Cucsa.001350 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGGATCATTACAAGGCGATTTGAGTTCCTCTGACCTCAACCATCCTTTTCTCTTTGAAGGAGAAAATTTTAAGAGGTGGAAACAAAAGATGCTGTTTTTtCTTACTTTGAAGAAGGTGGCTACCGCATGTACCTCTACAGAGCAAAAAATCTCAGACTCCAATCCATTTGAAGAGAAAGTCAAAACTCATATCGCGTGGACAGAGACCAATTTTATATGTAAGAATTTAATACTTAATGGTCTTACTAATGAGTTGTATGATTATTACAGCGTAATGTCTACCGCGAAAGAAGTTTGGGATGCGTTACAAAAGAAGTATGACATTGAGGAAGCTGGATCTAAGAAGTATGCAGAAAGTCGATACTTGCGTTATCAAATCACTAATGATAGATCAGTGGAAGGATCAATAGTATGTGATTTAAAAGATAACACATGAAATCATAAACGAAGATATGCCGCTTCACAATCAATTTCAAGTTGCGGTTATTATTGATAAATTACCTCCTCTGTGGAAGGATTTCAAAAATACTATAAGACACAAAACCAAGGAGTTCTCGCTGAAAAGTCTCATCACACAATTAAGGATTGAGGAAGAGGCGAGAAGACATGACCAAAAAGAAGAGGGGAACACAATTTCTAGAAAGAAGTCAAACGCAATGCTGAAACTAGATCTGAAGCCTAAAGGAAATAAAATAAAATGTGGATCCAACAAGCAAAGAAATTCGCAAAGACCCTAGTCCAGAAGTACAGTACAAATTATTTGCTACAATTGTAATAAGGCTTGGACACTTTAGCTAGAAATTGTAGAAACGTAAATTATCCTACTGCGTAGGCAAACCTGGTAGGAGATGAATATGTAGCTATGATTTCTGAAGTTAATTTCATTGGGGGATCAGAAGGTTGGTGGCTAGACACAGGTGCATCTCGCCATGTCAGTCATGACCTTAATTTATTTAGAAAGTATAATGAGATAAAGGATAAGAATATCCTTCTAGGAGATCATCACATGACTCAGGCGGCAGGCATTAAAAAAGTAGAACGGAAATTCACATCTGGCAAAATGCTTGTGTTAAAGGAAGTTCTTCACAGGACTGAAATTCGAAAGAATTTGATCTCTGGATATCTCCTCAACAAAGCTAGCTTCTTGTAAACTATAGGGTCATATTTATTTACTTTAACTAAGAACAATGTTTTGTGGGAAAGGGCTGCGTGACAGAAGGCATGTTTAAAGTAAATTTAGAAACGAATAAGAATTTAACTTTCGCTCACATGTTATCTTCTTTTAATGTTTGGCATGCTAGACTTTGTCATATTAATAAAAGACTAACTAGCAACATGAGTAGATTAAATCTCATACCTAAGTTATCTATGCATGAATTTGAGAAATGTGCATGTTGTAGTCAAGCTAAGATAACAAAAACCTCACATAAGTCTATAAATAGAGTAACAAAGCCTTTAGAATTAATACATTCTGACTTATGTGAATTTGATGGCACATTAACTAGGAACAGTAAAAGGTATGTAATAACCTTTATAGATGACTCTTCCGACTACACTTTTATTTATCTACTTAAAGATAAAAGTGATGCCTTTGACATGTTCAAGGTGTATGTAACTGAAATAGAGAATCAATTTAACAAAAGAATTAAGAGACTTCGTAGTGATAGAGGAACATAATATTATTTAGTTGCCTTCAATGAGTTTTATAACTCAAAAGGAATAATACATGAAAGTACTGCACCCTATTCTCCTGAAATGAATGGAAAAGCATAAAAGAAAAATAGAACACTAACGGAGTTAGTAGTTGCTATCTTACTTGAATCAGAAGCAACACCATCTTTGTGGGGTGAAATAATTAAGACTATTAATTATTTTCTTGATAGGATTCCTAAATCAAACAGTAAATCCTCGCCATGCAAAGTCCTTAAGAATAAAACACCAAACCTGTCTTATCTTAGAACTTGGGATTGTCTAGCCTATGTTAGAATACTTGATCCACAGAGAAGAAAATTAGCCAGTAGAGCTTACGAATTTGTTTTCATAGGATATGCTGAAAATAATAAGACCTATAAGTTCTATGACTTAGAAAACAAA atggccggatcattacaaggcgatttgagttcctctgacctcaaccatccttttctctttgaaggagaaaattttaagaggtggaaacaaaagatgctgttttttcttactttgaagaaggtggctaccgcatgtacctctacagagcaaaaaatctcagactccaatccatttgaagagaaagtcaaaactcatatcgcgtggacagagaccaattttatatgtaagaatttaatacttaatggtcttactaatgagttgtatgattattacagcgtaatgtctaccgcgaaagaagtttgggatgcgttacaaaagaagtatgacattgaggaagctggatctaagaagtatgcagaaagtcgatacttgcgttatcaaatcactaatgatagatcagtggaaggatcaatagtatatatgccgcttcacaatcaatttcaagttgcggttattattgataaattacctcctctgtggaaggatttcaaaaatactataagacacaaaaccaaggagttctcgctgaaaagtctcatcacacaattaaggattgaggaagaggcgagaagacatgaccaaaaagaagaggggaacacaatttctagaaagaagtcaaacgcaatgctgaaactagatctgaagcctaaaggaaataaaataaaatgttggtggctagacacaggtgcatctcgccatgtcagtcatgaccttaatttatttagaaagtataatgagataaaggataagaatatccttctaggagatcatcacatgactcaggcggcaggcattaaaaaagtagaacggaaattcacatctggcaaaatgcttgtgttaaaggaagttcttcacaggactgaaattcgaaagaatttgatctctggatatctcctcaacaaagctagcttcttactttgtcatattaataaaagactaactagcaacatgagtagattaaatctcatacctaagttatctatgcatgaatttgagaaatgtgcatgttgtagtcaagctaagataacaaaaacctcacataagtctataaatagagtaacaaagcctttagaattaatacattctgacttatgtgaatttgatggcacattaactaggaacagtaaaaggtatgtaataacctttatagatgactcttccgactacacttttatttatctacttaaagataaaagtgatgcctttgacatgttcaaggtgtataaaaatagaacactaacggagttagtagttgctatcttacttgaatcagaagcaacaccatctttgtggggtgaaataattaagactattaattattttcttgataggattcctaaatcaaacagtaaatcctcgccatgcaaagtccttaagaataaaacaccaaacctgtcttatcttagaacttgggattgtctagcctatgttagaatacttgatccacagagaagaaaattagccagtagagcttacgaatttgttttcataggatatgctgaaaataataagacctataagttctatgacttagaaaacaaa ATGGCCGGATCATTACAAGGCGATTTGAGTTCCTCTGACCTCAACCATCCTTTTCTCTTTGAAGGAGAAAATTTTAAGAGGTGGAAACAAAAGATGCTGTTTTTtCTTACTTTGAAGAAGGTGGCTACCGCATGTACCTCTACAGAGCAAAAAATCTCAGACTCCAATCCATTTGAAGAGAAAGTCAAAACTCATATCGCGTGGACAGAGACCAATTTTATATGTAAGAATTTAATACTTAATGGTCTTACTAATGAGTTGTATGATTATTACAGCGTAATGTCTACCGCGAAAGAAGTTTGGGATGCGTTACAAAAGAAGTATGACATTGAGGAAGCTGGATCTAAGAAGTATGCAGAAAGTCGATACTTGCGTTATCAAATCACTAATGATAGATCAGTGGAAGGATCAATAGTATATATGCCGCTTCACAATCAATTTCAAGTTGCGGTTATTATTGATAAATTACCTCCTCTGTGGAAGGATTTCAAAAATACTATAAGACACAAAACCAAGGAGTTCTCGCTGAAAAGTCTCATCACACAATTAAGGATTGAGGAAGAGGCGAGAAGACATGACCAAAAAGAAGAGGGGAACACAATTTCTAGAAAGAAGTCAAACGCAATGCTGAAACTAGATCTGAAGCCTAAAGGAAATAAAATAAAATGTTGGTGGCTAGACACAGGTGCATCTCGCCATGTCAGTCATGACCTTAATTTATTTAGAAAGTATAATGAGATAAAGGATAAGAATATCCTTCTAGGAGATCATCACATGACTCAGGCGGCAGGCATTAAAAAAGTAGAACGGAAATTCACATCTGGCAAAATGCTTGTGTTAAAGGAAGTTCTTCACAGGACTGAAATTCGAAAGAATTTGATCTCTGGATATCTCCTCAACAAAGCTAGCTTCTTACTTTGTCATATTAATAAAAGACTAACTAGCAACATGAGTAGATTAAATCTCATACCTAAGTTATCTATGCATGAATTTGAGAAATGTGCATGTTGTAGTCAAGCTAAGATAACAAAAACCTCACATAAGTCTATAAATAGAGTAACAAAGCCTTTAGAATTAATACATTCTGACTTATGTGAATTTGATGGCACATTAACTAGGAACAGTAAAAGGTATGTAATAACCTTTATAGATGACTCTTCCGACTACACTTTTATTTATCTACTTAAAGATAAAAGTGATGCCTTTGACATGTTCAAGGTGTATAAAAATAGAACACTAACGGAGTTAGTAGTTGCTATCTTACTTGAATCAGAAGCAACACCATCTTTGTGGGGTGAAATAATTAAGACTATTAATTATTTTCTTGATAGGATTCCTAAATCAAACAGTAAATCCTCGCCATGCAAAGTCCTTAAGAATAAAACACCAAACCTGTCTTATCTTAGAACTTGGGATTGTCTAGCCTATGTTAGAATACTTGATCCACAGAGAAGAAAATTAGCCAGTAGAGCTTACGAATTTGTTTTCATAGGATATGCTGAAAATAATAAGACCTATAAGTTCTATGACTTAGAAAACAAA MAGSLQGDLSSSDLNHPFLFEGENFKRWKQKMLFFLTLKKVATACTSTEQKISDSNPFEEKVKTHIAWTETNFICKNLILNGLTNELYDYYSVMSTAKEVWDALQKKYDIEEAGSKKYAESRYLRYQITNDRSVEGSIVYMPLHNQFQVAVIIDKLPPLWKDFKNTIRHKTKEFSLKSLITQLRIEEEARRHDQKEEGNTISRKKSNAMLKLDLKPKGNKIKCWWLDTGASRHVSHDLNLFRKYNEIKDKNILLGDHHMTQAAGIKKVERKFTSGKMLVLKEVLHRTEIRKNLISGYLLNKASFLLCHINKRLTSNMSRLNLIPKLSMHEFEKCACCSQAKITKTSHKSINRVTKPLELIHSDLCEFDGTLTRNSKRYVITFIDDSSDYTFIYLLKDKSDAFDMFKVYKNRTLTELVVAILLESEATPSLWGEIIKTINYFLDRIPKSNSKSSPCKVLKNKTPNLSYLRTWDCLAYVRILDPQRRKLASRAYEFVFIGYAENNKTYKFYDLENK
BLAST of Cucsa.001350 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 59.3 bits (142), Expect = 1.4e-07 Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = 1
HSP 2 Score: 58.5 bits (140), Expect = 2.4e-07 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 1
