CsaV3_UNG208550 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_UNG208550
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	NADH dehydrogenase subunit 7
Location	scaffold18_1 : 681142 .. 684673 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTAAGAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAGGACTACTAGTTGCTCGATCAGGGCCAACGCTTTATTGCGAGCCAAAAACCTCAGCGGATCCTATAAAGAGAAAGCAGCCTAGTGGAAGAGGTTAATATTGAAAAAGAAAGAATCTCATCTTGACTCAATGAATTCAGCCTAGATCAGTTCGCAATATTCTTTGCGCCTTATAATTGTTCTTTGCGCCTAGCCTTCGGACCTGTCTTATGGGGCCTTCGTAGCTTAATAATGGGGATCTGGACGTAGTATGAATCTCGCAAGTCAAATTCTCTAATGGATAGGCCTCACGCAAACCGTAATATTCTGCCCCGTCCTCAGTCGCAGGTTAATATGGATAGTCCTTCGGACCTGTGACGCCTTCGGACTGGAGCTTTATTTTTCATTAAGAAAAAGGACCAGTCCTCCGGACGGGAAGATCAATGAACGAGTCAATGAACAAAGAACAAAGAATTTGAGAGAAAGTGAAAGATTGAACCTTTACCCTCGCGGGTACATAGGAGGTTCGGGTAAGACCTCACCCAGACTGTCTCAGTTTCACCATCACGAGGACGAAAGAGTACAAACCCACCATTCCCACGGGGCGGTATGACGGGGTCTAAGCTAAGCCGGGAACATCACTCGCCCAGAGGTTTAGGCTCAAAGAATTATCGATAGGCTTTATGGAACCGCAAAATTAACTGGGAGTCTTCCCTCAAATCCTTTGAGCCTTGTTTTGTCTTCTTTCTCTTTCTTCAGTCCTTCTCTCGCAATATTCTTTGCGCCTTGCTTTCCTTGATAGCTGCTAGCCTAAAAGGTAATGAAGTTGGAAGGAACTCGACGGAGTTGACGAAGTTGAGATCAGAAGCTCGCCAGCCCTGAATTCTCATTAATAGAAGGGATTCACTGGATGAAAGTGTGACGAGAGTCAGACGTGAAGAACTGCTCTGTCTAAGTTAGCGCGTAGTGGGGATTTCTCAGTCCGTTCGGAAGCTACTGTAGGAGTTCCAGAGATTGACCGATACTGGGAAGATCTTCAGAGACGCCCACTGCACCTGGGAATCTTTCTCTTGACTTCAAGGCCCAGCCCTTCATGAAAGGCCAGCCCTTCATTAGTCAAGGGAATGAGAAGGCCCACGGAGCGGTATACCAGCGGGAGCGGGGGATAAGTGGAATTCCCCCATTCAAGGAAGAAGATGGGAATCGAGTGAGGATCTCTTCTCGCTGTGCTCGCATAGCTCTTGGTCTTCTGGTTACGGGCTATTCATTTTTGATGAAAGAAGTAGGATCACGTACGGATTGAATTGAACTCGACTCTCAGATAGAGGCGTCTTGCCCAAATTCCCCATGAAATGAGAGAGAACTTCTCCTTCCCCATAAAGGGAAAATGTCCTGATTTTAGGCTTTTCTTCTATTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAATGATATTTGTCGAAGATTCCTTTCTCAAATTCTTTCTCATATTTCTAAATATTAGTGGAAGGCAATCGCATCGCAAATTCTTTGCGCCTCCAATTCCCCGTCACCTGTCCATCAAAGAAAGGTCCAGGTGATTTATCCGTAGTCCGGAGGACTTTCCGTAATTAACCGAACTTTGCGCCTAGCCTTCGGACCTGTCTTATGGCACCGCTACGTGGGGTCTGAAACTGCTTTATAAAGGATCATGACTCTTTGAATTTCATGGATAAACAAGTCCGGAGGACGGGGTCCAGATGCGCGAAGCGAAGCGACTGGAAGGCGCAAAGAATATTGCGTTGATGAGTGCAAGGCTTCAAGATTTTTCTACCGCACCGTGGGGGAGTCAGAAACCGCATCTTTGCAAATATGAAGGCGCGAAGCGAAGCGCATGAATTAAAGAGAGAAAGATAGGCTGAATTCATTGAGTGAAACCTATTCAAACCGTCGTCAGGACCCTTATTTCCATTATTTTGATATCTCCGAAAGTCAGGCAATATCCATATTCAGTGGAATTCAATATTCTTTCAGTTCCATCAAAGAAAGGTCCAGGGTCCTACGTGCCAAAGAAAGGTCCAGGGTCCGGAGTCCGCAGGGCCAAAGAAAGGTCCAGGTGATTTATCCGTAGGACCATCCGTAATTAACAGAAGTAGGACCATCCATATGGAAGGAAGGACTCTAAAACGGAGTGGGCAAATTTCATTGATCCATAGTCGCAGTGAATTGAGAGACCAGATCGATCCAATTCCGACCTGTGAAATCGTCTTGCGCCATATGTACTGAGATTGTTCGGGAGACATGGCGAAAAAAGAAGAAAGTTTTCAGTTCCGTGGCCTATTCATTTCATTAGCATTTTTTTGAGGATTCCAGCCCGAGAAGAACGAGAAGAAAATGTATGGGAAAATCATATGCAAAATATATCATAATTATTGCCCATTATTCTTTCTTCTTTAGAAAGATCCGAAGGCCAAATTTTCGGAATAGGCGGTCTCTGACTTTCCTTTTTCGTACTAATCCTTATATCAAAGATCTTTCAAAAATCTCAAAAAATCTTTTCAAAGGAAGGGCTTCCTTTTTCTTGTTCTTTCTTTCCTCATTCTCTCCTTGACCTCCATAGTCCTCTACTTAATACGACAAAATCTCACTACTCTTTTTTTCTAGTATTTTTGTATTAACCACGGGCGGCTTGGTTCTCACCACTTGTTCTTTTGTTGATGATCCATCCGCTTCTTCGGAGGATTCCTTCGACCTCCAGGTCCTCTCGGAGCCTTGGCCCGTAACTCCAAATAGCGCGGAAGAAACCTCTCTTTTTAATAGAATCAGACGATTAGAAAGAGAGGATTGTATCTTTCTGCTGGGAAGGGGTCCAGGTCTATTCTGGAGGGAATCTGTGAAGAGGACTCTTGATTCTTATACAACTCAGGAGGACTACGATTTCTTCCTCGAGTTCTCAAAGAGAGATCTGGAGATCCGGGAGCTGAGACACTCCTGTTATCAAAAGTTTTTTGAACTTCTTAATGAGAACCCTGACCTCGTGGAGAAAGCCCCCTGCGATCCAAAGAATTGCCTTATCCATTTCTTGGAAGAGAAGCGCGGCGAGCTGGACTCCTTTACGGAGTTGAGCGTCAAAAAAAGAGACAGAGAAGAAATCGAATTTCTAGAAGTGGAGAAAAATTGTTTTTGA

