CsaV3_UNG232160 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_UNG232160
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	NAC domain-containing protein
Location	scaffold118 : 36533 .. 36922 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTGCTGCTGAGAATCGGGTTTCTAGGGAAGTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACTGATGAGGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGGTATGAGAAGAGCGTTGAAGTCATTGCGGACGTTGAAATTTACAAGTACGAACCCTGGGACTTACCTGGTCAGTTCTGCTTTTAATGGTCTGAATTATCTTTGCTGCTTCATTCTTTTCAATTCGTTTGGGTGTTTTTCCTTCCTGGTGTATGATTAGTGGTTTTTTTTTTCTTATTGTAATTAGCCAAGTCTATCATTCAATCAGATAATGAGTGGTTTTTCTTCTCCCTCGTGGAAAGAAGTACCCAAACG

mRNA sequence

ATGGCTGCTGCTGCTGAGAATCGGGTTTCTAGGGAAGTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACTGATGAGGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGGTATGAGAAGAGCGTTGAAGTCATTGCGGACGTTGAAATTTACAAGTACGAACCCTGGGACTTACCTGCCAAGTCTATCATTCAATCAGATAATGAGTGGTTTTTCTTCTCCCTCGTGGAAAGAAGTACCCAAACG

Coding sequence (CDS)

ATGGCTGCTGCTGCTGAGAATCGGGTTTCTAGGGAAGTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACTGATGAGGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGGTATGAGAAGAGCGTTGAAGTCATTGCGGACGTTGAAATTTACAAGTACGAACCCTGGGACTTACCTGCCAAGTCTATCATTCAATCAGATAATGAGTGGTTTTTCTTCTCCCTCGTGGAAAGAAGTACCCAAACG

Protein sequence

MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLPAKSIIQSDNEWFFFSLVERSTQT

Homology

[Close]

BLAST of CsaV3_UNG232160 vs. NCBI nr
Match: XP_004139589.1 (PREDICTED: protein NTM1-like 8 isoform X1 [Cucumis sativus] >XP_011654576.1 PREDICTED: protein NTM1-like 8 isoform X1 [Cucumis sativus] >KGN64961.1 hypothetical protein Csa_1G168870 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 4.5e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY
Sbjct: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60

Query: 61 KYEPWDLPAKSIIQSDNEWFFFS 84
          KYEPWDLPAKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPAKSIIQSDNEWFFFS 83

[Close]

BLAST of CsaV3_UNG232160 vs. NCBI nr
Match: XP_008463642.1 (PREDICTED: NAC domain-containing protein 89-like isoform X2 [Cucumis melo])

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAA AENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEG+EKSVEVIA+VEIY
Sbjct: 1  MAAGAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGHEKSVEVIAEVEIY 60

Query: 61 KYEPWDLPAKSIIQSDNEWFFFS 84
          KYEPWDLPAKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPAKSIIQSDNEWFFFS 83

[Close]

BLAST of CsaV3_UNG232160 vs. NCBI nr
Match: XP_022973141.1 (NAC domain-containing protein 89-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 157.1 bits (396), Expect = 2.8e-35
Identity = 76/83 (91.57%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAAA+EN VS+E+QLSMAVSSMFPGFRFSPTDEELISFYLKKKL+GYEKSVE+IA+VEIY
Sbjct: 1  MAAASENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60

Query: 61 KYEPWDLPAKSIIQSDNEWFFFS 84
          KYEPWDLPAKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPAKSIIQSDNEWFFFS 83

[Close]

BLAST of CsaV3_UNG232160 vs. NCBI nr
Match: XP_008463641.1 (PREDICTED: NAC domain-containing protein 89-like isoform X1 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 3.6e-35
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAA AENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEG+EKSVEVIA+VEIY
Sbjct: 1  MAAGAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGHEKSVEVIAEVEIY 60

Query: 61 KYEPWDLP-AKSIIQSDNEWFFFS 84
          KYEPWDLP AKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPVAKSIIQSDNEWFFFS 84

[Close]

BLAST of CsaV3_UNG232160 vs. NCBI nr
Match: XP_022927557.1 (NAC domain-containing protein 40-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 156.8 bits (395), Expect = 3.6e-35
Identity = 76/83 (91.57%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAA AEN VS+E+QLSMAVSSMFPGFRFSPTDEELISFYLKKKL+GYEKSVE+IA+VEIY
Sbjct: 1  MAAVAENGVSKELQLSMAVSSMFPGFRFSPTDEELISFYLKKKLDGYEKSVEIIAEVEIY 60

