CsaV3_UNG208660 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_UNG208660
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ribosomal protein S4
Location	scaffold18_1 : 740017 .. 740847 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAGAGGAAGAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTTCAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCAAAATTACTCATTTTCAAGTGTCCCACGGTGATCTAATATCTTTTCAAGAAAATGAGGCGAGAATCCGCGGTTCAGAAATAAGGAGATCTTTCTATAAAGAAATATCAGTTGACAAAATCATAGGCAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAAATAAAAGAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACGAAAATCCCGGTTTTTGCAAGAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAAGAGAATGAAGAGGAATTTGTATCATTTTCAATCCCTATTCTTATCGAATAGAAGGAAGGAGAAAAACCTCAATCTTCCTACTCGAAGAAGAAGTCCTATAGAAAACAACTCTTCTTTCTATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGTCTCTCACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAA

mRNA sequence

ATGCACAGAGGAAGAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTTCAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCAAAATTACTCATTTTCAAGTGTCCCACGGTGATCTAATATCTTTTCAAGAAAATGAGGCGAGAATCCGCGGTTCAGAAATAAGGAGATCTTTCTATAAAGAAATATCAGTTGACAAAATCATAGGCAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAAATAAAAGAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACGAAAATCCCGGTTTTTGCAAGAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAAGAGAATGAAGAGGAATTTGTATCATTTTCAATCCCTATTCTTATCGAATAGAAGGAAGGAGAAAAACCTCAATCTTCCTACTCGAAGAAGAAGTCCTATAGAAAACAACTCTTCTTTCTATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGTCTCTCACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAA

Coding sequence (CDS)

ATGCACAGAGGAAGAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTTCAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCAAAATTACTCATTTTCAAGTGTCCCACGGTGATCTAATATCTTTTCAAGAAAATGAGGCGAGAATCCGCGGTTCAGAAATAAGGAGATCTTTCTATAAAGAAATATCAGTTGACAAAATCATAGGCAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAAATAAAAGAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACGAAAATCCCGGTTTTTGCAAGAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAAGAGAATGAAGAGGAATTTGTATCATTTTCAATCCCTATTCTTATCGAATAGAAGGAAGGAGAAAAACCTCAATCTTCCTACTCGAAGAAGAAGTCCTATAGAAAACAACTCTTCTTTCTATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGTCTCTCACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAA

Protein sequence

MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

Homology

[Close]

BLAST of CsaV3_UNG208660 vs. NCBI nr
Match: YP_004849334.1 (ribosomal protein S4 (mitochondrion) [Cucumis sativus] >ADZ10761.1 ribosomal protein S4 (mitochondrion) [Cucumis sativus])

HSP 1 Score: 557.0 bits (1434), Expect = 3.6e-155
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV
Sbjct: 85  MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 144

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR
Sbjct: 145 SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 204

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN
Sbjct: 205 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 264

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL
Sbjct: 265 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 324

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 325 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 360

[Close]

BLAST of CsaV3_UNG208660 vs. NCBI nr
Match: AEN56127.1 (ribosomal protein S4 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 543.5 bits (1399), Expect = 4.2e-151
Identity = 270/276 (97.83%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV
Sbjct: 104 MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 163

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQENEAR  GSEIRRSFY EISVDKIIGKFLDHPVRMWRRN+REWFHLLKT+R
Sbjct: 164 SHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQR 223

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN
Sbjct: 224 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 283

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RRKEKNLNLPTRRRSPIENNSS YSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL
Sbjct: 284 RRKEKNLNLPTRRRSPIENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 343

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 344 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 379

[Close]

BLAST of CsaV3_UNG208660 vs. NCBI nr
Match: XP_023520731.1 (uncharacterized protein LOC111784180, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.0 bits (1268), Expect = 6.4e-136
Identity = 246/277 (88.81%), Postives = 255/277 (92.06%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRGRERT+YIPFPLNPETRSDVIPVRLHFSST+PQARQPISHRRVCVNKGMV ITHF+V
Sbjct: 133 MHRGRERTNYIPFPLNPETRSDVIPVRLHFSSTLPQARQPISHRRVCVNKGMVPITHFKV 192