mRNA sequence

ATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTAAGAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGAGGTTCGGGTAAGACCTCACCCAGACTGTCTCAGTTTCACCATCACGAGGACGAAAGAGTACAAACCCACCATTCCCACGGGGCGATCTTCAGAGACGCCCACTGCACCTGGGAATCTTTCTCTTGACTTCAAGGCCCAGCCCTTCATGAAAGGCCAGCCCTTCATTAGTCAAGGGAATGAGAAGGCCCACGGAGCGGTATACCAGCGGGAGCGGGGGATAAGTGGAATTCCCCCATTCAAGGAAGAAGATGGGAATCGAGTGAGGATCTCTTCTCGCTGTGCTCGCATAGCTCTTGGTCTTCTGGTTACGGGCTATTCATTTTTGATGAAAGAAGTAGGATCACCGAAGCGACTGGAAGGCGCAAAGAATATTGCGTTGATGAGTGCAAGGCTTCAAGATTTTTCTACCGCACCTATTTTTGTATTAACCACGGGCGGCTTGGTTCTCACCACTTGTTCTTTTGTTGATGATCCATCCGCTTCTTCGGAGGATTCCTTCGACCTCCAGGTCCTCTCGGAGCCTTGGCCCGTAACTCCAAATAGCGCGGAAGAAACCTCTCTTTTTAATAGAATCAGACGATTAGAAAGAGAGGATTGTATCTTTCTGCTGGGAAGGGGTCCAGGTCTATTCTGGAGGGAATCTGTGAAGAGGACTCTTGATTCTTATACAACTCAGGAGGACTACGATTTCTTCCTCGAGTTCTCAAAGAGAGATCTGGAGATCCGGGAGCTGAGACACTCCTGTTATCAAAAGTTTTTTGAACTTCTTAATGAGAACCCTGACCTCGTGGAGAAAGCCCCCTGCGATCCAAAGAATTGCCTTATCCATTTCTTGGAAGAGAAGCGCGGCGAGCTGGACTCCTTTACGGAGTTGAGCGTCAAAAAAAGAGACAGAGAAGAAATCGAATTTCTAGAAGTGGAGAAAAATTGTTTTTGA

Coding sequence (CDS)

ATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTAAGAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGAGGTTCGGGTAAGACCTCACCCAGACTGTCTCAGTTTCACCATCACGAGGACGAAAGAGTACAAACCCACCATTCCCACGGGGCGATCTTCAGAGACGCCCACTGCACCTGGGAATCTTTCTCTTGACTTCAAGGCCCAGCCCTTCATGAAAGGCCAGCCCTTCATTAGTCAAGGGAATGAGAAGGCCCACGGAGCGGTATACCAGCGGGAGCGGGGGATAAGTGGAATTCCCCCATTCAAGGAAGAAGATGGGAATCGAGTGAGGATCTCTTCTCGCTGTGCTCGCATAGCTCTTGGTCTTCTGGTTACGGGCTATTCATTTTTGATGAAAGAAGTAGGATCACCGAAGCGACTGGAAGGCGCAAAGAATATTGCGTTGATGAGTGCAAGGCTTCAAGATTTTTCTACCGCACCTATTTTTGTATTAACCACGGGCGGCTTGGTTCTCACCACTTGTTCTTTTGTTGATGATCCATCCGCTTCTTCGGAGGATTCCTTCGACCTCCAGGTCCTCTCGGAGCCTTGGCCCGTAACTCCAAATAGCGCGGAAGAAACCTCTCTTTTTAATAGAATCAGACGATTAGAAAGAGAGGATTGTATCTTTCTGCTGGGAAGGGGTCCAGGTCTATTCTGGAGGGAATCTGTGAAGAGGACTCTTGATTCTTATACAACTCAGGAGGACTACGATTTCTTCCTCGAGTTCTCAAAGAGAGATCTGGAGATCCGGGAGCTGAGACACTCCTGTTATCAAAAGTTTTTTGAACTTCTTAATGAGAACCCTGACCTCGTGGAGAAAGCCCCCTGCGATCCAAAGAATTGCCTTATCCATTTCTTGGAAGAGAAGCGCGGCGAGCTGGACTCCTTTACGGAGTTGAGCGTCAAAAAAAGAGACAGAGAAGAAATCGAATTTCTAGAAGTGGAGAAAAATTGTTTTTGA

Protein sequence

MGNYHVRFGERWDRQDPARCKLFLSIAGQMTKRIIIGLLYLNSPFRTLYRSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEEVRVRPHPDCLSFTITRTKEYKPTIPTGRSSETPTAPGNLSLDFKAQPFMKGQPFISQGNEKAHGAVYQRERGISGIPPFKEEDGNRVRISSRCARIALGLLVTGYSFLMKEVGSPKRLEGAKNIALMSARLQDFSTAPIFVLTTGGLVLTTCSFVDDPSASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLGRGPGLFWRESVKRTLDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVEKAPCDPKNCLIHFLEEKRGELDSFTELSVKKRDREEIEFLEVEKNCF

