CsaV3_UNG153160 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGCTCTTATTGGCTTGGAAGGTATTTTTGAACATCAGTTTTACTTTTAATCATTCATGTAACCATGTTCCCTGCATCGTCGGGATTTTTATGTTATGCGTACAGTAGCATGTGGCCTGCTGTTTAATCTTCTCTATCTAGTCTCTGTCCAATCTCTATTATCTCAGCCTAGAAGTAGTTGCCCTTCTGTAAAAGAAAAACATTGCATCACATTTATCCTTGCTACTTTCTAGTCTTTCTTTGCCTTGAACAGGTGGTTTTCCTTTGATTAAATTCTGCTCCATAATGTCTAAAGGTGTTTATGCCACATCGTGTATTTCTTCTTCGTGGAAACACGAATCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAGCCAAGTATGGAGACAGAGGTAAGCACGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTAGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGTATATCAGTTCCTTCGTCTAAAAGATCGAAAGGAAAAAAAAATCGTAGGATAATCTTAAATCCGGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAGCTATCCAAAGCCAGAAGATCTGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCTTCTATGAATCCTGGTCTCTCCCCAAATAGAGAGAGGGGCATTGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGGTAACTATAACAAACACTTCCTTAGTTTATTTTAGATGTTAAAACGCGTGTGTGTGTTTGAATCAGGACATCTATATTGTTTCTTTAAAAGATATATTTTAATACAACCCTCCCCTGGTTTGGGGCTTGAGTTTTTTCCTCCTTTTTGGTTATTTCTTGTCATCTATAAAAGCGTTTCTTGTCAGAGATACATTTTTAATGCAATTCTTAGCTAATGAATTAAGTTTTACCGGTGGCAGTCAGTGGGTCCAAAACTTGTTTGAAATATTAAATAGAAGTATATAGTCACTCGACTATTTAAGTTTTGTTGCTTGGACTGCGCCCAGGTTTATGTTAGCCATCTTTATTTGCATAAAAGCATGAGTGTTGTCTGATCCAAGCTGATTATATGTGACATCAACAACTAAGCCATCTGTATTAATACGGATTATGAGCTACTTTGTGGGCCTTCAGAGACCGAGAAACATCAAAATTTTTAGAGGGCGTGAGTTCTTATTTTGATGTTTGGACCCTTAATAGATTCTTTGTTTTTCATCCTTGTTTCTAGACGATTTATAACGATTCTCTTGTTCTTATTTACATCAATCTTTCCCAGTTGCATTGGAAGAAACACATTAATTTCTTCCTCTATTCCTTCCCTCTAGCAAAAGACACTCTGAGATGGACCAAGATTCACGCTTCATCTTCTTATTGGAACCTTTAGCTATGTTAAGACTTCATGCAAATACTTCAAGTAAAAGATTTCACCTTTCTGGTTGCCTTTCCGTATTACATTCACTATTTCCTTTTGGGTTTCAAAATTAATCTTGTGTGTTAATCCAAAGACGAAGATCTCATAGAATGTGGATGAGCTTGTTAGATGGAATACCGAACACCAACTAACTTCTACCTTCTCTTCCATGGAGATTGGAATTAATCCAACTCATTATTGTTAAGGTTGATTCTTTTAATAATATTCCATCTGGCATTCCATCCCTCCTATATTTCAATCATTAGAACCTCCTTGACTTGTGATATCCTAAAACAATATGGGAGATGCTACTTCCGGAAAGGAGATTAGTGGCATGACCCTTGATACGAAGGCTTCTCCATGATAGTGTAGGAGGCATTTGAAGAGCTTTTCCTTCATTGCCCTTCTGTGATGAAGGGTTTGCTTTGTGGCATTAGGTGAACCAATGTGGGCTCAATAGTTTTTTGATGATGTTTGGTTTGTTAGATTCTATGCTTATCTTTGGCTCTTTGTTTCTAGGCCTTTTTAATTATTCGCTGACTTATTTCTCTTGCTTAGAGCCCCTTCTGTATAGGCCCGATAGTTTTTTAATGTCTGTGTATTCTTTTGTTTTTTCTTAACAAAAAGTTTTTTTCTTCTCCATTTCTATATATCTTTTAGGATAAGTATGTTTTGCTTTCTTCTCCTTTTAACTGTTCTTATAGATATAGAAGCTTAACGTATAGATCAAGCCTCATGATATGGTTCTTCTAGCCTTCTAGGGTTTTTTGGTTGCTTGCTGGTTTCCTTCTCCATCGTTCAAGAGTATTGCAATCCCCTCTCCATTTCCATTCTTTTTTTTTCTTCTGTATTTTGTCTTCTTAATCTCTTCTGCAGCTGACTTTACTCTATCCTTCATAGATTCCCTTTCATGTTCCATCTCTTTGACATGGTGAATTTGGTGCTTTAATTCTAAAGTCGACAGAAATAGAGAAAACAAGGACTGATACAGGTCATGTTGTACACGGTACACCGAACTCACTAACTAACAAGTAAAAACTTGTCCAACTTCCTAACTTTCCATCTGTCAACTAACGTAGCATATACTGTTGGACGCTCCAACATTACTCTAGACGTATTTTATAACATAAAGCAAATTGTCTGAACAATCAGTTTGTAACCTTTTCCTTTCGGTTGTCTAGCTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAAAGAGACCCGGTCTTGCAGGAATGATCAGGGTTACACGATAG ATGTCTAAAGGTGTTTATGCCACATCGTGTATTTCTTCTTCGTGGAAACACGAATCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAGCCAAGTATGGAGACAGAGGTAAGCACGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTAGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGTATATCAGTTCCTTCGTCTAAAAGATCGAAAGGAAAAAAAAATCGTAGGATAATCTTAAATCCGGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAGCTATCCAAAGCCAGAAGATCTGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCTTCTATGAATCCTGGTCTCTCCCCAAATAGAGAGAGGGGCATTGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGCTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAAAGAGACCCGGTCTTGCAGGAATGATCAGGGTTACACGATAG ATGTCTAAAGGTGTTTATGCCACATCGTGTATTTCTTCTTCGTGGAAACACGAATCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAGCCAAGTATGGAGACAGAGGTAAGCACGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTAGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGTATATCAGTTCCTTCGTCTAAAAGATCGAAAGGAAAAAAAAATCGTAGGATAATCTTAAATCCGGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAGCTATCCAAAGCCAGAAGATCTGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCTTCTATGAATCCTGGTCTCTCCCCAAATAGAGAGAGGGGCATTGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGCTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAAAGAGACCCGGTCTTGCAGGAATGATCAGGGTTACACGATAG MSKGVYATSCISSSWKHESKYCTSVYGFEKEVLAKYGDRGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKKFDLKLIIRSHEGPDARKRPGLAGMIRVTR
BLAST of CsaV3_UNG153160 vs. NCBI nr
Match: XP_004146184.1 (PREDICTED: serine/threonine-protein phosphatase 7 [Cucumis sativus]) HSP 1 Score: 360.5 bits (924), Expect = 3.5e-96 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. NCBI nr