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLIS +EN+ARIRG EIRRSFY EISV+KIIGKFLDHPVRMWRR K EWFHLLKTKR
Sbjct: 193 SHGDLISLKENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKR 252

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKK-FGSEKVCLGSSFAEHKRMKRNLYHFQSLFLS 180
           GCRLL KSRFLQ+LRSSMQE DLER KK FGS+KVCLG SFAEH RMKRNLYHFQSLFLS
Sbjct: 253 GCRLLLKSRFLQQLRSSMQESDLERRKKLFGSDKVCLGCSFAEHNRMKRNLYHFQSLFLS 312

Query: 181 NRRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRT 240
           NRRKEKN NLPTRR SPI  NSS YSN TYCSASPHQFTMKSKIK + LPTHYSEVNHRT
Sbjct: 313 NRRKEKNRNLPTRRISPIVYNSSLYSNYTYCSASPHQFTMKSKIKRIELPTHYSEVNHRT 372

Query: 241 LKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           LKAVVSYGP IGHIPHDIRLKDPNLPLRS NGRGQNI
Sbjct: 373 LKAVVSYGPKIGHIPHDIRLKDPNLPLRSANGRGQNI 409

[Close]

BLAST of CsaV3_UNG208660 vs. NCBI nr
Match: ALJ78540.1 (ribosomal protein S4, partial (mitochondrion) [Malus hupehensis var. mengshanensis])

HSP 1 Score: 490.7 bits (1262), Expect = 3.2e-135
Identity = 243/276 (88.04%), Postives = 252/276 (91.30%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRG ERTSYIPFPLNPETRSDVIPVRLHF  TIPQARQPISH RVCVN GMV ITHF+V
Sbjct: 84  MHRGTERTSYIPFPLNPETRSDVIPVRLHFCETIPQARQPISHGRVCVNNGMVSITHFKV 143

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQEN+ARIRG EIRRSFY EISV+KIIGKFLDHPVRMWRR K EWFHLLKT R
Sbjct: 144 SHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKAEWFHLLKTHR 203

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLL KSRFL++LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNLYHF+SLFLSN
Sbjct: 204 GCRLLLKSRFLRQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSN 263

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RR +KN NLPTR RSPI  NSS Y NSTYCSASPHQFTMK +IK + LPTHYSEVNHRTL
Sbjct: 264 RRNKKNRNLPTRTRSPIVYNSSLYRNSTYCSASPHQFTMKRRIKRIELPTHYSEVNHRTL 323

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGPNIGHIPHDIRLKD NLPLRSGNGRGQNI
Sbjct: 324 KAVVSYGPNIGHIPHDIRLKDLNLPLRSGNGRGQNI 359

[Close]

BLAST of CsaV3_UNG208660 vs. NCBI nr
Match: YP_009270662.1 (ribosomal protein S4 (mitochondrion) [Nelumbo nucifera] >ALL55115.1 ribosomal protein S4 (mitochondrion) [Nelumbo nucifera])

HSP 1 Score: 487.3 bits (1253), Expect = 3.5e-134
Identity = 240/276 (86.96%), Postives = 250/276 (90.58%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRG ERTSYIPFPLNPETRSDVIPVRLHF  TIPQARQPISHRRVCVN GMV ITH +V
Sbjct: 77  MHRGTERTSYIPFPLNPETRSDVIPVRLHFRQTIPQARQPISHRRVCVNNGMVSITHLKV 136

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQEN+AR RG EIRRSFY +ISV+KIIGKFLDHPVRMWRR K EWF LLKTKR
Sbjct: 137 SHGDLISFQENDARTRGEEIRRSFYIDISVEKIIGKFLDHPVRMWRRTKTEWFRLLKTKR 196

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNLYHF+SLFLS 
Sbjct: 197 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSK 256

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RR +KN NLPTR RSPI NNSS YSNSTYCS SPHQFT K +IK + LPTHYSEVNHRT 
Sbjct: 257 RRNDKNRNLPTRTRSPIVNNSSLYSNSTYCSGSPHQFTRKRRIKRIELPTHYSEVNHRTP 316