Homology

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BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: AEN56122.1 (putative ATP synthase F1 subunit 1 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 184.5 bits (467), Expect = 7.3e-43
Identity = 93/161 (57.76%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 252 SFVDDPSA--------SSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLG 311
           +F D+PS+          EDSF LQVLSEPWPVTPN+AEETSL NRIRRLE +D IFLLG
Sbjct: 298 TFFDNPSSXXXXXXXXXXEDSFALQVLSEPWPVTPNTAEETSLQNRIRRLEEDDSIFLLG 357

Query: 312 RGPGLFWRESVKRTLDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVE 371
           + PGLFW + ++  L SY+TQE+Y F+LEFSKRDLEIREL++S Y  F   LN +P L E
Sbjct: 358 KAPGLFWTDCIQSQLYSYSTQEEYSFYLEFSKRDLEIRELKNSSYSLFSLFLNFDPHLSE 417

Query: 372 KAPCDPKNCLIHFLEEKRGELDSFTELSVKKRDREEIEFLE 405
           +AP +P+ C + FLEE   E+     L+V++R REEIEFL+
Sbjct: 418 EAPYNPRECFLDFLEEWNHEMSRIPGLTVEERQREEIEFLQ 458

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BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: XP_017985372.1 (PREDICTED: uncharacterized mitochondrial protein AtMg01280-like [Theobroma cacao])

HSP 1 Score: 139.0 bits (349), Expect = 3.5e-29
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 258 SASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLGRGPGLFWRESVKRT 317
           ++SSEDSF LQVLSEPWPVT N A E+S+ NRI  +E  +CIFLL +  G++W E V+ +
Sbjct: 124 NSSSEDSFGLQVLSEPWPVTHNIALESSMRNRILTMENTNCIFLLDKDRGVYWAE-VQNS 183

Query: 318 LDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVEKAPCDPKNCLIHFL 377
           LD+ ++Q++Y+  +E   RDL+IREL+H CY  F ++L E+P L E A   PK   I FL
Sbjct: 184 LDNCSSQKEYNQLIELENRDLQIRELKHECYSLFQQMLTEHPALAENA---PKEAFIDFL 243

Query: 378 EEKRGELDSFTELSVKKRDREEIEFLEV 406
           +EKR ELD      + K D+ E+EFL V
Sbjct: 244 DEKRDELDQQGGNRLVK-DQRELEFLNV 266

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BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: XP_018628934.1 (PREDICTED: uncharacterized protein LOC108946483 [Nicotiana tomentosiformis])

HSP 1 Score: 134.4 bits (337), Expect = 8.6e-28
Identity = 77/124 (62.10%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 1   MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTKRIIIGLLYLN------------SP-- 60
           MGNYHVRFGERWDR     +RCKLFLSIAGQMT    +    ++            SP  
Sbjct: 76  MGNYHVRFGERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFSVPSPST 135

Query: 61  ----------FRTLYRSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDI 99
                     F     SNGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDI
Sbjct: 136 FTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDI 195

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BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: XP_016435338.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana tabacum])

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 75/124 (60.48%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 1   MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTKRIIIGLLYLN---------------- 60
           MGNYHVRFGERWDR     +RCKLFLSIAGQMT    +    ++                
Sbjct: 75  MGNYHVRFGERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFSVPAPST 134

Query: 61  --------SPFRTLYRSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDI 99
                     F     SNGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDI
Sbjct: 135 YTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDI 194

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BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: AMR36233.1 (hypothetical protein (mitochondrion) [Nicotiana undulata] >AMR36235.1 hypothetical protein (mitochondrion) [Nicotiana tabacum] >AMR36237.1 hypothetical protein (mitochondrion) [Nicotiana tabacum])

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-27
Identity = 88/221 (39.82%), Postives = 118/221 (53.39%), Query Frame = 0


