CsaV3_UNG208600 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_UNG208600
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ribosomal protein S3
Location	scaffold18_1 : 710888 .. 713509 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCAATATTCTTTGCGCCTGATTTTTGTTCTTCGCGCATCTGGACCCCTTATAGTTCCACTCCATAAGACAGGGATATTGTCGAGCACGAGTAGCCTCGCTGCTTGGATCGGCGGGGAGGAGGATCTCAAAGTATGGGGCAAAGGATCAAGCGCTTTGACTTTGTCTCCCGGGATCGACCACGGGTTGGGTTTGAGAGCCGTGTGATGGGTGACTATCCAGCACGGTTCGGAGAGCACTTTTAGTCTGCGTTGGTGAATAGAAGCCCCCCCTATCAAGCAAGAAAGAAGCGGCTCTTCCCACGCCACGGCGGAGTCGCCATTGACTCTATTTATTATTATGGTAAATCACTGTATCAAGATGTCAATCTGAGATCTTATTTCGGTTCGATACGTCCACCGGAGAGACTGACCTTTGGCTTTCGTCTCGGTAGGTGTATTATTTTACATTTTCCCAAAAGAACATTCATTCATTTCTTTCTTCCTCGTCGACCACGAGGACTGAAAGGAGGCGAAAAATCCAAACCCGGAAAGGAGGAGAAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGAGGATAGAGAAGAAGAACGAAAGGAAGAGGAATTTCATGCCGCTCCGCTTAAGACTCCTTGCTCCTTCGGAGGGGTTCGGACTCCTCATCTGGAGCTTGATTTACTCCCCCAAGATAAGGATGCCTTGGAGGCAGAGAAAAGAGTCGAGTCGATCAGGCTCTCAGACCGGGAAAAGCAAAAGGCAATTCGGATTTGGCCGAAAAAGAAGGAAGGCTATGGATACCATGACCGATCACCATCTCGAAAGATTCTTCTTTCTAAATTACTTCGCGTCAGCGGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTTGTAAATGACATAGCCTTCCTGATAGAAAATGACGACTCCTTCAGAAAAACGAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCCGACGGCCCGACGAGTCATCTACTGAAAATCACCCTCCCCGCAGTGCGCTCCTCCTTTCATTATTTGGTCATGCAATACTTATTGAATACAAAGAACAAAATGCATTTCGACCCCGTCTACGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACTCAGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTCTAGAAAGCTCGACCACTTTGACTTTGGCCGAAGCCAAAAAGAGGTTGACCCACTTCATTCGACAAGGGAATGATCTTCGTTTCGCGGGAACAAGAAAAAGAAGCATCTCGCTCTTTCCTTTCTTCGGTGCTACCATAACATTGAGTTCCATTAAGAAAAAGCAGGAACATGAATTAGATGGAACCGCGGAGTGGGACCGGGAACATGAAGGTTTCAGTTCCATAAACAAGTCCTTCGCCTCTAAAAGGGTAGAAAACTCCTCAAGAGGAGCCGTCCGGAGTCCGAAGGACTTTCCATTAGTAGAGTTAGGAGCAGCTATATGTGAGCGGGAGGGGATGGATAAAAACCTTTTTTTTGAGGATACCCGGGAAGAACTCCTAGGTCAATTAAGGATCAAATCTTGGAACCTCATGGGTAAGGATAAGGTAATCGAATTGATAGAGAAATTCATAGACCTAGGTTGGATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCCGTAGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATGCGATCTTTCTTGTCTAATAGAACAAAGACTAATACCTTAATTGAGTCAGTCAAGATCAAATCTGTTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTCAACTGAGAAAGAAAACAAGATCATTTCGTTCCATTTTGAGTCAAATAGTTCAGGATATTCCATTTGTAATGAATAAAGGGGTTGAGGGGATCCGTATATGTTGTTCAGGTCGATCAGAAGGCGCGGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCGTAATGTATTTCACCAGAAAATCGATTATGCTCCTGCGGAAGTATCTACTCGTTATGGAATCTCAGGTGTCAAAGTGTGGATTTCATATATCAAAAAGAAAAAGGAAGGTGTTATATCCGAAACGTACGAAATATAGTAAATATCGTAAAGGCAGATGTAGTAGGGGTTGCAAACCGGACGGTACACAACTTGGTTTTGGAAGATATGGCACTCAAAGTTGTAGAGCTGGTCGTCTTTCATATCGAGCCATTGAAGCAGCGCGTCGGGCTATGAGCGGACAATTCCATCGTGCTATGAGCGGACAATTCCGAAGAAATGGTCAAATATGGGTAAGAGTTCTCGCAGATCTCCCTATTACCGGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCGTGTGTCCACGGGACAAATCCCATTTGAAATGGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCGCTACATTAGCGGCGCATAAACCATGTTCGTCAACCAAGTTTGTTCAGTGGTCGTAA

mRNA sequence

ATGCGGCAATATTCTTTGCGCCTGATTTTTGTTCTTCGCGCATCTGGACCCCTTATAGTTCCACTCCATAAGACAGGGATATTGTCGAGCACGAGTAGCCTCGCTGCTTGGATCGGCGGGGAGGAGGATCTCAAAGTATGGGGCAAAGGATCAAGCGCTTTGACTTTGTCTCCCGGGATCGACCACGGAAGCCCCCCCTATCAAGCAAGAAAGAAGCGGCTCTTCCCACGCCACGGCGGAGTCGCCATTGACTCTATTTATTATTATGGTAAATCACTGTATCAAGATGTCAATCTGAGATCTTATTTCGGTTCGATACGTCCACCGGAGAGACTGACCTTTGGCTTTCGTCTCGGTAGGTGTATTATTTTACATTTTCCCAAAAGAACATTCATTCATTTCTTTCTTCCTCGTCGACCACGAGGACTGAAAGGAGGCGAAAAATCCAAACCCGGAAAGGAGGAGAAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGAGGATAGAGAAGAAGAACGAAAGGAAGAGGAATTTCATGCCGCTCCGCTTAAGACTCCTTGCTCCTTCGGAGGGGTTCGGACTCCTCATCTGGAGCTTGATTTACTCCCCCAAGATAAGGATGCCTTGGAGGCAGAGAAAAGAGTCGAGTCGATCAGGCTCTCAGACCGGGAAAAGCAAAAGGCAATTCGGATTTGGCCGAAAAAGAAGGAAGGCTATGGATACCATGACCGATCACCATCTCGAAAGATTCTTCTTTCTAAATTACTTCGCGTCAGCGGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTTGTAAATGACATAGCCTTCCTGATAGAAAATGACGACTCCTTCAGAAAAACGAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCCGACGGCCCGACGAGTCATCTACTGAAAATCACCCTCCCCGCAGTGCGCTCCTCCTTTCATTATTTGGTCATGCAATACTTATTGAATACAAAGAACAAAATGCATTTCGACCCCGTCTACGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACTCAGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTCTAGAAAGCTCGACCACTTTGACTTTGGCCGAAGCCAAAAAGAGGTTGACCCACTTCATTCGACAAGGGAATGATCTTCGTTTCGCGGGAACAAGAAAAAGAAGCATCTCGCTCTTTCCTTTCTTCGGTGCTACCATAACATTGAGTTCCATTAAGAAAAAGCAGGAACATGAATTAGATGGAACCGCGGAGTGGGACCGGGAACATGAAGGTTTCAGTTCCATAAACAAGTCCTTCGCCTCTAAAAGGGTAGAAAACTCCTCAAGAGGAGCCGTCCGGAGTCCGAAGGACTTTCCATTAGTAGAGTTAGGAGCAGCTATATGTGAGCGGGAGGGGATGGATAAAAACCTTTTTTTTGAGGATACCCGGGAAGAACTCCTAGGTCAATTAAGGATCAAATCTTGGAACCTCATGGGTAAGGATAAGGTAATCGAATTGATAGAGAAATTCATAGACCTAGGTTGGATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCCGTAGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATGCGATCTTTCTTGTCTAATAGAACAAAGACTAATACCTTAATTGAGTCAGTCAAGATCAAATCTGTTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTCAACTGAGAAAGAAAACAAGATCATTTCGTTCCATTTTGAGTCAAATAGTTCAGGATATTCCATTTGTAATGAATAAAGGGGTTGAGGGGATCCGTATATGTTGTTCAGGTCGATCAGAAGGCGCGGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCGTAATGTATTTCACCAGAAAATCGATTATGCTCCTGCGGAAGTATCTACTCGTTATGGAATCTCAGGTGTCAAAGTGTGGATTTCATATATCAAAAAGAAAAAGGAAGGTGTTATATCCGAAACATGTAGTAGGGGTTGCAAACCGGACGGTACACAACTTGGTTTTGGAAGATATGGCACTCAAAGTTGTAGAGCTGGTCGTCTTTCATATCGAGCCATTGAAGCAGCGCGTCGGGCTATGAGCGGACAATTCCATCGTGCTATGAGCGGACAATTCCGAAGAAATGGTCAAATATGGGTAAGAGTTCTCGCAGATCTCCCTATTACCGGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCGTGTGTCCACGGGACAAATCCCATTTGAAATGGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCGCTACATTAGCGGCGCATAAACCATGTTCGTCAACCAAGTTTGTTCAGTGGTCGTAA

Coding sequence (CDS)