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGP+IGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 317 KAVVSYGPHIGHIPHDIRLKDPNLPLRSGNGRGQNI 352

[Close]

BLAST of CsaV3_UNG208660 vs. TAIR10
Match: AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein)

HSP 1 Score: 459.1 bits (1180), Expect = 1.9e-129
Identity = 233/278 (83.81%), Postives = 247/278 (88.85%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRG +RTSYIPFPLNPETR DVIP+RLHF  TIPQARQPISHRRVCVNKGMV ITHF++
Sbjct: 87  MHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQARQPISHRRVCVNKGMVSITHFKL 146

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGD+ISFQEN A IRG EIRRSFYKEISV+KIIGK L  P+RMWRR+K EWFHLLKTKR
Sbjct: 147 SHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLLHQPLRMWRRSKTEWFHLLKTKR 206

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL   +SLFLS 
Sbjct: 207 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL--LKSLFLSK 266

Query: 181 RRKEKNLNLPTRRRSPIENNS--SFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHR 240
           RRK+KNLNLPTR  SPI  NS  S YSNSTYC ASPH+ TMK +IK + LPTHYSEVNHR
Sbjct: 267 RRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRRIKRIELPTHYSEVNHR 326

Query: 241 TLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           T KAVVSYGPNIGHIPHDIRLKDPNLPLRS NGRGQNI
Sbjct: 327 TPKAVVSYGPNIGHIPHDIRLKDPNLPLRSRNGRGQNI 362

[Close]

BLAST of CsaV3_UNG208660 vs. TAIR10
Match: ATMG00290.1 (mitochondrial ribosomal protein S4)

HSP 1 Score: 459.1 bits (1180), Expect = 1.9e-129
Identity = 233/278 (83.81%), Postives = 247/278 (88.85%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRG +RTSYIPFPLNPETR DVIP+RLHF  TIPQARQPISHRRVCVNKGMV ITHF++
Sbjct: 87  MHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQARQPISHRRVCVNKGMVSITHFKL 146

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGD+ISFQEN A IRG EIRRSFYKEISV+KIIGK L  P+RMWRR+K EWFHLLKTKR
Sbjct: 147 SHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLLHQPLRMWRRSKTEWFHLLKTKR 206

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL   +SLFLS 
Sbjct: 207 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL--LKSLFLSK 266

Query: 181 RRKEKNLNLPTRRRSPIENNS--SFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHR 240
           RRK+KNLNLPTR  SPI  NS  S YSNSTYC ASPH+ TMK +IK + LPTHYSEVNHR
Sbjct: 267 RRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRRIKRIELPTHYSEVNHR 326

Query: 241 TLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           T KAVVSYGPNIGHIPHDIRLKDPNLPLRS NGRGQNI
Sbjct: 327 TPKAVVSYGPNIGHIPHDIRLKDPNLPLRSRNGRGQNI 362

[Close]

BLAST of CsaV3_UNG208660 vs. Swiss-Prot
Match: sp|Q31708|RT04_ARATH (Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=2 SV=2)

HSP 1 Score: 425.2 bits (1092), Expect = 5.4e-118
Identity = 222/278 (79.86%), Postives = 238/278 (85.61%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRG +RTSYIPF LN ETR DVIP+RL+F  TIPQARQ ISHRRVCVNKGMV ITHF++
Sbjct: 87  MHRGTKRTSYIPFLLNLETRFDVIPLRLYFLETIPQARQLISHRRVCVNKGMVSITHFKL 146

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGD+ISFQEN A IRG EIRRSFYKEI V+KIIGK L  P+RMWRR+K EWFHLLKTKR
Sbjct: 147 SHGDIISFQENNAIIRGEEIRRSFYKEILVEKIIGKLLHQPLRMWRRSKTEWFHLLKTKR 206

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL   +SLFLS 
Sbjct: 207 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL--LKSLFLSK 266

Query: 181 RRKEKNLNLPTRRRSPIENNS--SFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHR 240
           RRK+KNLNLPTR  SPI  NS  S YSNSTYC ASPH+ TMK +IK + LPTHY EVN+R
Sbjct: 267 RRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRRIKRIELPTHYLEVNYR 326

Query: 241 TLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           T KAVV YGPNIGHIPHDIRLKD NL L S NGRGQNI
Sbjct: 327 TPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGRGQNI 362

[Close]

BLAST of CsaV3_UNG208660 vs. Swiss-Prot
Match: sp|P26866|RT04_MARPO (Ribosomal protein S4, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS4 PE=3 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 6.8e-12
Identity = 40/69 (57.97%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 16  NPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARI 75
           N E R DVI VRL+F ST+ QARQ ISH+ +CVN   V I  FQVS+GDLIS QEN    
Sbjct: 85  NIEKRLDVILVRLNFCSTMFQARQLISHKNICVNYKKVNIPGFQVSNGDLISIQENSLDF 144

Query: 76  RGSEIRRSF 85
             S IR++F
Sbjct: 145 FKSNIRKNF 153

[Close]

BLAST of CsaV3_UNG208660 vs. Swiss-Prot
Match: sp|Q2S936|RS4_HAHCH (30S ribosomal protein S4 OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=rpsD PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06
Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 18  ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQE---NEAR 77
           E R D +  R+ F ST  +ARQ +SH+ + VN   V I  +QV  GD++S +E   N+ R
Sbjct: 95  ERRLDNVVYRMGFGSTRSEARQLVSHKAILVNGKAVNIPSYQVKPGDVVSIREKSKNQLR 154

Query: 78  IRGS---EIRRSFYKEISVD--KIIGKFLDHPVR 104
           I+GS     +R+  + I VD  K+ G F   P R
Sbjct: 155 IKGSLELAAQRATLEWIEVDAAKMSGTFKSVPER 188

[Close]

BLAST of CsaV3_UNG208660 vs. Swiss-Prot
Match: sp|Q5F5V1|RS4_NEIG1 (30S ribosomal protein S4 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=rpsD PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.5e-06
Identity = 32/94 (34.04%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 18  ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQE------- 77
           E+R D +  R+ F ST  +ARQ +SH+ + VN  +V I  FQV  GD++S +E       
Sbjct: 95  ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVR 154

Query: 78  -NEARIRGSEIRRSFYKEISVDKIIGKFLDHPVR 104
             EA    ++I    +  +  DK+ G F + P R
Sbjct: 155 IQEALGLATQIGLPGWVSVDADKLEGVFKNMPDR 188

[Close]

BLAST of CsaV3_UNG208660 vs. Swiss-Prot
Match: sp|A9M3U1|RS4_NEIM0 (30S ribosomal protein S4 OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=rpsD PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.5e-06
Identity = 32/94 (34.04%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 18  ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQE------- 77
           E+R D +  R+ F ST  +ARQ +SH+ + VN  +V I  FQV  GD++S +E       
Sbjct: 95  ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVR 154

Query: 78  -NEARIRGSEIRRSFYKEISVDKIIGKFLDHPVR 104
             EA    ++I    +  +  DK+ G F + P R
Sbjct: 155 IQEALGLATQIGLPGWVSVDADKLEGVFKNMPDR 188

[Close]

BLAST of CsaV3_UNG208660 vs. TrEMBL
Match: tr|G3EIY6|G3EIY6_CUCSA (Ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=rps4 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.4e-155
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV
Sbjct: 85  MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 144

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR
Sbjct: 145 SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 204

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN
Sbjct: 205 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 264

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL
Sbjct: 265 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 324

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 325 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 360

[Close]

BLAST of CsaV3_UNG208660 vs. TrEMBL
Match: tr|G3EU07|G3EU07_CUCME (Ribosomal protein S4 OS=Cucumis melo subsp. melo OX=412675 GN=rps4 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 2.8e-151
Identity = 270/276 (97.83%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV
Sbjct: 104 MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 163

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQENEAR  GSEIRRSFY EISVDKIIGKFLDHPVRMWRRN+REWFHLLKT+R
Sbjct: 164 SHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQR 223

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN
Sbjct: 224 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 283

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RRKEKNLNLPTRRRSPIENNSS YSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL
Sbjct: 284 RRKEKNLNLPTRRRSPIENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 343

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 344 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 379

[Close]