Query: 61 KYEPWDLPAKSIIQSDNEWFFFS 84
          KYEPWDLPAKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPAKSIIQSDNEWFFFS 83

[Close]

BLAST of CsaV3_UNG232160 vs. TAIR10
Match: AT5G22290.1 (NAC domain containing protein 89)

HSP 1 Score: 112.1 bits (279), Expect = 1.8e-25
Identity = 49/74 (66.22%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 9  VSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLP 68
          VS++   SM  S++FPGF+FSPTD ELIS+YLK+K++G E+SVEVI D+EIY +EPWDLP
Sbjct: 8  VSKDTAASMEASTVFPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLP 67

Query: 69 AKSIIQSDNEWFFF 83
           KSI++SD+EWFFF
Sbjct: 68 DKSIVKSDSEWFFF 81

[Close]

BLAST of CsaV3_UNG232160 vs. TAIR10
Match: AT2G27300.1 (NTM1-like 8)

HSP 1 Score: 111.3 bits (277), Expect = 3.1e-25
Identity = 48/74 (64.86%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 9  VSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLP 68
          +S+E ++S+AVS++FPGFRFSPTD ELIS+YL++K++G E SV VIA+VEIYK+EPWDLP
Sbjct: 1  MSKEAEMSIAVSALFPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLP 60

Query: 69 AKSIIQSDNEWFFF 83
           +S ++S+NEWF+F
Sbjct: 61 EESKLKSENEWFYF 74

[Close]

BLAST of CsaV3_UNG232160 vs. TAIR10
Match: AT3G44290.1 (NAC domain containing protein 60)

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-23
Identity = 45/65 (69.23%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 18 AVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLPAKSIIQSDN 77
          AV++ FPGF+FSPTD ELIS+YLK+K++G E+SVE+I +VEIY +EPWDLP KSI++SD+
Sbjct: 10 AVTTTFPGFKFSPTDIELISYYLKRKMDGLERSVEIIPEVEIYNFEPWDLPDKSIVKSDS 69

Query: 78 EWFFF 83
          EWFFF
Sbjct: 70 EWFFF 74

[Close]

BLAST of CsaV3_UNG232160 vs. TAIR10
Match: AT3G03200.1 (NAC domain containing protein 45)

HSP 1 Score: 93.6 bits (231), Expect = 6.8e-20
Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLPAKSIIQS- 76
          MA  S+ PGFRF PTDEELI++YLK+K+ G E  +EVIA+V++YK EPWDLP KS++ S 
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSK 60

Query: 77 DNEWFFFSLVER 88
          D EW+FFS  +R
Sbjct: 61 DQEWYFFSPRDR 72

[Close]

BLAST of CsaV3_UNG232160 vs. TAIR10
Match: AT5G17260.1 (NAC domain containing protein 86)

HSP 1 Score: 93.2 bits (230), Expect = 8.9e-20
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLPAKSIIQS- 76
          MA  S+ PGFRF PTDEELI++YLK+K+ G E  +E+I +V++YK EPWDLP KS+I S 
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSK 60

Query: 77 DNEWFFFSLVER 88
          D EWFFFS  +R
Sbjct: 61 DQEWFFFSPRDR 72

[Close]

BLAST of CsaV3_UNG232160 vs. Swiss-Prot
Match: sp|Q94F58|NAC89_ARATH (NAC domain-containing protein 89 OS=Arabidopsis thaliana OX=3702 GN=NAC089 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-24
Identity = 49/74 (66.22%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 9  VSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLP 68
          VS++   SM  S++FPGF+FSPTD ELIS+YLK+K++G E+SVEVI D+EIY +EPWDLP
Sbjct: 8  VSKDTAASMEASTVFPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLP 67

Query: 69 AKSIIQSDNEWFFF 83
           KSI++SD+EWFFF
Sbjct: 68 DKSIVKSDSEWFFF 81

[Close]

BLAST of CsaV3_UNG232160 vs. Swiss-Prot
Match: sp|Q9XIN7|NAC40_ARATH (NAC domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=NTL8 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.7e-24
Identity = 48/74 (64.86%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 9  VSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLP 68
          +S+E ++S+AVS++FPGFRFSPTD ELIS+YL++K++G E SV VIA+VEIYK+EPWDLP
Sbjct: 1  MSKEAEMSIAVSALFPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLP 60