ATGCGGCAATATTCTTTGCGCCTGATTTTTGTTCTTCGCGCATCTGGACCCCTTATAGTTCCACTCCATAAGACAGGGATATTGTCGAGCACGAGTAGCCTCGCTGCTTGGATCGGCGGGGAGGAGGATCTCAAAGTATGGGGCAAAGGATCAAGCGCTTTGACTTTGTCTCCCGGGATCGACCACGGAAGCCCCCCCTATCAAGCAAGAAAGAAGCGGCTCTTCCCACGCCACGGCGGAGTCGCCATTGACTCTATTTATTATTATGGTAAATCACTGTATCAAGATGTCAATCTGAGATCTTATTTCGGTTCGATACGTCCACCGGAGAGACTGACCTTTGGCTTTCGTCTCGGTAGGTGTATTATTTTACATTTTCCCAAAAGAACATTCATTCATTTCTTTCTTCCTCGTCGACCACGAGGACTGAAAGGAGGCGAAAAATCCAAACCCGGAAAGGAGGAGAAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGAGGATAGAGAAGAAGAACGAAAGGAAGAGGAATTTCATGCCGCTCCGCTTAAGACTCCTTGCTCCTTCGGAGGGGTTCGGACTCCTCATCTGGAGCTTGATTTACTCCCCCAAGATAAGGATGCCTTGGAGGCAGAGAAAAGAGTCGAGTCGATCAGGCTCTCAGACCGGGAAAAGCAAAAGGCAATTCGGATTTGGCCGAAAAAGAAGGAAGGCTATGGATACCATGACCGATCACCATCTCGAAAGATTCTTCTTTCTAAATTACTTCGCGTCAGCGGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTTGTAAATGACATAGCCTTCCTGATAGAAAATGACGACTCCTTCAGAAAAACGAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCCGACGGCCCGACGAGTCATCTACTGAAAATCACCCTCCCCGCAGTGCGCTCCTCCTTTCATTATTTGGTCATGCAATACTTATTGAATACAAAGAACAAAATGCATTTCGACCCCGTCTACGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACTCAGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTCTAGAAAGCTCGACCACTTTGACTTTGGCCGAAGCCAAAAAGAGGTTGACCCACTTCATTCGACAAGGGAATGATCTTCGTTTCGCGGGAACAAGAAAAAGAAGCATCTCGCTCTTTCCTTTCTTCGGTGCTACCATAACATTGAGTTCCATTAAGAAAAAGCAGGAACATGAATTAGATGGAACCGCGGAGTGGGACCGGGAACATGAAGGTTTCAGTTCCATAAACAAGTCCTTCGCCTCTAAAAGGGTAGAAAACTCCTCAAGAGGAGCCGTCCGGAGTCCGAAGGACTTTCCATTAGTAGAGTTAGGAGCAGCTATATGTGAGCGGGAGGGGATGGATAAAAACCTTTTTTTTGAGGATACCCGGGAAGAACTCCTAGGTCAATTAAGGATCAAATCTTGGAACCTCATGGGTAAGGATAAGGTAATCGAATTGATAGAGAAATTCATAGACCTAGGTTGGATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCCGTAGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATGCGATCTTTCTTGTCTAATAGAACAAAGACTAATACCTTAATTGAGTCAGTCAAGATCAAATCTGTTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTCAACTGAGAAAGAAAACAAGATCATTTCGTTCCATTTTGAGTCAAATAGTTCAGGATATTCCATTTGTAATGAATAAAGGGGTTGAGGGGATCCGTATATGTTGTTCAGGTCGATCAGAAGGCGCGGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCGTAATGTATTTCACCAGAAAATCGATTATGCTCCTGCGGAAGTATCTACTCGTTATGGAATCTCAGGTGTCAAAGTGTGGATTTCATATATCAAAAAGAAAAAGGAAGGTGTTATATCCGAAACATGTAGTAGGGGTTGCAAACCGGACGGTACACAACTTGGTTTTGGAAGATATGGCACTCAAAGTTGTAGAGCTGGTCGTCTTTCATATCGAGCCATTGAAGCAGCGCGTCGGGCTATGAGCGGACAATTCCATCGTGCTATGAGCGGACAATTCCGAAGAAATGGTCAAATATGGGTAAGAGTTCTCGCAGATCTCCCTATTACCGGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCGTGTGTCCACGGGACAAATCCCATTTGAAATGGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCGCTACATTAGCGGCGCATAAACCATGTTCGTCAACCAAGTTTGTTCAGTGGTCGTAA

Protein sequence

MRQYSLRLIFVLRASGPLIVPLHKTGILSSTSSLAAWIGGEEDLKVWGKGSSALTLSPGIDHGSPPYQARKKRLFPRHGGVAIDSIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLKGGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPHLELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIAFFLESSTTLTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSILSQIVQDIPFVMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISYIKKKKEGVISETCSRGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAMSGQFHRAMSGQFRRNGQIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS

Homology

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BLAST of CsaV3_UNG208600 vs. NCBI nr
Match: YP_004849333.1 (ribosomal protein S3 (mitochondrion) [Cucumis sativus] >ADZ10760.1 ribosomal protein S3 (mitochondrion) [Cucumis sativus])

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 624/625 (99.84%), Postives = 624/625 (99.84%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 144
           S YYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK
Sbjct: 24  SDYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 83

Query: 145 GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH 204
           GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH
Sbjct: 84  GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH 143

Query: 205 LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL 264
           LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL
Sbjct: 144 LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL 203

Query: 265 RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV 324
           RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV
Sbjct: 204 RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV 263

Query: 325 RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA 384
           RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA
Sbjct: 264 RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA 323

Query: 385 FFLESSTTLTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHE 444
           FFLESSTTLTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHE
Sbjct: 324 FFLESSTTLTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHE 383

Query: 445 LDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLF 504
           LDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLF
Sbjct: 384 LDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLF 443

Query: 505 FEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPV 564
           FEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPV
Sbjct: 444 FEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPV 503

Query: 565 GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIL 624
           GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIL
Sbjct: 504 GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIL 563

Query: 625 SQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVST 684
           SQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVST
Sbjct: 564 SQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVST 623

Query: 685 RYGISGVKVWISYIKKKKEGVISET 710
           RYGISGVKVWISYIKKKKEGVISET
Sbjct: 624 RYGISGVKVWISYIKKKKEGVISET 648

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BLAST of CsaV3_UNG208600 vs. NCBI nr
Match: EEF27073.1 (60S ribosomal protein L16, putative [Ricinus communis])

HSP 1 Score: 1014.2 bits (2621), Expect = 2.5e-292
Identity = 548/776 (70.62%), Postives = 582/776 (75.00%), Query Frame = 0


Query: 64  SPPYQARKKRLFPRHGGVAIDSIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCII 123
           +PP +  +   F  HGGV IDSIYYYGKS+YQDVNLRSYFGSIRPP RLTFGFRLGRCII
Sbjct: 3   APPIKQERSGSF--HGGVTIDSIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCII 62

Query: 124 LHFPKRTFIHFFLPRRPRGLKGGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKE 183
           LHFPKRTFI+FFL RRPR LK  EK++PGK EKGRWW FGKVGPI CLHSS++ EEER E
Sbjct: 63  LHFPKRTFINFFLSRRPRRLKRREKTRPGK-EKGRWWTFGKVGPIRCLHSSDNTEEERNE 122

Query: 184 EEFHAAPLKTPCSFGGVRTPHLELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKK 243
                                              A KRVESIRL DREK+  IRIWPKK
Sbjct: 123 VRGRG------------------------------AGKRVESIRLDDREKENEIRIWPKK 182

Query: 244 KEGYGYHDRSPSRKILLSKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF 303
           K+ YGYHDRSPS K  LSK LRVS GAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF
Sbjct: 183 KQRYGYHDRSPSIKKNLSKSLRVS-GAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF 242

Query: 304 PNQSRSDGPTSHLLKITLPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPS 363
           P +SRSDGPTSHLLK TLPAV  S +Y VMQYLLNTKN++HFDPV VLNHFVAPGVAEPS
Sbjct: 243 PKKSRSDGPTSHLLKRTLPAVCLSLNYSVMQYLLNTKNQIHFDPVVVLNHFVAPGVAEPS 302

Query: 364 TQGGANTQGRSLDKRIRSRIAFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRS 423
           T GGAN QGRSLDKRIRSRIAFF+ESST+    L+EAKKRLTHFIRQ NDLRFAGT K +
Sbjct: 303 TMGGANAQGRSLDKRIRSRIAFFVESSTSEKNCLSEAKKRLTHFIRQANDLRFAGTTKTT 362

Query: 424 ISLFPFFGATITLSSIKKKQEHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSP 483
           ISLFPFFGAT                                                 P
Sbjct: 363 ISLFPFFGATFFF----------------------------------------------P 422

Query: 484 KDFPLVELGAAICEREGMDKNLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGW 543
           +D              G+  NLFFED RE+LLGQLRIK WNLMGKDKV+ELIEKFI+LG 
Sbjct: 423 RD------------GVGVYNNLFFEDAREQLLGQLRIKCWNLMGKDKVMELIEKFINLGG 482

Query: 544 IGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQS 603
           IGELIKGIEMMIEIILRNRRIP GYNSYLNE++KMRS LSNRT TNTLIES+K+KSVYQS
Sbjct: 483 IGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNTLIESIKMKSVYQS 542

Query: 604 ASPIAQDISFQLRKKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECG 663
           ASPIAQDISFQLR KTRSFRSI S+        M KGVEGIRICCSGR EGAEIARTECG
Sbjct: 543 ASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECG 602