BLAST of CsaV3_UNG208660 vs. TrEMBL
Match: tr|A0A0U2N8V3|A0A0U2N8V3_9ROSA (Ribosomal protein S4 (Fragment) OS=Malus hupehensis var. mengshanensis OX=550789 GN=rps4 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 2.1e-135
Identity = 243/276 (88.04%), Postives = 252/276 (91.30%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRG ERTSYIPFPLNPETRSDVIPVRLHF  TIPQARQPISH RVCVN GMV ITHF+V
Sbjct: 84  MHRGTERTSYIPFPLNPETRSDVIPVRLHFCETIPQARQPISHGRVCVNNGMVSITHFKV 143

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQEN+ARIRG EIRRSFY EISV+KIIGKFLDHPVRMWRR K EWFHLLKT R
Sbjct: 144 SHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKAEWFHLLKTHR 203

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLL KSRFL++LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNLYHF+SLFLSN
Sbjct: 204 GCRLLLKSRFLRQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSN 263

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RR +KN NLPTR RSPI  NSS Y NSTYCSASPHQFTMK +IK + LPTHYSEVNHRTL
Sbjct: 264 RRNKKNRNLPTRTRSPIVYNSSLYRNSTYCSASPHQFTMKRRIKRIELPTHYSEVNHRTL 323

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGPNIGHIPHDIRLKD NLPLRSGNGRGQNI
Sbjct: 324 KAVVSYGPNIGHIPHDIRLKDLNLPLRSGNGRGQNI 359

[Close]

BLAST of CsaV3_UNG208660 vs. TrEMBL
Match: tr|A0A1B0THE3|A0A1B0THE3_NELNU (Ribosomal protein S4 OS=Nelumbo nucifera OX=4432 GN=rps4 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.3e-134
Identity = 240/276 (86.96%), Postives = 250/276 (90.58%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRG ERTSYIPFPLNPETRSDVIPVRLHF  TIPQARQPISHRRVCVN GMV ITH +V
Sbjct: 77  MHRGTERTSYIPFPLNPETRSDVIPVRLHFRQTIPQARQPISHRRVCVNNGMVSITHLKV 136

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQEN+AR RG EIRRSFY +ISV+KIIGKFLDHPVRMWRR K EWF LLKTKR
Sbjct: 137 SHGDLISFQENDARTRGEEIRRSFYIDISVEKIIGKFLDHPVRMWRRTKTEWFRLLKTKR 196

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNLYHF+SLFLS 
Sbjct: 197 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSK 256

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           RR +KN NLPTR RSPI NNSS YSNSTYCS SPHQFT K +IK + LPTHYSEVNHRT 
Sbjct: 257 RRNDKNRNLPTRTRSPIVNNSSLYSNSTYCSGSPHQFTRKRRIKRIELPTHYSEVNHRTP 316

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGP+IGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 317 KAVVSYGPHIGHIPHDIRLKDPNLPLRSGNGRGQNI 352

[Close]

BLAST of CsaV3_UNG208660 vs. TrEMBL
Match: tr|A0A0G3B9G3|A0A0G3B9G3_9ROSI (Ribosomal protein S4 (Fragment) OS=Francoa sonchifolia OX=23250 GN=rps4 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 6.8e-134
Identity = 241/276 (87.32%), Postives = 250/276 (90.58%), Query Frame = 0


Query: 1   MHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQV 60
           MHRGRERTSYIPFPLNPETRSDVIPVRLHF  TIPQARQPISHRRVCVN GMV ITH +V
Sbjct: 73  MHRGRERTSYIPFPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHVKV 132

Query: 61  SHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDHPVRMWRRNKREWFHLLKTKR 120
           SHGDLISFQEN+ARIRG EIRRSFY EISV+KIIGKFLD PVRMWRR K EWFHLLKTKR
Sbjct: 133 SHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDRPVRMWRRTKTEWFHLLKTKR 192

Query: 121 GCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSN 180
           GCR L KSRFLQ+LRSSMQ+EDLERTKKFGSEKVCLGSSFAEH RMKRNLYHF+SLFLS 
Sbjct: 193 GCRRLLKSRFLQQLRSSMQKEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSK 252