Query: 69 AKSIIQSDNEWFFF 83
           +S ++S+NEWF+F
Sbjct: 61 EESKLKSENEWFYF 74

[Close]

BLAST of CsaV3_UNG232160 vs. Swiss-Prot
Match: sp|Q9LXL9|NAC60_ARATH (NAC domain-containing protein 60 OS=Arabidopsis thaliana OX=3702 GN=NAC60 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-22
Identity = 45/65 (69.23%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 18 AVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLPAKSIIQSDN 77
          AV++ FPGF+FSPTD ELIS+YLK+K++G E+SVE+I +VEIY +EPWDLP KSI++SD+
Sbjct: 10 AVTTTFPGFKFSPTDIELISYYLKRKMDGLERSVEIIPEVEIYNFEPWDLPDKSIVKSDS 69

Query: 78 EWFFF 83
          EWFFF
Sbjct: 70 EWFFF 74

[Close]

BLAST of CsaV3_UNG232160 vs. Swiss-Prot
Match: sp|A4VCM0|NAC45_ARATH (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-18
Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLPAKSIIQS- 76
          MA  S+ PGFRF PTDEELI++YLK+K+ G E  +EVIA+V++YK EPWDLP KS++ S 
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSK 60

Query: 77 DNEWFFFSLVER 88
          D EW+FFS  +R
Sbjct: 61 DQEWYFFSPRDR 72

[Close]

BLAST of CsaV3_UNG232160 vs. Swiss-Prot
Match: sp|Q9FFI5|NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-18
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 17 MAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWDLPAKSIIQS- 76
          MA  S+ PGFRF PTDEELI++YLK+K+ G E  +E+I +V++YK EPWDLP KS+I S 
Sbjct: 1  MAPVSLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSK 60

Query: 77 DNEWFFFSLVER 88
          D EWFFFS  +R
Sbjct: 61 DQEWFFFSPRDR 72

[Close]

BLAST of CsaV3_UNG232160 vs. TrEMBL
Match: tr|A0A0A0LYC3|A0A0A0LYC3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168870 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.0e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY
Sbjct: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60

Query: 61 KYEPWDLPAKSIIQSDNEWFFFS 84
          KYEPWDLPAKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPAKSIIQSDNEWFFFS 83

[Close]

BLAST of CsaV3_UNG232160 vs. TrEMBL
Match: tr|A0A1S3CJQ8|A0A1S3CJQ8_CUCME (NAC domain-containing protein 89-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501742 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.7e-37
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAA AENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEG+EKSVEVIA+VEIY
Sbjct: 1  MAAGAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGHEKSVEVIAEVEIY 60

Query: 61 KYEPWDLPAKSIIQSDNEWFFFS 84
          KYEPWDLPAKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPAKSIIQSDNEWFFFS 83

[Close]

BLAST of CsaV3_UNG232160 vs. TrEMBL
Match: tr|A0A1S3CJR1|A0A1S3CJR1_CUCME (NAC domain-containing protein 89-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501742 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-35
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1  MAAAAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIY 60
          MAA AENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEG+EKSVEVIA+VEIY
Sbjct: 1  MAAGAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGHEKSVEVIAEVEIY 60

Query: 61 KYEPWDLP-AKSIIQSDNEWFFFS 84
          KYEPWDLP AKSIIQSDNEWFFFS
Sbjct: 61 KYEPWDLPVAKSIIQSDNEWFFFS 84

[Close]

BLAST of CsaV3_UNG232160 vs. TrEMBL
Match: tr|F6HHD1|F6HHD1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00970 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-27
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 7  NRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWD 66
          + V RE QLS+A SSMFPGFRFSPTDEELIS YLKKK++G EKSVEVIA+VEI KYEPWD
Sbjct: 15 SEVPRETQLSIAASSMFPGFRFSPTDEELISHYLKKKIQGSEKSVEVIAEVEICKYEPWD 74

Query: 67 LPAKSIIQSDNEWFFFS 84
          LPAKSII+S+NEWFFFS
Sbjct: 75 LPAKSIIESENEWFFFS 91

[Close]