Match: KGN55588.1 (hypothetical protein Csa_3G000120 [Cucumis sativus]) HSP 1 Score: 360.5 bits (924), Expect = 3.5e-96 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. NCBI nr
Match: XP_008448439.1 (PREDICTED: serine/threonine-protein phosphatase 7 isoform X1 [Cucumis melo]) HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. NCBI nr
Match: XP_008448440.1 (PREDICTED: serine/threonine-protein phosphatase 7 isoform X2 [Cucumis melo]) HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. NCBI nr
Match: XP_022965269.1 (serine/threonine-protein phosphatase 7 [Cucurbita maxima]) HSP 1 Score: 350.1 bits (897), Expect = 4.7e-93 Identity = 167/173 (96.53%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TAIR10
Match: AT5G63870.2 (serine/threonine phosphatase 7) HSP 1 Score: 293.5 bits (750), Expect = 9.5e-80 Identity = 137/174 (78.74%), Postives = 155/174 (89.08%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TAIR10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases) HSP 1 Score: 208.8 bits (530), Expect = 3.1e-54 Identity = 107/184 (58.15%), Postives = 132/184 (71.74%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TAIR10
Match: AT5G10900.1 (Calcineurin-like metallo-phosphoesterase superfamily protein) HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30 Identity = 73/163 (44.79%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TAIR10
Match: AT2G42810.2 (protein phosphatase 5.2) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18 Identity = 55/162 (33.95%), Postives = 82/162 (50.62%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TAIR10
Match: AT2G29400.1 (type one protein phosphatase 1) HSP 1 Score: 69.3 bits (168), Expect = 2.9e-12 Identity = 49/159 (30.82%), Postives = 73/159 (45.91%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. Swiss-Prot
Match: sp|Q9FN02|PPP7_ARATH (Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana OX=3702 GN=PP7 PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 1.7e-78 Identity = 137/174 (78.74%), Postives = 155/174 (89.08%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. Swiss-Prot
Match: sp|Q9LNG5|PPP7L_ARATH (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 5.6e-53 Identity = 107/184 (58.15%), Postives = 132/184 (71.74%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. Swiss-Prot
Match: sp|Q9LEV0|PPP7I_ARATH (Serine/threonine-protein phosphatase 7 inactive homolog OS=Arabidopsis thaliana OX=3702 GN=At5g10900 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29 Identity = 73/163 (44.79%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. Swiss-Prot
Match: sp|Q3SWT6|PPE1_RAT (Serine/threonine-protein phosphatase with EF-hands 1 OS=Rattus norvegicus OX=10116 GN=Ppef1 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.9e-17 Identity = 55/178 (30.90%), Postives = 84/178 (47.19%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. Swiss-Prot
Match: sp|Q84XU2|PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana OX=3702 GN=PAPP5 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.9e-17 Identity = 55/162 (33.95%), Postives = 82/162 (50.62%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TrEMBL
Match: tr|A0A0A0L1I0|A0A0A0L1I0_CUCSA (Serine/threonine-protein phosphatase OS=Cucumis sativus OX=3659 GN=Csa_3G000120 PE=3 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 2.3e-96 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TrEMBL
Match: tr|A0A1S3BJ27|A0A1S3BJ27_CUCME (Serine/threonine-protein phosphatase OS=Cucumis melo OX=3656 GN=LOC103490636 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 8.8e-96 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TrEMBL
Match: tr|A0A1S3BJP4|A0A1S3BJP4_CUCME (Serine/threonine-protein phosphatase OS=Cucumis melo OX=3656 GN=LOC103490636 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 8.8e-96 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TrEMBL
Match: tr|A0A061DKQ5|A0A061DKQ5_THECC (Serine/threonine-protein phosphatase OS=Theobroma cacao OX=3641 GN=TCM_000021 PE=3 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 4.0e-88 Identity = 160/173 (92.49%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of CsaV3_UNG153160 vs. TrEMBL
Match: tr|A0A1R3GC77|A0A1R3GC77_COCAP (Serine/threonine-protein phosphatase OS=Corchorus capsularis OX=210143 GN=CCACVL1_27103 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 8.8e-88 Identity = 160/173 (92.49%), Postives = 162/173 (93.64%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|