Query: 181 RRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTL 240
           R+ EK  NLPTR  SPI  NSS YSNSTYCSASPHQFTMK +IK + LPTHYSEVNHRT 
Sbjct: 253 RKNEKKRNLPTRTISPIVYNSSLYSNSTYCSASPHQFTMKRRIKRIELPTHYSEVNHRTP 312

Query: 241 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 277
           KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 313 KAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 348

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG208660 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004849334.1	3.6e-155	100.00	ribosomal protein S4 (mitochondrion) [Cucumis sativus] >ADZ10761.1 ribosomal pro...	[more]
AEN56127.1	4.2e-151	97.83	ribosomal protein S4 (mitochondrion) [Cucumis melo subsp. melo]	[more]
XP_023520731.1	6.4e-136	88.81	uncharacterized protein LOC111784180, partial [Cucurbita pepo subsp. pepo]	[more]
ALJ78540.1	3.2e-135	88.04	ribosomal protein S4, partial (mitochondrion) [Malus hupehensis var. mengshanens...	[more]
YP_009270662.1	3.5e-134	86.96	ribosomal protein S4 (mitochondrion) [Nelumbo nucifera] >ALL55115.1 ribosomal pr...	[more]

BLAST of CsaV3_UNG208660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G07734.1	1.9e-129	83.81	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein	[more]
ATMG00290.1	1.9e-129	83.81	mitochondrial ribosomal protein S4	[more]

BLAST of CsaV3_UNG208660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q31708\|RT04_ARATH	5.4e-118	79.86	Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=2...	[more]
sp\|P26866\|RT04_MARPO	6.8e-12	57.97	Ribosomal protein S4, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS4 PE=...	[more]
sp\|Q2S936\|RS4_HAHCH	2.5e-06	38.30	30S ribosomal protein S4 OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=r...	[more]
sp\|Q5F5V1\|RS4_NEIG1	9.5e-06	34.04	30S ribosomal protein S4 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)...	[more]
sp\|A9M3U1\|RS4_NEIM0	9.5e-06	34.04	30S ribosomal protein S4 OS=Neisseria meningitidis serogroup C (strain 053442) O...	[more]

BLAST of CsaV3_UNG208660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|G3EIY6\|G3EIY6_CUCSA	2.4e-155	100.00	Ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=rps4 PE=4 SV=1	[more]
tr\|G3EU07\|G3EU07_CUCME	2.8e-151	97.83	Ribosomal protein S4 OS=Cucumis melo subsp. melo OX=412675 GN=rps4 PE=4 SV=1	[more]
tr\|A0A0U2N8V3\|A0A0U2N8V3_9ROSA	2.1e-135	88.04	Ribosomal protein S4 (Fragment) OS=Malus hupehensis var. mengshanensis OX=550789...	[more]
tr\|A0A1B0THE3\|A0A1B0THE3_NELNU	2.3e-134	86.96	Ribosomal protein S4 OS=Nelumbo nucifera OX=4432 GN=rps4 PE=4 SV=1	[more]
tr\|A0A0G3B9G3\|A0A0G3B9G3_9ROSI	6.8e-134	87.32	Ribosomal protein S4 (Fragment) OS=Francoa sonchifolia OX=23250 GN=rps4 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR022801	Ribosomal_S4/S9
IPR036986	S4_RNA-bd_sf
IPR002942	S4_RNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG208660.1	CsaV3_UNG208660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 19..81 e-value: 1.0E-5 score: 35.0
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 20..66 e-value: 5.2E-13 score: 48.4
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 19..94 score: 9.069
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 20..72 e-value: 4.06868E-10 score: 53.7926
IPR036986	RNA-binding S4 domain superfamily	GENE3D	G3DSA:3.10.290.10		coord: 20..101 e-value: 7.5E-13 score: 50.4
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 1..129
None	No IPR available	PANTHER	PTHR11831:SF12	RIBOSOMAL PROTEIN S4, MITOCHONDRIAL	coord: 1..129
None	No IPR available	SUPERFAMILY	SSF55174	Alpha-L RNA-binding motif	coord: 13..106

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_UNG208660	Bottle gourd (USVL1VR-Ls)	cuclsiB159