Query: 184 NRVRISSRCARIALGLLVTGYSFLMKEVGSPKRLEGAKNIALMSARLQDFSTAPIFVLTT 243
           NR R++ +     L ++     F +   G   R     N+ +    L  FS   +F + +
Sbjct: 54  NRFRLNQKSGFRLLYIIYISILFSISLFGCCLRTYFLSNLCVYFLDL--FSFFAVFSVVS 113

Query: 244 GGLVLTTCSFVDDPS-ASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLL 303
           GG           PS +SSEDSF+LQVLSEPWPVT N A E S+ NR+  LE+E   FLL
Sbjct: 114 GGGQPLPLPGPSTPSNSSSEDSFELQVLSEPWPVTHNVALEASMRNRLLALEQEKSPFLL 173

Query: 304 GRGPGLFWRESVKRTLDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLV 363
               G  W E VK  LD+  +Q +Y+  LEF  RDL+IRE RHSCY  + E+L  +P + 
Sbjct: 174 SEERGSNWAE-VKTQLDNCPSQREYNRLLEFENRDLQIREKRHSCYSIYQEILTAHPAVA 233

Query: 364 EKAPCDPKNCLIHFLEEKRGELDSFTELSVKKRDREEIEFL 404
           E A  +P+     FL EKR ELD     +V  RD+ E+ FL
Sbjct: 234 ENADSNPQEAFCDFLNEKRSELD-LQGGAVFVRDQRELRFL 270

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BLAST of CsaV3_UNG208550 vs. TAIR10
Match: ATMG01280.1 (Cytochrome C oxidase subunit II-like, transmembrane domain)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-26
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 258 SASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLGRGPGLFWRESVKRT 317
           ++SSEDSF L+VLSEPWP+T N   E+S+ NRIR LE  +  FLLG+  G +W E ++  
Sbjct: 123 TSSSEDSFGLRVLSEPWPITRNLGLESSICNRIRLLEAANSPFLLGKEKGQYWGE-IQEC 182

Query: 318 LDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVEKAPCDPKNCLIHFL 377
           L + + Q +Y   L+F  RDL+IRE +HSC + F  +L  NP L E+A   P+     FL
Sbjct: 183 LYNVSEQREYYRLLDFENRDLQIRERKHSCLEVFRGVLLRNPYLEERAAYSPQEAFFDFL 242

Query: 378 EEKRGELD-SFTELSVKKRDREEIEFL-EVEKN 409
            E+R  LD S    S  + DR EI FL E+E++
Sbjct: 243 NERRDALDISNPGSSPAEMDRLEILFLGEIERD 274

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BLAST of CsaV3_UNG208550 vs. TAIR10
Match: AT2G07695.1 (Cytochrome C oxidase subunit II-like, transmembrane domain)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26
Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 258 SASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLGRGPGLFWRESVKRT 317
           ++SSEDSF L VLSEPWP+T N   E+S+ NRIR LE  +  FLLG+  G +W E ++  
Sbjct: 123 TSSSEDSFGLSVLSEPWPITRNLGLESSICNRIRLLEAANSPFLLGKEKGQYWGE-IQEC 182

Query: 318 LDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVEKAPCDPKNCLIHFL 377
           L + + Q +Y   L+F  RDL+IRE +HSC + F  +L  NP L E+A   P+     FL
Sbjct: 183 LYNVSEQREYYRLLDFENRDLQIRERKHSCLEVFRGVLLRNPYLEERAAYSPQEAFFDFL 242

Query: 378 EEKRGELD-SFTELSVKKRDREEIEFL-EVEKN 409
            E+R  LD S    S  + DR EI FL E+E++
Sbjct: 243 NERRDALDISNPGSSPAEMDRLEILFLGEIERD 274

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BLAST of CsaV3_UNG208550 vs. TAIR10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-20
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 51  SNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 99
           SNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIV GE
Sbjct: 344 SNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVFGE 391