Query: 664 KYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISYIKKKKEGVISETCSRGCKPDGTQL 723
           KYGKTSRNVF+QKIDYAPAEVSTRYGISG                   CSRGCK DGTQL
Sbjct: 603 KYGKTSRNVFNQKIDYAPAEVSTRYGISG------------------RCSRGCKLDGTQL 662

Query: 724 GFGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXNGQIWVRVLADLPITGKPT 783
           GFGRYGT+SC+AGRLSYRAIEAARRA+ GQF          NG+IWVRVLADLPITGKPT
Sbjct: 663 GFGRYGTKSCKAGRLSYRAIEAARRAIIGQFHRAMSGQFRRNGKIWVRVLADLPITGKPT 668

Query: 784 EVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS 838
           EVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS
Sbjct: 723 EVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS 668

[Close]

BLAST of CsaV3_UNG208600 vs. NCBI nr
Match: AEN56097.1 (ribosomal protein S3 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 995.0 bits (2571), Expect = 1.6e-286
Identity = 537/635 (84.57%), Postives = 547/635 (86.14%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPR--G 144
           S YYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCI+LHFPKRTF+HFFLPRRPR  G
Sbjct: 24  SDYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCILLHFPKRTFMHFFLPRRPRGLG 83

Query: 145 LKGGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRT 204
           LKGG KSKPGK EKGRWWAFGKVGPIGCLHSSED                       +RT
Sbjct: 84  LKGGAKSKPGK-EKGRWWAFGKVGPIGCLHSSEDXXXXXXXXXXXXXXXXL---IKLLRT 143

Query: 205 PHLEL--DLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILL 264
               L   L  Q+KDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILL
Sbjct: 144 APFSLIGGLPEQNKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILL 203

Query: 265 SKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKIT 324
           SKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTK FKFFFPNQSRSDGPTSHL KIT
Sbjct: 204 SKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKFFKFFFPNQSRSDGPTSHLRKIT 263

Query: 325 LPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIR 384
           LPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIR
Sbjct: 264 LPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIR 323

Query: 385 SRIAFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIK 444
           SRIAFFLESST+   +LAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATIT S + 
Sbjct: 324 SRIAFFLESSTSEKKSLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITFSGMN 383

Query: 445 KKQEHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREG 504
           K +  ELDGTAEWDREH GFSSINKSF                                G
Sbjct: 384 KSK--ELDGTAEWDREHSGFSSINKSFG-------------------------------G 443

Query: 505 MDKNLFFEDTREELLGQLRIKSWNLMGK----DKVIELIEKFIDLGWIGELIKGIEMMIE 564
           MDKNLFFEDTRE+LLGQLRIKSWNLMGK      V+ELIEKFIDLGWIGELIKGIEMMIE
Sbjct: 444 MDKNLFFEDTREQLLGQLRIKSWNLMGKLSYHGPVMELIEKFIDLGWIGELIKGIEMMIE 503

Query: 565 IILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLR 624
           IILRNRRIP GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLR
Sbjct: 504 IILRNRRIPYGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLR 563

Query: 625 KKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQK 684
           KKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQK
Sbjct: 564 KKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQK 621

Query: 685 IDYAPAEVSTRYGISGVKVWISYIKKKKEGVISET 710
           IDYAPAEVSTRYGISGVKVWISYIKKKKEGVISET
Sbjct: 624 IDYAPAEVSTRYGISGVKVWISYIKKKKEGVISET 621

[Close]

BLAST of CsaV3_UNG208600 vs. NCBI nr
Match: PLY71284.1 (hypothetical protein LSAT_0X38040 [Lactuca sativa])

HSP 1 Score: 988.4 bits (2554), Expect = 1.5e-284
Identity = 547/794 (68.89%), Postives = 582/794 (73.30%), Query Frame = 0


Query: 49  KGSSALTLSP---GIDHGSPPYQARKKRLFPRHGGVAIDSIYYYGKSLYQDVNLRSYFGS 108
           KG   +T  P    + +GSPP   +++R    HGGV IDSIYYYGKS+YQDVNLRSYFGS
Sbjct: 6   KGFYFVTRDPPQSALVNGSPP--IKQERSGSSHGGVRIDSIYYYGKSVYQDVNLRSYFGS 65

Query: 109 IRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLKGGEKSKPGKEEKGRWWAFGKV 168
           IRPP RLTFGFRLGRCII+HFPKRTFIHFFLPRRPR  K  EKS+PGK  KG+WWAFGKV
Sbjct: 66  IRPPTRLTFGFRLGRCIIIHFPKRTFIHFFLPRRPRRQKRREKSRPGK-GKGQWWAFGKV 125

Query: 169 GPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPHLELDLLPQDKDALEAEKRVES 228
           GPIGCLHSS+  EEER E                                   A KRVES
Sbjct: 126 GPIGCLHSSDGTEEERNEVRGRG------------------------------AGKRVES 185

Query: 229 IRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLLRVSGGAFKHPKYAGVVNDIAF 288
           IRL DREKQ  IRIWPKKK+ YGYHDRSPS K  LSK LRVS GAFKHPKYAG+VNDIA 
Sbjct: 186 IRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVS-GAFKHPKYAGLVNDIAL 245

Query: 289 LIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAVRSSFHYLVMQYLLNTKNKMHF 348
           L  NDDSFRKTKLFKFFF  +S SD PTSH LK TLPAVR S +Y VMQYLL TKN+MHF
Sbjct: 246 L--NDDSFRKTKLFKFFFSKKSPSDSPTSHPLKRTLPAVRPSLNYSVMQYLLKTKNQMHF 305

Query: 349 DPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIAFFLESSTT--LTLAEAKKRLT 408
           DPV VLNHFV PGV EPST GGAN QGRSLDKRI  R AFF+ESST+    LAE KK LT
Sbjct: 306 DPVVVLNHFVEPGVVEPSTMGGANAQGRSLDKRI--RFAFFVESSTSEKKFLAEDKK-LT 365

Query: 409 HFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHELDGTAEWDREHEGFSSINK 468
           HFIR  +  RFAGT K +ISLFPFFGAT                                
Sbjct: 366 HFIRWSDHPRFAGTTKTTISLFPFFGATFFF----------------------------- 425

Query: 469 SFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLFFEDTREELLGQLRIKSWNL 528
                            P+D              G+ KNLFFE  RE+LL + R K WNL
Sbjct: 426 -----------------PRD------------GVGVYKNLFFEYAREQLLRKFRKKCWNL 485

Query: 529 MGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNR 588
             KDKV+ELIEKFIDLG IGELIKGIEMMIEIILRNRRIP GYN YLNEV+KMRS LSNR
Sbjct: 486 TAKDKVMELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNR 545

Query: 589 TKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSILSQXXXXXXXXMNKGVEGIR 648
           TKTNTLIESVKIKSVYQSASPIAQDISFQ R KTRSFRSI SQ        M KGVEGIR
Sbjct: 546 TKTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIR 605

Query: 649 ICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISYIKKKKE 708
           ICCSGRSEGAEIARTECGKYGKTS NVF+QKIDYAPAEVSTRYGISGVKVWISY +K++ 
Sbjct: 606 ICCSGRSEGAEIARTECGKYGKTSSNVFNQKIDYAPAEVSTRYGISGVKVWISYSQKERG 665

Query: 709 GVISETCSRGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXN 768
             ISETCSRGCKPDGT+LGFGRYGT+S RAGRLSYRAIEAARRA+ GQF          N
Sbjct: 666 RAISETCSRGCKPDGTRLGFGRYGTKSLRAGRLSYRAIEAARRAIIGQFHRTMSGQFRRN 702

Query: 769 GQIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLA 828
           G+IWVRVLADLPITG+PTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLA
Sbjct: 726 GKIWVRVLADLPITGEPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLA 702

Query: 829 AHKPCSSTKFVQWS 838
           AHK CSSTKFVQWS
Sbjct: 786 AHKLCSSTKFVQWS 702

[Close]

BLAST of CsaV3_UNG208600 vs. NCBI nr
Match: EPS74728.1 (hypothetical protein M569_00003, partial [Genlisea aurea])

HSP 1 Score: 905.2 bits (2338), Expect = 1.6e-259
Identity = 510/777 (65.64%), Postives = 543/777 (69.88%), Query Frame = 0


Query: 78  HGGVAIDSIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLP 137
           H GV IDSIYYYGKS+YQD+NLRSYFGSIRPP RLTFGFRLGRCIILHFPK  FIHFFLP
Sbjct: 12  HDGVTIDSIYYYGKSVYQDLNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKIAFIHFFLP 71

Query: 138 RRPRGLKGGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSF 197
           RRP+     EKS+PGK  KGRWW  G++GPIG LHSS+  EEER E              
Sbjct: 72  RRPQRPNRREKSRPGK-AKGRWWELGQIGPIGWLHSSDGTEEERNE-------------V 131

Query: 198 GGVRTPHLELDLLPQDKDALEAEKRVESIRLSD--------------REKQKAIRIWPKK 257
           GG                   + KRVESIR  D               +K+  IRIWP K
Sbjct: 132 GG-----------------RGSGKRVESIRFEDARPKGRVRMDGFQKMKKENEIRIWP-K 191

Query: 258 KEGYGYHDRSPSRKILLSKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF 317
           KE YGYHDRSP  K  LSK L+VS G FKHPKYAGVVN ++FLIENDDSF KTKLFKFFF
Sbjct: 192 KEHYGYHDRSPWIKKNLSKELQVS-GTFKHPKYAGVVNGMSFLIENDDSFIKTKLFKFFF 251