BLAST of Cucsa.001350 vs. TrEMBL
Match: A5B994_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023328 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73 Identity = 164/434 (37.79%), Postives = 247/434 (56.91%), Query Frame = 1
BLAST of Cucsa.001350 vs. TrEMBL
Match: Q7Y017_ORYSJ (Putative polyprotein, 3'-partial (Fragment) OS=Oryza sativa subsp. japonica GN=OJ1112_G08.22 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.3e-55 Identity = 169/571 (29.60%), Postives = 264/571 (46.23%), Query Frame = 1
BLAST of Cucsa.001350 vs. TrEMBL
Match: M5X570_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb012171mg PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.7e-53 Identity = 115/207 (55.56%), Postives = 144/207 (69.57%), Query Frame = 1
BLAST of Cucsa.001350 vs. TrEMBL
Match: A5CBN2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016964 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51 Identity = 125/348 (35.92%), Postives = 193/348 (55.46%), Query Frame = 1
BLAST of Cucsa.001350 vs. TrEMBL
Match: A5CBN2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016964 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 3.6e-26 Identity = 81/255 (31.76%), Postives = 123/255 (48.24%), Query Frame = 1
HSP 2 Score: 48.9 bits (115), Expect = 2.1e-02 Identity = 23/61 (37.70%), Postives = 33/61 (54.10%), Query Frame = 1
HSP 3 Score: 199.9 bits (507), Expect = 7.5e-48 Identity = 124/386 (32.12%), Postives = 187/386 (48.45%), Query Frame = 1
BLAST of Cucsa.001350 vs. NCBI nr
Match: gi|659123591|ref|XP_008461736.1| (PREDICTED: uncharacterized protein LOC103500269 [Cucumis melo]) HSP 1 Score: 285.0 bits (728), Expect = 2.5e-73 Identity = 151/234 (64.53%), Postives = 174/234 (74.36%), Query Frame = 1
BLAST of Cucsa.001350 vs. NCBI nr
Match: gi|147863092|emb|CAN82978.1| (hypothetical protein VITISV_023328 [Vitis vinifera]) HSP 1 Score: 284.3 bits (726), Expect = 4.3e-73 Identity = 164/434 (37.79%), Postives = 247/434 (56.91%), Query Frame = 1
BLAST of Cucsa.001350 vs. NCBI nr
Match: gi|571447932|ref|XP_006577615.1| (PREDICTED: uncharacterized protein LOC102665777 [Glycine max]) HSP 1 Score: 274.2 bits (700), Expect = 4.5e-70 Identity = 146/265 (55.09%), Postives = 185/265 (69.81%), Query Frame = 1
BLAST of Cucsa.001350 vs. NCBI nr
Match: gi|571447932|ref|XP_006577615.1| (PREDICTED: uncharacterized protein LOC102665777 [Glycine max]) HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19 Identity = 51/70 (72.86%), Postives = 57/70 (81.43%), Query Frame = 1
HSP 2 Score: 223.0 bits (567), Expect = 1.2e-54 Identity = 169/571 (29.60%), Postives = 264/571 (46.23%), Query Frame = 1
BLAST of Cucsa.001350 vs. NCBI nr
Match: gi|955304629|ref|XP_014634108.1| (PREDICTED: uncharacterized protein LOC106799690 [Glycine max]) HSP 1 Score: 221.9 bits (564), Expect = 2.6e-54 Identity = 115/203 (56.65%), Postives = 145/203 (71.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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