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BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|P92559|M1280_ARATH (Uncharacterized mitochondrial protein AtMg01280 OS=Arabidopsis thaliana OX=3702 GN=AtMg01280 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.1e-25
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 258 SASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLGRGPGLFWRESVKRT 317
           ++SSEDSF L+VLSEPWP+T N   E+S+ NRIR LE  +  FLLG+  G +W E ++  
Sbjct: 123 TSSSEDSFGLRVLSEPWPITRNLGLESSICNRIRLLEAANSPFLLGKEKGQYWGE-IQEC 182

Query: 318 LDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVEKAPCDPKNCLIHFL 377
           L + + Q +Y   L+F  RDL+IRE +HSC + F  +L  NP L E+A   P+     FL
Sbjct: 183 LYNVSEQREYYRLLDFENRDLQIRERKHSCLEVFRGVLLRNPYLEERAAYSPQEAFFDFL 242

Query: 378 EEKRGELD-SFTELSVKKRDREEIEFL-EVEKN 409
            E+R  LD S    S  + DR EI FL E+E++
Sbjct: 243 NERRDALDISNPGSSPAEMDRLEILFLGEIERD 274

[Close]

BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|Q36450|NDUS2_NICSY (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-18
Identity = 46/48 (95.83%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 51  SNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 99
           SNGSNRPYRRKIRAP  AHSQGLDSMSKHHMPADVVTIIGTQDIVSGE
Sbjct: 344 SNGSNRPYRRKIRAPCFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 391

[Close]

BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|P93306|NDUS2_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 4.4e-15
Identity = 42/48 (87.50%), Postives = 42/48 (87.50%), Query Frame = 0


Query: 51  SNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 99
           SNGSNRPYR KIRAPG AH QGLD MSKHHM ADVVTIIGTQDIV GE
Sbjct: 344 SNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGE 391

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BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|Q9TC96|NDUS2_NEPOL (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13
Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 51  SNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 99
           SNG+NRPYR KIRAPG  H QGLD MSK+HM ADVVTIIGTQDIV GE
Sbjct: 348 SNGTNRPYRCKIRAPGFLHLQGLDMMSKNHMLADVVTIIGTQDIVFGE 395

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BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|Q37619|NDUS2_PROWI (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.7e-12
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 0


Query: 51  SNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 99
           SNG+++PYR KIRAPG AH QGLD M+++HM ADVVTIIGTQDIV GE
Sbjct: 350 SNGTSKPYRCKIRAPGFAHLQGLDFMARNHMLADVVTIIGTQDIVFGE 397

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BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|G3EU37|G3EU37_CUCME (Putative ATP synthase F1 subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=atp1 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.8e-43
Identity = 93/161 (57.76%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 252 SFVDDPSA--------SSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLG 311
           +F D+PS+          EDSF LQVLSEPWPVTPN+AEETSL NRIRRLE +D IFLLG
Sbjct: 298 TFFDNPSSXXXXXXXXXXEDSFALQVLSEPWPVTPNTAEETSLQNRIRRLEEDDSIFLLG 357

Query: 312 RGPGLFWRESVKRTLDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVE 371
           + PGLFW + ++  L SY+TQE+Y F+LEFSKRDLEIREL++S Y  F   LN +P L E
Sbjct: 358 KAPGLFWTDCIQSQLYSYSTQEEYSFYLEFSKRDLEIRELKNSSYSLFSLFLNFDPHLSE 417

Query: 372 KAPCDPKNCLIHFLEEKRGELDSFTELSVKKRDREEIEFLE 405
           +AP +P+ C + FLEE   E+     L+V++R REEIEFL+
Sbjct: 418 EAPYNPRECFLDFLEEWNHEMSRIPGLTVEERQREEIEFLQ 458

[Close]

BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A1S3X6J4|A0A1S3X6J4_TOBAC (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107761612 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.5e-28
Identity = 75/124 (60.48%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 1   MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTKRIIIGLLYLN---------------- 60
           MGNYHVRFGERWDR     +RCKLFLSIAGQMT    +    ++                
Sbjct: 75  MGNYHVRFGERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFSVPAPST 134

Query: 61  --------SPFRTLYRSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDI 99
                     F     SNGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDI
Sbjct: 135 YTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDI 194

