A0A0A0LUG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051700 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.9e-22 Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 1
BLAST of Cucsa.011750 vs. TrEMBL
Match: B9HD45_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0006s01860g PE=4 SV=2) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-21 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of Cucsa.011750 vs. TrEMBL
Match: V4MEA8_EUTSA (Uncharacterized protein (Fragment) OS=Eutrema salsugineum GN=EUTSA_v10027160mg PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-21 Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 1
BLAST of Cucsa.011750 vs. TrEMBL
Match: M0TTT4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-21 Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of Cucsa.011750 vs. TAIR10
Match: AT4G24972.1 (AT4G24972.1 tapetum determinant 1) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-23 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of Cucsa.011750 vs. TAIR10
Match: AT1G32583.1 (AT1G32583.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22 Identity = 43/82 (52.44%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of Cucsa.011750 vs. TAIR10
Match: AT1G05835.1 (AT1G05835.1 PHD finger protein) HSP 1 Score: 50.4 bits (119), Expect = 7.3e-07 Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 1
BLAST of Cucsa.011750 vs. NCBI nr
Match: gi|449434404|ref|XP_004134986.1| (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.4e-22 Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of Cucsa.011750 vs. NCBI nr
Match: gi|778720136|ref|XP_011658115.1| (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.4e-22 Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of Cucsa.011750 vs. NCBI nr
Match: gi|659079120|ref|XP_008440086.1| (PREDICTED: uncharacterized protein LOC103484668 isoform X2 [Cucumis melo]) HSP 1 Score: 112.5 bits (280), Expect = 4.4e-22 Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = 1
BLAST of Cucsa.011750 vs. NCBI nr
Match: gi|659079118|ref|XP_008440085.1| (PREDICTED: uncharacterized protein LOC103484668 isoform X1 [Cucumis melo]) HSP 1 Score: 112.5 bits (280), Expect = 4.4e-22 Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = 1
BLAST of Cucsa.011750 vs. NCBI nr
Match: gi|694310334|ref|XP_009352447.1| (PREDICTED: uncharacterized protein LOC103943808 [Pyrus x bretschneideri]) HSP 1 Score: 112.1 bits (279), Expect = 5.8e-22 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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