Query: 318 PNQSRSDGPTSHLLKITLPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPS 377
           P +SRSD PTSHL + TLPAVRSS +Y VMQYLLNTKNKMHFD   VLNHFVAPGVAEPS
Sbjct: 252 PKKSRSDSPTSHLQQRTLPAVRSSLNYSVMQYLLNTKNKMHFDSGGVLNHFVAPGVAEPS 311

Query: 378 TQGGANTQ-GRSLDKRIRSRIAFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKR 437
           T GG N Q G   DKRIRSRIAFF+ESST+     AE KKRLTHFIRQ NDLRFAGTRK 
Sbjct: 312 TMGGDNAQDGWKEDKRIRSRIAFFVESSTSEKKCFAEPKKRLTHFIRQANDLRFAGTRKP 371

Query: 438 SISLFPFFGATITLSSIKKKQEHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRS 497
           +ISLFPFFGAT                                                 
Sbjct: 372 TISLFPFFGATFFF---------------------------------------------- 431

Query: 498 PKDFPLVELGAAICEREGMDKNLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLG 557
           P+D              G+  NLFFE+ RE+LLGQ   K WNLM K+KV+ELIEKFIDLG
Sbjct: 432 PRD------------GVGVYNNLFFENAREQLLGQCWRKCWNLMAKNKVMELIEKFIDLG 491

Query: 558 WIGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQ 617
            IGELIKGIEMMI+IILRNRRIP G NSYLNEV+KMRS LSNRT TNT IESVKIKSVYQ
Sbjct: 492 RIGELIKGIEMMIDIILRNRRIPYGLNSYLNEVKKMRSLLSNRTATNTNIESVKIKSVYQ 551

Query: 618 SASPIAQDISFQLRKKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTEC 677
           SASPIAQDISFQL  KTRSFRSIL+Q        M KGV GIRICCSGRS+GAEIARTEC
Sbjct: 552 SASPIAQDISFQLSTKTRSFRSILTQIVSNIPLVMKKGVTGIRICCSGRSKGAEIARTEC 611

Query: 678 GKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISYIKKKKEGVISETCSRGCKPDGTQ 737
           GKYGKTSRNVF+QKIDYA AEVSTRYGI G                   CSR CKPDGTQ
Sbjct: 612 GKYGKTSRNVFNQKIDYASAEVSTRYGILG------------------RCSRSCKPDGTQ 671

Query: 738 LGFGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXNGQIWVRVLADLPITGKP 797
           LGFGRYGTQSCRAGRLSYRAIEAARRA+ G F          NG +WVRV AD+PITGKP
Sbjct: 672 LGFGRYGTQSCRAGRLSYRAIEAARRAIIGHFHRAMSGQFRRNGLLWVRVFADIPITGKP 679

Query: 798 TEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS 838
           TEVRMGRGKGNPTGWIARVSTGQI FEMDGVSLSNARQAATLAAHK C STKFVQWS
Sbjct: 732 TEVRMGRGKGNPTGWIARVSTGQILFEMDGVSLSNARQAATLAAHKLCLSTKFVQWS 679

[Close]

BLAST of CsaV3_UNG208600 vs. TAIR10
Match: ATMG00090.1 (structural constituent of ribosome;protein binding)

HSP 1 Score: 690.6 bits (1781), Expect = 1.2e-198
Identity = 397/629 (63.12%), Postives = 434/629 (69.00%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 144
           S YYYGK +YQDVNLRSYFGSIRPP RLTFGFRLGRCIILHFPKRTFIHFFLPRRPR LK
Sbjct: 24  SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLK 83

Query: 145 GGEKSKPGKEEKGRWW-AFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTP 204
             EK++PGK EKGRWW  FGK GPI CLHSS+D EEER E                    
Sbjct: 84  RREKTRPGK-EKGRWWTTFGKAGPIECLHSSDDTEEERNEVRGRG--------------- 143

Query: 205 HLELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKL 264
                          A KRVESIRL DR+KQ  IR WPKKK+ YGYHDR PS K  LSK 
Sbjct: 144 ---------------ARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKS 203

Query: 265 LRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPA 324
           LR+S GAFKHPKYAGVVNDIAFLIENDDSF+KTKLFK FF N+SRSDGPTS+L   TLPA
Sbjct: 204 LRIS-GAFKHPKYAGVVNDIAFLIENDDSFKKTKLFKLFFQNKSRSDGPTSYLR--TLPA 263

Query: 325 VRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRI 384
           VR S ++LVMQY  NTKN+++FDPV VLNHFVAPG AEPST G AN QGRSL KRIRSRI
Sbjct: 264 VRPSLNFLVMQYFFNTKNQINFDPVVVLNHFVAPGAAEPSTMGRANAQGRSLQKRIRSRI 323

Query: 385 AFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQ 444
           AFF+ESST+    LAEAK RLTHFIR  NDLRFAGT K +ISLFPFFGAT          
Sbjct: 324 AFFVESSTSEKKCLAEAKNRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLR----- 383

Query: 445 EHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDK 504
               DG                                                  G+  
Sbjct: 384 ----DGV-------------------------------------------------GVYN 443

Query: 505 NLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRR 564
           NL   D RE+LL QLR+K WNL+GKDK++ELIEK  +LG I ELIK I+MMIEIILR R 
Sbjct: 444 NL---DAREQLLNQLRVKCWNLVGKDKIMELIEKLKNLGGIEELIKVIDMMIEIILRKRG 503

Query: 565 IPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFR 624
           IP  YNSY  EV+KMRSFLSNRT T TLIESVKIKSVYQSASPIAQDISFQL+ K RSF 
Sbjct: 504 IPYRYNSYFYEVKKMRSFLSNRTNTKTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFH 553

Query: 625 SILSQXXXXXXXXMNKGVEGIRICCSGR-SEGAEIARTECGKYGKTSRNVFHQKIDYAPA 684
           SI ++        + KGVEGIRIC SGR  + AE A+T+C K+ KTSRNVF+ KIDYAPA
Sbjct: 564 SIFAK----IVKEIPKGVEGIRICFSGRLKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPA 553

Query: 685 EVSTRYGISGVKVWISYIKKKKEGVISET 710
           EVSTRYGISGVKVWISY +KK    ISET
Sbjct: 624 EVSTRYGISGVKVWISYSQKKGRRAISET 553

[Close]

BLAST of CsaV3_UNG208600 vs. TAIR10
Match: ATMG00080.1 (ribosomal protein L16)

HSP 1 Score: 229.6 bits (584), Expect = 7.3e-60
Identity = 109/128 (85.16%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 710 CSRGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXNGQIWVR 769
           CSRGCKPDGT+LGFGRYGT+SC+AGRLSYRAIEAARRA+ G F          NG+IWVR
Sbjct: 52  CSRGCKPDGTKLGFGRYGTKSCKAGRLSYRAIEAARRAIIGHFHRAMSGQFRRNGKIWVR 111

Query: 770 VLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCS 829
           V ADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSL+NARQAATLAAHKPCS
Sbjct: 112 VFADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLANARQAATLAAHKPCS 171

Query: 830 STKFVQWS 838
           STKFVQWS
Sbjct: 172 STKFVQWS 179

[Close]

BLAST of CsaV3_UNG208600 vs. TAIR10
Match: ATCG00790.1 (ribosomal protein L16)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-18
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 712 RGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXNGQIWVRVL 771
           +G    G ++ FGRY  Q+     ++ R IEA RRAM+              G+IWVR+ 
Sbjct: 18  KGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMT--------RNVRRGGKIWVRIF 77

Query: 772 ADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSST 831
            D P+T +P E RMG GKG+P  W+A V  G+I +EM GV  + AR+A ++AA K    T
Sbjct: 78  PDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKT 132

Query: 832 KFV 835
           +F+
Sbjct: 138 QFI 132

[Close]

BLAST of CsaV3_UNG208600 vs. TAIR10
Match: AT2G28830.1 (PLANT U-BOX 12)

HSP 1 Score: 79.7 bits (195), Expect = 9.3e-15
Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 725 RYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXNGQIWVRVLADLPITGKPTEVR 784
           RY  Q+     ++ R IEA RRAM+                + V + AD P+T +P E R
Sbjct: 858 RYALQTLEPAWITSRQIEAGRRAMTRNIGRGL--------TVRVHIFADKPVTVRPPETR 917

Query: 785 MGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFV 835
           MGRGKG P  W+A V  G+I +EM GVS   AR+A ++AA K  + TKF+
Sbjct: 918 MGRGKGAPAFWVAVVKPGKIIYEMGGVSEKVAREAISIAASKLPAKTKFI 959

[Close]

BLAST of CsaV3_UNG208600 vs. TAIR10
Match: ATCG00800.1 (structural constituent of ribosome)

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-07
Identity = 34/106 (32.08%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 590 IESVKIKSVYQSASPIAQDISFQLRKKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGR 649
           I   +I + Y   + +A+ I+ QL+ +  SFR  + +          K   GI++  +GR
Sbjct: 112 IAITRISNPYGDPNILAEFIAGQLKNRV-SFRKAMKKAIELTEQANTK---GIQVQIAGR 171

Query: 650 SEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWI 696
            +G EIAR E  + G+        KIDY    V T YG+ G+K+WI
Sbjct: 172 IDGKEIARVEWIREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWI 213

[Close]

BLAST of CsaV3_UNG208600 vs. Swiss-Prot
Match: sp|P27754|RT03_OENBE (Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3 SV=2)