[Close]

BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A142I104|A0A142I104_TOBAC (Uncharacterized protein OS=Nicotiana tabacum OX=4097 GN=orf293 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 88/221 (39.82%), Postives = 118/221 (53.39%), Query Frame = 0


Query: 184 NRVRISSRCARIALGLLVTGYSFLMKEVGSPKRLEGAKNIALMSARLQDFSTAPIFVLTT 243
           NR R++ +     L ++     F +   G   R     N+ +    L  FS   +F + +
Sbjct: 54  NRFRLNQKSGFRLLYIIYISILFSISLFGCCLRTYFLSNLCVYFLDL--FSFFAVFSVVS 113

Query: 244 GGLVLTTCSFVDDPS-ASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLL 303
           GG           PS +SSEDSF+LQVLSEPWPVT N A E S+ NR+  LE+E   FLL
Sbjct: 114 GGGQPLPLPGPSTPSNSSSEDSFELQVLSEPWPVTHNVALEASMRNRLLALEQEKSPFLL 173

Query: 304 GRGPGLFWRESVKRTLDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLV 363
               G  W E VK  LD+  +Q +Y+  LEF  RDL+IRE RHSCY  + E+L  +P + 
Sbjct: 174 SEERGSNWAE-VKTQLDNCPSQREYNRLLEFENRDLQIREKRHSCYSIYQEILTAHPAVA 233

Query: 364 EKAPCDPKNCLIHFLEEKRGELDSFTELSVKKRDREEIEFL 404
           E A  +P+     FL EKR ELD     +V  RD+ E+ FL
Sbjct: 234 ENADSNPQEAFCDFLNEKRSELD-LQGGAVFVRDQRELRFL 270

[Close]

BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A142I102|A0A142I102_9SOLA (Uncharacterized protein OS=Nicotiana undulata OX=118713 GN=orf293 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 88/221 (39.82%), Postives = 118/221 (53.39%), Query Frame = 0


Query: 184 NRVRISSRCARIALGLLVTGYSFLMKEVGSPKRLEGAKNIALMSARLQDFSTAPIFVLTT 243
           NR R++ +     L ++     F +   G   R     N+ +    L  FS   +F + +
Sbjct: 54  NRFRLNQKSGFRLLYIIYISILFSISLFGCCLRTYFLSNLCVYFLDL--FSFFAVFSVVS 113

Query: 244 GGLVLTTCSFVDDPS-ASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLL 303
           GG           PS +SSEDSF+LQVLSEPWPVT N A E S+ NR+  LE+E   FLL
Sbjct: 114 GGGQPLPLPGPSTPSNSSSEDSFELQVLSEPWPVTHNVALEASMRNRLLALEQEKSPFLL 173

Query: 304 GRGPGLFWRESVKRTLDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLV 363
               G  W E VK  LD+  +Q +Y+  LEF  RDL+IRE RHSCY  + E+L  +P + 
Sbjct: 174 SEERGSNWAE-VKTQLDNCPSQREYNRLLEFENRDLQIREKRHSCYSIYQEILTAHPAVA 233

Query: 364 EKAPCDPKNCLIHFLEEKRGELDSFTELSVKKRDREEIEFL 404
           E A  +P+     FL EKR ELD     +V  RD+ E+ FL
Sbjct: 234 ENADSNPQEAFCDFLNEKRSELD-LQGGAVFVRDQRELRFL 270

[Close]

BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A075VWM9|A0A075VWM9_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=orf279 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-27
Identity = 73/146 (50.00%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 259 ASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLGRGPGLFWRESVKRTL 318
           +SSEDS DLQVLSEPWPVT N   E+SL NRI RLE  +  FLL +  G +W E VK+ L
Sbjct: 115 SSSEDSSDLQVLSEPWPVTHNVGYESSLRNRIFRLENSNSPFLLSKERGEYWAE-VKKEL 174