BLAST of CsaV3_UNG232160 vs. TrEMBL
Match: tr|A5BXG9|A5BXG9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_028424 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-27
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 7  NRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGYEKSVEVIADVEIYKYEPWD 66
          + V RE QLS+A SSMFPGFRFSPTDEELIS YLKKK++G EKSVEVIA+VEI KYEPWD
Sbjct: 15 SEVPRETQLSIAASSMFPGFRFSPTDEELISHYLKKKIQGSEKSVEVIAEVEICKYEPWD 74

Query: 67 LPAKSIIQSDNEWFFFS 84
          LPAKSII+S+NEWFFFS
Sbjct: 75 LPAKSIIESENEWFFFS 91

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG232160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139589.1	4.5e-38	100.00	PREDICTED: protein NTM1-like 8 isoform X1 [Cucumis sativus] >XP_011654576.1 PRED...	[more]
XP_008463642.1	1.5e-36	96.39	PREDICTED: NAC domain-containing protein 89-like isoform X2 [Cucumis melo]	[more]
XP_022973141.1	2.8e-35	91.57	NAC domain-containing protein 89-like isoform X1 [Cucurbita maxima]	[more]
XP_008463641.1	3.6e-35	95.24	PREDICTED: NAC domain-containing protein 89-like isoform X1 [Cucumis melo]	[more]
XP_022927557.1	3.6e-35	91.57	NAC domain-containing protein 40-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CsaV3_UNG232160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22290.1	1.8e-25	66.22	NAC domain containing protein 89	[more]
AT2G27300.1	3.1e-25	64.86	NTM1-like 8	[more]
AT3G44290.1	1.7e-23	69.23	NAC domain containing protein 60	[more]
AT3G03200.1	6.8e-20	61.11	NAC domain containing protein 45	[more]
AT5G17260.1	8.9e-20	61.11	NAC domain containing protein 86	[more]

BLAST of CsaV3_UNG232160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94F58\|NAC89_ARATH	3.3e-24	66.22	NAC domain-containing protein 89 OS=Arabidopsis thaliana OX=3702 GN=NAC089 PE=1 ...	[more]
sp\|Q9XIN7\|NAC40_ARATH	5.7e-24	64.86	NAC domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=NTL8 PE=1 SV...	[more]
sp\|Q9LXL9\|NAC60_ARATH	3.1e-22	69.23	NAC domain-containing protein 60 OS=Arabidopsis thaliana OX=3702 GN=NAC60 PE=2 S...	[more]
sp\|A4VCM0\|NAC45_ARATH	1.2e-18	61.11	NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 ...	[more]
sp\|Q9FFI5\|NAC86_ARATH	1.6e-18	61.11	NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 ...	[more]

BLAST of CsaV3_UNG232160 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYC3\|A0A0A0LYC3_CUCSA	3.0e-38	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168870 PE=4 SV=1	[more]
tr\|A0A1S3CJQ8\|A0A1S3CJQ8_CUCME	9.7e-37	96.39	NAC domain-containing protein 89-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S3CJR1\|A0A1S3CJR1_CUCME	2.4e-35	95.24	NAC domain-containing protein 89-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|F6HHD1\|F6HHD1_VITVI	1.1e-27	81.82	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00970 PE=4 SV=...	[more]
tr\|A5BXG9\|A5BXG9_VITVI	1.1e-27	81.82	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_028424 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom
IPR036093	NAC_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG232160.1	CsaV3_UNG232160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	G3DSA:3.30.310.150		coord: 31..91 e-value: 1.1E-17 score: 66.2
IPR036093	NAC domain superfamily	SUPERFAMILY	SSF101941	NAC domain	coord: 13..88
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 24..85 e-value: 7.7E-17 score: 62.3
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 22..91 score: 25.178
None	No IPR available	PANTHER	PTHR31989	FAMILY NOT NAMED	coord: 9..83
None	No IPR available	PANTHER	PTHR31989:SF40	NAC DOMAIN-CONTAINING PROTEIN 40-RELATED	coord: 9..83

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_UNG232160	CSPI01G15020	Wild cucumber (PI 183967)	cpicucB018
CsaV3_UNG232160	CsGy1G014800	Cucumber (Gy14) v2	cgybcucB014

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_UNG232160	CsaV3_1G015130	Cucumber (Chinese Long) v3	cuccucB005

The following block(s) are covering this gene:

None