HSP 1 Score: 790.0 bits (2039), Expect = 2.5e-227
Identity = 433/617 (70.18%), Postives = 459/617 (74.39%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 144
           S YYYGKS+YQDVNLRSYFGSIRPP RLTFGFRLGRCIILHFPKRTFIHFFLPRRPR LK
Sbjct: 24  SDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLK 83

Query: 145 GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH 204
            G+KS+PGK EK RWW FGKVGPIGCLHS++D EEER E              GG     
Sbjct: 84  RGKKSRPGK-EKARWWEFGKVGPIGCLHSNDDTEEERNE-------------VGG----- 143

Query: 205 LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL 264
                         A KRVESIRL DREKQ  IRIWPKKK+GYGYHDRSPS K  LSK L
Sbjct: 144 ------------RGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSL 203

Query: 265 RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV 324
           RVS GAFKHPKYAGV+NDIAFLIENDDSFRKTKLFKFFFP +SRSDGPTSHLLK T PAV
Sbjct: 204 RVS-GAFKHPKYAGVLNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTPPAV 263

Query: 325 RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA 384
           R S +Y VMQY LNTKN+MHFDP+ VLNHFVAPGVAEPST GGAN QGRS + RIRSRIA
Sbjct: 264 RPSLNYSVMQYYLNTKNQMHFDPLVVLNHFVAPGVAEPSTMGGANRQGRSNELRIRSRIA 323

Query: 385 FFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQE 444
           FF+ESST+   +LAE KK L HFIRQ NDLRFAG  K +ISLFPFFGAT           
Sbjct: 324 FFVESSTSEKKSLAEDKKGLPHFIRQENDLRFAGRTKTTISLFPFFGATFFF-------- 383

Query: 445 HELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKN 504
                                                 P+D              G+ K+
Sbjct: 384 --------------------------------------PRD------------GVGVYKH 443

Query: 505 LFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRI 564
           LFFED RE+LLGQLRIK W LMGKDKV+ELIEKFIDLG IGELIKGIE+MIEIILRNRRI
Sbjct: 444 LFFEDAREQLLGQLRIKCWKLMGKDKVMELIEKFIDLGGIGELIKGIEIMIEIILRNRRI 503

Query: 565 PVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRS 624
           P GYNSYLNEV+KMRS LSNRTKTNT+IESVKIKSVYQSASPIAQDISFQ R K RSFRS
Sbjct: 504 PYGYNSYLNEVKKMRSLLSNRTKTNTIIESVKIKSVYQSASPIAQDISFQPRNKRRSFRS 550

Query: 625 ILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEV 684
           I SQ        M KGVEGIRICCSGRS+GAEIARTECGKYGKTSRNVF+QKIDYAPAEV
Sbjct: 564 IFSQIVKDIPLVMKKGVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 550

Query: 685 STRYGISGVKVWISYIK 700
           STRYGI GVKVWISY K
Sbjct: 624 STRYGILGVKVWISYSK 550

[Close]

BLAST of CsaV3_UNG208600 vs. Swiss-Prot
Match: sp|Q04716|RT03_PETHY (Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 7.3e-227
Identity = 435/625 (69.60%), Postives = 456/625 (72.96%), Query Frame = 0


Query: 87  YYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLKGG 146
           YYYGKS+YQDVNLRSYFGSIRPP RLTFGFRLGRCIILHFPKRTFIHFFLPRRPR LK  
Sbjct: 25  YYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKXX 84

Query: 147 EKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPHLE 206
            KS+P K EKGRW AF  VGPIGCLHSS+  EEER E                       
Sbjct: 85  XKSRPVK-EKGRWGAFXXVGPIGCLHSSDGTEEERNEVRGRG------------------ 144

Query: 207 LDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLLRV 266
                       A KRVESIRL DREKQ  IRIWPKKK+GYGYHDRSPS K  LSK LRV
Sbjct: 145 ------------AGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRV 204

Query: 267 SGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAVRS 326
           S GAFKHPKYAG+ NDIAFLIENDDSFRKT LFKFFFP +SRSD PTSHLLK TLPAVR 
Sbjct: 205 S-GAFKHPKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRP 264

Query: 327 SFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIAFF 386
           S +Y VMQYLLNTKNK+HFDPV VLNHFVAPGVAEPST GGAN QGRSLDKRI S IAFF
Sbjct: 265 SLNYSVMQYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIASCIAFF 324

Query: 387 LESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHE 446
           +E+ST+    LAEAKKR+THFIRQ NDLRFAGT K +ISLFPFFGAT             
Sbjct: 325 VENSTSEKKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFF---------- 384

Query: 447 LDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLF 506
                                               P+D              G+  NLF
Sbjct: 385 ------------------------------------PRD------------GVGVYNNLF 444

Query: 507 FEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPV 566
           FED RE+LLGQLR K WNLMGKDKV+ELIEKFIDL  IGELI+GIEMMIEIILRNRRIP 
Sbjct: 445 FEDAREQLLGQLRRKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRIPY 504

Query: 567 GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIL 626
           GYN YLNEV+KMRS L NRT TNTLIESVKIKSVYQSASPIAQDISFQ R KTRSFRSI 
Sbjct: 505 GYNYYLNEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIF 559

Query: 627 SQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVST 686
           S+        M KGVEGIRICCSGR EGAEIARTECGKYGKTSRNVF+QKIDYAPAEVST
Sbjct: 565 SKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVST 559

Query: 687 RYGISGVKVWISYIKKKKEGVISET 710
           RYGISGVKVWISY KKKK   ISET
Sbjct: 625 RYGISGVKVWISYSKKKKGRAISET 559

[Close]

BLAST of CsaV3_UNG208600 vs. Swiss-Prot
Match: sp|P27928|RT03_MAIZE (Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 1.4e-214
Identity = 428/628 (68.15%), Postives = 447/628 (71.18%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 144
           S YYYGKSLYQDVNLRSYF SIRPP RLTFGFRLGRCIILHFPKRTFIHFFLPRRP  LK
Sbjct: 24  SDYYYGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPLRLK 83

Query: 145 GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH 204
             +KS+PGK +KGRWWAFGKVGPIGCLHSSE  EEER E                     
Sbjct: 84  RRDKSRPGK-DKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRG---------------- 143

Query: 205 LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL 264
                         A KRVESI   DREKQ  IRIWPKK + YGYHDR+PSRK   SK L
Sbjct: 144 --------------AGKRVESI---DREKQNEIRIWPKKMQRYGYHDRTPSRKKNFSKSL 203

Query: 265 RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF-PNQSRSDGPTSHLLKITLPA 324
           RVS GAFKHPKYAGVVNDIAFLIENDDSF KTKLFKFFF P +SRSDGPTSHLLK TLPA
Sbjct: 204 RVS-GAFKHPKYAGVVNDIAFLIENDDSFIKTKLFKFFFLPKKSRSDGPTSHLLKRTLPA 263

Query: 325 VRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRI 384
           VR S +Y VMQY  NTKNKMHFDPV VLNHFVAPGVAEPST GGA  +G SLDKRIRSRI
Sbjct: 264 VRPSLNYSVMQYFFNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRI 323

Query: 385 AFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQ 444
           AFF+ESST+    LA AKKRL HFIRQ NDLRFAGT K +ISLFPFFGAT   S      
Sbjct: 324 AFFVESSTSDKKCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFSR----- 383

Query: 445 EHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDK 504
               DG                                                  G+  
Sbjct: 384 ----DGV-------------------------------------------------GVYN 443

Query: 505 NLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRR 564
           N F+E  RE+LLGQLRIK  NLMGKDKV+ELIEKFIDLG IG+LIKGIEMMIEIILR RR
Sbjct: 444 NPFYEYAREQLLGQLRIKCRNLMGKDKVMELIEKFIDLGRIGKLIKGIEMMIEIILRKRR 503

Query: 565 IPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFR 624
           IP GYNSYLNEVQKMRSFLSNRT TNTLIESVKIKSVYQSAS IAQDISFQLR    SFR
Sbjct: 504 IPYGYNSYLNEVQKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFR 556

Query: 625 SILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAE 684
           SI S+        M KGVEGIRICCSGR  GAEIARTECGKYGKTS NVF+QKIDYAPAE
Sbjct: 564 SIFSKIVKDIPLIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAE 556

Query: 685 VSTRYGISGVKVWISYIKKKKEGVISET 710
           VSTR GISGVKV ISY + KK   ISET
Sbjct: 624 VSTRDGISGVKVRISYSQNKKGRAISET 556

[Close]

BLAST of CsaV3_UNG208600 vs. Swiss-Prot
Match: sp|P46773|RT03_ORYSJ (Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 3.2e-198
Identity = 408/627 (65.07%), Postives = 424/627 (67.62%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 144
           S YYYGKSLYQDVNLRSYF SIRPP  LTFGFRLGRCIILHFPKRTFIHFFLPRRP  LK
Sbjct: 24  SDYYYGKSLYQDVNLRSYFSSIRPPTILTFGFRLGRCIILHFPKRTFIHFFLPRRPLRLK 83

Query: 145 GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH 204
             +KS+PGK +KGRWWAFGKVGPIGCLHSSE  EEER E                     
Sbjct: 84  RRDKSRPGK-DKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRG---------------- 143

Query: 205 LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL 264
                         A KRVESI   DREKQ  IRIWPKK + YGYHDRSPSRK   SK L
Sbjct: 144 --------------AGKRVESI---DREKQNEIRIWPKKMQRYGYHDRSPSRKKNFSKSL 203