Query: 319 DSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVEKAPCDPKNCLIHFLE 378
            +  +Q +Y+  LEF  RDL+IRELRHSCY +F  L  ++P L E A  +P+  L++F  
Sbjct: 175 YNCPSQREYNRLLEFENRDLQIRELRHSCYCQFQRLFTDHPALAENADSNPQEALLYFFN 234

Query: 379 EKRGELDSFTELSVKKRDREEIEFLE 405
           EK  ELD      + K DR E+ FL+
Sbjct: 235 EKGHELDQEGGTPLVK-DRRELRFLD 258

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG208550 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56122.1	7.3e-43	57.76	putative ATP synthase F1 subunit 1 (mitochondrion) [Cucumis melo subsp. melo]	[more]
XP_017985372.1	3.5e-29	50.00	PREDICTED: uncharacterized mitochondrial protein AtMg01280-like [Theobroma cacao...	[more]
XP_018628934.1	8.6e-28	62.10	PREDICTED: uncharacterized protein LOC108946483 [Nicotiana tomentosiformis]	[more]
XP_016435338.1	1.1e-27	60.48	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana...	[more]
AMR36233.1	1.9e-27	39.82	hypothetical protein (mitochondrion) [Nicotiana undulata] >AMR36235.1 hypothetic...	[more]

BLAST of CsaV3_UNG208550 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG01280.1	1.2e-26	45.10	Cytochrome C oxidase subunit II-like, transmembrane domain	[more]
AT2G07695.1	1.5e-26	45.10	Cytochrome C oxidase subunit II-like, transmembrane domain	[more]
ATMG00510.1	1.6e-20	97.92	NADH dehydrogenase subunit 7	[more]

BLAST of CsaV3_UNG208550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P92559\|M1280_ARATH	2.1e-25	45.10	Uncharacterized mitochondrial protein AtMg01280 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q36450\|NDUS2_NICSY	3.2e-18	95.83	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX...	[more]
sp\|P93306\|NDUS2_ARATH	4.4e-15	87.50	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9TC96\|NDUS2_NEPOL	1.8e-13	81.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea O...	[more]
sp\|Q37619\|NDUS2_PROWI	2.7e-12	75.00	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 ...	[more]

BLAST of CsaV3_UNG208550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|G3EU37\|G3EU37_CUCME	4.8e-43	57.76	Putative ATP synthase F1 subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=atp1...	[more]
tr\|A0A1S3X6J4\|A0A1S3X6J4_TOBAC	7.5e-28	60.48	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like OS=Nicotiana tabacum ...	[more]
tr\|A0A142I104\|A0A142I104_TOBAC	1.3e-27	39.82	Uncharacterized protein OS=Nicotiana tabacum OX=4097 GN=orf293 PE=4 SV=1	[more]
tr\|A0A142I102\|A0A142I102_9SOLA	1.3e-27	39.82	Uncharacterized protein OS=Nicotiana undulata OX=118713 GN=orf293 PE=4 SV=1	[more]
tr\|A0A075VWM9\|A0A075VWM9_CAPAN	2.2e-27	50.00	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=orf279 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051287	NAD binding
GO:0016651	oxidoreductase activity, acting on NAD(P)H
GO:0048038	quinone binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR029014	NiFe-Hase_large
IPR038290	NADH_Q_OxRdtase_suD_sf
IPR001135	NADH_Q_OxRdtase_suD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG208550.1	CsaV3_UNG208550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 50..98 e-value: 8.3E-11 score: 41.4
IPR038290	NADH-quinone oxidoreductase, subunit D superfamily	GENE3D	G3DSA:1.10.645.20		coord: 45..101 e-value: 3.6E-11 score: 44.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..77
None	No IPR available	PANTHER	PTHR11993:SF10	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 2, MITOCHONDRIAL	coord: 51..99
None	No IPR available	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 51..99
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	SSF56762	HydB/Nqo4-like	coord: 48..101

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_UNG208550	CmoCh12G007670	Cucurbita moschata (Rifu)	cmocucB0194
CsaV3_UNG208550	Lsi01G010940	Bottle gourd (USVL1VR-Ls)	cuclsiB159

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None