Query: 265 RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV 324
           RVS GAFKHPKYAGVVNDIAFLIEN                    DGPTSHLLK TLPAV
Sbjct: 204 RVS-GAFKHPKYAGVVNDIAFLIEN--------------------DGPTSHLLKRTLPAV 263

Query: 325 RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA 384
           R S +Y VMQY  NTKNKMHFDPV VLNHFVAPGVAEPST GGA  +G SLDKRIRSRIA
Sbjct: 264 RPSLNYSVMQYFFNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRIA 323

Query: 385 FFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQE 444
           FF+ESST+    LA AKKRL HFIRQ NDLRFAGT K +ISLFPFFGAT           
Sbjct: 324 FFVESSTSEKKCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF-------- 383

Query: 445 HELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKN 504
                                                 P+D              G+  N
Sbjct: 384 --------------------------------------PRD------------GVGVYNN 443

Query: 505 LFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRI 564
            FFE  RE+LLGQLRIK  NLMGKDKV+ELIEKFI LG IG+LIKGIEMMIEIILR R I
Sbjct: 444 PFFEYAREQLLGQLRIKCRNLMGKDKVMELIEKFIYLGRIGKLIKGIEMMIEIILRKRII 503

Query: 565 PVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRS 624
           P GYNSYLNEVQKMRSFLSNRT TNTLIESVKIKSVYQSAS IAQDISFQL     SFRS
Sbjct: 504 PYGYNSYLNEVQKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRS 535

Query: 625 ILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEV 684
           I SQ        M KGVEGIRICCSGR  GAEIARTECGKYGKTS NVF+QKIDYA AEV
Sbjct: 564 IFSQIVKDIPLIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEV 535

Query: 685 STRYGISGVKVWISYIKKKKEGVISET 710
           STR GISGVKV ISY + KK   ISET
Sbjct: 624 STRNGISGVKVRISYSQNKKGRAISET 535

[Close]

BLAST of CsaV3_UNG208600 vs. Swiss-Prot
Match: sp|Q95749|RT03_ARATH (Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS3 PE=2 SV=3)

HSP 1 Score: 677.6 bits (1747), Expect = 1.8e-193
Identity = 392/629 (62.32%), Postives = 429/629 (68.20%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 144
           S YYYGK +YQDVNLRSYFGSIRPP RLTFGFRLGRCIILHFPKRTFIHFFLPRRPR LK
Sbjct: 24  SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLK 83

Query: 145 GGEKSKPGKEEKGRWW-AFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTP 204
             EK++PGK EKGRWW  FGK GPI CLHSS+D EEER E                    
Sbjct: 84  RREKTRPGK-EKGRWWTTFGKAGPIECLHSSDDTEEERNEVRGRG--------------- 143

Query: 205 HLELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKL 264
                          A KRVESIRL DR+KQ  IR WPKKK+ YGYHDR PS K  LSKL
Sbjct: 144 ---------------ARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKL 203

Query: 265 LRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPA 324
           LR+S GAFKHPKYAGVVNDIAFLIENDDSF+KTKLFK FF N+SRSDGPTS+L   TLPA
Sbjct: 204 LRIS-GAFKHPKYAGVVNDIAFLIENDDSFKKTKLFKLFFQNKSRSDGPTSYLR--TLPA 263

Query: 325 VRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRI 384
           VR S ++LVMQY  NTKN+++FDPV VLNHFVAPG AEPST G AN QGRSL KRIRSRI
Sbjct: 264 VRPSLNFLVMQYFFNTKNQINFDPVVVLNHFVAPGAAEPSTMGRANAQGRSLQKRIRSRI 323

Query: 385 AFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQ 444
           AFF+ES T+    LAEAK RLTHFIR  NDLRFAGT K +ISLFPFFGAT          
Sbjct: 324 AFFVESLTSEKKCLAEAKNRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLR----- 383

Query: 445 EHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDK 504
               DG                                                  G+  
Sbjct: 384 ----DGV-------------------------------------------------GVYN 443

Query: 505 NLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRR 564
           NL   D RE+LL QLR+K WNL+GKDK++ELIEK  +LG I ELIK I+MMIEIILR R 
Sbjct: 444 NL---DAREQLLNQLRVKCWNLVGKDKIMELIEKLKNLGGIEELIKVIDMMIEIILRKRG 503

Query: 565 IPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFR 624
           IP  YNSY  EV+KMRSFLSNRT T TLIESVKIKSVYQSAS IAQDISFQL+ K RSF 
Sbjct: 504 IPYRYNSYFYEVKKMRSFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFH 553

Query: 625 SILSQXXXXXXXXMNKGVEGIRICCSGR-SEGAEIARTECGKYGKTSRNVFHQKIDYAPA 684
           SI ++        + KGVEGIRIC SGR  + AE A+T+C K+ KTS NVF+ KIDYAP 
Sbjct: 564 SIFAK----IVKEIPKGVEGIRICFSGRLKDAAEKAQTKCYKHRKTSCNVFNHKIDYAPV 553

Query: 685 EVSTRYGISGVKVWISYIKKKKEGVISET 710
           EV TRYGI GVKVWISY +KK    ISET
Sbjct: 624 EVFTRYGILGVKVWISYSQKKGRRAISET 553

[Close]

BLAST of CsaV3_UNG208600 vs. TrEMBL
Match: tr|G3EIY5|G3EIY5_CUCSA (Ribosomal protein S3 OS=Cucumis sativus OX=3659 GN=rps3 PE=3 SV=1)

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 624/625 (99.84%), Postives = 624/625 (99.84%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 144
           S YYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK
Sbjct: 24  SDYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLK 83

Query: 145 GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH 204
           GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH
Sbjct: 84  GGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPH 143

Query: 205 LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL 264
           LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL
Sbjct: 144 LELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLL 203

Query: 265 RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV 324
           RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV
Sbjct: 204 RVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAV 263

Query: 325 RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA 384
           RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA
Sbjct: 264 RSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIA 323

Query: 385 FFLESSTTLTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHE 444
           FFLESSTTLTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHE
Sbjct: 324 FFLESSTTLTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHE 383

Query: 445 LDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLF 504
           LDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLF
Sbjct: 384 LDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLF 443

Query: 505 FEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPV 564
           FEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPV
Sbjct: 444 FEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPV 503

Query: 565 GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIL 624
           GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIL
Sbjct: 504 GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIL 563

Query: 625 SQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVST 684
           SQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVST
Sbjct: 564 SQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVST 623

Query: 685 RYGISGVKVWISYIKKKKEGVISET 710
           RYGISGVKVWISYIKKKKEGVISET
Sbjct: 624 RYGISGVKVWISYIKKKKEGVISET 648

[Close]

BLAST of CsaV3_UNG208600 vs. TrEMBL
Match: tr|B9TAP3|B9TAP3_RICCO (60S ribosomal protein L16, putative OS=Ricinus communis OX=3988 GN=RCOM_2145580 PE=3 SV=1)

HSP 1 Score: 1014.2 bits (2621), Expect = 1.7e-292
Identity = 548/776 (70.62%), Postives = 582/776 (75.00%), Query Frame = 0


Query: 64  SPPYQARKKRLFPRHGGVAIDSIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCII 123
           +PP +  +   F  HGGV IDSIYYYGKS+YQDVNLRSYFGSIRPP RLTFGFRLGRCII
Sbjct: 3   APPIKQERSGSF--HGGVTIDSIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCII 62

Query: 124 LHFPKRTFIHFFLPRRPRGLKGGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKE 183
           LHFPKRTFI+FFL RRPR LK  EK++PGK EKGRWW FGKVGPI CLHSS++ EEER E
Sbjct: 63  LHFPKRTFINFFLSRRPRRLKRREKTRPGK-EKGRWWTFGKVGPIRCLHSSDNTEEERNE 122

Query: 184 EEFHAAPLKTPCSFGGVRTPHLELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKK 243
                                              A KRVESIRL DREK+  IRIWPKK
Sbjct: 123 VRGRG------------------------------AGKRVESIRLDDREKENEIRIWPKK 182

Query: 244 KEGYGYHDRSPSRKILLSKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF 303
           K+ YGYHDRSPS K  LSK LRVS GAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF
Sbjct: 183 KQRYGYHDRSPSIKKNLSKSLRVS-GAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFF 242

Query: 304 PNQSRSDGPTSHLLKITLPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPS 363
           P +SRSDGPTSHLLK TLPAV  S +Y VMQYLLNTKN++HFDPV VLNHFVAPGVAEPS
Sbjct: 243 PKKSRSDGPTSHLLKRTLPAVCLSLNYSVMQYLLNTKNQIHFDPVVVLNHFVAPGVAEPS 302

Query: 364 TQGGANTQGRSLDKRIRSRIAFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRS 423
           T GGAN QGRSLDKRIRSRIAFF+ESST+    L+EAKKRLTHFIRQ NDLRFAGT K +
Sbjct: 303 TMGGANAQGRSLDKRIRSRIAFFVESSTSEKNCLSEAKKRLTHFIRQANDLRFAGTTKTT 362

Query: 424 ISLFPFFGATITLSSIKKKQEHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSP 483
           ISLFPFFGAT                                                 P
Sbjct: 363 ISLFPFFGATFFF----------------------------------------------P 422

Query: 484 KDFPLVELGAAICEREGMDKNLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGW 543
           +D              G+  NLFFED RE+LLGQLRIK WNLMGKDKV+ELIEKFI+LG 
Sbjct: 423 RD------------GVGVYNNLFFEDAREQLLGQLRIKCWNLMGKDKVMELIEKFINLGG 482

Query: 544 IGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQS 603
           IGELIKGIEMMIEIILRNRRIP GYNSYLNE++KMRS LSNRT TNTLIES+K+KSVYQS
Sbjct: 483 IGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNTLIESIKMKSVYQS 542

Query: 604 ASPIAQDISFQLRKKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECG 663
           ASPIAQDISFQLR KTRSFRSI S+        M KGVEGIRICCSGR EGAEIARTECG
Sbjct: 543 ASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECG 602

Query: 664 KYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISYIKKKKEGVISETCSRGCKPDGTQL 723
           KYGKTSRNVF+QKIDYAPAEVSTRYGISG                   CSRGCK DGTQL
Sbjct: 603 KYGKTSRNVFNQKIDYAPAEVSTRYGISG------------------RCSRGCKLDGTQL 662

Query: 724 GFGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXNGQIWVRVLADLPITGKPT 783
           GFGRYGT+SC+AGRLSYRAIEAARRA+ GQF          NG+IWVRVLADLPITGKPT
Sbjct: 663 GFGRYGTKSCKAGRLSYRAIEAARRAIIGQFHRAMSGQFRRNGKIWVRVLADLPITGKPT 668

Query: 784 EVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS 838
           EVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS
Sbjct: 723 EVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS 668

[Close]

BLAST of CsaV3_UNG208600 vs. TrEMBL
Match: tr|G3EU14|G3EU14_CUCME (Ribosomal protein S3 OS=Cucumis melo subsp. melo OX=412675 GN=rps3 PE=3 SV=1)

HSP 1 Score: 995.0 bits (2571), Expect = 1.0e-286
Identity = 537/635 (84.57%), Postives = 547/635 (86.14%), Query Frame = 0


Query: 85  SIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPR--G 144
           S YYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCI+LHFPKRTF+HFFLPRRPR  G
Sbjct: 24  SDYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCILLHFPKRTFMHFFLPRRPRGLG 83

Query: 145 LKGGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRT 204
           LKGG KSKPGK EKGRWWAFGKVGPIGCLHSSED                       +RT
Sbjct: 84  LKGGAKSKPGK-EKGRWWAFGKVGPIGCLHSSEDXXXXXXXXXXXXXXXXL---IKLLRT 143

Query: 205 PHLEL--DLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILL 264
               L   L  Q+KDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILL
Sbjct: 144 APFSLIGGLPEQNKDALEAEKRVESIRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILL 203

Query: 265 SKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKIT 324
           SKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTK FKFFFPNQSRSDGPTSHL KIT
Sbjct: 204 SKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKFFKFFFPNQSRSDGPTSHLRKIT 263

Query: 325 LPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIR 384
           LPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIR
Sbjct: 264 LPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIR 323

Query: 385 SRIAFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIK 444
           SRIAFFLESST+   +LAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATIT S + 
Sbjct: 324 SRIAFFLESSTSEKKSLAEAKKRLTHFIRQGNDLRFAGTRKRSISLFPFFGATITFSGMN 383

Query: 445 KKQEHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPKDFPLVELGAAICEREG 504
           K +  ELDGTAEWDREH GFSSINKSF                                G
Sbjct: 384 KSK--ELDGTAEWDREHSGFSSINKSFG-------------------------------G 443

Query: 505 MDKNLFFEDTREELLGQLRIKSWNLMGK----DKVIELIEKFIDLGWIGELIKGIEMMIE 564
           MDKNLFFEDTRE+LLGQLRIKSWNLMGK      V+ELIEKFIDLGWIGELIKGIEMMIE
Sbjct: 444 MDKNLFFEDTREQLLGQLRIKSWNLMGKLSYHGPVMELIEKFIDLGWIGELIKGIEMMIE 503

Query: 565 IILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLR 624
           IILRNRRIP GYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLR
Sbjct: 504 IILRNRRIPYGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLR 563

Query: 625 KKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQK 684
           KKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQK
Sbjct: 564 KKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQK 621

Query: 685 IDYAPAEVSTRYGISGVKVWISYIKKKKEGVISET 710
           IDYAPAEVSTRYGISGVKVWISYIKKKKEGVISET
Sbjct: 624 IDYAPAEVSTRYGISGVKVWISYIKKKKEGVISET 621

[Close]

BLAST of CsaV3_UNG208600 vs. TrEMBL
Match: tr|A0A2J6K897|A0A2J6K897_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X38040 PE=3 SV=1)

HSP 1 Score: 988.4 bits (2554), Expect = 9.8e-285
Identity = 547/794 (68.89%), Postives = 582/794 (73.30%), Query Frame = 0


Query: 49  KGSSALTLSP---GIDHGSPPYQARKKRLFPRHGGVAIDSIYYYGKSLYQDVNLRSYFGS 108
           KG   +T  P    + +GSPP   +++R    HGGV IDSIYYYGKS+YQDVNLRSYFGS
Sbjct: 6   KGFYFVTRDPPQSALVNGSPP--IKQERSGSSHGGVRIDSIYYYGKSVYQDVNLRSYFGS 65

Query: 109 IRPPERLTFGFRLGRCIILHFPKRTFIHFFLPRRPRGLKGGEKSKPGKEEKGRWWAFGKV 168
           IRPP RLTFGFRLGRCII+HFPKRTFIHFFLPRRPR  K  EKS+PGK  KG+WWAFGKV
Sbjct: 66  IRPPTRLTFGFRLGRCIIIHFPKRTFIHFFLPRRPRRQKRREKSRPGK-GKGQWWAFGKV 125

Query: 169 GPIGCLHSSEDREEERKEEEFHAAPLKTPCSFGGVRTPHLELDLLPQDKDALEAEKRVES 228
           GPIGCLHSS+  EEER E                                   A KRVES
Sbjct: 126 GPIGCLHSSDGTEEERNEVRGRG------------------------------AGKRVES 185

Query: 229 IRLSDREKQKAIRIWPKKKEGYGYHDRSPSRKILLSKLLRVSGGAFKHPKYAGVVNDIAF 288
           IRL DREKQ  IRIWPKKK+ YGYHDRSPS K  LSK LRVS GAFKHPKYAG+VNDIA 
Sbjct: 186 IRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVS-GAFKHPKYAGLVNDIAL 245

Query: 289 LIENDDSFRKTKLFKFFFPNQSRSDGPTSHLLKITLPAVRSSFHYLVMQYLLNTKNKMHF 348
           L  NDDSFRKTKLFKFFF  +S SD PTSH LK TLPAVR S +Y VMQYLL TKN+MHF
Sbjct: 246 L--NDDSFRKTKLFKFFFSKKSPSDSPTSHPLKRTLPAVRPSLNYSVMQYLLKTKNQMHF 305

Query: 349 DPVYVLNHFVAPGVAEPSTQGGANTQGRSLDKRIRSRIAFFLESSTT--LTLAEAKKRLT 408
           DPV VLNHFV PGV EPST GGAN QGRSLDKRI  R AFF+ESST+    LAE KK LT
Sbjct: 306 DPVVVLNHFVEPGVVEPSTMGGANAQGRSLDKRI--RFAFFVESSTSEKKFLAEDKK-LT 365

Query: 409 HFIRQGNDLRFAGTRKRSISLFPFFGATITLSSIKKKQEHELDGTAEWDREHEGFSSINK 468
           HFIR  +  RFAGT K +ISLFPFFGAT                                
Sbjct: 366 HFIRWSDHPRFAGTTKTTISLFPFFGATFFF----------------------------- 425

Query: 469 SFASKRVENSSRGAVRSPKDFPLVELGAAICEREGMDKNLFFEDTREELLGQLRIKSWNL 528
                            P+D              G+ KNLFFE  RE+LL + R K WNL
Sbjct: 426 -----------------PRD------------GVGVYKNLFFEYAREQLLRKFRKKCWNL 485

Query: 529 MGKDKVIELIEKFIDLGWIGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNR 588
             KDKV+ELIEKFIDLG IGELIKGIEMMIEIILRNRRIP GYN YLNEV+KMRS LSNR
Sbjct: 486 TAKDKVMELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNR 545

Query: 589 TKTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSILSQXXXXXXXXMNKGVEGIR 648
           TKTNTLIESVKIKSVYQSASPIAQDISFQ R KTRSFRSI SQ        M KGVEGIR
Sbjct: 546 TKTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIR 605

Query: 649 ICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISYIKKKKE 708
           ICCSGRSEGAEIARTECGKYGKTS NVF+QKIDYAPAEVSTRYGISGVKVWISY +K++ 
Sbjct: 606 ICCSGRSEGAEIARTECGKYGKTSSNVFNQKIDYAPAEVSTRYGISGVKVWISYSQKERG 665

Query: 709 GVISETCSRGCKPDGTQLGFGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXN 768
             ISETCSRGCKPDGT+LGFGRYGT+S RAGRLSYRAIEAARRA+ GQF          N
Sbjct: 666 RAISETCSRGCKPDGTRLGFGRYGTKSLRAGRLSYRAIEAARRAIIGQFHRTMSGQFRRN 702

Query: 769 GQIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLA 828
           G+IWVRVLADLPITG+PTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLA
Sbjct: 726 GKIWVRVLADLPITGEPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLA 702

Query: 829 AHKPCSSTKFVQWS 838
           AHK CSSTKFVQWS
Sbjct: 786 AHKLCSSTKFVQWS 702

[Close]

BLAST of CsaV3_UNG208600 vs. TrEMBL
Match: tr|A0A0E0HNP9|A0A0E0HNP9_ORYNI (Uncharacterized protein OS=Oryza nivara OX=4536 PE=3 SV=1)

HSP 1 Score: 919.5 bits (2375), Expect = 5.6e-264
Identity = 526/775 (67.87%), Postives = 545/775 (70.32%), Query Frame = 0


Query: 65  PPYQARKKRLFPRHGGVAIDSIYYYGKSLYQDVNLRSYFGSIRPPERLTFGFRLGRCIIL 124
           PP Q   KR    HG V IDSIYYYGKSLYQDVNLRSYF SIRPP  LTFGFRLGRCIIL
Sbjct: 22  PPPQ---KRSGSSHGSVTIDSIYYYGKSLYQDVNLRSYFSSIRPPTILTFGFRLGRCIIL 81

Query: 125 HFPKRTFIHFFLPRRPRGLKGGEKSKPGKEEKGRWWAFGKVGPIGCLHSSEDREEERKEE 184
           HFPKRTFIHFFLPRRP  LK  +KS+PGK +KGRWWAFGKVGPIGCLHSSE  EEER E 
Sbjct: 82  HFPKRTFIHFFLPRRPLRLKRRDKSRPGK-DKGRWWAFGKVGPIGCLHSSEGTEEERNEV 141

Query: 185 EFHAAPLKTPCSFGGVRTPHLELDLLPQDKDALEAEKRVESIRLSDREKQKAIRIWPKKK 244
                                             A KRVESI   DREKQ  IRIWPKK 
Sbjct: 142 RGRG------------------------------AGKRVESI---DREKQNEIRIWPKKM 201

Query: 245 EGYGYHDRSPSRKILLSKLLRVSGGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFP 304
           + YGYHDRSPSRK   SK LRVS GAFKHPKYAGVVNDIAFLIEN               
Sbjct: 202 QRYGYHDRSPSRKKNFSKSLRVS-GAFKHPKYAGVVNDIAFLIEN--------------- 261

Query: 305 NQSRSDGPTSHLLKITLPAVRSSFHYLVMQYLLNTKNKMHFDPVYVLNHFVAPGVAEPST 364
                DGPTSHLLK TLPAVR S +Y VMQY  NTKNKMHFDPV VLNHFVAPGVAEPST
Sbjct: 262 -----DGPTSHLLKRTLPAVRPSLNYSVMQYFFNTKNKMHFDPVVVLNHFVAPGVAEPST 321

Query: 365 QGGANTQGRSLDKRIRSRIAFFLESSTT--LTLAEAKKRLTHFIRQGNDLRFAGTRKRSI 424
            GGA  +G SLDKRIRSRIAFF+ESST+    LA AKKRL HFIRQ NDLRFAGT K +I
Sbjct: 322 MGGA--KGGSLDKRIRSRIAFFVESSTSEKKCLARAKKRLIHFIRQANDLRFAGTTKTTI 381

Query: 425 SLFPFFGATITLSSIKKKQEHELDGTAEWDREHEGFSSINKSFASKRVENSSRGAVRSPK 484
           SLFPFFGAT                                                 P+
Sbjct: 382 SLFPFFGATFFF----------------------------------------------PR 441

Query: 485 DFPLVELGAAICEREGMDKNLFFEDTREELLGQLRIKSWNLMGKDKVIELIEKFIDLGWI 544
           D              G+  N FFE  RE+LLGQLRIK  NLMGKDKV+ELIEKFI LG I
Sbjct: 442 D------------GVGVYNNPFFEYAREQLLGQLRIKCRNLMGKDKVMELIEKFIYLGRI 501

Query: 545 GELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIESVKIKSVYQSA 604
           G+LIKGIEMMIEIILR R IP GYNSYLNEVQKMRSFLSNRT TNTLIESVKIKSVYQSA
Sbjct: 502 GKLIKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRTNTNTLIESVKIKSVYQSA 561

Query: 605 SPIAQDISFQLRKKTRSFRSILSQXXXXXXXXMNKGVEGIRICCSGRSEGAEIARTECGK 664
           S IAQDISFQL     SFRSI SQ        M KGVEGIRICCSGR  GAEIARTECGK
Sbjct: 562 SLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRICCSGRLGGAEIARTECGK 621

Query: 665 YGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISYIKKKKEGVISETCSRGCKPDGTQLG 724
           YGKTS NVF+QKIDYA AEVSTR GISGVKV ISY + KK   ISET   GC+PDGTQLG
Sbjct: 622 YGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISYSQNKKGRAISET---GCEPDGTQLG 675

Query: 725 FGRYGTQSCRAGRLSYRAIEAARRAMSGQFXXXXXXXXXXNGQIWVRVLADLPITGKPTE 784
           FGRYGT+SCRAGRLSYRAIEAARRA  GQF          N +IWVRVLADLPITGKP E
Sbjct: 682 FGRYGTKSCRAGRLSYRAIEAARRATIGQFHRAMSGQFRRNCKIWVRVLADLPITGKPAE 675

Query: 785 VRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAATLAAHKPCSSTKFVQWS 838
           VRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAA LAAHKPCSSTKFVQWS
Sbjct: 742 VRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAARLAAHKPCSSTKFVQWS 675

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG208600 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004849333.1	0.0e+00	99.84	ribosomal protein S3 (mitochondrion) [Cucumis sativus] >ADZ10760.1 ribosomal pro...	[more]
EEF27073.1	2.5e-292	70.62	60S ribosomal protein L16, putative [Ricinus communis]	[more]
AEN56097.1	1.6e-286	84.57	ribosomal protein S3 (mitochondrion) [Cucumis melo subsp. melo]	[more]
PLY71284.1	1.5e-284	68.89	hypothetical protein LSAT_0X38040 [Lactuca sativa]	[more]
EPS74728.1	1.6e-259	65.64	hypothetical protein M569_00003, partial [Genlisea aurea]	[more]

BLAST of CsaV3_UNG208600 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00090.1	1.2e-198	63.12	structural constituent of ribosome;protein binding	[more]
ATMG00080.1	7.3e-60	85.16	ribosomal protein L16	[more]
ATCG00790.1	2.4e-18	39.84	ribosomal protein L16	[more]
AT2G28830.1	9.3e-15	40.91	PLANT U-BOX 12	[more]
ATCG00800.1	4.2e-07	32.08	structural constituent of ribosome	[more]

BLAST of CsaV3_UNG208600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P27754\|RT03_OENBE	2.5e-227	70.18	Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3...	[more]
sp\|Q04716\|RT03_PETHY	7.3e-227	69.60	Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=...	[more]
sp\|P27928\|RT03_MAIZE	1.4e-214	68.15	Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1	[more]
sp\|P46773\|RT03_ORYSJ	3.2e-198	65.07	Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
sp\|Q95749\|RT03_ARATH	1.8e-193	62.32	Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS3 PE=2...	[more]

BLAST of CsaV3_UNG208600 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|G3EIY5\|G3EIY5_CUCSA	0.0e+00	99.84	Ribosomal protein S3 OS=Cucumis sativus OX=3659 GN=rps3 PE=3 SV=1	[more]
tr\|B9TAP3\|B9TAP3_RICCO	1.7e-292	70.62	60S ribosomal protein L16, putative OS=Ricinus communis OX=3988 GN=RCOM_2145580 ...	[more]
tr\|G3EU14\|G3EU14_CUCME	1.0e-286	84.57	Ribosomal protein S3 OS=Cucumis melo subsp. melo OX=412675 GN=rps3 PE=3 SV=1	[more]
tr\|A0A2J6K897\|A0A2J6K897_LACSA	9.8e-285	68.89	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X38040 PE=3 SV=1	[more]
tr\|A0A0E0HNP9\|A0A0E0HNP9_ORYNI	5.6e-264	67.87	Uncharacterized protein OS=Oryza nivara OX=4536 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0019843	rRNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR020798	Ribosomal_L16_CS
IPR018280	Ribosomal_S3_CS
IPR016180	Ribosomal_L10e/L16
IPR036419	Ribosomal_S3_C_sf
IPR036920	Ribosomal_L10e/L16_sf
IPR001351	Ribosomal_S3_C
IPR000114	Ribosomal_L16

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG208600.1	CsaV3_UNG208600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000114	Ribosomal protein L16	PRINTS	PR00060	RIBOSOMALL16	coord: 790..819 score: 50.47 coord: 718..730 score: 47.69 coord: 736..747 score: 61.67 coord: 760..789 score: 57.4
IPR000114	Ribosomal protein L16	TIGRFAM	TIGR01164	TIGR01164	coord: 702..826 e-value: 2.8E-29 score: 99.8
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 612..695 e-value: 1.3E-20 score: 73.6
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	G3DSA:3.90.1170.10		coord: 717..836 e-value: 1.2E-38 score: 133.4
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	SSF54686	Ribosomal protein L16p/L10e	coord: 711..834
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	G3DSA:3.30.1140.32		coord: 598..699 e-value: 6.7E-32 score: 111.7
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	SSF54821	Ribosomal protein S3 C-terminal domain	coord: 597..697
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 699..834 e-value: 7.9E-35 score: 119.6
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 718..834 e-value: 3.19256E-34 score: 126.837
None	No IPR available	PANTHER	PTHR35928	FAMILY NOT NAMED	coord: 76..609
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 656..690
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00586	RIBOSOMAL_L16_1	coord: 761..772
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00701	RIBOSOMAL_L16_2	coord: 784..795

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_UNG208600	Cucurbita moschata (Rifu)	cmocucB0194
CsaV3_UNG208600	Bottle gourd (USVL1VR-Ls)	cuclsiB159